mRNA_H-elongata_contig19496.5428.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19496.5428.1
Unique NamemRNA_H-elongata_contig19496.5428.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: D8LE62_ECTSI (GPI inositol-deacylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE62_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 3.480e-150
Identity = 268/526 (50.95%), Postives = 341/526 (64.83%), Query Frame = 1
Query:    1 ARSLGSQASEAKIAARHRRLDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWS-------LQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAAD--------GDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESFHGEGAGARERARVAASTLASSPSSFSEASSKTSARNDGVPKSAGFEKASRAGAHWHMIARSLVTDRLYLVIPTWVYVAGLVLAAALTRGLSSKTVKEQALPPLPLLLMPEENLQWKGIKHAGLSSWISTRPHRTPMVIALAASCGMLVIWVFGGCLADVLSFVPGGLDRVRNALLSVPGGSGAVAVGMAMLRTVD----AVFRFLNPLQGAEDALRL-PNKVRVAV 1518
            ARSLGSQA+  K++   RRLD+F+LD LEE TALHGSL+WR AEFLNHAVE ILALY           A SVM+VGHSLGG+V RAAF LPSYR+GSI+D++TLG+PHDR  W MDYS L +Y+CT+SLWRWHSS PS S  S CW+ S        Q  + D  S +       D +  A   C  P   +  + D  A +        G  GW   +    + L+GDT+LL ++GG +D MVH SLC TDGLG+ GQS +FTT A++ CGFGVDHLA++WCKQL+ R+VA LSELE  H  GAGA+ER RVAA  LAS P S SEA+S      DG P+S GFE+A + G    M+ARSLV+DR+ L +P WVYVA LVLAAALTRGLS+KT KE  L P+PLLL P+ + Q   +++A  S   S R      +  L  SCG L++W+ G    D+ ++ PG ++R  +A+ SVPGG    AVG+  LR ++    ++ R LNPL GA DALRL P+K  +A+
Sbjct:  147 ARSLGSQAAGIKLSGPMRRLDVFSLDFLEECTALHGSLVWRHAEFLNHAVEAILALYTGKGGVP---FADSVMVVGHSLGGVVTRAAFALPSYRLGSITDILTLGSPHDRPPWGMDYSYLSLYKCTDSLWRWHSS-PSDSRSSHCWSGSNGPAFEISQSAAADEDSHQEACFAAGDESETAERGC--PALGTGGLADGSALETAARGSFAGRSGWGGSAGVDAETLLGDTVLLGVAGGLKDFMVHTSLCETDGLGLEGQSASFTTTAMEECGFGVDHLALVWCKQLIGRVVATLSELEVLHRMGAGAKERTRVAAGVLASLPRS-SEATSSA----DGFPRSVGFEEAYKTGDEMLMVARSLVSDRMLLFVPAWVYVACLVLAAALTRGLSAKTAKEGVLLPVPLLLTPDNHFQLGAVRYAWRSLRASIRARGRSAMAGLWLSCGALLVWILGD---DIAAYFPGPMERSLDAVYSVPGG----AVGVTALRWLNGLASSLIRVLNPLDGAGDALRLHPSKGMIAL 654          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A168SXB5_ABSGL (GPI inositol-deacylase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168SXB5_ABSGL)

HSP 1 Score: 109 bits (272), Expect = 1.650e-21
Identity = 77/262 (29.39%), Postives = 112/262 (42.75%), Query Frame = 1
Query:   58 LDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGF--GVDHLAMLWCKQLVNRIVAVL 837
            LD+F +DL EE +A+ G L++ QAE+LN A++ ILA Y D  +Y+ R    SV+++GHS+GG+V R    LP+Y  GSI+ + TL TPH  A  ++D ST  IYR        H S P                                                                          + DTM++S++GG +D+ V+    +      P  S   T  A    G   G DH+A++WC QLV ++ A L
Sbjct:  113 LDVFTVDLNEELSAIAGDLVYDQAEYLNDAIKQILAYYQDIAEYQGRPIPASVIVIGHSMGGVVARIMQHLPNYVPGSINTIFTLATPHSMAPIVLDSSTDMIYRR-------HLSQP--------------------------------------------------------------------------LNDTMVVSVAGGTQDITVNTDAAILP----PSMSTGLTVFATAVPGVWTGCDHMAIMWCNQLVKKVAAAL 289          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A5C5G0V2_9BASI (GPI inositol-deacylase n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G0V2_9BASI)

HSP 1 Score: 105 bits (261), Expect = 4.860e-20
Identity = 84/285 (29.47%), Postives = 124/285 (43.51%), Query Frame = 1
Query:   58 LDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKN-------RSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFT--TEAVDACGFGVDHLAMLWCKQLVNRIV-AVLSELESFHGEGAGARE 882
            LD F LD  ++++A HG  +  QAE+    +  IL+LYA  +D ++       R    +V++VGHS+GG+V RAAF  P Y+  SIS ++T  TPH      +D     +Y    S WR   +  S S                           S  A AAS D + P T +   F               R      + D +L+SI+GG  D+ +         L     S  FT  T A+      VDHLA+LWC+QL++ +   +L+ ++    EG   RE
Sbjct:  163 LDFFTLDFNDDFSAFHGQTLLDQAEYTADCIRYILSLYAAQHDAESPARDRARRPDPTAVILVGHSMGGIVARAAFLSPHYQSHSISTLVTFATPHVVPPVTVDAGVDRVYHAVNSYWRSAYALSSLSS--------------------------SASAGAASYDAITPLTPALRSF---------------RAPPHDELRDLVLVSIAGGLSDVTIASESVSLSSLVPSSGSNGFTVFTTAIPGVHTPVDHLAILWCQQLMHVVAQGLLAIVDVRRAEGVVPRE 406          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A4T0X3Y8_9ASCO (GPI inositol-deacylase n=1 Tax=[Candida] inconspicua TaxID=52247 RepID=A0A4T0X3Y8_9ASCO)

HSP 1 Score: 104 bits (260), Expect = 6.190e-20
Identity = 77/263 (29.28%), Postives = 119/263 (45.25%), Query Frame = 1
Query:   58 LDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSEL 846
            LD F  D  E++TA HG  +  Q+E+LN AV+ IL+LY    + K   +  SV+++GHS+GG+V R   +LP+Y+  S++ +ITL TPH+ A    D   L +Y+ T+  WR        +GF                       + S+L N +         VS  +            K  SRR     + +  LLSI+GG  D  +        GL      +  +T  +      +DHLA++WC QL   +V  L ++
Sbjct:  147 LDFFTADFNEDFTAFHGRTMLDQSEYLNEAVKFILSLYKGNPNIKTYPT--SVILIGHSMGGMVARVMLSLPNYKEDSVNTIITLSTPHNTAPTTFDGDLLNVYKLTDDFWR--------NGF-----------------------VSSNLENNSK--------VSEKLT-----------KVSSRR-----LKNVSLLSITGGTLDTTLPTDYTTLTGLIPKEHGLFVSTTGIPEVWTPIDHLAIVWCDQLRKVLVKTLLQM 352          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A433BPG7_9FUNG (GPI inositol-deacylase n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433BPG7_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 8.190e-20
Identity = 90/291 (30.93%), Postives = 126/291 (43.30%), Query Frame = 1
Query:   52 RRLDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAI----SVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESFHGEGAGARERARVAASTLA 912
            R LD F +D  EE++ALHG  +  QAE+LN A+  IL+LY       +RS+ +    SV+I+GHS+GG+V R  FT+ +Y+ G+I+ +IT+ TPH       D+    IYR     WR      +TSG                             A+A S    AP + SA    P+     V    P        + D  L+SI+GG  D +V       + +  P       T  V     G DH A+LWC QLV  +   L E+      G       R+A   LA
Sbjct:  267 RGLDFFTVDFNEEFSALHGHSLLEQAEYLNDAIVYILSLYPTTRRADSRSAKLPDPTSVIIIGHSMGGVVARTMFTMHNYQPGTINTIITMSTPHLLPPAPFDWKISRIYRDINDFWR---RGYTTSG-----------------------------ASAPS----APLSPSA----PNV----VAHNHP------LSLSDVTLVSIAGGDLDGVVCSDTANVNSIVPPSHGFTVFTTGVPDVWVGSDHPAILWCNQLVKVVARSLLEVVDARQRGQTRPVEQRMAVFRLA 507          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A433QFT5_9FUNG (GPI inositol-deacylase n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QFT5_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 8.450e-20
Identity = 90/291 (30.93%), Postives = 126/291 (43.30%), Query Frame = 1
Query:   52 RRLDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAI----SVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESFHGEGAGARERARVAASTLA 912
            R LD F +D  EE++ALHG  +  QAE+LN A+  IL+LY       +RS+ +    SV+I+GHS+GG+V R  FT+ +Y+ G+I+ +IT+ TPH       D+    IYR     WR      +TSG                             A+A S    AP + SA    P+     V    P        + D  L+SI+GG  D +V       + +  P       T  V     G DH A+LWC QLV  +   L E+      G       R+A   LA
Sbjct:  267 RGLDFFTVDFNEEFSALHGHSLLEQAEYLNDAIVYILSLYPTTRRADSRSAKLPDPTSVIIIGHSMGGVVARTMFTMHNYQPGTINTIITMSTPHLLPPAPFDWKISRIYRDINDFWR---RGYTTSG-----------------------------ASAPS----APLSPSA----PNV----VAHNHP------LSLSDVTLVSIAGGDLDGVVCSDTANVNSIVPPSHGFTVFTTGVPDVWVGSDHPAILWCNQLVKVVARSLLEVVDARQRGQTRPVEQRMAVFRLA 507          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: G8B888_CANPC (GPI inositol-deacylase n=1 Tax=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) TaxID=578454 RepID=G8B888_CANPC)

HSP 1 Score: 103 bits (256), Expect = 1.920e-19
Identity = 87/294 (29.59%), Postives = 128/294 (43.54%), Query Frame = 1
Query:    1 ARSLGSQASEAKIAARH-----RRLDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQS--VAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESFHG 861
            ARS+ ++ SE     R       +LD F +D  E++TA HG  I  QAE+ N AV+ IL LY+  ++        SV+++GHS+GG+V R   TLP Y  GS+ D++TL +PH  +    D     IY   +  W          GF+ C   S   G+             + L++ A E                                   + +  L+SI+GG  D  + P+   T G  +P  +   AFTT  +      +DHLA++WC+QL  RI   L EL S  G
Sbjct:  116 ARSIAARTSELYDELRDVNGYKTKLDFFTIDFNEDFTAFHGRTILDQAEYANEAVKFILDLYSTRSNPPK-----SVIVIGHSMGGIVARIMMTLPDYLPGSVEDILTLSSPHSTSPLTFDGDLSTIYSAVDKFWY--------CGFTNC---STTTGT----------AKLNQLSSVAHE----------------------------------RLQNVALISITGGALDSTL-PADYTTLGYLVPKSNGFTAFTT-GIPQVWTPIDHLAIVWCQQLRTRIALALLELTSLRG 347          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A8J5UEL8_9ASCO (BST1 n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5UEL8_9ASCO)

HSP 1 Score: 102 bits (255), Expect = 2.550e-19
Identity = 78/273 (28.57%), Postives = 109/273 (39.93%), Query Frame = 1
Query:   37 IAARHRRLDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESF 855
            I  + R LD+F  D  E++TA HG  I  QAE+LN AV  I+ LY+     +N   A SV+I+GHS+GG+V R   TLP+Y  GSI+ ++TL +PH  A    D   L IY   +  W          GF            D H + ++       L N +                                          L+SI+GG  D  +         L  P       T  +      +DHLA++WC QL  RI   L E+  +
Sbjct:  137 INPKFRNLDVFTADFNEDFTAFHGRTILDQAEYLNEAVRFIIDLYS-----QNEHPAKSVIIIGHSMGGIVSRVMVTLPNYLEGSINTILTLSSPHAAAPLTFDGDILKIYSAIDRFW--------FDGF------------DPHSTSDYAKLAHDRLKNIS------------------------------------------LISITGGELDSTLPADYTTLSFLVPPTNGFTTFTTGIPLVWSPIDHLAIVWCAQLRRRIAESLLEVVDY 342          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: W6MR92_9ASCO (GPI inositol-deacylase n=1 Tax=Kuraishia capsulata CBS 1993 TaxID=1382522 RepID=W6MR92_9ASCO)

HSP 1 Score: 102 bits (255), Expect = 2.600e-19
Identity = 72/263 (27.38%), Postives = 118/263 (44.87%), Query Frame = 1
Query:   58 LDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQLVNRIVAVLSEL 846
            LD F+ D  E++TA HG  +  QAE+LN A++ IL LY + ++  +     SV+++GHS+GG+V R   +LP+Y+  SI+ +ITL  PH  A    D   L ++  T++ WR        SGF+          + D          ++DL   A++                                   +GD  ++SI+GG  D ++       DGL      +  +T  +      +DHLA++WC QL   +  +L E+
Sbjct:  158 LDFFSADFNEDFTAFHGRTMLDQAEYLNEAIKFILTLYRESDNPVD-----SVILLGHSMGGIVARVMLSLPNYKENSINTIITLAAPHAAAPATFDGDILKVFASTDNFWR--------SGFA----------TGD---------AQTDLEKIATK----------------------------------RLGDVSIVSITGGLSDNILPADYTTLDGLVPSTHGLVVSTTGIPGVWTPIDHLAVVWCDQLRKVVSKMLLEI 354          
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Match: A0A1V2LQ67_PICKU (GPI inositol-deacylase n=1 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A1V2LQ67_PICKU)

HSP 1 Score: 102 bits (254), Expect = 3.030e-19
Identity = 72/252 (28.57%), Postives = 110/252 (43.65%), Query Frame = 1
Query:   58 LDIFALDLLEEWTALHGSLIWRQAEFLNHAVETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISDVITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSLQGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGWKRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTTEAVDACGFGVDHLAMLWCKQL 813
            +D F  D  E++TA HG  +  Q+E+LN AV+ IL+LY D N   + +S  SV+++GHS+GG+V R   +LP+Y  GS++ +ITL TPH+ A    D   L +Y+ T+  WR                                        N  S D     T  A +               +RR ++    +  L+SI+GG  D  +        GL       + +T  +      +DHLA++WC QL
Sbjct:  164 VDFFTADFNEDFTAFHGRTMLDQSEYLNDAVKFILSLY-DSNS--SNTSPTSVILLGHSMGGIVARVMLSLPNYLEGSVNTIITLSTPHNAAPTTFDGDLLNVYKLTDDFWR----------------------------------------NGFSHDVSTLSTKMATI---------------ARRRLE----NVSLISITGGVLDTTLPTDYTSLTGLVPSNHGFSVSTTGIPGVWTPIDHLAIVWCDQL 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19496.5428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE62_ECTSI3.480e-15050.95GPI inositol-deacylase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A168SXB5_ABSGL1.650e-2129.39GPI inositol-deacylase n=1 Tax=Absidia glauca TaxI... [more]
A0A5C5G0V2_9BASI4.860e-2029.47GPI inositol-deacylase n=1 Tax=Rhodotorula diobova... [more]
A0A4T0X3Y8_9ASCO6.190e-2029.28GPI inositol-deacylase n=1 Tax=[Candida] inconspic... [more]
A0A433BPG7_9FUNG8.190e-2030.93GPI inositol-deacylase n=2 Tax=Jimgerdemannia flam... [more]
A0A433QFT5_9FUNG8.450e-2030.93GPI inositol-deacylase n=1 Tax=Jimgerdemannia flam... [more]
G8B888_CANPC1.920e-1929.59GPI inositol-deacylase n=1 Tax=Candida parapsilosi... [more]
A0A8J5UEL8_9ASCO2.550e-1928.57BST1 n=1 Tax=[Candida] subhashii TaxID=561895 RepI... [more]
W6MR92_9ASCO2.600e-1927.38GPI inositol-deacylase n=1 Tax=Kuraishia capsulata... [more]
A0A1V2LQ67_PICKU3.030e-1928.57GPI inositol-deacylase n=1 Tax=Pichia kudriavzevii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19496contigH-elongata_contig19496:1901..5624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.3
Seed ortholog evalue1.1e-129
Seed eggNOG ortholog2880.D8LE62
KEGG koko:K03263,ko:K05294
KEGG Pathwayko00563,ko01100,map00563,map01100
EggNOG free text desc.phosphatidylinositol deacylase activity
EggNOG OGsKOG3724@1,KOG3724@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGPI inositol-deacylase PGAP1-like
Ec32 orthologEc-00_001080.1
Exons8
Model size1518
Cds size1518
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19496.5428.1prot_H-elongata_contig19496.5428.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19496 1901..5624 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930108.6177373-CDS-H-elongata_contig19496:1900..20261622930108.6177373-CDS-H-elongata_contig19496:1900..2026Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 1901..2026 +
1691679283.5430272-CDS-H-elongata_contig19496:1900..20261691679283.5430272-CDS-H-elongata_contig19496:1900..2026Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 1901..2026 +
1622930108.6335034-CDS-H-elongata_contig19496:2346..24741622930108.6335034-CDS-H-elongata_contig19496:2346..2474Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 2347..2474 +
1691679283.5545425-CDS-H-elongata_contig19496:2346..24741691679283.5545425-CDS-H-elongata_contig19496:2346..2474Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 2347..2474 +
1622930108.653031-CDS-H-elongata_contig19496:2883..29911622930108.653031-CDS-H-elongata_contig19496:2883..2991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 2884..2991 +
1691679283.5641396-CDS-H-elongata_contig19496:2883..29911691679283.5641396-CDS-H-elongata_contig19496:2883..2991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 2884..2991 +
1622930108.672589-CDS-H-elongata_contig19496:3420..34961622930108.672589-CDS-H-elongata_contig19496:3420..3496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 3421..3496 +
1691679283.5735598-CDS-H-elongata_contig19496:3420..34961691679283.5735598-CDS-H-elongata_contig19496:3420..3496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 3421..3496 +
1622930108.6858945-CDS-H-elongata_contig19496:3598..39811622930108.6858945-CDS-H-elongata_contig19496:3598..3981Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 3599..3981 +
1691679283.5832772-CDS-H-elongata_contig19496:3598..39811691679283.5832772-CDS-H-elongata_contig19496:3598..3981Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 3599..3981 +
1622930108.7032268-CDS-H-elongata_contig19496:4254..43561622930108.7032268-CDS-H-elongata_contig19496:4254..4356Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 4255..4356 +
1691679283.5927236-CDS-H-elongata_contig19496:4254..43561691679283.5927236-CDS-H-elongata_contig19496:4254..4356Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 4255..4356 +
1622930108.7197664-CDS-H-elongata_contig19496:4626..48221622930108.7197664-CDS-H-elongata_contig19496:4626..4822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 4627..4822 +
1691679283.6106665-CDS-H-elongata_contig19496:4626..48221691679283.6106665-CDS-H-elongata_contig19496:4626..4822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 4627..4822 +
1622930108.7323315-CDS-H-elongata_contig19496:5225..56241622930108.7323315-CDS-H-elongata_contig19496:5225..5624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 5226..5624 +
1691679283.6254766-CDS-H-elongata_contig19496:5225..56241691679283.6254766-CDS-H-elongata_contig19496:5225..5624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19496 5226..5624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19496.5428.1

>prot_H-elongata_contig19496.5428.1 ID=prot_H-elongata_contig19496.5428.1|Name=mRNA_H-elongata_contig19496.5428.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
ARSLGSQASEAKIAARHRRLDIFALDLLEEWTALHGSLIWRQAEFLNHAV
ETILALYADGNDYKNRSSAISVMIVGHSLGGLVVRAAFTLPSYRIGSISD
VITLGTPHDRAAWMMDYSTLGIYRCTESLWRWHSSFPSTSGFSRCWNWSL
QGGSDDHKSREFPYCLKSDLANAASEDCVAPQTVSAVVFDPDAADGDVGW
KRPSRRTVDALIGDTMLLSISGGPEDLMVHPSLCVTDGLGMPGQSVAFTT
EAVDACGFGVDHLAMLWCKQLVNRIVAVLSELESFHGEGAGARERARVAA
STLASSPSSFSEASSKTSARNDGVPKSAGFEKASRAGAHWHMIARSLVTD
RLYLVIPTWVYVAGLVLAAALTRGLSSKTVKEQALPPLPLLLMPEENLQW
KGIKHAGLSSWISTRPHRTPMVIALAASCGMLVIWVFGGCLADVLSFVPG
GLDRVRNALLSVPGGSGAVAVGMAMLRTVDAVFRFLNPLQGAEDALRLPN
KVRVAV
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mRNA from alignment at H-elongata_contig19496:1901..5624+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19496.5428.1 ID=mRNA_H-elongata_contig19496.5428.1|Name=mRNA_H-elongata_contig19496.5428.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3724bp|location=Sequence derived from alignment at H-elongata_contig19496:1901..5624+ (Himanthalia elongata Himel1 dioecious)
GCACGATCTCTGGGATCTCAGGCGTCAGAGGCAAAGATTGCCGCCCGCCA CAGACGATTGGATATTTTTGCGCTGGACTTGCTGGAGGAGTGGACAGCCT TACACGGGTCACTGATCTGGAGACAGGTGAACTCCGGCTCCAAGCTCATA ATAAGGGTATGATTAGTATGATAATAGCCGTTTAGCAGCTGTAAGCTTTT GCCCACAATGCTTTAGTGTCCGTTAATAAAAATGCTAATATTACAAAACT TGAGAGCACTTTATTGCTCTTGTGGTTGGAGTTGAAATGTATACCCTCTT GTTTCTTCTCTTCACATAATGCTGGAAGCTTAGAACGAAGAAGGCTCCTT ACAGTAGATCTATAGCTACTCTACATGGAGGCGATGGGGCACCAGTCAAC AGTGCGGCGTCCCACTTGACTTGACTTGGCCGTCTCCTTATACCAGGCGG AGTTCTTAAACCACGCCGTGGAGACCATCCTCGCTTTGTACGCAGATGGC AACGATTACAAAAATCGGTCTTCCGCTATATCGGTGATGATTGTTGGGCA TTCGCTGGGAGGATTGGTGGTCAGGTGCGGCATCGTGTAATGGTGTTTTC GTGTTGAAACTTCCTTGACGAGGTCTATTCTCTTTCGCACTGTAAAGTTG GATATAAGAGGCGTAAACCGACGGAGCGGCTTTTTATTGTCTTCGCCAAC GAAAATGTATTAAGCGTGCTACAGAAAAATAAAAAAAAATGCCAACATTT GGCCGAGGCCATTGGGTGTTAATCAGTACTAGTACAGGCAAGACGAGCCC TCCGAAGAAGCGTGAGGATTTACGAATGGTACAAGACACGAATCGGTTTT TGTTTTCTTCGCCCGCGTCCGCCATCCTGTATCCATCCTATATCGCTTTG TTTTTTATCCTGATCTTGATCTTGATCTTGCCCTGTTGTTTTCCGTGGTG TTGTTATGTATGATCTATTGATGTGTTGGTCAGGGCCGCCTTCACGCTCC CCTCTTACCGAATTGGATCAATCTCTGACGTCATCACCCTCGGTACCCCG CACGATCGAGCCGCTTGGATGATGGACTACTCGACTCTCGGGTGTGCTTT AATATTATTATTATATTTATTTATTCATTTTTTCATTTATTCATTTTTAC GGATCTAGGACTAATCATTCACTTGTGTATCGATATCTCCCGATTTTGTC AAGAAAGAGATAAACCATTAGATTGATGCGACTTTGCGCAGTGTACTCTC GAGGAGTGCCATCAAGATGTGTGACCCAGTCTAGGCACATAGATCGGGAG CGGATAACGCGTTAAACGCGCGTCGAAGTGACATCACCTGTCGAGTTAGC TGACACGTAGTTCCGCGTGCAAGCCTTACGTTGGCCGACCCACTTGCTCG TATAATAGCACAAACCAACATATTGGTAATATACTCCTAGATCTTATCAT GTTGTGATGTGCTCCCTCTTTCGACTCTTTTGGCCGTCCGTCCGTCTGTT CGGTCGAAAAATACAAAAAGCATCTACCGTTGCACGGAGTCGCTGTGGAG ATGGCACTCCTCCTTCCCATCCACCTCGGGTTTCTCTCGCTGCTGGGTGC ATCCGAAGCCCGCAACAGACAAGACTATCCTGGCGCCTCCCATTCCAGCC AGTGGGAAAGACGAAATGAGAACAGTGGAAACCCTCGACCTCGACGAGAA TTGGTCGTTACAGGGTGGTTCTGACGATCACAAGTCTAGGGAGTTTCCTT ATTGTTTGAAGAGCGACTTGGCGAATGCGGCCAGCGAGGACTGTGTCGCG CCTCAAACGGTTTCTGCGGTGGTTTTTGACCCCGATGCAGCCGACGGAGA TGTGGGATGGAAGCGTCCGTCTCGCAGAACCGTGGACGCCCTGATTGGCG ACACGATGCTCTTGAGTATATCTGGTGGGCCGGAAGACCTGATGGTACAT CCGTCTCTGTGCGTGACAGATGGGCTGGGAATGCCGGGGCAGAGCGTCGC GTTTACGACCGAGGCAGTGGACGCGTGCGGCTTCGGCGTAGACCATCTGG CAATGCTATGGTGCAAACAGCTCGTGAATCGGTGAGGCTGGACTGTAGTA AAAACAGAGAAAGTTTCGTGCCGTTGGAGTTAAGTGTGTCGATCCGGTTT TATGGAAGGTACTTCCAGTCGAGCTATCGAGAACGGTGGCCCGAAGCTGC ACACCGCCATCAAATAGAGACACCGCGGTGTTAATTGTTGTCAGATGACG TTGGTGGAAAATGTCGTCCATATGAGATGATAGCTCCCTTCGAACAGAGT TAGGAGGGTCCAATGATACATCGACTGTTCGTACAACCACGATATCCCTG TTAGGATTGTCGCTGTTCTCTCGGAGCTGGAAAGTTTCCATGGCGAAGGC GCCGGAGCGAGAGAGAGAGCTCGTGTGGCCGCCAGTACGTTGGCATCATC ACCAAGGTGCGCCGTCGCACCGACCTCTCGAATTATCTAAATATTATCTC AGCGCTGAGTCGAAACAAAAGTAGTTCCGCTTTGTCGCTTGGTAAATATC ACTATTGGTCAATGAAGCGGAGCACGGGTGGAAAGTTTTGTCGACTCGAA GCTAAAGCTAAAGTCATTCTTTACTGACAATGATAGGTGGGCCCGCCGCA CGATTTACTCATCAATCGCATAACCTTGACCCACGAAGGCTGTCGTTTTA CCCCCTCGTCCGTACCTCATAACCAGTTCCTTCTCTGAAGCCTCGAGCAA GACAAGCGCTAGGAACGACGGCGTGCCCAAGTCGGCAGGTTTTGAGAAGG CTTCCCGAGCTGGCGCACATTGGCACATGATTGCGAGGTCCCTGGTAACG GACCGTCTTTACCTGGTCATTCCCACTTGGGTCTACGTTGCGGGCCTGGT TCTTGCTGCAGCTCTCACCAGGGTGGGTGGTTCCCGCTGTAGTAGAGGTG TCATCGGTAAAGATTACGATTACGGCGCATGGATGTACCTTTTATTAGTT TGTGCGGGCACTGTAGCGGTACACGTCGGGGACCTGTGGTGTGGTGTAAT ACATATTTCGGAGGGGTCGACCTTCACCGCTCCGCTGCCGACGAATAATC TGTCCACCACGCTGTTTCATTACATCCTTTATCATATCATAAGGTTGCGC ACCGTCACGTTCTTACAGCAACGGATGTTCGGAGAGTGAGAATGAGCCTA AAGTCTTTTAAATAAAAACAATATTTTTTTATTTTCTTGTCTTGGTGTCG CGGAACTCCTTTTTTCTCTTTGCGTTTTTTTTTTTATTTTTTTCTTTTCT TTTCTTCTTGTACATGCCACTGCAGGGCCTATCATCCAAAACCGTCAAGG AGCAGGCTCTTCCGCCCTTGCCCTTGCTGCTGATGCCAGAGGAAAACCTT CAGTGGAAGGGAATCAAGCACGCGGGGCTCTCTTCGTGGATCTCCACGCG CCCTCACAGAACTCCGATGGTCATTGCGTTGGCAGCGTCGTGCGGTATGC TAGTTATCTGGGTCTTCGGCGGTTGTCTCGCGGATGTTTTGAGTTTTGTG CCGGGAGGCCTAGATCGTGTCCGTAACGCACTCTTGTCTGTCCCCGGAGG ATCGGGGGCTGTCGCGGTGGGGATGGCCATGCTCCGCACGGTGGATGCCG TGTTTCGGTTCCTGAACCCGCTCCAAGGCGCCGAAGACGCCCTACGCTTA CCAAACAAGGTAAGAGTTGCGGTC
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Coding sequence (CDS) from alignment at H-elongata_contig19496:1901..5624+

>mRNA_H-elongata_contig19496.5428.1 ID=mRNA_H-elongata_contig19496.5428.1|Name=mRNA_H-elongata_contig19496.5428.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3036bp|location=Sequence derived from alignment at H-elongata_contig19496:1901..5624+ (Himanthalia elongata Himel1 dioecious)
GCACGATCTCTGGGATCTCAGGCGTCAGAGGCAAAGATTGCCGCCCGCCA
CAGACGATTGGATATTTTTGCGCTGGACTTGCTGGAGGAGTGGACAGCCT
TACACGGGTCACTGATCTGGAGACAGGCACGATCTCTGGGATCTCAGGCG
TCAGAGGCAAAGATTGCCGCCCGCCACAGACGATTGGATATTTTTGCGCT
GGACTTGCTGGAGGAGTGGACAGCCTTACACGGGTCACTGATCTGGAGAC
AGGCGGAGTTCTTAAACCACGCCGTGGAGACCATCCTCGCTTTGTACGCA
GATGGCAACGATTACAAAAATCGGTCTTCCGCTATATCGGTGATGATTGT
TGGGCATTCGCTGGGAGGATTGGTGGTCAGGCGGAGTTCTTAAACCACGC
CGTGGAGACCATCCTCGCTTTGTACGCAGATGGCAACGATTACAAAAATC
GGTCTTCCGCTATATCGGTGATGATTGTTGGGCATTCGCTGGGAGGATTG
GTGGTCAGGGCCGCCTTCACGCTCCCCTCTTACCGAATTGGATCAATCTC
TGACGTCATCACCCTCGGTACCCCGCACGATCGAGCCGCTTGGATGATGG
ACTACTCGACTCTCGGGGCCGCCTTCACGCTCCCCTCTTACCGAATTGGA
TCAATCTCTGACGTCATCACCCTCGGTACCCCGCACGATCGAGCCGCTTG
GATGATGGACTACTCGACTCTCGGCATCTACCGTTGCACGGAGTCGCTGT
GGAGATGGCACTCCTCCTTCCCATCCACCTCGGGTTTCTCTCGCTGCTGG
CATCTACCGTTGCACGGAGTCGCTGTGGAGATGGCACTCCTCCTTCCCAT
CCACCTCGGGTTTCTCTCGCTGCTGGAATTGGTCGTTACAGGGTGGTTCT
GACGATCACAAGTCTAGGGAGTTTCCTTATTGTTTGAAGAGCGACTTGGC
GAATGCGGCCAGCGAGGACTGTGTCGCGCCTCAAACGGTTTCTGCGGTGG
TTTTTGACCCCGATGCAGCCGACGGAGATGTGGGATGGAAGCGTCCGTCT
CGCAGAACCGTGGACGCCCTGATTGGCGACACGATGCTCTTGAGTATATC
TGGTGGGCCGGAAGACCTGATGGTACATCCGTCTCTGTGCGTGACAGATG
GGCTGGGAATGCCGGGGCAGAGCGTCGCGTTTACGACCGAGGCAGTGGAC
GCGTGCGGCTTCGGCGTAGACCATCTGGCAATGCTATGGTGCAAACAGCT
CGTGAATCGAATTGGTCGTTACAGGGTGGTTCTGACGATCACAAGTCTAG
GGAGTTTCCTTATTGTTTGAAGAGCGACTTGGCGAATGCGGCCAGCGAGG
ACTGTGTCGCGCCTCAAACGGTTTCTGCGGTGGTTTTTGACCCCGATGCA
GCCGACGGAGATGTGGGATGGAAGCGTCCGTCTCGCAGAACCGTGGACGC
CCTGATTGGCGACACGATGCTCTTGAGTATATCTGGTGGGCCGGAAGACC
TGATGGTACATCCGTCTCTGTGCGTGACAGATGGGCTGGGAATGCCGGGG
CAGAGCGTCGCGTTTACGACCGAGGCAGTGGACGCGTGCGGCTTCGGCGT
AGACCATCTGGCAATGCTATGGTGCAAACAGCTCGTGAATCGGATTGTCG
CTGTTCTCTCGGAGCTGGAAAGTTTCCATGGCGAAGGCGCCGGAGCGAGA
GAGAGAGCTCGTGTGGCCGCCAGTACGTTGGCATCATCACCAAGGATTGT
CGCTGTTCTCTCGGAGCTGGAAAGTTTCCATGGCGAAGGCGCCGGAGCGA
GAGAGAGAGCTCGTGTGGCCGCCAGTACGTTGGCATCATCACCAAGTTCC
TTCTCTGAAGCCTCGAGCAAGACAAGCGCTAGGAACGACGGCGTGCCCAA
GTCGGCAGGTTTTGAGAAGGCTTCCCGAGCTGGCGCACATTGGCACATGA
TTGCGAGGTCCCTGGTAACGGACCGTCTTTACCTGGTCATTCCCACTTGG
GTCTACGTTGCGGGCCTGGTTCTTGCTGCAGCTCTCACCAGGTTCCTTCT
CTGAAGCCTCGAGCAAGACAAGCGCTAGGAACGACGGCGTGCCCAAGTCG
GCAGGTTTTGAGAAGGCTTCCCGAGCTGGCGCACATTGGCACATGATTGC
GAGGTCCCTGGTAACGGACCGTCTTTACCTGGTCATTCCCACTTGGGTCT
ACGTTGCGGGCCTGGTTCTTGCTGCAGCTCTCACCAGGGGCCTATCATCC
AAAACCGTCAAGGAGCAGGCTCTTCCGCCCTTGCCCTTGCTGCTGATGCC
AGAGGAAAACCTTCAGTGGAAGGGAATCAAGCACGCGGGGCTCTCTTCGT
GGATCTCCACGCGCCCTCACAGAACTCCGATGGTCATTGCGTTGGCAGCG
TCGTGCGGTATGCTAGTTATCTGGGTCTTCGGCGGTTGTCTCGCGGATGT
TTTGAGTTTTGTGCCGGGAGGCCTAGATCGTGTCCGTAACGCACTCTTGT
CTGTCCCCGGAGGATCGGGGGCTGTCGCGGTGGGGATGGCCATGCTCCGC
ACGGTGGATGCCGTGTTTCGGTTCCTGAACCCGCTCCAAGGCGCCGAAGA
CGCCCTACGCTTACCAAACAAGGTAAGAGTTGCGGTCGGCCTATCATCCA
AAACCGTCAAGGAGCAGGCTCTTCCGCCCTTGCCCTTGCTGCTGATGCCA
GAGGAAAACCTTCAGTGGAAGGGAATCAAGCACGCGGGGCTCTCTTCGTG
GATCTCCACGCGCCCTCACAGAACTCCGATGGTCATTGCGTTGGCAGCGT
CGTGCGGTATGCTAGTTATCTGGGTCTTCGGCGGTTGTCTCGCGGATGTT
TTGAGTTTTGTGCCGGGAGGCCTAGATCGTGTCCGTAACGCACTCTTGTC
TGTCCCCGGAGGATCGGGGGCTGTCGCGGTGGGGATGGCCATGCTCCGCA
CGGTGGATGCCGTGTTTCGGTTCCTGAACCCGCTCCAAGGCGCCGAAGAC
GCCCTACGCTTACCAAACAAGGTAAGAGTTGCGGTC
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