mRNA_H-elongata_contig19475.5417.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 3.690e-111 Identity = 246/596 (41.28%), Postives = 331/596 (55.54%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPFDTPGVASGESGVATSGTAPPATNAATLLS-------TGGAS-------RLHVTRAGTRNNPNTVDVVNPFSNPSVLRL 3420
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + F+ DP +N G D TP + S D+WHRR+GH+NP+ M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DR FEGKLCG+ SK IYV K + ESRNVT +ETP T+P D YE +++ TS+L T+ T D V + + E+L E+R ++ NI R EL Q+ S + G A + T T P T T L+ T AS RL VTR TR + T D ++P P L +
Sbjct: 406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEHHVMNFTSLLGCRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNISRAELRQNNAGMDSDNYFAAGGADSNNNPRT--TTPSRTWRDTTLASPTTPTDTDSASPAPISMRRLTVTRPATRTHQPTDDPIDPSCIPKSLEV 990
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE) HSP 1 Score: 377 bits (967), Expect = 2.140e-110 Identity = 193/406 (47.54%), Postives = 253/406 (62.32%), Query Frame = 1
Query: 1708 MNEYKTLATPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTDPHD---KVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAK---GG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKAC 2907
+++Y +PK V AG+ + G H V DNRG Q V+I L+V GLGRN+FSPT+ LK G+ V E P L++ VIPL QDP DQG+ +L++ F+ + K + + Q V + S D WHRR+GH+N +++D+LR+ GT V+Y ++S C +C + K KQ HPK +TR+ ++P +LV ++ MGP+ P AK G Y K D+++MKE++LLR K T E +H YNM V G E IR DKGGE TG F+ C N+ I +EY ATNT QQ GV ER+GQTLA +TRCL+KDG FP + GEL TA YL NRSPHS LGGATPY K+ +K D++ LR IGARA VHHE Y +K DRAFEGKLCGF D C
Sbjct: 229 LHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTL-VSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDPCRC 633
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE) HSP 1 Score: 381 bits (978), Expect = 1.450e-109 Identity = 224/519 (43.16%), Postives = 294/519 (56.65%), Query Frame = 1
Query: 1696 IGEKMNEYKTLATPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTD---------------PHDKVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTL 3207
+ E M E K LA PK V+ G H + G H V D+ G++ V + LVV GLGRNVFS A +KNGV LV+E GNP L+VG +PL QDP D G+ S+++ FQ P D+ K D V D GVA A + + WHR + H+N ++M+LLR+KE GV+++ +++ CDIC ++KS+Q AHP+ T R+ T PM+LVY + MG TP AKGG Y+SKF +S MKEI+LL++ T LH YNM V PLG E IR + GGE F +++ I +EY ATNT QQNGV ER+GQTL ITR LMKDG FP L E TA YLSNR P S LGG TPYFKM++ T L + SKA IY P+ +VESRNVT +ET Y++P V D YE +L TSVL K +T E FDG + ++ + E ++LR EIR++RH N++REE+ Q +
Sbjct: 155 LKEIMRESKELAKPKVVSVGGGHELDGNATGLIHCTVKDSNGEKKAVLLRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDL-GVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEFTKYFMDSDITIEYAATNTPQQNGVSERDGQTLTTITRYLMKDGAFPPTLWREQMMTAEYLSNRPPRSTLGGVTPYFKMYNTARKRTCLAS-------------------------------SKAYRIYNPATGNVVESRNVTFIETSVYSMPPSVLDDDNLYESDVLNFTSVLGKVSTREDEFDGSGTLDT--VDLKIENQLLRQEIRRMRHNNLIREEIQQQAI 639
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 386 bits (992), Expect = 3.130e-109 Identity = 211/464 (45.47%), Postives = 282/464 (60.78%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHD-------------KVCIKYDNV*QGDATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + F+ DP K + Q D TP + S D+WHRR+GH+NP+ M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DRAFEGKLCG+ DSK IYV K + ESRNVT +ETP T+P D YE ++ TS+L + T+
Sbjct: 406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFRKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKNTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS 868
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE) HSP 1 Score: 381 bits (978), Expect = 1.890e-108 Identity = 209/464 (45.04%), Postives = 279/464 (60.13%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL + +DQG+ +L + F+ DP +N G D TP + S D+WHRR+GH+NP M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ TNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DRAFEGKLCG+ DSK IYV K + ESRNVT +ETP T+P D YE ++ TS+L + T+
Sbjct: 90 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEYKAPHLTIGGEVVVPLKPESQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS 552
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 2.500e-108 Identity = 243/596 (40.77%), Postives = 329/596 (55.20%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPFDTPGVASGESGVATSGTAPPATNAATLLST--------------GGASRLHVTRAGTRNNPNTVDVVNPFSNPSVLRL 3420
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + F+ DP +N G D TP + S D+WHRR+GH+NP+ M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DR FEGKLCG+ SK IYV K + ESRNVT +ETP T+P D YE ++ TS+L + T+ T D V + + E+L E+R ++ NI R EL Q+ S + G A + T T P T+ T L + RL VTR TR + T D ++P P L +
Sbjct: 406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNISRAELRQNNAGMDSDNYFAAGGADSNNNPRT--TTPSRTSQDTTLESPTTPTDXXXXXXXXXXMRRLTVTRPATRTHQPTDDPIDPSCIPKSLEV 990
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE) HSP 1 Score: 385 bits (988), Expect = 4.950e-106 Identity = 224/518 (43.24%), Postives = 300/518 (57.92%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGD----ATPGVAYIAET-----------SPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPF 3228
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + F+ DP +N G P I T S D+WHRR+GH+NP M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA V+HE Y +K DRAFEGKLCG+ DSK IYV K + ESRNVT +ETP T+P D YE ++ TS+L + T+ T D V N + E+L E+R ++ I R EL Q S +
Sbjct: 406 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTLHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVYHERYKKKLVDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----NYGTQSELLVDEMRNMQQDIINRAELRQTNAGTDSDDY 914
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE) HSP 1 Score: 366 bits (939), Expect = 5.450e-106 Identity = 189/395 (47.85%), Postives = 246/395 (62.28%), Query Frame = 1
Query: 1768 IYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFS-----------PTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTDPHD---KVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAK---GG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSK 2901
+ G H V DNRG Q V+I L+V GLGRN+FS PT+ LK G+ V+E P L++ D VIPL QDP DQG+ +L++ F+ + K + + Q V + S D WHRR+GH+N +++D+LR+ GTGV+Y ++S C +C + K KQ HPK +TR+ ++P +LV ++ MGP+ P AK G Y K D+++MKE++LLR K T E +H YNM V G E IR DKGGE TG F+ C N+ I +EY ATNT QQ G ER+GQTLA +TRCL+KDG FP + GEL TA YL NRSPHS LGGATPY K+H+K D++ LR IGARA VHHE Y +K DRAFEGKLCGF DS+
Sbjct: 290 LKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTL-VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQ 683
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5K8D4_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8D4_9PHAE) HSP 1 Score: 375 bits (962), Expect = 5.590e-106 Identity = 202/449 (44.99%), Postives = 277/449 (61.69%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + QT ++ D+ + ++ S D+WHRR+GH+NP+ M++LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE T + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GE TA L+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DRAFEGKLCG+ DSK IYV K + ESRNVT +ETP T+ D +E ++ LTS+L + T+
Sbjct: 525 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLTITAQTKFGKPEAVQIDHTLHATCSAAMS----VSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTREEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGERMMTAACLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTILPHRWDDRLGHEQDVMNLTSLLGRGTS 968
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5L4X4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X4_9PHAE) HSP 1 Score: 358 bits (920), Expect = 3.710e-105 Identity = 218/522 (41.76%), Postives = 295/522 (56.51%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGDATPGVAYIAET--------------SPDIWHRRIGHMNPQNMD-----LLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPF 3228
TPK + AG+ + G H + D++ Q PVK+ L+V GLGRN+F+PTA LK G+ VLE P L++G +VV+PL Q+ +DQG+ +L + F+ DP K + + T A + +T S D RR P+ +LRR TGV Y VS CD C +TK K+ PK T+R TKP +LV + MGPI P AK + Y++K F+RM+E++LLR + T + LH YNM V G E +R DKGGE TG + C + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP + GEL TA YL+NR+PH+ LGGATPY KM++ D++ LRAIGARA VHHE Y +K DRAFEGKLCG+ DSK IYV K + ESRNVT +ETP T+P D YE ++ TS+L + T+ T D V + + E+L E+R ++ NI R EL Q+ S +
Sbjct: 18 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASK-----QDTPEQPRTRAQAEVRKTRSGTDRSHSARDMLSGDERERRPLAPAPRPHQSKCYGILRRNPATGVKYDGPVSPCDNCHITKHKKPPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEILRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNINRAELRQNNAGTDSDDY 525 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19475.5417.1 >prot_H-elongata_contig19475.5417.1 ID=prot_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MTDMGDVSHILGMEVKHKYEKGTLAIIQKAYVDSILERFGMHDFNATHTPback to top mRNA from alignment at H-elongata_contig19475:2..5817- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19475.5417.1 ID=mRNA_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5816bp|location=Sequence derived from alignment at H-elongata_contig19475:2..5817- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19475:2..5817- >mRNA_H-elongata_contig19475.5417.1 ID=mRNA_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig19475:2..5817- (Himanthalia elongata Himel1 dioecious)back to top |