mRNA_H-elongata_contig19475.5417.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19475.5417.1
Unique NamemRNA_H-elongata_contig19475.5417.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 3.690e-111
Identity = 246/596 (41.28%), Postives = 331/596 (55.54%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPFDTPGVASGESGVATSGTAPPATNAATLLS-------TGGAS-------RLHVTRAGTRNNPNTVDVVNPFSNPSVLRL 3420
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L + F+ DP        +N   G             D TP    +     S D+WHRR+GH+NP+ M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DR FEGKLCG+   SK   IYV  K  + ESRNVT +ETP  T+P     D   YE +++  TS+L   T+   T D    V     +   + E+L  E+R ++  NI R EL Q+     S  +   G A   +   T  T P  T   T L+       T  AS       RL VTR  TR +  T D ++P   P  L +
Sbjct:  406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEHHVMNFTSLLGCRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNISRAELRQNNAGMDSDNYFAAGGADSNNNPRT--TTPSRTWRDTTLASPTTPTDTDSASPAPISMRRLTVTRPATRTHQPTDDPIDPSCIPKSLEV 990          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 2.140e-110
Identity = 193/406 (47.54%), Postives = 253/406 (62.32%), Query Frame = 1
Query: 1708 MNEYKTLATPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTDPHD---KVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAK---GG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKAC 2907
            +++Y    +PK V  AG+  + G      H  V DNRG Q  V+I  L+V GLGRN+FSPT+ LK G+  V E   P L++   VIPL QDP DQG+ +L++ F+ +      K  + +    Q      V +    S D WHRR+GH+N +++D+LR+  GT V+Y  ++S C +C + K KQ  HPK +TR+ ++P +LV ++ MGP+ P AK   G   Y  K   D+++MKE++LLR K  T E +H YNM V    G   E IR DKGGE TG  F+  C N+ I +EY ATNT QQ GV ER+GQTLA +TRCL+KDG FP  + GEL  TA YL NRSPHS LGGATPY K+ +K  D++ LR IGARA VHHE Y +K  DRAFEGKLCGF  D   C
Sbjct:  229 LHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTL-VSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDPCRC 633          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.450e-109
Identity = 224/519 (43.16%), Postives = 294/519 (56.65%), Query Frame = 1
Query: 1696 IGEKMNEYKTLATPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTD---------------PHDKVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTL 3207
            + E M E K LA PK V+  G H + G      H  V D+ G++  V +  LVV GLGRNVFS  A +KNGV LV+E GNP L+VG   +PL QDP D G+ S+++ FQ                 P D+   K D V   D   GVA  A  + + WHR + H+N ++M+LLR+KE  GV+++ +++ CDIC ++KS+Q AHP+ T R+ T PM+LVY + MG  TP AKGG  Y+SKF   +S MKEI+LL++   T   LH YNM V  PLG   E IR + GGE     F    +++ I +EY ATNT QQNGV ER+GQTL  ITR LMKDG FP  L  E   TA YLSNR P S LGG TPYFKM++     T L +                               SKA  IY P+   +VESRNVT +ET  Y++P  V  D   YE  +L  TSVL K +T E  FDG   +    ++ + E ++LR EIR++RH N++REE+ Q  +
Sbjct:  155 LKEIMRESKELAKPKVVSVGGGHELDGNATGLIHCTVKDSNGEKKAVLLRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDL-GVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEFTKYFMDSDITIEYAATNTPQQNGVSERDGQTLTTITRYLMKDGAFPPTLWREQMMTAEYLSNRPPRSTLGGVTPYFKMYNTARKRTCLAS-------------------------------SKAYRIYNPATGNVVESRNVTFIETSVYSMPPSVLDDDNLYESDVLNFTSVLGKVSTREDEFDGSGTLDT--VDLKIENQLLRQEIRRMRHNNLIREEIQQQAI 639          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 3.130e-109
Identity = 211/464 (45.47%), Postives = 282/464 (60.78%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHD-------------KVCIKYDNV*QGDATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L + F+ DP               K   +     Q D TP    +     S D+WHRR+GH+NP+ M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DRAFEGKLCG+  DSK   IYV  K  + ESRNVT +ETP  T+P     D   YE  ++  TS+L + T+
Sbjct:  406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFRKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKNTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS 868          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.890e-108
Identity = 209/464 (45.04%), Postives = 279/464 (60.13%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL  + +DQG+ +L + F+ DP        +N   G             D TP    +     S D+WHRR+GH+NP  M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+  TNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DRAFEGKLCG+  DSK   IYV  K  + ESRNVT +ETP  T+P     D   YE  ++  TS+L + T+
Sbjct:   90 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEYKAPHLTIGGEVVVPLKPESQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS 552          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 2.500e-108
Identity = 243/596 (40.77%), Postives = 329/596 (55.20%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QG-------------DATPGV--AYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPFDTPGVASGESGVATSGTAPPATNAATLLST--------------GGASRLHVTRAGTRNNPNTVDVVNPFSNPSVLRL 3420
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L + F+ DP        +N   G             D TP    +     S D+WHRR+GH+NP+ M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DR FEGKLCG+   SK   IYV  K  + ESRNVT +ETP  T+P     D   YE  ++  TS+L + T+   T D    V     +   + E+L  E+R ++  NI R EL Q+     S  +   G A   +   T  T P  T+  T L +                  RL VTR  TR +  T D ++P   P  L +
Sbjct:  406 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNISRAELRQNNAGMDSDNYFAAGGADSNNNPRT--TTPSRTSQDTTLESPTTPTDXXXXXXXXXXMRRLTVTRPATRTHQPTDDPIDPSCIPKSLEV 990          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 4.950e-106
Identity = 224/518 (43.24%), Postives = 300/518 (57.92%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGD----ATPGVAYIAET-----------SPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPF 3228
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L + F+ DP        +N   G       P    I  T           S D+WHRR+GH+NP  M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA V+HE Y +K  DRAFEGKLCG+  DSK   IYV  K  + ESRNVT +ETP  T+P     D   YE  ++  TS+L + T+   T D    V     N   + E+L  E+R ++   I R EL Q      S  +
Sbjct:  406 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTLHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVYHERYKKKLVDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----NYGTQSELLVDEMRNMQQDIINRAELRQTNAGTDSDDY 914          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 5.450e-106
Identity = 189/395 (47.85%), Postives = 246/395 (62.28%), Query Frame = 1
Query: 1768 IYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFS-----------PTANLKNGVNLVLEAGNPLLSVGDVVIPLVQDPEDQGLSSLNMVFQTDPHD---KVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAK---GG*KYISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSK 2901
            + G      H  V DNRG Q  V+I  L+V GLGRN+FS           PT+ LK G+  V+E   P L++ D VIPL QDP DQG+ +L++ F+ +      K  + +    Q      V +    S D WHRR+GH+N +++D+LR+  GTGV+Y  ++S C +C + K KQ  HPK +TR+ ++P +LV ++ MGP+ P AK   G   Y  K   D+++MKE++LLR K  T E +H YNM V    G   E IR DKGGE TG  F+  C N+ I +EY ATNT QQ G  ER+GQTLA +TRCL+KDG FP  + GEL  TA YL NRSPHS LGGATPY K+H+K  D++ LR IGARA VHHE Y +K  DRAFEGKLCGF  DS+
Sbjct:  290 LKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTL-VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQ 683          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5K8D4_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8D4_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 5.590e-106
Identity = 202/449 (44.99%), Postives = 277/449 (61.69%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGDATPGVAYIAETSPDIWHRRIGHMNPQNMDLLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTT 3066
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L +  QT       ++ D+      +  ++     S D+WHRR+GH+NP+ M++LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE T    +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GE   TA  L+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DRAFEGKLCG+  DSK   IYV  K  + ESRNVT +ETP  T+      D   +E  ++ LTS+L + T+
Sbjct:  525 TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLTITAQTKFGKPEAVQIDHTLHATCSAAMS----VSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTREEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGERMMTAACLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTILPHRWDDRLGHEQDVMNLTSLLGRGTS 968          
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Match: A0A6H5L4X4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X4_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 3.710e-105
Identity = 218/522 (41.76%), Postives = 295/522 (56.51%), Query Frame = 1
Query: 1732 TPKDVATAGDHTIYGIGNSTAHWLVHDNRGDQFPVKIHVLVVSGLGRNVFSPTANLKNGVNLVLEAGNPLLSVG-DVVIPLVQDPEDQGLSSLNMVFQTDPHDKVCIKYDNV*QGDATPGVAYIAET--------------SPDIWHRRIGHMNPQNMD-----LLRRKEGTGVNYTCTVSDCDICTVTKSKQHAHPKTTTRKATKPMELVYMEFMGPITPAAKGG*K---YISKFIGDFSRMKEIFLLRSKRGTAELLHQYNMTVVVPLGLLTENIR*DKGGEYTGRGFKTLCINAGIHVEYTATNTLQQNGVYERNGQTLAQITRCLMKDGRFPGFL*GELFFTATYLSNRSPHSVLGGATPYFKMHSKEADMTELRAIGARACVHHETYARKPGDRAFEGKLCGFSQDSKACMIYVPSKRTIVESRNVTSLETPAYTLPLDVNLDHYYYEGYIL*LTSVLDKPTTIEGTFDGPKPVSEPILNRQAEVEMLRWEIRKLRHYNIVREELSQHTLSATSQPF 3228
            TPK +  AG+  + G      H  + D++  Q PVK+  L+V GLGRN+F+PTA LK G+  VLE   P L++G +VV+PL Q+ +DQG+ +L + F+ DP  K      +  +   T   A + +T              S D   RR     P+        +LRR   TGV Y   VS CD C +TK K+   PK T+R  TKP +LV  + MGPI P AK   +   Y++K    F+RM+E++LLR +  T + LH YNM V    G   E +R DKGGE TG   +  C  + I +E+ ATNT Q+ GV ER+GQTLA +TR L++DG FP  + GEL  TA YL+NR+PH+ LGGATPY KM++   D++ LRAIGARA VHHE Y +K  DRAFEGKLCG+  DSK   IYV  K  + ESRNVT +ETP  T+P     D   YE  ++  TS+L + T+   T D    V     +   + E+L  E+R ++  NI R EL Q+     S  +
Sbjct:   18 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASK-----QDTPEQPRTRAQAEVRKTRSGTDRSHSARDMLSGDERERRPLAPAPRPHQSKCYGILRRNPATGVKYDGPVSPCDNCHITKHKKPPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEILRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTS---TGDEDNKV-----DYGTQSELLLHEMRNMQQDNINRAELRQNNAGTDSDDY 525          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19475.5417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1Z9_9PHAE3.690e-11141.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF6_9PHAE2.140e-11047.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYD3_9PHAE1.450e-10943.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3T5_9PHAE3.130e-10945.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL01_9PHAE1.890e-10845.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KHG5_9PHAE2.500e-10840.77Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JTQ0_9PHAE4.950e-10643.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT84_9PHAE5.450e-10647.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8D4_9PHAE5.590e-10644.99Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5L4X4_9PHAE3.710e-10541.76Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19475contigH-elongata_contig19475:2..5817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score128.3
Seed ortholog evalue4.3e-27
Seed eggNOG ortholog1108849.XP_002562561.1
EggNOG free text desc.Encoded by
EggNOG OGs20FR9@147545,38DPC@33154,3NUZ7@4751,3QNZW@4890,3SBVI@5042,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size5703
Cds size618
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19475.5417.1prot_H-elongata_contig19475.5417.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19475 792..1409 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930107.6339157-UTR-H-elongata_contig19475:1..7911622930107.6339157-UTR-H-elongata_contig19475:1..791Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 2..791 -
1691679283.1635795-UTR-H-elongata_contig19475:1..7911691679283.1635795-UTR-H-elongata_contig19475:1..791Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 2..791 -
1622930107.6648872-UTR-H-elongata_contig19475:1409..54731622930107.6648872-UTR-H-elongata_contig19475:1409..5473Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 1410..5473 -
1691679283.1877882-UTR-H-elongata_contig19475:1409..54731691679283.1877882-UTR-H-elongata_contig19475:1409..5473Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 1410..5473 -
1622930107.6841602-UTR-H-elongata_contig19475:5586..58171622930107.6841602-UTR-H-elongata_contig19475:5586..5817Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 5587..5817 -
1691679283.1973443-UTR-H-elongata_contig19475:5586..58171691679283.1973443-UTR-H-elongata_contig19475:5586..5817Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19475 5587..5817 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930107.6492667-CDS-H-elongata_contig19475:791..14091622930107.6492667-CDS-H-elongata_contig19475:791..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19475 792..1409 -
1691679283.1791375-CDS-H-elongata_contig19475:791..14091691679283.1791375-CDS-H-elongata_contig19475:791..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19475 792..1409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19475.5417.1

>prot_H-elongata_contig19475.5417.1 ID=prot_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MTDMGDVSHILGMEVKHKYEKGTLAIIQKAYVDSILERFGMHDFNATHTP
RYGPELSVEQPGSKLLNPAAMELYQSITDSLLYLPQCTRYNMCYTVNQLT
RACSKLAEIHMAAAKHALRYLQRTPDLSIVLKRGQFRMVSYTDASFGANP
DNRKSTTGYIFFLGGGLISFGSKTQSLTAQSTVEGELQALSYETREAVYL
SNFLI*
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mRNA from alignment at H-elongata_contig19475:2..5817-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19475.5417.1 ID=mRNA_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5816bp|location=Sequence derived from alignment at H-elongata_contig19475:2..5817- (Himanthalia elongata Himel1 dioecious)
TTTGAAGATGTCGGAACGACCGGTTCGACAAGCAACAAAGGAAAGCGAAG AGAAACATCAGGGATTTGACATTGACCTCCTCTACACCATTTCAAGAGGG TACAAGGGGCGGTACTTGGCAAGTCTCAGGAAAAACCTTGAGCAATCGAC TACTGCTGACGTAAGACCACAGGGGCAACAGCAGGTATTTGACATCGACC ACCTTTACACCATTTTGAGAGGGTACGAGGGGCGATGCGCGACAAGTATC AGGTATAACCTTGAGCAATCGACTTCTGCTGACGTAAGACCACAGGGGCA ACAGCAGGGATTTGACATCGACCACCTCTACACCATTTCGAGAGGGTACG AGGGGCGGTGCTTGGCAAGTCTCAGATATAACCTTGAGCAATCGACTACT GCTGACTTAAGGCCACACAGGGGCAACAACAGGGATTTGACATCGACCAT GTTTACATCACTTCGACAGGATACGAGGGGCGGTGCTCAGCAAGTCTCAA GTATCATCTTGAACAACCACTGCCGACGTAAGGCCAAAACAACCCAGCAG TGGATCGAGTCCTACATCACTTCGAGAGGGTACGGGGACCTTTATGCCAC TTCGGGGGGGGGTACGAGGAACAGCTACTAATGTGCGACTATCACCGGAG GAGTAGAAGACCGCAGCGGGAACAGCATAGCCAGTATGAATAACACCGGT ACTATGGGTGACACTGGGACCAACCTGGCCAACACCATTCGCGATCTCAA GAATTTCGACGGGAGGAACCCAGCTGAGTTCAAGGGCTGAATGAAGAAGC TCTGTACCGTTTTAGGGTTTACCCGTAGAGACATTTTGCCTCTCCTGAAA GGGCAACGGTGCCATCCAACACCACCGAACCAGCAGCATACAACAGGGCG AATGAAGAATTGTACACTATATTATATATCCTTGTTGAGTTACCCGCAGC CCTCTGCGTTCATAGACACGAGGACGATGCCGATATCAGCGGCAACGGGA AATAAGCCTTTGAAGAACTCCGCAACAGCTATGATAAGGTCACCGACGAG ATCATCTGCGCAATCATGGAGGAGCTCGTTAACACGCCAACGGAGCCTGG ACAGAACCCCGACGACTACTTCAACCAGAAGCACCTTCTCCGTCTCAAAG TGGATAAAATGGGAGAGAAAGTCTCCGACCGGTGGTTGAAGGACATCATC GTCACGGGTTTCACTGATGAGTACAAGGATGTGAAGATGATGATGTATCG CGACGCAGTTGGCCATGCGACACATGTTTCTCGACCATCAGTTACGCAAC TACATGAAAGAACGAATCGCTGGCCGCGGCATTGCCATGACTGCCAAGAC AGCAATGGATCCATCCGACACCATCTGCTTCAGCTGCAAGGAACGTGGAC ACACCAAAAATAACTGCAACAAGCCTAAAACCGAGCCAGCAGGAGCAACG AAGTAATGTTCAGTTCACCGCACCACCACACACAGTGACAAGGAGTGCTA CAAACAGGGAGCATCACGGCCGAAGAAAGAAAACGCCTTTTCGCTGTTTA AACAATGCACACACTGCTCATCTGAGAGCAACCCGAAGAGAGTAACCCGA AGCAATCTATGGATAGGAACACCGACACCTCCAAGGGCGAGAAGCCGGCC ATCGACTTCACTGGCAGTGGCAACGACTTCGACGAAGGGTTTATGTTCAC CGCTGCGACTGCCACCTCGAGAAAGACCACTCCCAGCGCAAAAGTTGCTA CTCTGCTTGTGGATAGTGGTGCGCCTGATATATTCCTTGATAACGCACTC ATACCTGGATTGGAGAAAAAATGAACGAGTACAAGACGTTAGCGACACCC AAGGACGTTGCCACTGCCGGAGACCACACGATTTACGGAATTGGTAACAG CACCGCGCACTGGCTTGTTCACGACAATCGTGGTGATCAATTCCCTGTCA AAATACATGTGCTAGTGGTATCAGGCCTTGGGCGCAATGTCTTCTCGCCA ACGGCGAACCTGAAGAACGGAGTCAACCTCGTTCTCGAAGCTGGTAACCC GCTCCTATCCGTCGGTGACGTCGTCATCCCTCTTGTACAAGATCCAGAAG ACCAAGGGTTAAGTTCGTTGAACATGGTTTTCCAAACCGACCCTCACGAC AAGGTGTGCATAAAATACGACAACGTTTAACAAGGTGATGCGACACCTGG GGTCGCGTACATTGCTGAAACTAGTCCCGACATCTGGCACCGAAGAATAG GGCACATGAATCCACAAAACATGGACCTACTGCGTCGAAAGGAAGGAACT GGCGTCAACTACACCTGTACAGTGTCGGACTGCGATATTTGCACTGTTAC AAAGAGTAAGCAACATGCACACCCCAAGACAACAACGCGAAAGGCAACGA AGCCGATGGAGCTGGTCTACATGGAATTCATGGGACCCATCACTCCTGCG GCCAAGGGTGGATAAAAATACATCAGCAAGTTCATCGGCGACTTCTCGCG CATGAAGGAGATCTTCCTCCTCAGGAGCAAGAGGGGGACCGCCGAATTGC TACATCAGTACAACATGACGGTCGTCGTTCCGCTGGGACTCCTTACCGAG AATATCCGATGAGACAAGGGTGGTGAGTATACCGGGAGGGGGTTCAAAAC TCTATGTATTAACGCCGGGATCCACGTGGAGTACACGGCAACAAACACAC TGCAACAAAATGGGGTGTACGAGAGAAACGGGCAGACATTAGCTCAGATC ACGAGATGCCTGATGAAAGACGGGAGATTCCCTGGCTTCCTGTGAGGGGA ACTATTCTTCACGGCTACGTACCTGTCCAACAGATCTCCCCACTCTGTTT TGGGAGGAGCTACGCCATACTTCAAGATGCACAGCAAAGAGGCTGACATG ACCGAACTACGCGCCATTGGGGCCAGGGCATGCGTACACCATGAAACCTA CGCGAGGAAGCCGGGCGATCGAGCTTTCGAAGGCAAGCTGTGTGGATTCA GCCAAGACAGCAAGGCCTGCATGATCTATGTTCCTTCCAAGCGTACTATC GTGGAGAGCCGCAACGTCACGTCCTTGGAAACACCAGCGTACACCCTACC CTTGGACGTAAACCTTGACCACTATTACTACGAAGGATACATTCTTTGAC TTACGTCAGTACTGGACAAACCCACTACGATCGAAGGAACCTTCGACGGA CCGAAGCCGGTGAGCGAACCCATCCTAAATCGTCAAGCCGAGGTGGAGAT GTTACGGTGGGAAATCCGAAAACTCAGACACTACAACATTGTTCGGGAGG AGCTGAGCCAACACACACTTTCCGCCACAAGCCAGCCTTTTGATACGCCT GGGGTGGCATCGGGCGAATCTGGGGTCGCAACATCAGGGACTGCTCCACC GGCTACAAACGCGGCCACACTGCTAAGCACAGGAGGTGCATCGCGTCTCC ATGTCACCCGAGCCGGTACAAGGAACAATCCCAACACCGTGGACGTCGTC AACCCTTTTAGCAATCCAAGCGTACTACGCCTCGCTCACACGCATCGACC CCAGTGCTCTCACTTCCTCTCAACTACTAGTGATTGCCGAAACGACACGC CGCTGAATCACGGGAACGCCGGATTTTGCTTACTTGGATGGAAAACCATT TGTCGCTTCCAGAGCCTTCGCGTACGCCGCTGGTGCCCCAACCCACAAAG GGTTCTCGGAGGAGAGTAACAAGACCATCAAAATCCCGAACAGCTACAAG GATGCCATGGACTCTCTCCAGCGCGACCAGTGGACAGAGGCAATTAAGAA AGAGATTGACAACCTGAAGCAACACGAGGTCTACAAATTGGTTCCTATCT CCAGTGTCCCGAAAGGAGAAAATATCATAGGCTCACGTTTCGTGTTCAAG CAGAAGGTGGGAGGACGTTTCAAGGCTCGGCTGGTCGTCCAAGGCCACAT GCAGGGAGCTGACATCGACTACGGAAGAAGCTATGCCCCAGTGTGCCGTA TCGGCAGCATTCAGACTCTTCTCGTCATAGTATGTGAGCACGACTGGCCT GTATGGCAGATGGACGTCGAGGTTGCGTTCCTGTAGTCCTATATCGACAA GGACGTCTTCGTGAAGCCTGCCCCGGGACAAAGCCCCAAGGACCCCAAGA CTGGTGAAATCATAGTGTACAAAACTCCAACGTAGTCTGTAAGGACTCGC GCAGTCTCCTGTGCTATAGTACGACACTACTGACGGCGTACTAGTGATCA TCGGATTTACACCCACACACTCGGACCCTTGCGTATACACTTACGGAAGC GGAGATACTCTCGTCAGCCTGGCCATCTACCTCGACGATGTCTTCCTCAC CTAAAAGGATCCCGAGCTAGTGAAACGGAAGAAGAAGGAACTTAAGGACA GGTTCGAGATGACGGATATGGGAGACGTGAGCCACATTCTCGGAATGGAA GTCAAGCACAAGTACGAAAAAGGAACGCTCGCCATCATACAGAAGGCCTA CGTCGACAGCATCCTCGAAAGATTCGGAATGCACGACTTTAACGCCACAC ACACTCCCAGATACGGGCCGGAGCTATCAGTGGAACAGCCAGGAAGCAAG CTACTTAACCCAGCAGCGATGGAGCTTTACCAGTCCATCACCGACAGCTT GCTTTACCTTCCACAATGCACGAGGTACAATATGTGCTACACGGTCAACC AGCTGACAAGGGCGTGTAGTAAGCTTGCCGAAATCCACATGGCAGCTGCA AAACACGCGCTCCGCTATCTCCAACGAACACCGGACCTATCGATCGTACT CAAACGCGGGCAATTCCGGATGGTGTCATACACCGACGCATCATTCGGAG CTAATCCCGACAACCGCAAGTCGACGACTGGATATATCTTCTTCCTCGGC GGAGGACTCATCAGTTTCGGGTCCAAAACTCAGTCACTTACGGCTCAGTC GACAGTGGAGGGCGAACTTCAGGCACTCAGCTATGAAACAAGGGAGGCGG TATACCTCTCCAACTTCCTGATATAACTGAGCTTCAAGATCCCATCAATA GCGACATCACCGGAGCTCTCAGCGTTGTAGGAAACGAAATGTCCAGCTCG AGGACCAAGCACGTCGCTCTCCGCTTCTTTTTTGTGTGAGAACTCATGAA GAGGAACATAACCACTCTTCACCACAAGCCAACCCCCGAGATGCTGGTGG ACATCACGGTGAAACATCTACCCAAACAGAAGTTCAACAACATCCTGCAG GAGATCAAGGATTTCACATGCAGAAAGGATGAGCACGGTTGAATGGGCAT GATTATGCTGCTGTTCGTTTTCAGTTCATTTTAGAGAAACTTAGAGCGCA TTTTCTGAAGTGCAGCAGGGTTAGTCGAATAATCATCGCCAACCTGCGCG TGAGTTTTTGTGTTAACTGAAGAAGGATTGGTTTCTTGGATCGCGGAGTA CTGTCTAGATTGCCTCTATCGAGGGGTCGTGTCATGGACATGGATGTGTC CATGTTGGCAGCAGCTAATTTGTGTTAACTGAAGAAGGGTTGTTTCCTTG GATCGCGGAGTAATGTCTAGGTTGCCTCCATCGAGGGGTCGTGTCAGGGA TATCTATGTTTCCATGCTGGCAGCAACCAATTTATATCCCTTCTGTGTTC GCTGTCGGCAACATAGTCAACGATTTATGACAGGACATGGAGGGACTGTC AGAAAATAGTGCGGCGGGATGAGTACCGTATATTTTTATTATAGAAAAGT TATTCGACGCGATGTGGCGCGTAAGGTCCTGCAAATTCGTACCTTCGCGA ATTCGCTCTACACTGC
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Coding sequence (CDS) from alignment at H-elongata_contig19475:2..5817-

>mRNA_H-elongata_contig19475.5417.1 ID=mRNA_H-elongata_contig19475.5417.1|Name=mRNA_H-elongata_contig19475.5417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig19475:2..5817- (Himanthalia elongata Himel1 dioecious)
ATGACGGATATGGGAGACGTGAGCCACATTCTCGGAATGGAAGTCAAGCA
CAAGTACGAAAAAGGAACGCTCGCCATCATACAGAAGGCCTACGTCGACA
GCATCCTCGAAAGATTCGGAATGCACGACTTTAACGCCACACACACTCCC
AGATACGGGCCGGAGCTATCAGTGGAACAGCCAGGAAGCAAGCTACTTAA
CCCAGCAGCGATGGAGCTTTACCAGTCCATCACCGACAGCTTGCTTTACC
TTCCACAATGCACGAGGTACAATATGTGCTACACGGTCAACCAGCTGACA
AGGGCGTGTAGTAAGCTTGCCGAAATCCACATGGCAGCTGCAAAACACGC
GCTCCGCTATCTCCAACGAACACCGGACCTATCGATCGTACTCAAACGCG
GGCAATTCCGGATGGTGTCATACACCGACGCATCATTCGGAGCTAATCCC
GACAACCGCAAGTCGACGACTGGATATATCTTCTTCCTCGGCGGAGGACT
CATCAGTTTCGGGTCCAAAACTCAGTCACTTACGGCTCAGTCGACAGTGG
AGGGCGAACTTCAGGCACTCAGCTATGAAACAAGGGAGGCGGTATACCTC
TCCAACTTCCTGATATAAATGACGGATATGGGAGACGTGAGCCACATTCT
CGGAATGGAAGTCAAGCACAAGTACGAAAAAGGAACGCTCGCCATCATAC
AGAAGGCCTACGTCGACAGCATCCTCGAAAGATTCGGAATGCACGACTTT
AACGCCACACACACTCCCAGATACGGGCCGGAGCTATCAGTGGAACAGCC
AGGAAGCAAGCTACTTAACCCAGCAGCGATGGAGCTTTACCAGTCCATCA
CCGACAGCTTGCTTTACCTTCCACAATGCACGAGGTACAATATGTGCTAC
ACGGTCAACCAGCTGACAAGGGCGTGTAGTAAGCTTGCCGAAATCCACAT
GGCAGCTGCAAAACACGCGCTCCGCTATCTCCAACGAACACCGGACCTAT
CGATCGTACTCAAACGCGGGCAATTCCGGATGGTGTCATACACCGACGCA
TCATTCGGAGCTAATCCCGACAACCGCAAGTCGACGACTGGATATATCTT
CTTCCTCGGCGGAGGACTCATCAGTTTCGGGTCCAAAACTCAGTCACTTA
CGGCTCAGTCGACAGTGGAGGGCGAACTTCAGGCACTCAGCTATGAAACA
AGGGAGGCGGTATACCTCTCCAACTTCCTGATATAA
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