mRNA_H-elongata_contig19364.5375.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19364.5375.1
Unique NamemRNA_H-elongata_contig19364.5375.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: D7G3X8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3X8_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 6.490e-128
Identity = 247/431 (57.31%), Postives = 278/431 (64.50%), Query Frame = 1 
Query:  265 MQQATELNCSIREMHLFLLEHFLDYVDLYESLPSKRSLMTEGEKDMIDLEVTSFMTACAAGVDALKALLQRERLRRIEQEVVAARAVEEDGEGREDGLFGG-GAGADLLPGSRPAHEHTAVTFLFERLRVVTEVAETMQSERHQRTAAKKSRFYGGPAVSRREAANGGNDGDAKVHSA--AAKGAWWKPTVEELEEERLLQEMLPGVYGQAPGREAPVNPDDSQKGDALPTTQSSTLGTVWRRESSGISPTVDAGGRAAATVAATNDEGRERRPVHEDPPRRAPGGPGVVAGIPGPMRRWGGRGRTTVSSALAAVADEE-TVNDGLVPSAVLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 1545
            MQQATELN SIREMH FL +HFLDYVD++  LPSKRSLM++ EKD+IDLEVTSFMTACAAGVDALKALLQRERLRR+EQE  AARA   DG G      GG GAG +L PGSRPAHE+ AVTFLFERL+ VTEVAE MQ+ERH R AA +SRFYGGPA S    A+GG   +A  H    AA  A W  T EELEEERLL+E LP  YG +      + P        L    ++  G   R ++    P + A    AA VA T   G                                                   + + G+V +AVLEGENRDLVARLKNELD+AR VETKM+EIS LMGLFASKVVEQQGGMEHVFDAAV  ND LVRGG+HLEKAV+RG  FRLFYAWFM+ ASFCLLFLHFFN
Sbjct:    1 MQQATELNYSIREMHTFLRQHFLDYVDVHHCLPSKRSLMSDEEKDLIDLEVTSFMTACAAGVDALKALLQRERLRRMEQEAAAARAEGADGRGSSLLDEGGVGAGGELRPGSRPAHENAAVTFLFERLKAVTEVAEAMQTERHARAAAGQSRFYGGPADS--SGASGGAGDEASRHGGPLAAASAVWGATPEELEEERLLRESLPAAYGDSSPSPPALTPAAEDLAGGLAGFATTAAGVPERSQT----PPLAADAADAAAVAETATAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSADGGVVSAAVLEGENRDLVARLKNELDDARLVETKMSEISGLMGLFASKVVEQQGGMEHVFDAAVSANDKLVRGGQHLEKAVQRGGGFRLFYAWFMMIASFCLLFLHFFN 425
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BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A7S3Y6Y2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Y2_HETAK)

HSP 1 Score: 87.0 bits (214), Expect = 9.730e-15
Identity = 46/100 (46.00%), Postives = 69/100 (69.00%), Query Frame = 1 
Query: 1243 VLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFF 1542
            VL+ EN +L+A L+NELD  +Q+E+KM EIS+LM LF++KV+EQQ  +E +   A   + N+ +G K+++KA E    FR  Y  F++  SF LLFLH++
Sbjct:  230 VLQEENHNLLADLQNELDSVKQIESKMAEISTLMSLFSTKVMEQQTEIEQLGTLAQKASTNIEQGNKYIDKASEIQGGFRKIYVTFIMTLSFILLFLHWY 329
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BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A662YRQ7_ACIRT (Syntaxin-18 n=4 Tax=Acipenseroidei TaxID=186622 RepID=A0A662YRQ7_ACIRT)

HSP 1 Score: 75.9 bits (185), Expect = 3.680e-11
Identity = 41/128 (32.03%), Postives = 74/128 (57.81%), Query Frame = 1 
Query: 1171 TTVSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            T V      + ++  V D L P  +   E EN+ LV  + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++++ +  V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++ +
Sbjct:  178 TDVQDTSFGLWEDGKVEDELSPEEIQMFEQENQRLVGEMNNLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHELVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYGS 305
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A834FF02_ORYME (Syntaxin-18 n=2 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834FF02_ORYME)

HSP 1 Score: 74.3 bits (181), Expect = 4.650e-11
Identity = 40/126 (31.75%), Postives = 76/126 (60.32%), Query Frame = 1 
Query: 1177 VSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            V  +  ++ +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  115 VQGSSVSLWEEGRVEDELSPEEIQMFEQENQRLVSEMSSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNLHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 240
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A4W4GYJ2_ELEEL (Syntaxin-18 n=3 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GYJ2_ELEEL)

HSP 1 Score: 75.5 bits (184), Expect = 5.770e-11
Identity = 42/127 (33.07%), Postives = 75/127 (59.06%), Query Frame = 1 
Query: 1174 TVSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            TVS     + ++  V D L P  +   E EN+ LV  + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++H+    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  192 TVSVGGVDLWEDNKVEDELSPEEIQMFEQENQRLVNEMDSLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDHIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 318
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A2I4BBN6_9TELE (Syntaxin-18 n=3 Tax=Rivulidae TaxID=28771 RepID=A0A2I4BBN6_9TELE)

HSP 1 Score: 75.5 bits (184), Expect = 6.100e-11
Identity = 39/117 (33.33%), Postives = 73/117 (62.39%), Query Frame = 1 
Query: 1204 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++ +  V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  207 EEGRVEDELSPEEIQMFEQENKRLVSEMNSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHELVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 323
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: UPI001F08520E (syntaxin-18 isoform X2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F08520E)

HSP 1 Score: 75.1 bits (183), Expect = 6.400e-11
Identity = 40/117 (34.19%), Postives = 71/117 (60.68%), Query Frame = 1 
Query: 1204 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            +E  V D L P  +   E EN+ LV+ + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++ +    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  186 EEGRVEDELSPEEIQMFEHENQRLVSEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIQNNAGFRVWILFFLVMCSFSLLFLDWYDS 302
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: UPI000C6D6EF1 (syntaxin-18-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D6EF1)

HSP 1 Score: 75.1 bits (183), Expect = 6.970e-11
Identity = 38/101 (37.62%), Postives = 63/101 (62.38%), Query Frame = 1 
Query: 1243 VLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 1545
            + E ENR L   +   +DE RQ+E K+ EIS L  +FA KV++Q+  +  + D  V T +N+  G + L +A+++ A FR++  +F++  SF LLFL ++N
Sbjct:  208 IFEQENRRLYEEMNTLVDEVRQIEGKVVEISRLQEIFAEKVLQQEQDINRISDTIVGTTENIKEGNEELREAMKKNAGFRVWILFFLIVISFSLLFLDWYN 308
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: H2MQE0_ORYLA (Syntaxin-18 n=6 Tax=Oryzias TaxID=8089 RepID=H2MQE0_ORYLA)

HSP 1 Score: 75.5 bits (184), Expect = 6.990e-11
Identity = 40/126 (31.75%), Postives = 76/126 (60.32%), Query Frame = 1 
Query: 1177 VSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 1548
            V  +  ++ +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  211 VQGSAVSLWEEGRVEDELSPEEIQMFEQENQRLVSEMSSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 336
[Close]
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A087XLM6_POEFO (Syntaxin-18 n=13 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A087XLM6_POEFO)

HSP 1 Score: 75.5 bits (184), Expect = 7.140e-11
Identity = 40/116 (34.48%), Postives = 71/116 (61.21%), Query Frame = 1 
Query: 1204 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 1545
            +E  V D L P  +   E EN+ LV+ + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL +++
Sbjct:  222 EEGRVEDELSPEEIQMFEQENQKLVSEMNNLVDEVRQIEGKVVEISRLQEIFAEKVLQQETDIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYD 337
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3X8_ECTSI6.490e-12857.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y6Y2_HETAK9.730e-1546.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A662YRQ7_ACIRT3.680e-1132.03Syntaxin-18 n=4 Tax=Acipenseroidei TaxID=186622 Re... [more]
A0A834FF02_ORYME4.650e-1131.75Syntaxin-18 n=2 Tax=Oryzias melastigma TaxID=30732... [more]
A0A4W4GYJ2_ELEEL5.770e-1133.07Syntaxin-18 n=3 Tax=Electrophorus electricus TaxID... [more]
A0A2I4BBN6_9TELE6.100e-1133.33Syntaxin-18 n=3 Tax=Rivulidae TaxID=28771 RepID=A0... [more]
UPI001F08520E6.400e-1134.19syntaxin-18 isoform X2 n=1 Tax=Hypomesus transpaci... [more]
UPI000C6D6EF16.970e-1137.62syntaxin-18-like n=1 Tax=Centruroides sculpturatus... [more]
H2MQE0_ORYLA6.990e-1131.75Syntaxin-18 n=6 Tax=Oryzias TaxID=8089 RepID=H2MQE... [more]
A0A087XLM6_POEFO7.140e-1134.48Syntaxin-18 n=13 Tax=Cyprinodontoidei TaxID=8087 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19364contigH-elongata_contig19364:430..6181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score404.8
Seed ortholog evalue5.5e-110
Seed eggNOG ortholog2880.D7G3X8
Preferred nameSTX18
KEGG koko:K08492
KEGG Pathwayko04130,ko04145,map04130,map04145
GOsGO:0000149,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005938,GO:0006810,GO:0006888,GO:0006890,GO:0006996,GO:0007029,GO:0007154,GO:0007267,GO:0007268,GO:0007274,GO:0007528,GO:0008150,GO:0009987,GO:0010256,GO:0010638,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0019904,GO:0023052,GO:0031201,GO:0031594,GO:0031984,GO:0032386,GO:0032388,GO:0032879,GO:0032991,GO:0033043,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045202,GO:0046907,GO:0048193,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050808,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060341,GO:0060627,GO:0060628,GO:0061024,GO:0061025,GO:0065007,GO:0071840,GO:0071944,GO:0090158,GO:0098796,GO:0098827,GO:0098916,GO:0099536,GO:0099537,GO:0099568,GO:1902115,GO:1902117,GO:1902953,GO:1903358
EggNOG free text desc.positive regulation of ER to Golgi vesicle-mediated transport
EggNOG OGsKOG3894@1,KOG3894@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-19_000920.1
Exons5
Model size2482
Cds size1434
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930103.0078776-UTR-H-elongata_contig19364:429..5461622930103.0078776-UTR-H-elongata_contig19364:429..546Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19364 430..546 +
1691679281.0871177-UTR-H-elongata_contig19364:429..5461691679281.0871177-UTR-H-elongata_contig19364:429..546Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19364 430..546 +
1622930103.1090326-UTR-H-elongata_contig19364:5250..61811622930103.1090326-UTR-H-elongata_contig19364:5250..6181Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19364 5251..6181 +
1691679281.168845-UTR-H-elongata_contig19364:5250..61811691679281.168845-UTR-H-elongata_contig19364:5250..6181Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19364 5251..6181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930103.0192509-CDS-H-elongata_contig19364:546..7021622930103.0192509-CDS-H-elongata_contig19364:546..702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 547..702 +
1691679281.1005864-CDS-H-elongata_contig19364:546..7021691679281.1005864-CDS-H-elongata_contig19364:546..702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 547..702 +
1622930103.03689-CDS-H-elongata_contig19364:951..10471622930103.03689-CDS-H-elongata_contig19364:951..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 952..1047 +
1691679281.110321-CDS-H-elongata_contig19364:951..10471691679281.110321-CDS-H-elongata_contig19364:951..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 952..1047 +
1622930103.0579002-CDS-H-elongata_contig19364:3143..34521622930103.0579002-CDS-H-elongata_contig19364:3143..3452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 3144..3452 +
1691679281.118498-CDS-H-elongata_contig19364:3143..34521691679281.118498-CDS-H-elongata_contig19364:3143..3452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 3144..3452 +
1622930103.0746424-CDS-H-elongata_contig19364:3826..44771622930103.0746424-CDS-H-elongata_contig19364:3826..4477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 3827..4477 +
1691679281.1388886-CDS-H-elongata_contig19364:3826..44771691679281.1388886-CDS-H-elongata_contig19364:3826..4477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 3827..4477 +
1622930103.0898466-CDS-H-elongata_contig19364:5028..52501622930103.0898466-CDS-H-elongata_contig19364:5028..5250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 5029..5250 +
1691679281.1568277-CDS-H-elongata_contig19364:5028..52501691679281.1568277-CDS-H-elongata_contig19364:5028..5250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19364 5029..5250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19364.5375.1prot_H-elongata_contig19364.5375.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19364 547..5250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19364.5375.1

>prot_H-elongata_contig19364.5375.1 ID=prot_H-elongata_contig19364.5375.1|Name=mRNA_H-elongata_contig19364.5375.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=478bp
MDLTKEWFVEVRRLRKQSGLSVGEGRGLSATAAAEAAGGSRWRAPLTPFM
QQATELNCSIREMHLFLLEHFLDYVDLYESLPSKRSLMTEGEKDMIDLEV
TSFMTACAAGVDALKALLQRERLRRIEQEVVAARAVEEDGEGREDGLFGG
GAGADLLPGSRPAHEHTAVTFLFERLRVVTEVAETMQSERHQRTAAKKSR
FYGGPAVSRREAANGGNDGDAKVHSAAAKGAWWKPTVEELEEERLLQEML
PGVYGQAPGREAPVNPDDSQKGDALPTTQSSTLGTVWRRESSGISPTVDA
GGRAAATVAATNDEGRERRPVHEDPPRRAPGGPGVVAGIPGPMRRWGGRG
RTTVSSALAAVADEETVNDGLVPSAVLEGENRDLVARLKNELDEARQVET
KMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVER
GAAFRLFYAWFMLGASFCLLFLHFFNT*
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mRNA from alignment at H-elongata_contig19364:430..6181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19364.5375.1 ID=mRNA_H-elongata_contig19364.5375.1|Name=mRNA_H-elongata_contig19364.5375.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5752bp|location=Sequence derived from alignment at H-elongata_contig19364:430..6181+ (Himanthalia elongata Himel1 dioecious)
AGATCGCTCTCTGCAACTCTGCAAGTTGATAGCCCAAAACAAAAAGGAGT
ACTGTCGTGCGTAGCGCCCATCACCTTCCGACGTGTTCAGTGCTGTAGCA
GCCAATGTTGTCTTAAAATGGATCTGACGAAAGAGTGGTTTGTAGAGGTC
AGGAGACTGCGAAAACAATCCGGTCTATCGGTTGGGGAAGGCAGAGGATT
GTCCGCGACTGCTGCAGCGGAGGCTGCCGGTGGGTCAAGATGGCGGGCTC
CTCTTACCCCCTTTATGCAACAGGTTGGTGTGAAATGAAGGATGGACGCT
TGGGGCGCTGTCGCCATCCAGTTTGAATTGGCGCTCTTGAATTTCGTATC
CCAGCAGCCCGTAGATCAACGAGGAGAGCCGTTTTCACGAACTTGTGTTC
GACCGAGTAGCATGTCGTCTTAGTCTGCAGCTCATTCCATGCCGTGGTTG
TGAGGTGTGACGTATGTTGTGATGTAAAACCACGGCATCGAGCCTGACTA
TCGAGATGCGTCGTATTCTCAGGCAACGGAGCTAAACTGCAGCATTCGCG
AGATGCATTTATTTCTACTGGAGCACTTCCTTGATTACGTGGACCTATAC
GAGAGCCTTCCCTCGAAGGTACTTAATCCATTGACAAAACTAGTAGTCCT
ACGAATAAGCTGTGGATGGTCGGAAGGTTTGAATGAGTGCATATGTTTGT
TTGTTTTCTAATAAGCTACGATTTATCATATGTGAAGATTTTGTACTCAA
GGTCATTATAGTACACGTTCGAACCTGACGATAGTTGGTCCCCTGGACTG
CACCTCTCATGGTGCTAAGAAGGCGTGGATGTTCGGAGGGTTGGAATGAG
TTCAAGTTTGTTTTTTTAGATAAAGATAACATTATACAAGTACTTTATTT
TTATTTATTTCAATCTGATATCATTCAAACCTTAAACCTTGTGAACTCCC
AAACCTTATTTTCTACTTTGTACAAAACACAGAAGTTAAAACAGTAGACT
ATCACGTATAATCGACTCTGTACGAGTACTTGAGGGGTATCGTCGTGACG
CGTGTAGAAGCTTCAGCTGTTCCCAGGTGGTTGTGCCTAACAAGGAATTT
TGCGGCGATTTCGGATGACTATCCCCTATCCCCCGATGGTGCAATGCTGT
CGTAGCAGAATGACGTCACCAAGATGTGACCCGTTGACCTCGGTTCTTTT
TTTGACGCCACACCACAAACTGACCGCGCCGTATTGATTGGCAATCAATC
GCGTATACTATATCTAGTATATCTAGTATAATCTCTCTCTGTGTATGCGT
GTGTGTATTTATTAAATTGCACATAACCGCGCAATTCGGCTCTTTCATGC
TAGCTCTTCTAGGCAACTCTCGCATTGATCCTCCCAATGGAGGATTCAAT
CATATTTGCTACAAAAACCTATATTAATGATCAGACGTGACAAAGGAGAC
ATAACTATCTCTACATTTCGTATCTAAGCCATCAATAATCAATAGTCAAT
ACCTTGCACTTCCTTTTTTCTCACTGTGTGTGACGTCATTGATAAACCGG
GGTAATAACTTGAAAGAGCACACACACACGCCTCGTACTGTAGTATAATC
TTAGAACATTCTCCGATCTTATCTCTCTTAGAATAGGGACGATCTCTGAG
GGTGGCTGTACCGCGGTACATGCGGTTTTGCACGGTTTTGGGCGATTTCG
AAAGTTTACGAGACTGATATGGTATGGTATGGTTCACTGAACCACCTGGA
ACCGACTGTACGGTACGATATGTTGACCAGTTATGACGGTTCGTAGAAAT
TTCTACGGGAAAAAAAATGTTCGTGACGATACCTGGGTCGAAAAAATCAC
AGTACGAATCTATTTGGGATTTGTACCGTGAAAAACTCTGGATATTTCGA
TGACATCGTCTGGAACATCGAAAGCCCCATTGCCGCAAAAACGATGCGGT
ATGCTGAGAGTCGCTCGGCGAGGAGGACCTGGTGGTTACCGTAACGCATA
GTTCCCCTGGCCATCACTGTAAGTGGAGGAAGACAACCAAGGTTGAAGGT
AGAGCGGGCTGTAGTGACGCGATCGCCATCCTCGAAAGCCGCAGGCAATT
CCATGGCCTGAATATTGTACTCAAGCATGTCAGCGATGTGACGCCGGGTT
GGCCGCGGCATCTGTGGAGGCCCACGCCTTCAACGTGAAGTTTTGCGTAG
CCGGCTGTAGTGATCTGATATGTAGCTTTTTCCAAGAGCACTTAAGAAAA
GTCTTCGAAGACGGTTTTCAATAGACTCCGATCTCTTGAGAAAATGGATA
CCCCCCATGTTCATGAAGCCCGGCCTCACTCAGTCGATTCTGGGGAATGA
TTATGAAAAACCCATGTTTACGATGACGTAAGAATTTTATTCTTAAACTA
GAAAACTTTAAATGGGCCGTTTTCATTTTTCCAGAATCCCGGCATACAAA
TGGGAACGACTAAATGCAGGACGCACCTGCAAGCGCATTTATGCAGGACG
GAAAAACTACTTAAAGTAGTATCGCTCTTAAGTTTTTGGTAGACCCAACC
CCGACCCGACCCTAACCCACACCCACACCCAATACTAGTTGTAAGTAATT
TCTCCGTCCTGCAGAAATGCGCTTGCAGGTGCGTCCTGTATTTAGGGGTT
CTCCATACAAATTAGTATCGAAGTCCTAATATTGCGTCAACCGCCAAACG
TCCGCATCTCGCAGAGGTCGCTCATGACAGAAGGTGAAAAGGATATGATA
GACCTAGAGGTGACCTCTTTCATGACTGCTTGCGCGGCCGGAGTCGACGC
TCTCAAGGCCTTGCTCCAACGAGAACGCCTTCGAAGGATAGAGCAAGAGG
TTGTCGCCGCTAGGGCCGTGGAGGAGGACGGCGAGGGACGAGAAGATGGA
TTATTTGGGGGAGGGGCCGGGGCAGATCTGCTGCCAGGATCGAGACCGGC
GCACGAGCACACCGCTGTCACGTTCCTGTTTGAGCGGCTGAGGGTGGTCA
CGGAGGTCGCGGAGACCATGCAGGTGAACCATACACAACTTGTGTATGTC
GTGTAACGATATCGTCCGATTGAATTGGGAGAGGGAGCAAGAAAAGTACG
CCCACTTTTTACTGCACACGATTGAGATTGCCTCGGATGTCTGGCTTCGC
GCTGAGCCATAAAGAAAAAAGTATCCATGCGAATCGGGTTGGAGGAACAA
TTGAGCGCGGTCTCTTGGTTTTTGCGCTCCGAAGGCGCTCTATTGAGGCT
GCTCGAACCGCCCTTTCCTTTATGTCCCCCCCCTACATCATCACCACCAC
TTATATCGCTCACGACTAAGCCTCAAGTTTTCCGTCTCGCCCGATCGCCA
CTGAAATTCCCGATGTTGAACCGTACCGCACCAATTACCGCGGCAAGAGT
GAAAGGCACCAGAGGACAGCGGCAAAAAAGTCACGTTTCTACGGAGGTCC
AGCGGTGAGCCGCAGGGAAGCCGCCAACGGTGGTAACGACGGCGATGCTA
AGGTACATTCTGCTGCCGCCAAGGGCGCATGGTGGAAGCCTACCGTTGAA
GAGCTCGAGGAGGAACGCCTGCTCCAGGAGATGCTGCCAGGGGTATACGG
CCAGGCACCGGGGCGAGAAGCTCCGGTCAATCCCGACGATAGCCAGAAGG
GCGACGCCCTCCCGACGACGCAATCGTCGACGCTGGGGACGGTGTGGCGG
CGTGAGAGCTCTGGGATTTCACCAACGGTTGATGCCGGAGGCAGAGCTGC
GGCTACGGTGGCGGCAACCAACGACGAGGGACGAGAACGACGACCCGTCC
ACGAAGACCCACCGAGGCGAGCACCAGGAGGGCCTGGCGTTGTGGCGGGT
ATCCCGGGGCCAATGCGACGATGGGGAGGGCGAGGGAGGACAACGGTATC
TTCAGCCTTGGCGGCAGTGGCAGATGAAGAGACGGTGAATGATGGTCTTG
TTCCGTCGGCGGTCCTCGAGGGTGAGAATCGGGACCTGGTAGCCAGGCTG
AAGAACGAGCTGGACGAGGCGCGTCAGGTGGAGACCAAGATGACCGAGGT
GTGTAGATGGTGGAGAGCGGTCGCCACAGGGGCGCGCGATAGCGTCTTTT
GTCCCGCGTGCGACGTGGCTCTCGTCATGTTTTGCGCGTGCTGTGGCGAC
ACTCTTCGTCGCGTCTACCGGTATAACAGTACACTACTATGCGCACGACC
AAATCTTCCTGGGGGTGGTACTCGTGCCCTCGGACGTCCTGTGCGAAAGT
TGATTTTTGTGAAACTCTGCTAGAATTATTCGAACAAGATCGAAAAACAC
GCATTGTTGGGACCCGAAGGTCGCGCCCCCTGTTGCTCTTACATTATGCC
AATTGGGACCATTCATAACCCCTCCACCCTCTCTCTCTCTCGTGGTTCTC
GCCGAACAGGGAAAAACAAATCGTTAGTTTATTTCCTTCCTTTTTGGCGA
AGAAATTGAGCTGCGCAGCACCTTAGTATGATATGAACTGCGCAGACCCC
CTCCTGCCCCCCCCCCCCTACCGCGCGCCCCCTGCCTATATACCCGACGA
ATGCCCGATGCTCTTTCGCCACGCCACGCGGCCCGCGCGCGCCCGACAGA
TCTCGAGCCTCATGGGCTTGTTCGCGTCGAAGGTCGTAGAGCAACAAGGG
GGAATGGAGCACGTGTTTGACGCCGCGGTGTTGACGAATGATAACCTCGT
CCGCGGCGGGAAACACTTGGAGAAGGCGGTGGAGCGAGGAGCAGCGTTCC
GTCTGTTTTACGCGTGGTTCATGCTCGGGGCTTCTTTTTGTCTACTGTTT
TTACATTTTTTTAATACATAATTAGTGTTAGAAGGGTCTCGATTCCGAGT
TTTCTCTGCCTCTTGAGCGTAGCCGAGTGTTTTTTCACTGTGGGTGGGTG
GTGGTGGCGCATTATGTGCCTTTTCCCGAGGCAAGAGGCAGGAAAAATTA
AAAACGCCTCTTTTCGTGGAAAACATCTTAACGATGCTCTCATTTATCAC
GCCAAGAAAATTTCAACGCCACCACTTCATGTTCCATACAGAAAATTAGT
TTCTTGCGTGGAATTTTCGTCATATTCTTCTATTGTGACCTCTCGGATGG
ACGAGCCAGCAAAAGCTAACCTGGCTGCAATTAATAATTGGCTCGAGAAG
AAAAAAAACACTGTTCTGTGATCGATCGTCCAAACCAACAAATAACTTAA
CCCTTGGAGAAAAGTTTGTTGTGAGGTTTGTAGACGATAGAAGAGGGCAA
AAAGAAGATCCGGTTCCTTGAAGGGCTAACTCGTTTGGGTTATCGCGAGA
TAGAAAATGGACGCCCGCGTACGTTTACGATTTAAAGAACACAGTACCTA
GCAAGGGATCCCGCTAGATAACACACCAAATATCGCGAAGTCGAATTCGA
CGAGGTGCAACCTCGAGAACGGGGTTTCCATACTGGTACTGTGGACGTTA
CTTTAAAGTCAAGCTACGGGGCGGGGGGGAGCGGCAGATCTTGAGACGGC
CGAAAAAAACTGGGATGCTCGACCACCGAAGAAGCCAGTTCGCGTGGCCC
GAGACACCGTTCTGACTGTACTGACTTCGACTTCAAAGGCGTCCAGCGCG
CCATCCGTGTTATATATACATGTAAATATTATAAATATTACAACGCGTTA
CATCAGTTCCATCCAGCGGATGGCGAGGGCTCTTTCAACACGAAGTCACG
AAGGTTTCAACCCCGAGGCGTTATCGGTGTCGTGCGCGATGGGAATAGGA
AG
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Coding sequence (CDS) from alignment at H-elongata_contig19364:430..6181+

>mRNA_H-elongata_contig19364.5375.1 ID=mRNA_H-elongata_contig19364.5375.1|Name=mRNA_H-elongata_contig19364.5375.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2868bp|location=Sequence derived from alignment at H-elongata_contig19364:430..6181+ (Himanthalia elongata Himel1 dioecious)
ATGGATCTGACGAAAGAGTGGTTTGTAGAGGTCAGGAGACTGCGAAAACA
ATCCGGTCTATCGGTTGGGGAAGGCAGAGGATTGTCCGCGACTGCTGCAG
CGGAGGCTGCCGGTGGGTCAAGATGGCGGGCTCCTCTTACCCCCTTTATG
CAACAGATGGATCTGACGAAAGAGTGGTTTGTAGAGGTCAGGAGACTGCG
AAAACAATCCGGTCTATCGGTTGGGGAAGGCAGAGGATTGTCCGCGACTG
CTGCAGCGGAGGCTGCCGGTGGGTCAAGATGGCGGGCTCCTCTTACCCCC
TTTATGCAACAGGCAACGGAGCTAAACTGCAGCATTCGCGAGATGCATTT
ATTTCTACTGGAGCACTTCCTTGATTACGTGGACCTATACGAGAGCCTTC
CCTCGAAGGCAACGGAGCTAAACTGCAGCATTCGCGAGATGCATTTATTT
CTACTGGAGCACTTCCTTGATTACGTGGACCTATACGAGAGCCTTCCCTC
GAAGAGGTCGCTCATGACAGAAGGTGAAAAGGATATGATAGACCTAGAGG
TGACCTCTTTCATGACTGCTTGCGCGGCCGGAGTCGACGCTCTCAAGGCC
TTGCTCCAACGAGAACGCCTTCGAAGGATAGAGCAAGAGGTTGTCGCCGC
TAGGGCCGTGGAGGAGGACGGCGAGGGACGAGAAGATGGATTATTTGGGG
GAGGGGCCGGGGCAGATCTGCTGCCAGGATCGAGACCGGCGCACGAGCAC
ACCGCTGTCACGTTCCTGTTTGAGCGGCTGAGGGTGGTCACGGAGGTCGC
GGAGACCATGCAGAGGTCGCTCATGACAGAAGGTGAAAAGGATATGATAG
ACCTAGAGGTGACCTCTTTCATGACTGCTTGCGCGGCCGGAGTCGACGCT
CTCAAGGCCTTGCTCCAACGAGAACGCCTTCGAAGGATAGAGCAAGAGGT
TGTCGCCGCTAGGGCCGTGGAGGAGGACGGCGAGGGACGAGAAGATGGAT
TATTTGGGGGAGGGGCCGGGGCAGATCTGCTGCCAGGATCGAGACCGGCG
CACGAGCACACCGCTGTCACGTTCCTGTTTGAGCGGCTGAGGGTGGTCAC
GGAGGTCGCGGAGACCATGCAGAGTGAAAGGCACCAGAGGACAGCGGCAA
AAAAGTCACGTTTCTACGGAGGTCCAGCGGTGAGCCGCAGGGAAGCCGCC
AACGGTGGTAACGACGGCGATGCTAAGGTACATTCTGCTGCCGCCAAGGG
CGCATGGTGGAAGCCTACCGTTGAAGAGCTCGAGGAGGAACGCCTGCTCC
AGGAGATGCTGCCAGGGGTATACGGCCAGGCACCGGGGCGAGAAGCTCCG
GTCAATCCCGACGATAGCCAGAAGGGCGACGCCCTCCCGACGACGCAATC
GTCGACGCTGGGGACGGTGTGGCGGCGTGAGAGCTCTGGGATTTCACCAA
CGGTTGATGCCGGAGGCAGAGCTGCGGCTACGGTGGCGGCAACCAACGAC
GAGGGACGAGAACGACGACCCGTCCACGAAGACCCACCGAGGCGAGCACC
AGGAGGGCCTGGCGTTGTGGCGGGTATCCCGGGGCCAATGCGACGATGGG
GAGGGCGAGGGAGGACAACGGTATCTTCAGCCTTGGCGGCAGTGGCAGAT
GAAGAGACGGTGAATGATGGTCTTGTTCCGTCGGCGGTCCTCGAGGGTGA
GAATCGGGACCTGGTAGCCAGGCTGAAGAACGAGCTGGACGAGGCGCGTC
AGGTGGAGACCAAGATGACCGAGAGTGAAAGGCACCAGAGGACAGCGGCA
AAAAAGTCACGTTTCTACGGAGGTCCAGCGGTGAGCCGCAGGGAAGCCGC
CAACGGTGGTAACGACGGCGATGCTAAGGTACATTCTGCTGCCGCCAAGG
GCGCATGGTGGAAGCCTACCGTTGAAGAGCTCGAGGAGGAACGCCTGCTC
CAGGAGATGCTGCCAGGGGTATACGGCCAGGCACCGGGGCGAGAAGCTCC
GGTCAATCCCGACGATAGCCAGAAGGGCGACGCCCTCCCGACGACGCAAT
CGTCGACGCTGGGGACGGTGTGGCGGCGTGAGAGCTCTGGGATTTCACCA
ACGGTTGATGCCGGAGGCAGAGCTGCGGCTACGGTGGCGGCAACCAACGA
CGAGGGACGAGAACGACGACCCGTCCACGAAGACCCACCGAGGCGAGCAC
CAGGAGGGCCTGGCGTTGTGGCGGGTATCCCGGGGCCAATGCGACGATGG
GGAGGGCGAGGGAGGACAACGGTATCTTCAGCCTTGGCGGCAGTGGCAGA
TGAAGAGACGGTGAATGATGGTCTTGTTCCGTCGGCGGTCCTCGAGGGTG
AGAATCGGGACCTGGTAGCCAGGCTGAAGAACGAGCTGGACGAGGCGCGT
CAGGTGGAGACCAAGATGACCGAGATCTCGAGCCTCATGGGCTTGTTCGC
GTCGAAGGTCGTAGAGCAACAAGGGGGAATGGAGCACGTGTTTGACGCCG
CGGTGTTGACGAATGATAACCTCGTCCGCGGCGGGAAACACTTGGAGAAG
GCGGTGGAGCGAGGAGCAGCGTTCCGTCTGTTTTACGCGTGGTTCATGCT
CGGGGCTTCTTTTTGTCTACTGTTTTTACATTTTTTTAATACATAAATCT
CGAGCCTCATGGGCTTGTTCGCGTCGAAGGTCGTAGAGCAACAAGGGGGA
ATGGAGCACGTGTTTGACGCCGCGGTGTTGACGAATGATAACCTCGTCCG
CGGCGGGAAACACTTGGAGAAGGCGGTGGAGCGAGGAGCAGCGTTCCGTC
TGTTTTACGCGTGGTTCATGCTCGGGGCTTCTTTTTGTCTACTGTTTTTA
CATTTTTTTAATACATAA
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