mRNA_H-elongata_contig19330.5359.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19330.5359.1
Unique NamemRNA_H-elongata_contig19330.5359.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: D8LGL7_ECTSI (Protein kinase domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=D8LGL7_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 1.920e-240
Identity = 328/342 (95.91%), Postives = 334/342 (97.66%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRANQGKPLAAHQEASNQSRVAAQQ 1027
            RVYADVNV RPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYI+ELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGTDELFNYLDKY+LELDPHFDGIMGRHSNRPWQKFVN ENQHLVSE+AISFVGQLLRYDHQERLTAKDAM+HPYF  VRANQGKP+AAH EAS QSR AA Q
Sbjct:    5 RVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNTENQHLVSEDAISFVGQLLRYDHQERLTAKDAMDHPYFQAVRANQGKPVAAHNEASEQSRAAAAQ 346
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: B8BUK1_THAPS (Protein kinase domain-containing protein n=16 Tax=Bacillariophyta TaxID=2836 RepID=B8BUK1_THAPS)

HSP 1 Score: 604 bits (1558), Expect = 9.000e-213
Identity = 282/319 (88.40%), Postives = 306/319 (95.92%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVR 958
            RVYADVNV RPR+YWDYE+L VNWGDQEDYEVVRKIGRGKYSEVFEG NV NN+KCVIKILKPVKKKKIKREIKILQN+CGGTNIIQLLDVVRDPQSKTPSL+FE++NNTDFK+LYPTL+D+DIRYYI+ELLKALDY HSNG+MHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGT+ELF+YLD YDLELDPHFDGI+GRHS +PWQKFV  +NQHL+SEEAI FV +LLRYDHQERL+AK+AM HPYFA VR
Sbjct:    5 RVYADVNVHRPRDYWDYEALTVNWGDQEDYEVVRKIGRGKYSEVFEGHNVGNNSKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDFDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNDNQHLISEEAIDFVSKLLRYDHQERLSAKEAMSHPYFAPVR 323
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A7S2Y1K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K0_9STRA)

HSP 1 Score: 604 bits (1558), Expect = 1.400e-212
Identity = 284/319 (89.03%), Postives = 302/319 (94.67%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVR 958
            RVYAD+NV RPREYWDYESLVVNWGDQEDYEV+RKIGRGKYSEVFEG+NV+NNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQL+DVVRDPQSKTPSLVFEYINNTDFK+LYPTLTD D RYYIYELLKALDY HSNGIMHRDVKPHNVMIDHE++ LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGTDELF YLD YDLELDP FDGI+GRH+ +PWQ+FV  +NQHLV+EEAI FV  LLRYDHQERLTA++AM HPYFA +R
Sbjct:    5 RVYADINVHRPREYWDYESLVVNWGDQEDYEVIRKIGRGKYSEVFEGVNVVNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLMDVVRDPQSKTPSLVFEYINNTDFKILYPTLTDLDTRYYIYELLKALDYCHSNGIMHRDVKPHNVMIDHERRHLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDYQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFQYLDTYDLELDPQFDGILGRHTKKPWQRFVTTDNQHLVTEEAIDFVSNLLRYDHQERLTAQEAMAHPYFAPIR 323
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: K0SUK6_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUK6_THAOC)

HSP 1 Score: 603 bits (1555), Expect = 1.080e-209
Identity = 279/319 (87.46%), Postives = 306/319 (95.92%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVR 958
            RVYADVNV RPR+YWDYE+L VNWGDQEDYEV+RKIGRGKYSEVFEG+NV NN+KCVIKILKPVKKKKIKREIKILQN+CGGTNIIQLLDVVRDPQSKTPSL+FE++NNTDFK+LYPTL+DYDIRYYI+ELLKALDY HSNG+MHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGT+ELF+YLD YDLELDPHFDGI+GRHS +PWQKFV  ENQHL+S+E+I FV +LLRYDHQERL+AK+AM HPYF  VR
Sbjct:  120 RVYADVNVHRPRDYWDYEALTVNWGDQEDYEVIRKIGRGKYSEVFEGVNVSNNSKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDYDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNENQHLISDESIDFVSKLLRYDHQERLSAKEAMSHPYFEPVR 438
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A7S2W3V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3V8_9STRA)

HSP 1 Score: 586 bits (1511), Expect = 2.980e-205
Identity = 275/323 (85.14%), Postives = 299/323 (92.57%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRANQG 970
            RV+ADVNV RP+EYWDYESL VNWG+Q+DYEV+RKIGRGKYSEVFEGMNV+N  +CV+KILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFE+INNTDFK LYPTL+DYDIRYYI ELLKAL+Y HSNGIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGTDEL  YLD+Y+LELDP FDG++GRHS +PWQ F+N ENQHL S EAI +VG LLRYDHQERLTA++AM HPYF  V   +G
Sbjct:   11 RVHADVNVHRPKEYWDYESLAVNWGEQDDYEVIRKIGRGKYSEVFEGMNVMNAVRCVVKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEHINNTDFKQLYPTLSDYDIRYYILELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELIQYLDRYELELDPQFDGLIGRHSKKPWQNFLNSENQHLCSPEAIDYVGSLLRYDHQERLTAQEAMAHPYFLPVTQREG 333
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A6U3WIC2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3WIC2_9STRA)

HSP 1 Score: 585 bits (1509), Expect = 5.180e-205
Identity = 276/330 (83.64%), Postives = 304/330 (92.12%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRANQGKPLAAHQ 991
            RVY++VN  RPREY+DYESLVVNWGDQEDYEV+RKIGRGKYSEVFEGMNV+NNT+CV+KILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFK+LYPTLTDYDIRYYIYELLKALDY HSNGIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYH GREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAK+LGT+ELF+YLD+YDLELDP F+G++GRH+ +PW KF+  ENQHL   EAI F   LL+YDHQ+RLTA++AM H Y A +++     LAAH+
Sbjct:    5 RVYSNVNEQRPREYYDYESLVVNWGDQEDYEVIRKIGRGKYSEVFEGMNVMNNTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKLLYPTLTDYDIRYYIYELLKALDYCHSNGIMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHQGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFSYLDQYDLELDPQFEGLLGRHARKPWNKFLTSENQHLCPPEAIEFADALLKYDHQDRLTAQEAMHHNYLAPIQSAHLNRLAAHE 334
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A812SZF3_SYMMI (CKA4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SZF3_SYMMI)

HSP 1 Score: 581 bits (1497), Expect = 1.180e-203
Identity = 271/323 (83.90%), Postives = 300/323 (92.88%), Query Frame = 2 
Query:    5 VYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRANQGK 973
            VYAD+NV RP EYWDYE+L +NWGDQ+DYEVVRKIGRGKYSEVFEG+N LN TKCV+KILKPVKKKKIKREIKILQNLCGGTNII+LLDVVRDPQSKTPSL+FE+INNTDFKVLYPTL DYDIRYYI+ELLKALD+ H+NGIMHRDVKPHNVMIDH++++LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY LDMWSLGCMFAGMIFRKEPFFHG DNYDQLVKIAK+LGTDELF YLD+YDLELD HFDG++GRH+ + W +F+N ENQHLVSEEA+SF+  LLRYDHQERLTA++AM HPYF  VR   G+
Sbjct:    1 VYADINVHRPPEYWDYENLSINWGDQDDYEVVRKIGRGKYSEVFEGVNSLNGTKCVVKILKPVKKKKIKREIKILQNLCGGTNIIRLLDVVRDPQSKTPSLIFEHINNTDFKVLYPTLLDYDIRYYIFELLKALDFCHANGIMHRDVKPHNVMIDHDKRELRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYGLDMWSLGCMFAGMIFRKEPFFHGQDNYDQLVKIAKVLGTDELFEYLDRYDLELDSHFDGLLGRHTKKSWNRFINAENQHLVSEEAMSFLSGLLRYDHQERLTAQEAMAHPYFQPVRDANGE 323
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A7S3JX24_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX24_9STRA)

HSP 1 Score: 572 bits (1474), Expect = 1.970e-199
Identity = 270/319 (84.64%), Postives = 293/319 (91.85%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVR 958
            RVYADVN  RPREYWDYESL VNWG+QEDYEV+RKIGRGKYSEVFEG+NV+NN KCVIKILKPVKKKKIKREIKILQNLCGG NIIQLLDVVRDPQSKTPSL+FEY+NNTDFKVLYPTL D +IRYYI+ELLKALD  HSNGIMHRDVKPHNVMIDHEQK+LRLIDWGLAEFYH GREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCM AGMIFRKEPFFHGHDNYDQLVKIAK+LGT++LF YLD+YDLELDPHFDG++GR + +PW KF+  EN  LVS EAI FV +LLRYDHQERLTA+++M H YF  +R
Sbjct:    5 RVYADVNANRPREYWDYESLTVNWGEQEDYEVIRKIGRGKYSEVFEGINVVNNCKCVIKILKPVKKKKIKREIKILQNLCGGENIIQLLDVVRDPQSKTPSLIFEYVNNTDFKVLYPTLNDLEIRYYIFELLKALDVCHSNGIMHRDVKPHNVMIDHEQKKLRLIDWGLAEFYHSGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMVAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEDLFAYLDQYDLELDPHFDGLLGRQAKKPWTKFITPENSMLVSPEAIDFVSKLLRYDHQERLTAQESMMHDYFMPIR 323
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A0D6R2X5_ARACU (Protein kinase domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R2X5_ARACU)

HSP 1 Score: 575 bits (1481), Expect = 2.330e-199
Identity = 267/320 (83.44%), Postives = 296/320 (92.50%), Query Frame = 2 
Query:    2 RVYADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRA 961
            RVYADVNV+RP++YWDYESL V WGDQEDYEVVRK+GRGKYSEVFEG+N  NN  CVIKILKPVKKKKIKREIKILQNLCGG NII+LLD+VRD QSKTPSL+FEY+NNTDFKVLYPTLTDYDIRYYIYE+LKALDY HS GIMHRDVKPHNVMIDHEQ++LRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVDLQ+YDYSLDMWSLGCMFAGMIFRKEPFF+GHDNYDQLVKIAK+LGTDEL  YL+KY LELDPH + ++GRHS +PW KF+N +NQHLVS EA+ F+ +LLRYDHQER TA++AM HPYF +VRA
Sbjct:  114 RVYADVNVIRPKDYWDYESLTVQWGDQEDYEVVRKVGRGKYSEVFEGINTTNNEPCVIKILKPVKKKKIKREIKILQNLCGGPNIIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEILKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRLELDPHLEALVGRHSRKPWSKFINSDNQHLVSPEALDFLDKLLRYDHQERQTAREAMAHPYFNQVRA 433
[Close]
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Match: A0A7S0F5I5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F5I5_9EUKA)

HSP 1 Score: 570 bits (1468), Expect = 7.720e-199
Identity = 267/324 (82.41%), Postives = 298/324 (91.98%), Query Frame = 2 
Query:   11 ADVNVLRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFNYLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLRYDHQERLTAKDAMEHPYFAEVRANQGKPLA 982
            ADVN+ RPREYWDYESL V+WG+Q+ YEVVRK+GRGKYSEVFEG+NV NNTKC+IKILKPVKKKKIKREIKILQNLCGGTNIIQLLD+VRDPQSKTPSL+FEY+NNTDFK LYPTLTDYDIRYYI+ELLKAL+Y HS+GIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYH  REYNVRVASRYFKGPELLVDLQ+YDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKI K+LGTDELF+YLDKY+LELDP FDGI+GRH+ +PW KF+  ENQHLV+ EAI  + +LLRYDHQERL+  +AM+H YFA V+A +G   A
Sbjct:    8 ADVNMNRPREYWDYESLQVSWGEQDHYEVVRKVGRGKYSEVFEGVNVTNNTKCIIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDIVRDPQSKTPSLIFEYVNNTDFKTLYPTLTDYDIRYYIHELLKALEYCHSHGIMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHLEREYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIVKVLGTDELFDYLDKYNLELDPQFDGILGRHTRKPWTKFITPENQHLVTPEAIDLLDKLLRYDHQERLSPVEAMQHLYFAPVKAKEGATAA 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19330.5359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL7_ECTSI1.920e-24095.91Protein kinase domain-containing protein n=3 Tax=P... [more]
B8BUK1_THAPS9.000e-21388.40Protein kinase domain-containing protein n=16 Tax=... [more]
A0A7S2Y1K0_9STRA1.400e-21289.03Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
K0SUK6_THAOC1.080e-20987.46Protein kinase domain-containing protein (Fragment... [more]
A0A7S2W3V8_9STRA2.980e-20585.14Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6U3WIC2_9STRA5.180e-20583.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812SZF3_SYMMI1.180e-20383.90CKA4 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S3JX24_9STRA1.970e-19984.64Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0D6R2X5_ARACU2.330e-19983.44Protein kinase domain-containing protein n=2 Tax=A... [more]
A0A7S0F5I5_9EUKA7.720e-19982.41Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19330contigH-elongata_contig19330:599..7091 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score581.3
Seed ortholog evalue2.7e-163
Seed eggNOG ortholog2880.D8LGL7
Preferred nameCKA2
KEGG koko:K03097
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005956,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010019,GO:0010212,GO:0010225,GO:0010229,GO:0010332,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022414,GO:0022607,GO:0023052,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0040008,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046777,GO:0048367,GO:0048511,GO:0048580,GO:0048583,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0051726,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090567,GO:0140096,GO:1901360,GO:1901564,GO:2000026,GO:2000028,GO:2000241,GO:2001020
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0668@1,KOG0668@2759
EC2.7.11.1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-10_002680.1
Exons6
Model size1850
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19330.5359.1prot_H-elongata_contig19330.5359.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19330 741..6298 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930101.3772154-UTR-H-elongata_contig19330:598..7401622930101.3772154-UTR-H-elongata_contig19330:598..740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19330 599..740 +
1691679280.442904-UTR-H-elongata_contig19330:598..7401691679280.442904-UTR-H-elongata_contig19330:598..740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19330 599..740 +
1622930101.4714603-UTR-H-elongata_contig19330:6298..70911622930101.4714603-UTR-H-elongata_contig19330:6298..7091Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19330 6299..7091 +
1691679280.51035-UTR-H-elongata_contig19330:6298..70911691679280.51035-UTR-H-elongata_contig19330:6298..7091Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19330 6299..7091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930101.3892317-CDS-H-elongata_contig19330:740..8111622930101.3892317-CDS-H-elongata_contig19330:740..811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 741..811 +
1691679280.4552212-CDS-H-elongata_contig19330:740..8111691679280.4552212-CDS-H-elongata_contig19330:740..811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 741..811 +
1622930101.4064417-CDS-H-elongata_contig19330:2632..27941622930101.4064417-CDS-H-elongata_contig19330:2632..2794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 2633..2794 +
1691679280.465266-CDS-H-elongata_contig19330:2632..27941691679280.465266-CDS-H-elongata_contig19330:2632..2794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 2633..2794 +
1622930101.4217265-CDS-H-elongata_contig19330:3812..40051622930101.4217265-CDS-H-elongata_contig19330:3812..4005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 3813..4005 +
1691679280.4748724-CDS-H-elongata_contig19330:3812..40051691679280.4748724-CDS-H-elongata_contig19330:3812..4005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 3813..4005 +
1622930101.4325724-CDS-H-elongata_contig19330:4597..47441622930101.4325724-CDS-H-elongata_contig19330:4597..4744Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 4598..4744 +
1691679280.4841776-CDS-H-elongata_contig19330:4597..47441691679280.4841776-CDS-H-elongata_contig19330:4597..4744Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 4598..4744 +
1622930101.444813-CDS-H-elongata_contig19330:5543..57111622930101.444813-CDS-H-elongata_contig19330:5543..5711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 5544..5711 +
1691679280.4933548-CDS-H-elongata_contig19330:5543..57111691679280.4933548-CDS-H-elongata_contig19330:5543..5711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 5544..5711 +
1622930101.4593124-CDS-H-elongata_contig19330:6124..62981622930101.4593124-CDS-H-elongata_contig19330:6124..6298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 6125..6298 +
1691679280.5030115-CDS-H-elongata_contig19330:6124..62981691679280.5030115-CDS-H-elongata_contig19330:6124..6298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19330 6125..6298 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19330.5359.1

>prot_H-elongata_contig19330.5359.1 ID=prot_H-elongata_contig19330.5359.1|Name=mRNA_H-elongata_contig19330.5359.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=305bp
MNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQS
KTPSLVFEYINNTDFKVLYPTLTDYDIRYYIYELLKALDYSHSNGIMHRD
VKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDL
QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKILGTDELFN
YLDKYDLELDPHFDGIMGRHSNRPWQKFVNQENQHLVSEEAISFVGQLLR
YDHQERLTAKDAMEHPYFAEVRANQGKPLAAHQEASNQSRVAAQQVQASM
TSGV*
back to top

mRNA from alignment at H-elongata_contig19330:599..7091+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19330.5359.1 ID=mRNA_H-elongata_contig19330.5359.1|Name=mRNA_H-elongata_contig19330.5359.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6493bp|location=Sequence derived from alignment at H-elongata_contig19330:599..7091+ (Himanthalia elongata Himel1 dioecious)
AAGAGTGTACGCGGACGTGAACGTCCTCCGCCCTCGAGAGTACTGGGACT
ACGAGAGCCTCGTGGTGAATTGGGGAGACCAAGAGGACTACGAGGTGGTC
CGCAAGATCGGACGGGGCAAGTATAGCGAGGTGTTCGAAGGGATGAACGT
TCTCAACAACACCAAGTGTGTGATCAAGATACTCAAGCCGGTCAAGAAAA
AGAAGATCAAGAGGTATATGTTAATCGCGTGTTTATATGTTTTATATTAG
TGTGTTAGTGTTTATACTAATAATAGTGTTTTGAGTTAGAGTGTTCGTGT
TAGTGTTAGTGTTCGTATTAATATGTTAGTGTTTGTATTAGTCTTTTAGT
TTAGTGTTTATATTAGTGTGAGTGTGCTTATATTAGTGTGTTAGTGTGTA
TTTAGTAATATGCACTCAACCGCGTAATCCGACGCTCTGTCATGCTAGCC
ATTTTAGGCTACTCTCACATTGATCCTCACAATGAGGGATGTGTGTGTGT
GTATTTTTTAAATTGCGATCACCGTACATGTTCACTGTACCAATAGTGGG
TGTGGGAAAAGAGAGGCGTACGTGACGGTAGACTCTCGGTTGTAAACGCC
ATCGGTACGCAATTGCGTGACCTGATGGATTTGGGATTGGCCCGATGGCG
GTTGACGGTAGATATGGATGCCGTCGAGGAAAACGAGATGATCGAGAGTA
TCCCGGGAGTACGCACCAGATTCAGCCTGGGTTGAGAGAATTGAGCAGGC
TGATGCGGGACGGAACTGCCGAACCCGTCTCACGAGACCAAATTCTCAGG
CGGGACCAGGGACAGGGGGAAACATTATTTTCCCTGTTCAGCTGACCACA
AGCAGGAGGCAACCAAAACCCGTTATCCTTACACACAAACATAGAACTAC
GAGCATGTGTGTGATCATCACATATAGCAGAGGAAGATTAACCGTATTTG
GTTGCCTTCTGCTCGTGGTCAGCTGAACAGGGAGAATAATTTTTGGTCTC
GTGTGACGGGTTCGGCAGTTCCGTCCCGCATCAGCCTGCTCAATTCTATC
AACTCAGGCTGAATCTGGTGCGTACTCCCGGGATACTCTCGATCCTCTCG
TTTTCCTCGACGGCGTCCATCTCTGCCGTCAAACCACCATCGGGCCAATC
CTGAGTTTATCAGGTCACGTAATTGCGTACCAATAGCGTTTATCCCCTAG
AGTTCGCCGACACTGAGCCAATAGCTGTTAAGGTAGTTTGAGTAACGGGT
TCAGCCTATTGAGGTAACCCCATGGACCAGTTATTGTACGCCTCTCTTTT
CCCACACCCACTTGAGGTAGAGTGGGCATGTGCTATATACAGTAACAAAC
AACATCGGAGGCTGTATGTGCGTGTGTGATTTCTCTGCGGGACTCTATGG
TGAGAAGGCTGAAACTACACTGGCACAGTTCGAAGACGCGGGAAAGACGA
AAGCTATTACATATAGTGATGAAAATATTAATACTGCAGTATTATTTTAT
TATTAACATTTTCTTTTAAATGACTCCTGGTATTATTCTTATTATTATTG
TTGAGTAATATCCTTTTTTATCATTATTGTTATTATTCTTATATTATTGT
TAGTCTACTGTTTTCCGTTTTTTGTTGTTTTTGTTTGCTTTTCAACTGCA
GTCTGTCACATTTCCAGTGGCTTAAAACATGGCTAGAAGCGTCGGGCGTA
AGGCCCAAGACGTGCGAAAGTAAAGGACATGCTCATAATCTTCGAATATT
CACCGATATAATCTTTCTTTTAAGTTTAAGCGGCGATTATAACGACGGGG
ATAAAATAGAAACGTTCGTGCAACGGGGAGACCGGTGACGCACCCCCTTG
TTGAGCCGAGGTCTGTTGTCCACACGGGCGAGCGAAACCCTCGGCGAAAA
ATGCTCTGAAAATCCTCCCGTTACAAGTATTACATCTCTCTCCCGTCATA
GTTCAACGGTGAAAACATCCCAAACATTACTATACCACCCCCCCCACGTC
CGCAACCCTCCCACCCGAATTCCGCCCGCCTTAGGGAGATCAAGATCCTG
CAAAATTTGTGCGGGGGTACAAATATCATTCAGCTCCTGGACGTTGTGCG
TGATCCCCAGAGCAAGACGCCTAGCCTGGTGTTCGAATACATCAACAACA
CGGACTTCAAGGTTCTGTACCCGACTCTCACCGACTATGACATAAGGTAA
GGTAATAGACGGTACATTAAGAGCGGAATTTAAGATTAAATTAAATCCAT
CGCGACGACGCGGTTTCGAAACGGCGTCGACGGAGGCGTTATCTTCGAGA
ACAGGCAGAAATGCGACGGGGTGATCATGAGATGTATGTCCGTAAACATG
CTACATAAAGAAGAAAACGAGTTGGGACTTTTGTCTTGTGTTTTTGGTTC
GAACCTTTCATCTAGTTTTTTTCACCCGCCGACATTTGATAGTGTGTGAG
TGCGGTGCTTAGGCGTTCGCGCAGATGTCAAGGTCCCTTGGCATTACTTG
GGGGCGTATAGTATATATATATATATATATATATATAGTACGACGTATTA
CGATAACGATAACGCCTGCTGAATAGTATACAAAATTTTGTTACTGATTA
CATAAATTTATTACCCAGGTTTGGTCAGTGAACGCGAGCGTGGTGACGAA
TAAAAGCTAGTATTATTCATTGTGAAACGCATCCTGACTGTCGAAAACCT
GTCTTATATCTTATCACCTCCGTCCCGGCATTGCTACGAGTATTGCTGAT
AGGGAGAAGTGGTATACTATTCATTAATATACAACATACATTTAACATGA
ACTGCAACCCCCCACACTCCGTCCTCTCTCCCAAGGACTCCTGGTGAAAC
GATCTAACAGCTAAGACATGAAAAAGTTGAGTACGCTCCCCCCTCTGCCC
CCACCCAGACAATACGGGGTAGACCCGAAATTTTGTTCCAATACTAAGAG
AGAGAGAGAGAGAGAGATGGCCTATATACGAGCGATCGAGAATCTCGGAA
TGTATACTGTGGTGGGGGCGGATGGTGGTGGTCGTCGTCGTCGTGCCGTT
CAAGATAGCGTCTCTGTTTTCTTGTGGAGTAAATTTCCATCACCTTCGGG
CCTTCGCCAAGTCCTAGAGTGTAACCTTTGATTTCACCGCGACCAATCGC
TCTCTCGCTCTCGCGTATCGTATCGTATCGTATCGTATCGTATCGAATTT
TACCTTTCCGTCAGGTATTACATCTATGAGCTGCTCAAGGCGCTCGATTA
CTCCCACTCAAATGGTATCATGCACCGGGACGTGAAGCCTCACAACGTTA
TGATCGATCACGAGCAGAAGCAGCTGCGGCTGATCGACTGGGGTCTGGCG
GAGTTTTACCACCCGGGTAGGGAATACAACGTGAGGGTGGCTTCGCGCTA
CTTCAAGGTGAGATGACCGACCGCACTGTGTACTATATATATTGTGTTTC
CATTTTATTTTCGTATATTTATAATCGATCGATGTTTCAGTACGTTAATC
GCGCAAAAGATTCAAAGAAATCTGTCATTCGTGTCCCATCTCTCTCAAGA
AAGAAAAGAGGGGTGGAGAAAGTAGGGTATAGCTGTTCTTGTATAGTCTG
TAGTCTGATTTATTCGGCACTCAAACAGATAGCTGTAGATTGCCGTTGCC
TTCCGTTGTGTTTGCAGGTAATGGAATCATTATAGTTATCCCGCTGGGCA
TCTCGATGGCCACAAGGCGCCAAATCGGCGTCTTGCGAAAGGGTCTTAGG
GGAGACACTATCCCCCCCCCCCACCCTGGCGTTTGCGGCCGTGTTGTCGA
TATTTTTCTTAGCGTGGCAGGCGGTAAAAAAAACACTTGCACTTTTTTAG
TTTATGTAGTGTGTGTACGTGTGAGATCCTCTTTTTATTTTTTACCCCTC
TTATCCCCGCACAACCAAACCGAAACCGGAAACCGAGAAATCATTGCAAA
ACGAAACGAGAATGAAAAAAAAACGAGGCTCTTGGTTGTTTTTTGCCAGG
GGCCGGAGCTATTGGTGGACCTACAGGAGTACGACTACTCGCTGGACATG
TGGTCGCTCGGTTGTATGTTCGCGGGGATGATATTCCGAAAGGAGCCGTT
CTTCCACGGACACGATAACTACGACCAGCTCGTAAAAATCGCAAAGGTGA
GCGCCGTGGAGAATTTTATTTTACTTTGTTATGTTTTTATGTTAGTAGTA
GTAGTAGGAGGAGTAGTATGATTATATATTAATATTATTATTTATTATCA
TTACTAGTATTGTAGTAGTATCATTAGTACTATTAGTAGTAGTAATATCA
TTTATGATTAGTAGTAGTAGTAGTAGTAGTAGTAGTAAAAGTATTTTTGT
AGTATTTTTGTGAATTTTACGCCTCGTAGCGGTGAGCGCAGAAAGATGTC
TAGTTTTTTTCTTACTAGTTGTAATTATCCTTGAGACATCGAGGCGGCGG
TCGGTTTGCGCGGAGATGCTGGACGGCGGTCAGCGTCCCCGCTGACTCAA
GTTCGATGATCAATCCCCTCATCCTTGAGAAAAAAAAACTCGTGGATAAC
ATTTTCCGGTTGCCATTAAAATCCAAACGAGCATTGTCAGCAGAGGGGCA
ACACCTACAAAAAATCTCTTTTTCTAAAAAAACATATGAACTCAATTTAA
ACTCTTTGAACGTCCACACAACCACACTATATCTTATATACTTTATTACA
CCACGAGTGGTGAGAGTCAATCAAGGGGAGGGACTATGACCATCTATCTT
CTGGTTCGAGTTTGCATATGTTTTACTTATGAGTAATTAAAAAATGCCGG
TATGGATAGTTGACATTACTGTTACTGTAGTGTTTCAATATGTACTGTTA
CTCGTACATCAGCTCGCTGCTCTTGCGACCACCATGCGATGCGGTTCGAT
TCGATTCGATTTGAATTGGAACATCCGTGTCGGGCACCCATTCAGATTCT
GGGCACCGACGAGCTCTTCAACTACCTAGACAAGTACGACCTGGAGCTCG
ACCCCCACTTTGATGGCATCATGGGGCGGCACAGCAACCGGCCCTGGCAA
AAATTCGTCAACCAGGAGAACCAGCACCTGGTGTCCGAGGAGGCGATCAG
CTTTGTAGGACAGGTACCGCCCGAATCGCGAAACTGCGGTGGATTTCGCA
GTTTTTTCGCTAAAAAAAACAGGTTCATAGAGTCATATAAAAAAACGAGA
GAAGGGGGATGTACTTATGTAAAAGCGTTTATGTTAAACACATGTCGTGT
CCTAACGGACTTAGATAACGCCTCATCATCATTGCATTATCATGCCAACG
GTGCCGGGAATCGGGATATATATGCCATTTTTGCCCGTTTGGAGGTATAT
AGGTACCGGGCAACAACGCGCCACCTGCGTTTGGCTTTTTGGTTGTGAGC
GTTTCTGTATGTGTAGGTAAATAATTGTATAATTACCTTTTCCTTCTTGG
CGTTTCCGAGGAACTCAACTCATTACCCATCCTCTCCCCATTTTCCTTTC
TTTTTTTTTTTATAAATCCGGTACAGCTCCTGCGGTACGATCACCAAGAG
CGGCTCACGGCGAAAGATGCGATGGAGCACCCGTACTTCGCGGAAGTGCG
CGCGAACCAGGGGAAGCCCCTCGCGGCGCATCAGGAGGCGTCCAACCAGA
GCCGCGTTGCCGCACAACAGGTGCAAGCAAGCATGACCTCCGGCGTATGA
TGCGCGATGGCGAGACCTGATAGTTTACCTTTGCGGAGCCTAGCGGAGCA
GCGCGCCTCGCATGGCCCTGAGGGTCGTCGTACTTGGGAGGAAACGCCCG
CCGCGAGGGGGGAGGCGGGGGAGGGGGGCTTCTGCGAGGGGTGTTTTTCT
TTCGGGGTTTCGCTTTCTTGGCGGCGCTTGCTGAGGCTCGCCGGAGACAA
TAAAAGAGGTGAAAGGTGCCCTCCGGGCAGGTAGGCGGACGACGACCGAC
CTCTTCAAATGCTTAGATCCAAGGCACCATAGGCCCTTCTCGAATGCTCC
GCCCGCCACTATCACTTATCGCCTTGATTTTTTTGTTTCCACGGAAATCT
TTCCCTCCATTTCCAACTTCCAAACGTTATGGTTCACAAGCGCCACCGGG
AAACATATTTGTCGCTGTTTGCCTGTACCGATGTTGGAATCGGTCTCATG
GAGTCCACCCCGTCACGAAACATTGGGTGCTGGATATAGCACGGGGTGGA
TGGGTCGGGGGGGGGTTCACGGAAGGGAGGAATTTTGCTACACGACGTAT
GCGTTAAATTGGCGTGTTTTGCTACTATGTACGGGAGGAGGGTGGATGTT
ATATTTATAATTTCCTACCTTTACTTTTTCGAGGAGAGGGCGACGGGGTG
GGGAGGGGAGGGTGCAGTAAGAACCAAAAAAGGGATACAGTCTGTTTAGT
GTTGGCGCTTTACAGTCGTCGGTGTCCTTTTATGACCTCGTCGGGGAACC
CTCGCTTGCCGAGAGATGAGGGACCGAAATGAGATGCGGAGGC
back to top

Coding sequence (CDS) from alignment at H-elongata_contig19330:599..7091+

>mRNA_H-elongata_contig19330.5359.1 ID=mRNA_H-elongata_contig19330.5359.1|Name=mRNA_H-elongata_contig19330.5359.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at H-elongata_contig19330:599..7091+ (Himanthalia elongata Himel1 dioecious)
ATGAACGTTCTCAACAACACCAAGTGTGTGATCAAGATACTCAAGCCGGT
CAAGAAAAAGAAGATCAAGAGATGAACGTTCTCAACAACACCAAGTGTGT
GATCAAGATACTCAAGCCGGTCAAGAAAAAGAAGATCAAGAGGGAGATCA
AGATCCTGCAAAATTTGTGCGGGGGTACAAATATCATTCAGCTCCTGGAC
GTTGTGCGTGATCCCCAGAGCAAGACGCCTAGCCTGGTGTTCGAATACAT
CAACAACACGGACTTCAAGGTTCTGTACCCGACTCTCACCGACTATGACA
TAAGGGAGATCAAGATCCTGCAAAATTTGTGCGGGGGTACAAATATCATT
CAGCTCCTGGACGTTGTGCGTGATCCCCAGAGCAAGACGCCTAGCCTGGT
GTTCGAATACATCAACAACACGGACTTCAAGGTTCTGTACCCGACTCTCA
CCGACTATGACATAAGGTATTACATCTATGAGCTGCTCAAGGCGCTCGAT
TACTCCCACTCAAATGGTATCATGCACCGGGACGTGAAGCCTCACAACGT
TATGATCGATCACGAGCAGAAGCAGCTGCGGCTGATCGACTGGGGTCTGG
CGGAGTTTTACCACCCGGGTAGGGAATACAACGTGAGGGTGGCTTCGCGC
TACTTCAAGGTATTACATCTATGAGCTGCTCAAGGCGCTCGATTACTCCC
ACTCAAATGGTATCATGCACCGGGACGTGAAGCCTCACAACGTTATGATC
GATCACGAGCAGAAGCAGCTGCGGCTGATCGACTGGGGTCTGGCGGAGTT
TTACCACCCGGGTAGGGAATACAACGTGAGGGTGGCTTCGCGCTACTTCA
AGGGGCCGGAGCTATTGGTGGACCTACAGGAGTACGACTACTCGCTGGAC
ATGTGGTCGCTCGGTTGTATGTTCGCGGGGATGATATTCCGAAAGGAGCC
GTTCTTCCACGGACACGATAACTACGACCAGCTCGTAAAAATCGCAAAGG
GGCCGGAGCTATTGGTGGACCTACAGGAGTACGACTACTCGCTGGACATG
TGGTCGCTCGGTTGTATGTTCGCGGGGATGATATTCCGAAAGGAGCCGTT
CTTCCACGGACACGATAACTACGACCAGCTCGTAAAAATCGCAAAGATTC
TGGGCACCGACGAGCTCTTCAACTACCTAGACAAGTACGACCTGGAGCTC
GACCCCCACTTTGATGGCATCATGGGGCGGCACAGCAACCGGCCCTGGCA
AAAATTCGTCAACCAGGAGAACCAGCACCTGGTGTCCGAGGAGGCGATCA
GCTTTGTAGGACAGATTCTGGGCACCGACGAGCTCTTCAACTACCTAGAC
AAGTACGACCTGGAGCTCGACCCCCACTTTGATGGCATCATGGGGCGGCA
CAGCAACCGGCCCTGGCAAAAATTCGTCAACCAGGAGAACCAGCACCTGG
TGTCCGAGGAGGCGATCAGCTTTGTAGGACAGCTCCTGCGGTACGATCAC
CAAGAGCGGCTCACGGCGAAAGATGCGATGGAGCACCCGTACTTCGCGGA
AGTGCGCGCGAACCAGGGGAAGCCCCTCGCGGCGCATCAGGAGGCGTCCA
ACCAGAGCCGCGTTGCCGCACAACAGGTGCAAGCAAGCATGACCTCCGGC
GTATGACTCCTGCGGTACGATCACCAAGAGCGGCTCACGGCGAAAGATGC
GATGGAGCACCCGTACTTCGCGGAAGTGCGCGCGAACCAGGGGAAGCCCC
TCGCGGCGCATCAGGAGGCGTCCAACCAGAGCCGCGTTGCCGCACAACAG
GTGCAAGCAAGCATGACCTCCGGCGTATGA
back to top