mRNA_H-elongata_contig19303.5345.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19303.5345.1
Unique NamemRNA_H-elongata_contig19303.5345.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A6H5KWA6_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWA6_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.970e-87
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 1 
Query:  130 VYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELREPAFIGPEDLLSEA 633
            +YAQDLLVVVVVMTYA VAPVV++PALMFF + Q+VYRHQLLYVYVP FESGGSFF K+FRRW+FALFTAQATM+GMCLLKQ + QAYSVMFLMVLTYV+KRKVRSTYEPVSFSLPLEIARGLDLDRAESG EGQEEDE+L PAA+EYLQPELREPAF+GPEDL  EA
Sbjct:    1 MYAQDLLVVVVVMTYACVAPVVIVPALMFFFLAQVVYRHQLLYVYVPTFESGGSFFPKMFRRWIFALFTAQATMVGMCLLKQGFKQAYSVMFLMVLTYVYKRKVRSTYEPVSFSLPLEIARGLDLDRAESGQEGQEEDEALHPAADEYLQPELREPAFVGPEDLFVEA 168
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A836CHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.200e-47
Identity = 106/194 (54.64%), Postives = 136/194 (70.10%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDR-AESGPEGQEE--------------DESLDPAANEYLQPELREPAFIGPEDLLSEAAAS 642
            PG F+YGQ +AQDLLV+ ++MTYA +APV+L+P L+FF + Q+VYRHQLLYVYVP FESGG+FF  VFRR+VFAL TAQATM+GM LLK    Q Y++  LMV+TYV+K K+R+ YEPV+ +LPLEIA  LDLDR A++   G                 D +     NEYLQPEL+EP+F+ P+  L   + S
Sbjct:  777 PGSFYYGQTFAQDLLVLTLIMTYACIAPVILVPGLLFFGIAQVVYRHQLLYVYVPDFESGGAFFPLVFRRFVFALVTAQATMLGMFLLKNGLAQVYAMAILMVVTYVYKGKMRALYEPVAETLPLEIATALDLDRQAKAAATGAAHXXXXXXXXXXXXRPDGARTAEGNEYLQPELKEPSFLQPDPALERVSPS 970
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: D7FQJ6_ECTSI (Early-responsive to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.080e-45
Identity = 102/159 (64.15%), Postives = 119/159 (74.84%), Query Frame = 1 
Query:   49 SGESSSAVGQRRSSRKPPYPGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAESGP 525
            SG SS       S+R P +PG F+YGQ+YAQDLLVVV VMTYA VAPVV+IPALMFF + Q+VYRHQLLYVYVP FESGGSFF K+FRRW+FALF AQATM+GMCLLKQ + QAYSVMFLMVLTYV+K          SF  PL  + G+ ++   + P
Sbjct:  976 SGASSPVNSGSSSNRIPMHPGGFYYGQMYAQDLLVVVXVMTYACVAPVVIIPALMFFFLAQVVYRHQLLYVYVPTFESGGSFFPKMFRRWIFALFAAQATMVGMCLLKQGFKQAYSVMFLMVLTYVYK----------SFPSPLGSSGGVGVEGRRTRP 1124
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A7S2UV71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV71_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.380e-42
Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELREPAFIGPE 615
            PG F YG++ AQDLLVVV+VMTYAN+AP +LIP +MFF + Q+V R+QLLY+YVP FE+GG  F  +FRR +F+LF AQAT++G+ LLK AY Q Y    L  +TY FK K+R  +EP+S SLPLE+ + LD   A      +EE+++    A +++QP L  PAF  P+
Sbjct:   39 PGWFPYGKMVAQDLLVVVIVMTYANMAPFILIPGMMFFAVTQLVMRYQLLYIYVPTFETGGQMFEMIFRRIIFSLFLAQATLLGLFLLKGAYEQVYCTFPLFFVTYYFKSKMRVMWEPISLSLPLELTQYLDRQAAT-----EEEEDNRKMEAEKFIQPALAAPAFATPD 203
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.750e-34
Identity = 84/170 (49.41%), Postives = 116/170 (68.24%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELREPAFIGPE 615
            PG F Y +  AQDLLVVVV  T+A + P +L+ ++ ++L   + Y+HQ+LYVY P +E+GG+FF KVFRR++FA+FTAQATM G+ +LK AY QA +V+ LMV T+ FK + R  +EPVS +LPLE+A  LD++      E   E   LD  +N Y+QPEL   A + PE
Sbjct:  614 PGWFNYPKYLAQDLLVVVVTFTFACINPFILVVSIPYYLAAHLTYKHQMLYVYEPVYETGGTFFPKVFRRFIFAIFTAQATMAGVLILKTAYYQAAAVVLLMVATWAFKSQQRGYFEPVSNALPLEVATVLDMES-----EVPREGPLLDEMSNPYMQPELTAKAVVQPE 778
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A6H5JKU1_9PHAE (ERD protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKU1_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.220e-32
Identity = 85/183 (46.45%), Postives = 113/183 (61.75%), Query Frame = 1 
Query:  109 GCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELREPAFIGPE-DLLSEAAASDETF 654
            G F Y +  AQDLLVVV+ +TY+ V P +L+  + +F    +VY+HQ+L+VY P +E+GG FF K+FRR++FAL  AQATM+G+ +LK AY QA  V  LM+LTY+ K  +R +YEP + SLPLEIA+ LD       P    ED     A   YLQP L+   F  PE D   +A    E F
Sbjct:  774 GWFNYPKYIAQDLLVVVICLTYSIVNPFILVVGIPYFFACHLVYKHQMLFVYEPMYETGGVFFPKIFRRFIFALIIAQATMVGILILKVAYYQAGLVFVLMILTYIAKSSLRGSYEPAALSLPLEIAKVLDDVEPARRPARDHEDGDDGDARTAYLQPSLKAEPFARPELDRDHQANIDFERF 956
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: K0RUA1_THAOC (RSN1_7TM domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUA1_THAOC)

HSP 1 Score: 131 bits (330), Expect = 7.180e-30
Identity = 76/185 (41.08%), Postives = 114/185 (61.62%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDLDRAE-SGPEGQEEDESLDPAANEYLQPELREPAFIGPEDLLSEAAASDETFG 657
            PG F Y ++ AQD+LVVV+ + +A VAP+VLIP  +FF + +IV+ HQ LYVY   FE+GG F+ K+FRR+VF LF +QAT+ G  +LK A ++AY+ + LM+LTY F R  R+ Y+  S  LPLE+A  +D+   +    + Q   E +    N    P     + +G + + S A+  +E+ G
Sbjct:   57 PGWFNYHKILAQDMLVVVISVVFAVVAPIVLIPCAVFFFLSRIVWTHQFLYVYESAFETGGLFWPKIFRRFVFGLFISQATITGQFILKDARHEAYATIVLMILTYAFLRSTRARYDATSNCLPLEVATVMDISVGQYEEMKKQRRHEGMKKQQNPGASP-----SEVGTDSVSSNASEDEESLG 236
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: F0Y5Y8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5Y8_AURAN)

HSP 1 Score: 135 bits (339), Expect = 3.970e-29
Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTY---EPVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELR 591
            PG F YG+  AQDLLVVV++MTY  ++P++L+P L+FF    +VYRHQLLYVY P FESGG  + +++RR +F++F  Q TM+G+  LK A++Q Y V+ L VLTY++K ++RS Y     V+  LP+E+A  +D   +E      + +  LD   + YLQP LR
Sbjct:  992 PGWFSYGKYGAQDLLVVVLLMTYCVMSPIILVPGLLFFGWASVVYRHQLLYVYEPIFESGGLLWPRIYRRTLFSIFIMQLTMVGLFFLKHAFSQGYCVLALSVLTYLYKMQMRSMYTTSSSVAHHLPMELATAVDEQISEDAEA--DANAMLDAGLHGYLQPSLR 1154
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A7S3NIB5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIB5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.750e-27
Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYE---PVSFSLPLEIARGLDLDRAESGPEGQEEDESLDPAANE---------YLQPEL 588
            PG F YG+  AQDLLVV ++MTYA +AP++L+P L+FF++ Q+VYRHQLL+VY+P FESGG  + +++RR +F+LF  Q TM G+  LK  Y Q Y+ + L V TY+FK + R  +     V+  LP+E+A  +D     +  E        DP AN+         YLQP L
Sbjct:  708 PGFFSYGKFAAQDLLVVALLMTYAVMAPIILLPGLLFFILAQLVYRHQLLFVYLPIFESGGLLWPRIYRRTLFSLFILQFTMTGLFFLKAVYKQGYACLALSVATYIFKVRTRHLFANSASVAHHLPIELATAVDDAMRHTNRE--------DPIANDALLWQGLQQYLQPPL 872
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BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Match: A0A7S2S6S7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S6S7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.270e-26
Identity = 59/133 (44.36%), Postives = 94/133 (70.68%), Query Frame = 1 
Query:  106 PGCFFYGQVYAQDLLVVVVVMTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRRWVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVSFSLPLEIARGLDL 504
            PG F + ++ AQD+LVVV+ + +A VAP+VL+P  +F L  ++++ H  LYVY   FE+GG F+ K+FRR+VF L  AQ+T+ G  +LK+A ++AY+ + LM +TY+F R  R+ ++  S +LPLE+A  +D+
Sbjct:    5 PGWFAFHKILAQDMLVVVISVVFAVVAPIVLLPCALFCLFSRMLWTHHHLYVYESVFETGGQFWPKIFRRFVFGLIIAQSTITGQFILKEARHEAYATIALMCMTYIFLRSTRARFDAPSSTLPLEVATIMDI 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19303.5345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWA6_9PHAE1.970e-8785.71ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CHQ4_9STRA1.200e-4754.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FQJ6_ECTSI4.080e-4564.15Early-responsive to dehydration protein-related n=... [more]
A0A7S2UV71_9STRA1.380e-4251.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z3W6_9STRA1.750e-3449.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JKU1_9PHAE6.220e-3246.45ERD protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
K0RUA1_THAOC7.180e-3041.08RSN1_7TM domain-containing protein n=1 Tax=Thalass... [more]
F0Y5Y8_AURAN3.970e-2946.06Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NIB5_9STRA6.750e-2743.93Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2S6S7_9STRA2.270e-2644.36Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19303contigH-elongata_contig19303:1977..5876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score147.1
Seed ortholog evalue7.1e-33
Seed eggNOG ortholog2880.D7FQJ6
EggNOG free text desc.ion transport
EggNOG OGsCOG5594@1,KOG1134@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons5
Model size1960
Cds size495
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930100.1457188-UTR-H-elongata_contig19303:1976..22811622930100.1457188-UTR-H-elongata_contig19303:1976..2281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 1977..2281 -
1691679279.959366-UTR-H-elongata_contig19303:1976..22811691679279.959366-UTR-H-elongata_contig19303:1976..2281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 1977..2281 -
1622930100.161646-UTR-H-elongata_contig19303:2385..33801622930100.161646-UTR-H-elongata_contig19303:2385..3380Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 2386..3380 -
1691679279.971353-UTR-H-elongata_contig19303:2385..33801691679279.971353-UTR-H-elongata_contig19303:2385..3380Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 2386..3380 -
1622930100.2265463-UTR-H-elongata_contig19303:5043..50791622930100.2265463-UTR-H-elongata_contig19303:5043..5079Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 5044..5079 -
1691679280.0016115-UTR-H-elongata_contig19303:5043..50791691679280.0016115-UTR-H-elongata_contig19303:5043..5079Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 5044..5079 -
1622930100.2431097-UTR-H-elongata_contig19303:5747..58761622930100.2431097-UTR-H-elongata_contig19303:5747..5876Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 5748..5876 -
1691679280.0090344-UTR-H-elongata_contig19303:5747..58761691679280.0090344-UTR-H-elongata_contig19303:5747..5876Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19303 5748..5876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930100.1832454-CDS-H-elongata_contig19303:3380..36081622930100.1832454-CDS-H-elongata_contig19303:3380..3608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 3381..3608 -
1691679279.9793336-CDS-H-elongata_contig19303:3380..36081691679279.9793336-CDS-H-elongata_contig19303:3380..3608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 3381..3608 -
1622930100.1971025-CDS-H-elongata_contig19303:4104..42821622930100.1971025-CDS-H-elongata_contig19303:4104..4282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 4105..4282 -
1691679279.9871573-CDS-H-elongata_contig19303:4104..42821691679279.9871573-CDS-H-elongata_contig19303:4104..4282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 4105..4282 -
1622930100.210712-CDS-H-elongata_contig19303:4954..50431622930100.210712-CDS-H-elongata_contig19303:4954..5043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 4955..5043 -
1691679279.994217-CDS-H-elongata_contig19303:4954..50431691679279.994217-CDS-H-elongata_contig19303:4954..5043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19303 4955..5043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19303.5345.1prot_H-elongata_contig19303.5345.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19303 3381..5043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19303.5345.1

>prot_H-elongata_contig19303.5345.1 ID=prot_H-elongata_contig19303.5345.1|Name=mRNA_H-elongata_contig19303.5345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MTYANVAPVVLIPALMFFLMGQIVYRHQLLYVYVPKFESGGSFFTKVFRR
WVFALFTAQATMIGMCLLKQAYNQAYSVMFLMVLTYVFKRKVRSTYEPVS
FSLPLEIARGLDLDRAESGPEGQEEDESLDPAANEYLQPELREPAFIGPE
DLLSEAAASDETFG*
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mRNA from alignment at H-elongata_contig19303:1977..5876-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19303.5345.1 ID=mRNA_H-elongata_contig19303.5345.1|Name=mRNA_H-elongata_contig19303.5345.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3900bp|location=Sequence derived from alignment at H-elongata_contig19303:1977..5876- (Himanthalia elongata Himel1 dioecious)
ATTGGGGTGTCATCCAGGAATCGGTCGTGGGAGAACAGCGGATCGTGTTC
CGGCGAGAGTTCCTCGGCCGTGGGGCAGCGGAGAAGCTCCCGGAAACCAC
CGTACCCCGGGTGTTTCTTTTATGGCCAGGTGGGGGGTTGCCCAGCGCAG
TCGTTTTGTTTCATCACACAAGAGGAGTGATGAGGTTTTCCCATGTTCGT
GGGCGGTGTTTGCGCGGTTTGAACAACCCCCTATTTATTTGCGCGGTGGG
GGGATGGCGTAAGAGGGGCTAGAAAGGGTTAACGACGCAGGAAAGAACGG
GATAAGGCAGGGCCACCGGACCAAGAAAAGAGCACGGGTCTTACTAGCAT
CAGAGCCCCTTTTTGAACCCGACAGAGCCATGTTTATTTTGGGCGGGGGT
TGCCGTGATTGCCTTCGTTAATTGCCGACTGGCTAAGGGGGTAGTGGTCG
AAATTCACGCGGCACACAACTAATTCTTTCAAACGCAATCTTTTGTGTGT
GTGTGTGTGTATTTATTAAATTAAACATAACCGCGCAATCCGGCCCTGTC
GTCCTAGTCCTTCTATGCCACTCGTATCGATCCTCCTAGGGGGGGATCAA
TGATACTTATTCCGAAAAACTCTAATCAAACGCGACAAAGGGGGGGGTGT
CTGTGTCTGTTTCTGTGTGTGTGTGTGACATTCGATAGTTTCAAGGTTCA
TCCCATACCCGAACGCATCCCTCCCCACCCATTTCTCGCCTCGCCTTGCA
CGCACTTTTCGCTAATGTATTTTACAATAAAACAAAACAAAACAAAGGTG
TACGCGCAAGATCTCCTTGTCGTCGTGGTTGTGATGACGTACGCGAACGT
TGCTCCGGTGGTTCTCATTCCGGCCCTCATGTTCTTTCTCATGGGGCAGA
TCGTTTACAGGCATCAGCTGCTGTGAGTAGCTTTCTTCGAGCGTTGGGAG
ATATGGAGGTGGGGGGGGGATAGCGGCGTTGTTAGATGTCCGTGGTAAAG
GGTACAGGGTACGCACGCGCGTTTTTGTGCATGTGCGTGTGTTGATTTTT
CTGTCGGGTTTTATTGTTTTATTGTTTCTTGTGTTTTACGATGAAGGAGG
GGCCGCGCAAGTATTCACCGAGCAAATGATACACATTTATTAGCGTAATT
ATTTACTTCAATGTGTATTTTTTCTGCTCATTTGTGCTACATCGCTGTGC
GCAACGCCCACTCCATTCCAGCACCCATGACACCTACAGTACTAATGAAG
TGATAAACGCATAATACAGTACTCTAATATGGTAATAATGCAGTAATAAT
GTAATGCTAATGCAGTAATAATTCTAATGTAGTAATAATGCAATACTAAT
GCAGTAATAATTCTACCTCAGTATTTCTTAGTGCCGTTTGTAAACCCGCG
AGACTTGCAGGACGCCCGCCCGCCCGCCTCCTTCCCCCCCCCCCTCTCCC
CCCAGGTACATCGTTTCCCCTTCCGGCACGAACAGGCAGAGAACCACGAA
TGCCACGTGCCCTGGGATTTCCTTTCCCCATCCTTCCCTCCCCTCATCGT
CACGCCAACCCGCTGCGCCTCGTCGTTCGCTCTCCTGCTGACAGCTACGT
GTACGTCCCGAAGTTCGAGAGCGGAGGGAGCTTTTTCACGAAGGTTTTTC
GACGATGGGTGTTTGCCCTATTCACGGCACAGGCAACAATGATCGGGATG
TGTCTCCTAAAGCAGGCGTACAATCAGGCATACAGCGTGATGTTCCTGAT
GGTGCTCACGTACGTTTTTAAGGTGAGTTGGATGGGGGAGGGGGGGGAGG
GAGTGAGTCCTTCCGATGGAATTAAGCAATAAAAGTAGCTTCGGTGGCGA
GTTGGATGTTATTCTTCTTATTCGGGAAACGTTAGTTTTTATCTCGTTTG
TTTCTTCGAGAAATGGGCAAGGAAAGGGAAAGGGGCAGCCCCCCCCCGCC
AATCCCCCGAAAAAAAACTTCGGTACACTTGAATATGTGTAGGAATGTTG
TCCCATTGCACCCGCCGAGCAACGAAAAGCAGTCGATTTGAGACCGTTAA
CTTGATCAATTGACGCGTAGGTATATATGTACTGGTATATATTTAAAATA
TACTTCGCATATGTATGTAGAGATGTAGAAATGTTTGGTGACGAGAAGAA
GGAAAAATCTGGCGGTGCAAACCCTCAAGACTGAGAAAGCGTTTTTTTCA
CCCCGCCCCACCACTCGCTGCCGCCTCCTGCGCTTGAAACCCCATGTTCT
CCACCGCTACACTCCCAGCGCAAGGTACGCTCGACGTACGAGCCCGTATC
CTTCTCTCTTCCCCTCGAGATCGCCAGGGGTCTTGACCTCGACCGAGCCG
AAAGCGGGCCGGAGGGACAGGAAGAGGACGAGAGCCTCGATCCCGCTGCC
AACGAGTACCTCCAGCCGGAGCTAAGGGAGCCGGCCTTCATCGGTCCGGA
AGATCTGCTCAGTGAAGCGGCGGCCTCGGATGAGACGTTTGGGTAGGGAT
AGTATGGTAAATAAGGTAGGAGGTGGCGCATGGTGGGGAGGAGAGCAAGT
CCATGATGGAAGCCCATGATGGCAGTCCATGATGTGGTGCGTTCAGGAAT
ATGATAATTTTGGGCGTAGGAGCAGGAGGAGGAGATTGCGCTGCGTCGGT
AGTTGGGTCGATCCGCCGTTTCAACATGATGTCTGGCGTCGCTGCGTAGT
CTCTTTCTCTGTGTGTCCCCTCTGTCGTTGTCGTTTTCGTTGTAGTTTCA
TCCTTGTGATGTGTGTTTATTAATAGTATTTTTCTTGGGTCTCGGGACTG
TCGGGGGAGGGTACCTCCTATTTCGATGAGACATCTGGAAATCTTGCCGG
GACTGTCGACGAAGCGTGCGGCAAAGGATGTCGAGGTCTCCTCCTGGGCA
CTTCCAATACTAGAGCGTATTTTTTGCATGTAGCGTCTCTTTTTCTTTTT
CTCATGAGCGTCCCGTGCGAATTTCGTGAGGATCGTGATCTATGTGGGGA
GGAAAGGCGGGGGAAAAATAAAACAAAGAACCGCAGGGTCTGCTTTGGAG
GCAACCAGTCGCTCTCCATGAAGATTTCCCCCGATTTTCCCGTTACACAG
TTAAATGTATCGCTTTTCGCTGAATGCTACATGTTTTTTAGACTCAATGC
AATATATTGTTAATTGCCAGGGGCGTTTTGGATGGTTTTGGTGGAGTTAT
CGGTAGCGTTCGCCTCATCAAACGTTAGTCGTTTAGACAGTAGAGGTTTT
GGTATGAATATGGTGCTGCCGCCGCTGCCGCTGTCGCCGGCTGTCGCGAT
GGATCTATCGTTCGTTTGTAGAACAGATTCAGCAGCCCGATGTGCGTCTC
AAGCAAGGAAGATCAAGTGTGCACCCGTGTTCGCACGGAAATGTCATTTT
ACCCACAAAGGAGGGTGCTTAGTGTTTGAATACATGTATCGGTATATGTG
TAAACGTGCCGAATAACGACTTCATCCACCGCTGGCGGGATTTGGGGGGG
GGGCGGGGGGTTACTGGGAGGTGTGTATGGAGTTCTTAGTTCAGAGAGTT
ATTGTCGATGTAGAACACAAGCCAAGGTTGGACAGGCCTTTGCCTAGTAC
CTACTTCCCATTATTATTTCTCGCGACGCATGATTATCTGATTATTTGCA
TTACTGCATTATTACTGCTCCTTGCCGATGCATGTAAAAGCTGTACCCGA
ACACACAAGTACTTGTACGATGCACAGCTACTACGTTCACTGCGGTAGGA
TCAGGCTTTTGTGTGTCTAGAGCTATATATATATATATATATATATAAAC
CGTTTTGTATATACCGTAGTGTCTAATTGTTTCTTTTGAGGGGGAGAGAG
AGAGGGGGGGGACATTGCGCTGAGGGGGGCGCGCGCACGTGTCAACGTTT
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Coding sequence (CDS) from alignment at H-elongata_contig19303:1977..5876-

>mRNA_H-elongata_contig19303.5345.1 ID=mRNA_H-elongata_contig19303.5345.1|Name=mRNA_H-elongata_contig19303.5345.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=990bp|location=Sequence derived from alignment at H-elongata_contig19303:1977..5876- (Himanthalia elongata Himel1 dioecious)
ATGACGTACGCGAACGTTGCTCCGGTGGTTCTCATTCCGGCCCTCATGTT
CTTTCTCATGGGGCAGATCGTTTACAGGCATCAGCTGCTATGACGTACGC
GAACGTTGCTCCGGTGGTTCTCATTCCGGCCCTCATGTTCTTTCTCATGG
GGCAGATCGTTTACAGGCATCAGCTGCTCTACGTGTACGTCCCGAAGTTC
GAGAGCGGAGGGAGCTTTTTCACGAAGGTTTTTCGACGATGGGTGTTTGC
CCTATTCACGGCACAGGCAACAATGATCGGGATGTGTCTCCTAAAGCAGG
CGTACAATCAGGCATACAGCGTGATGTTCCTGATGGTGCTCACGTACGTT
TTTAAGCTACGTGTACGTCCCGAAGTTCGAGAGCGGAGGGAGCTTTTTCA
CGAAGGTTTTTCGACGATGGGTGTTTGCCCTATTCACGGCACAGGCAACA
ATGATCGGGATGTGTCTCCTAAAGCAGGCGTACAATCAGGCATACAGCGT
GATGTTCCTGATGGTGCTCACGTACGTTTTTAAGCGCAAGGTACGCTCGA
CGTACGAGCCCGTATCCTTCTCTCTTCCCCTCGAGATCGCCAGGGGTCTT
GACCTCGACCGAGCCGAAAGCGGGCCGGAGGGACAGGAAGAGGACGAGAG
CCTCGATCCCGCTGCCAACGAGTACCTCCAGCCGGAGCTAAGGGAGCCGG
CCTTCATCGGTCCGGAAGATCTGCTCAGTGAAGCGGCGGCCTCGGATGAG
ACGTTTGGGTAGCGCAAGGTACGCTCGACGTACGAGCCCGTATCCTTCTC
TCTTCCCCTCGAGATCGCCAGGGGTCTTGACCTCGACCGAGCCGAAAGCG
GGCCGGAGGGACAGGAAGAGGACGAGAGCCTCGATCCCGCTGCCAACGAG
TACCTCCAGCCGGAGCTAAGGGAGCCGGCCTTCATCGGTCCGGAAGATCT
GCTCAGTGAAGCGGCGGCCTCGGATGAGACGTTTGGGTAG
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