mRNA_H-elongata_contig1930.5343.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A6H5KFX0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX0_9PHAE) HSP 1 Score: 136 bits (342), Expect = 3.940e-39 Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 4 AVYVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQV 249
AVYVD V GAVCCRIEPS+ PGGHD LYIMTLGVLATWRRR IG+ LLRRVL +L HPSV+EVYLHVQT+N+EAV FY+V
Sbjct: 32 AVYVDNVAVGAVCCRIEPSKSPGGHDSLYIMTLGVLATWRRRNIGTHLLRRVLESLPRHPSVKEVYLHVQTNNDEAVGFYKV 113
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: D8LRT1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT1_ECTSI) HSP 1 Score: 132 bits (333), Expect = 4.690e-37 Identity = 62/81 (76.54%), Postives = 69/81 (85.19%), Query Frame = 1
Query: 7 VYVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQV 249
VYVD V GAVCCRIEP + PGGHD LYIMTLGVLATWRRR IG+ LLRRVL +L HPSV+EVYLHVQT+N+EAV FY+V
Sbjct: 88 VYVDNVAVGAVCCRIEPPKSPGGHDSLYIMTLGVLATWRRRNIGTHLLRRVLESLPRHPSVKEVYLHVQTNNDEAVGFYKV 168
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A7S2CI27_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI27_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.240e-36 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 10 YVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKLHREG 345
Y +G V G++C R+EPS PG +LYIMTLGVLA +RRR IG +LL R L LE P + E+YLHVQ SN+ A++FY GF+ E I NYYKRI+PPDC++L K L R+
Sbjct: 63 YWNGFVVGSICSRLEPSTGPG-PKKLYIMTLGVLAAYRRRSIGKKLLMRTLEALESRPDITEIYLHVQVSNDTAIQFYHSCGFETKEMIPNYYKRIEPPDCYLLSKCLVRKN 173
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A6U4V3F5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4V3F5_HEMAN) HSP 1 Score: 130 bits (328), Expect = 3.770e-36 Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 4 AVYVDGVVSGAVCCRIE-PSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKLHR 339
A Y ++ GA+CCR+E P+ G RLYIMT+GVLA +R G+G+++L + L++ E PSV E YLHVQTSN +A++FY+ GF++ TI NYYK+I+PPDCH+L K R
Sbjct: 80 AYYSTDILVGAICCRLEKPAAGGAGGTRLYIMTIGVLAPYRSCGVGTEMLEQTLSDAEKDPSVSEAYLHVQTSNTDAMEFYKRFGFEVTSTIKNYYKKIEPPDCHVLTKTFAR 192
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: K3WS71_GLOUD (N-acetyltransferase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS71_GLOUD) HSP 1 Score: 128 bits (321), Expect = 1.590e-35 Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 1
Query: 10 YVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
YV +V+GA+CCR+EP E R YIMTLGVL +R+ IGS LL+ ++ N V+ +YLHVQTSN A++FY GF+I ETI NYYKRI+PPDC+IL KKL
Sbjct: 50 YVGSIVAGAICCRLEPLETHSVFQRTYIMTLGVLEVYRQCQIGSMLLQNII-NQSIRDGVDHIYLHVQTSNSVAIQFYHKFGFEITETIRNYYKRIEPPDCYILLKKL 156
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A329SCP1_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SCP1_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.410e-35 Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 13 VDGVVSGAVCCRIEP-SEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
V G GA+CCR EP E P G +R YIMTLGVL ++RR IGS+LL V+A H SV +VYLHVQTSN A++FY+ HGF+ + + NYYKRIDPPDC++LR++L
Sbjct: 83 VRGFAVGAICCRREPVKEGPVGLERTYIMTLGVLESYRRARIGSRLLEGVIAQ-SIHDSVVQVYLHVQTSNTAALRFYRSHGFEATQILRNYYKRIDPPDCYVLRRQL 189
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A7S2USK3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.240e-34 Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 10 YVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
Y +G V GAVC R E S G +YIMTLGVLA +R R IGSQLL RVL+ E + ++ +YLHVQTSN EA+ FY+ GF+ + I NYYKRI+PPDC+IL+K+L
Sbjct: 54 YWNGFVVGAVCSRFEASS--NGRRNVYIMTLGVLAAYRGRSIGSQLLERVLSACEAYDDLDHIYLHVQTSNTEALNFYRCFGFEQTDIIRNYYKRIEPPDCYILKKRL 159
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A9S6R5_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S6R5_PHYPA) HSP 1 Score: 125 bits (313), Expect = 3.560e-34 Identity = 56/108 (51.85%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 10 YVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
Y + + G++ CR+E + G RLYIMTLG+LA +RR GIGS+LL+ L + P++EEVYLHVQ +N+EA++FY+ GF+I +TI NYYKRI+PP C++L K L
Sbjct: 53 YYNDICVGSIACRLEKKD--GSKMRLYIMTLGILAPYRRLGIGSKLLQNALELCKDDPNIEEVYLHVQINNDEAIEFYRQFGFEITDTIKNYYKRIEPPHCYVLSKSL 158
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A176VWJ3_MARPO (N-acetyltransferase domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VWJ3_MARPO) HSP 1 Score: 125 bits (313), Expect = 3.660e-34 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 4 AVYVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
A Y D V G++ CR+E E G RLYIMTLGVLA +RR GIGS+LL++ L E P + EVYLHVQT+NE A++FY+ F+I ETI NYYK I+PPDC++L K L
Sbjct: 52 AYYADLCV-GSIACRLEKKEG-GAGVRLYIMTLGVLAPYRRIGIGSKLLKKTLEQCEQDPLIVEVYLHVQTNNEAAIEFYKKFDFEITETIKNYYKHIEPPDCYVLSKNL 159
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Match: A0A225WLU1_9STRA (Acetyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLU1_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.780e-34 Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 13 VDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLRRVLANLEHHPSVEEVYLHVQTSNEEAVKFYQVHGFDIAETIANYYKRIDPPDCHILRKKL 333
V G GA+CCR EP E G +R YIMTLGVL T+RR GIG++LL V+A V +VYLHVQTSN A++FY+ HGF++ + + +YYKR++PPDC++LR++L
Sbjct: 51 VGGFAVGAICCRREPVEELEGVERTYIMTLGVLETYRRAGIGTRLLEGVIAQ-SIQDGVVQVYLHVQTSNTAALRFYRSHGFEVTQILRDYYKRLEPPDCYVLRRQL 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1930.5343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1930.5343.1 >prot_H-elongata_contig1930.5343.1 ID=prot_H-elongata_contig1930.5343.1|Name=mRNA_H-elongata_contig1930.5343.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp FAVYVDGVVSGAVCCRIEPSEPPGGHDRLYIMTLGVLATWRRRGIGSQLLback to top mRNA from alignment at H-elongata_contig1930:13678..14295- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1930.5343.1 ID=mRNA_H-elongata_contig1930.5343.1|Name=mRNA_H-elongata_contig1930.5343.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=618bp|location=Sequence derived from alignment at H-elongata_contig1930:13678..14295- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1930:13678..14295- >mRNA_H-elongata_contig1930.5343.1 ID=mRNA_H-elongata_contig1930.5343.1|Name=mRNA_H-elongata_contig1930.5343.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=696bp|location=Sequence derived from alignment at H-elongata_contig1930:13678..14295- (Himanthalia elongata Himel1 dioecious)back to top |