mRNA_H-elongata_contig19245.5324.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: D7FVC2_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC2_ECTSI) HSP 1 Score: 570 bits (1469), Expect = 5.020e-190 Identity = 304/395 (76.96%), Postives = 325/395 (82.28%), Query Frame = 1
Query: 157 MPPLVSVSPRPDSSPSLTASPSPASTGMPQVLAPAPFGSSEEAAGAGSAAGISGPSENKRLASFLS-SVTTAEDNVVPGLDNVNESEEEEDGEGLCCLVTDCGRERMSSDYFCSRHVDKGKRVSWKAAKRMVQTMSKGLYSMSTVVQGEKLGQFLDTEMPSMNKLKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPGVTNIDSLSDQVTD 1338
MPP VSVSPRP +SP+LTASPSPASTG PQ L SEN RLA+FL SV ED G D+V +EE GLCCLVTDCGR R+SSDYFCS+H+DK KRVSWKAAKRMVQTM KGLYSMSTVVQGEKLGQFLDTEMPSM+ LKPEILSERFQRQET+TLGEALFLIDQA LEIL+ EPNALELKAP+KIVGDLHGQFFDLISML+NCG+PRDG+SYLFLGDYVDRGEFSCEVLLYLLALKV HP K+HLIRGNHECRSLTTHFGFK DECK+KYGLPVYYRFLRCFELMPLCA+I N+HGRYFCTHGGISP LTSLDQIAALNRRAEPEM+GLLCDLLWADPSDDPGVTNI+SLSDQ D
Sbjct: 1 MPPPVSVSPRPATSPTLTASPSPASTGNPQTLFEDGGXXXXXXXXXXXXXXXXXASEN-RLANFLRVSVPAGEDGA--GADSVMMESDEEGQGGLCCLVTDCGRARISSDYFCSQHMDKAKRVSWKAAKRMVQTMGKGLYSMSTVVQGEKLGQFLDTEMPSMDDLKPEILSERFQRQETITLGEALFLIDQA--LEILKTEPNALELKAPIKIVGDLHGQFFDLISMLENCGTPRDGASYLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFK------------DECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALNRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELD 378
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A6H5L3W8_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W8_9PHAE) HSP 1 Score: 507 bits (1305), Expect = 2.870e-165 Identity = 249/289 (86.16%), Postives = 265/289 (91.70%), Query Frame = 1
Query: 472 MSSDYFCSRHVDKGKRVSWKAAKRMVQTMSKGLYSMSTVVQGEKLGQFLDTEMPSMNKLKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPGVTNIDSLSDQVTD 1338
MSSDYFCS+H+DK KRVSWKAAKRMVQTM KGLYSMSTVVQGEKLGQFLDTEMPSM+ LKPEILSERFQRQET+TLGEALFLIDQA LEIL+ EPNALELKAP+KIVGDLHGQFFDLISML+NCG+PRDG+SYLFLGDYVDRGEFSCEVLLYLLALKV HP K+HLIRGNHECRSLTTHFGFK DECK+KYGLPVYYRFLRCFELMPLCA+I N+HGRYFCTHGGISP LTSLDQIAAL+RRAEPEM+GLLCDLLWADPSDDPGVTNI+SLSDQ D
Sbjct: 1 MSSDYFCSQHMDKAKRVSWKAAKRMVQTMGKGLYSMSTVVQGEKLGQFLDTEMPSMDDLKPEILSERFQRQETITLGEALFLIDQA--LEILKTEPNALELKAPIKIVGDLHGQFFDLISMLENCGTPRDGASYLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFK------------DECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALDRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELD 275
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A835YV28_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV28_9STRA) HSP 1 Score: 284 bits (726), Expect = 3.270e-89 Identity = 135/231 (58.44%), Postives = 168/231 (72.73%), Query Frame = 1
Query: 628 MPSMNKLKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGS------SYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPGV 1302
+PS+ L P L+ F Q+ + GEAL+LID+A + ++ E N L L+APV++VGDLHGQFFDL+SML+ CG P +G +YLFLGDYVDRG +SCEV+LYLLALK+ HP +HL+RGNHECR+LT HFGFK +ECK KYGLPVYYRF+R FE +PL AL+ N+HGRY C HGG+SP L ++D + AL+RR EP MDG LCDLLWADPSDDP
Sbjct: 8 LPSLETLSPARLAATFSAQDQLETGEALWLIDEA--IRLISKERNVLRLEAPVRVVGDLHGQFFDLLSMLEMCGMPGEGDGEGEGGTYLFLGDYVDRGAYSCEVMLYLLALKLAHPDHVHLLRGNHECRALTGHFGFK------------EECKGKYGLPVYYRFVRVFEELPLAALVTNDHGRYLCAHGGLSPELATIDAVDALDRRTEPPMDGPLCDLLWADPSDDPST 224
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A835Z1Z6_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z6_9STRA) HSP 1 Score: 263 bits (673), Expect = 1.210e-81 Identity = 124/199 (62.31%), Postives = 153/199 (76.88%), Query Frame = 1
Query: 709 LFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGS--SYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPG 1299
++LIDQ + L EPN L L APV++VGDLHGQFFDL+SM++ CG PR+G +LFLGDYVDRG +SCEV+LYLL+LK+ +P+ +HL+RGNHECRSLT HFGFKA ECKAKYGLPVYYRFLR FE +PLCA++ ++ GRY C HGG+SP L S++++ AL RR EP M G LCDLLWADP+DDPG
Sbjct: 1 MWLIDQG--IRALAREPNVLRLDAPVRVVGDLHGQFFDLLSMVEMCGLPREGEPGGFLFLGDYVDRGAYSCEVMLYLLSLKLAYPKHVHLLRGNHECRSLTGHFGFKA------------ECKAKYGLPVYYRFLRLFEELPLCAVVTSDVGRYLCAHGGLSPDLASIEEVDALQRRGEPPMSGPLCDLLWADPADDPG 185
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: D8LKX8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX8_ECTSI) HSP 1 Score: 238 bits (607), Expect = 7.740e-67 Identity = 142/329 (43.16%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 334 RLASFLSSVTTAEDNVVPGLDNVNESEEEEDG--EGLCCLVTDCGRERMSSDYFCSRHVDKGKRVSWKAAKRMVQTMSKGLYSMSTVVQGEKLGQFLDTEMPSMNK----------LKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADP 1284
+ A+FLS+ AE +V ++ EE DG EG C V C + + C H KR S + MV S S ++ +K+ +N+ P+ + ERF+RQE + LGEA+ LI+ I R E N + L APV +VGD+HGQ+FDL+++L R + LFLGDYVDRG+FSCEV+L+L ALK+ HP+ + LIRGNHEC S++ HFGFK DECK KYGL VYYRFL F+ MP+CALI+ GR F HGGISP + L I ++R AEPEM+G LCD+LWADP
Sbjct: 87 KFAAFLSA-NKAEKHVPTFAQGQDQEEENMDGQTEGRVCKVEGCDNRAVENVAVCPMHT---KRYSVVSVSAMVHQFKDTKLS-SVALKSDKV---------EVNRGGVAGAGEAGFDPDAIGERFRRQERLELGEAVALIEAVK--NIFREEDNMVPLDAPVMVVGDVHGQYFDLLNILKRW---RPDHNLLFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFK------------DECKMKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIRHLSDIEEIDRFAEPEMEGPLCDMLWADP 384
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A6H5L564_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L564_9PHAE) HSP 1 Score: 238 bits (608), Expect = 9.640e-66 Identity = 142/320 (44.38%), Postives = 184/320 (57.50%), Query Frame = 1
Query: 334 RLASFLSSVTTAEDNVVPGLDNVNESEEEEDG--EGLCCLVTDCGRERMSSDYFCSRHVDKGKRVSWKA-AKRMVQTMSKGLYSMSTVVQGEKLGQFLDTEMPSMNKLKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADP 1284
+LA+FLS+ AE +V ++ E DG EG C V C + + C H + VS A R T + S V+ + G E P+ + ERF+RQE + LGEA+ LI+ I R E N + L APV +VGD+HGQ+FDL+++L R + LFLGDYVDRG+FSCEV+L+L ALK+ HP+ + LIRGNHEC S++ HFGFK DECK KYGL VYYRFL F+ MP+CALI+ GR F HGGISP + L I ++R AEPEM+G LCD+LWADP
Sbjct: 126 KLAAFLSA-NKAEKHVPTFAQGQDQEEANVDGQTEGRVCKVEGCDNRAVENVAVCPMHTKRYSVVSVSAMVHRFKDTKLSSVALKSDKVEVNRGGVAGAGEAG----FDPDAIGERFRRQERLELGEAVALIEAVK--NIFREEDNMVPLDAPVMVVGDVHGQYFDLLNILKRW---RPDHNLLFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFK------------DECKVKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIQHLSDIEEIDRFAEPEMEGPLCDMLWADP 423
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A4D9CPK7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPK7_9STRA) HSP 1 Score: 230 bits (587), Expect = 8.960e-63 Identity = 124/253 (49.01%), Postives = 157/253 (62.06%), Query Frame = 1
Query: 646 LKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCG--------------------SPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADP----SDDPGVTNIDSLSDQV 1332
L P L++RF+ + + LGE L+D+A +IL+ EPN L L+APV VGD+HGQFFDL+ + G SP S +LFLGDYVDRG +SCEVLLYLLALKV +P IHL+RGNHE R TT+FGFK +ECKAKYGLPVYYRFL FE +PLCA+++ ++GR F HGGISP + +L +I ++R EP G LCDLLWADP DPG+ + +QV
Sbjct: 274 LDPPALADRFRSHQLMELGEIFELLDRAR--DILKAEPNILTLQAPVTCVGDMHGQFFDLLDLFGRAGGAPGTREHASPFPPASPGSFSPNP-SRFLFLGDYVDRGAYSCEVLLYLLALKVAYPDLIHLLRGNHETRGATTYFGFK------------EECKAKYGLPVYYRFLLVFESLPLCAVVETDYGRLFACHGGISPEIQTLAEIQRIDRFVEPGASGSLCDLLWADPWHEKKVDPGINGDATDKEQV 511
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: A0A812W8V9_SYMMI (Serine/threonine-protein phosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W8V9_SYMMI) HSP 1 Score: 207 bits (527), Expect = 2.850e-61 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 697 LGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPGVTNIDSL 1320
+GEA+ LI++A A I+ EPN L L+APV VGD+HGQF+DLI++ + G P G YLFLGDYVDRG FSCEV+L LLA KV +P +I LIRGNHEC S++ HFGFK +ECK KYG+ VYYRFL F+ +PL A++ +G F HGG+SP ++ I ++R EPE + L D+LW+DP + V ++ +
Sbjct: 1 MGEAMDLINRAKA--IISREPNVLRLEAPVMAVGDIHGQFYDLINIWEVGGKPGSGGMYLFLGDYVDRGSFSCEVILTLLAYKVTYPDRIWLIRGNHECASVSGHFGFK------------EECKMKYGMQVYYRFLLLFQTLPLAAVVSTAYGDLFACHGGLSPNAVHIEDIERIDRFVEPEENQTLLDILWSDPISEDRVADMTGM 194
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: F0XWE7_AURAN (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWE7_AURAN) HSP 1 Score: 206 bits (525), Expect = 2.790e-60 Identity = 107/198 (54.04%), Postives = 131/198 (66.16%), Query Frame = 1
Query: 727 ASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHGRYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPS-DDPGVTNIDS 1317
A+ E + EPN L L AP+ +VGDLHGQ+ DL++ G DG+ LFLGDYVDRG CEVLLYLLALKV HP +HL+RGNHE R+ T HFGF+A EC+ KYGL Y+ F R FE MPL A+ID + G+ F HGGI P L S+ + AL+RRAEP +GLLCD+LWADPS DD G +D+
Sbjct: 7 AAGRETMAAEPNVLRLAAPLVLVGDLHGQYADLMTAFYGGGRAGDGA-LLFLGDYVDRGARGCEVLLYLLALKVAHPGLVHLLRGNHESRACTGHFGFRA------------ECRRKYGLGAYHEFCRVFEAMPLAAVIDCDFGKVFACHGGIGPDLKSIADLEALDRRAEPPDEGLLCDVLWADPSRDDAGGAAVDA 191
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Match: D7FN84_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN84_ECTSI) HSP 1 Score: 210 bits (535), Expect = 7.950e-60 Identity = 111/222 (50.00%), Postives = 143/222 (64.41%), Query Frame = 1
Query: 646 LKPEILSERFQRQETVTLGEALFLIDQASALEILRGEPNALELKAPVKIVGDLHGQFFDLISMLDNCGSPRDGSSYLFLGDYVDRGEFSCEVLLYLLALKVEHPQKIHLIRGNHECRSLTTHFGFKARKFGTKKKPTIDECKAKYGLPVYYRFLRCFELMPLCALIDNEHG--RYFCTHGGISPGLTSLDQIAALNRRAEPEMDGLLCDLLWADPSDDPGVT 1305
L P+ L+ERF RQ+ ++ EA L+ Q + EIL E N LEL+ +VGDLHGQFFDL+++L G P + YLFLGDYVDRG +SCEV LYL++LK+ P+++HLIRGNHE + T GFK DEC AKYG +Y FL CF +P+CA++ + FC HGGISP L +++ I L RR EPE LL DLLW+DPSDDP +T
Sbjct: 196 LSPDGLAERFSRQDVLSREEAEQLLRQGT--EILDKEDNVLELEGETVVVGDLHGQFFDLLTLLKTYGEPPE-RQYLFLGDYVDRGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFK------------DECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSLT 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19245.5324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19245.5324.1 >prot_H-elongata_contig19245.5324.1 ID=prot_H-elongata_contig19245.5324.1|Name=mRNA_H-elongata_contig19245.5324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=447bp CVNDLFCDGSLCCPTCCEIHSCVSPAAFPAVPASPIPSPKACGASSEGDRback to top mRNA from alignment at H-elongata_contig19245:136..6103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19245.5324.1 ID=mRNA_H-elongata_contig19245.5324.1|Name=mRNA_H-elongata_contig19245.5324.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5968bp|location=Sequence derived from alignment at H-elongata_contig19245:136..6103- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19245:136..6103- >mRNA_H-elongata_contig19245.5324.1 ID=mRNA_H-elongata_contig19245.5324.1|Name=mRNA_H-elongata_contig19245.5324.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2682bp|location=Sequence derived from alignment at H-elongata_contig19245:136..6103- (Himanthalia elongata Himel1 dioecious)back to top |