mRNA_H-elongata_contig19198.5315.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19198.5315.1
Unique NamemRNA_H-elongata_contig19198.5315.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.190e-92
Identity = 201/415 (48.43%), Postives = 233/415 (56.14%), Query Frame = 1 
Query:    1 RKVERLKRLVGRKGFSNNPAAEINDVMKLFEGDMAGLQSDITTLQRHAEGKSRASPPVNSQRRKHCQHIVTALQNSAQGHTKAFRDALLLRAAVEKQQTDRQRIFSHSRGVAPATQLDYPLFGGNS------------------------------------GVRNRGARRRVEPPPPFVPRPLPPQSPSRLSEGESGRTFPS--------------NFDSGSASVIHTSAPPAQSASIPMVAKPMVRPELGGGSSSSGIKGETVSREIMSPFGGAANFSQSACSPGSLGGRAGGFGGKQGGGQVPLPP------TEPYRAGNGAFGLRKRLGQDGGIDGEEEARRASWQVQVQEDARDRVEESHKVEKMIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAAHAFAAEGQANLAK 1077
            R + RLK+LVGRKGFSNNPAAEI+DVMKLFEGDMAGLQ DI++LQR+A+G +R SPP NSQR+ HC  IVT L+ SAQ HTKAFRDAL+LRAAVEKQQ +RQR FSHSRGVAPATQLDYPLFG +                                     G R  G    V P P            +R   G  G ++P               N +  + S            ++P   +P          + S   G          FG A  +   A   GS  GRA              PP      TE  R G  A GLRKR G++ G D EEE+RRA+WQVQVQED++ RV+ESHKVEKMIGDLG MFSRFSTMVAAQ+EVVM IEDDVEAAHAFA EGQA+LAK
Sbjct:   63 RLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFPSG-------NGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXRTDSN-GGFRAGPHTAPTFGSANGYVPPAAGGGS--GRA----------HAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAK 457
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.280e-15
Identity = 101/363 (27.82%), Postives = 137/363 (37.74%), Query Frame = 1 
Query:    1 RKVERLKRLVGRKGFSNNPAAEINDVMKLFEGDMAGLQSDITTLQRHAEGKSRASPPV-----------------NSQRRKHCQHIVTALQNSAQGHTKAFRDALLLRAAVEKQQTDRQRIFSHSRGVAPATQLDYPLFGGNSGVRNRGARRRVEPPPPFVPRPLPPQSPSRLSEGESGRTFPSNFDSGSASVIHTSAPPAQSASIPMVAKPMVRPELGGGSSSSGIKGETVSREIMSPFGGAANFSQSACSPGSLGGRAGGFGGKQGGGQVPLPPTEPYRAGNGAFGLRKRLGQDGGIDGEEEARRASWQVQVQEDARDRVEESHKVEKMIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAA 1038
            R V+RL+RLV RKG  N+P AEI DV  +F+ D+AGLQ DI +L RHA    R +                    + QR +HC  +V  L+  A  H +AF+ AL  R  + ++Q DR++ F+HS    P    D PL                 PP P +PR     +P  L      R F    ++ S   +     P                           +G T+             F Q+                     Q  L P EP R                                   D   R+ E+  VEK I +LGQ FSR + +VAAQ EVV+RI+DD+EAA
Sbjct:   64 RLVQRLQRLVTRKGMHNDPTAEIEDVTAVFKKDLAGLQGDIESLLRHAGRHYRLAGVDGGRKDNVDRGHEKGGCHDQQRHRHCTCVVDTLRTRAGEHARAFQAALQTRQHILQEQADRRKRFTHS-APGPRLAYDSPLL--------------PRPPSPPLPR-----NPPALYLPPPPRAFGGRAEASSEGRLRRRYAPXXXXXXXXX-----------------XRGTTLRP----------GFPQAQQQ------------------QQLLRPQEPQR-----------------------------------DTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAA 326
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.100e-9
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:  940 MIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAAHAFAAEGQANLAK 1077
            MIG+LG MFS+FS +VAAQ+E V+ IEDDVE AH FA +G A+L++
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSR 46
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 57.4 bits (137), Expect = 5.590e-7
Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 1 
Query:  889 VQEDARDRVEESHKVEKMIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAAHAFAAEGQANLAK 1077
            +++ +R R++ +H +EK IG LG++FSRFS++VA Q EVV R++DDVE A      G A L K
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLK 64
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 55.1 bits (131), Expect = 6.310e-6
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:  892 QEDARDRVEESHKVEKMIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAAHAFAAEGQANL 1071
            Q D   R+ E+  VEK I +LGQ FSR + +VAAQ EVVMRI+DD+EAA     +G A +
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEM 84
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BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Match: A0A7S4E5R4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5R4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.460e-5
Identity = 30/66 (45.45%), Postives = 47/66 (71.21%), Query Frame = 1 
Query:  880 QVQVQEDARDRVEESHKVEKMIGDLGQMFSRFSTMVAAQDEVVMRIEDDVEAAHAFAAEGQANLAK 1077
            Q+ ++++AR R++ +  VEK IG LG++FSRF+ +VA Q EVV R++DDVEA+ A    G + L +
Sbjct:  233 QLVLEQNARQRLDHALDVEKEIGKLGEVFSRFAGLVAQQAEVVERLDDDVEASRADVDAGHSELTR 298
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19198.5315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.190e-9248.43t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9CWV4_9STRA2.280e-1527.82t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835ZFW2_9STRA6.100e-963.04t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN5.590e-747.62t-SNARE coiled-coil homology domain-containing pro... [more]
I2CQ48_NANGC6.310e-651.67t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4E5R4_9STRA3.460e-545.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19198contigH-elongata_contig19198:3117..5929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue3.4e-74
Seed eggNOG ortholog2880.D8LR19
Preferred nameSTX5
KEGG koko:K08490
KEGG Pathwayko04130,map04130
GOsGO:0000003,GO:0000139,GO:0000149,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0001505,GO:0002164,GO:0002376,GO:0002520,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006836,GO:0006873,GO:0006875,GO:0006878,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008104,GO:0008150,GO:0008283,GO:0008361,GO:0009306,GO:0009653,GO:0009791,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0017156,GO:0019222,GO:0019725,GO:0019953,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030097,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031201,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033206,GO:0034498,GO:0034613,GO:0035166,GO:0035167,GO:0042147,GO:0042175,GO:0042176,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045184,GO:0045732,GO:0045786,GO:0045930,GO:0046903,GO:0046907,GO:0046916,GO:0046983,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048278,GO:0048280,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051726,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0060305,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0090166,GO:0090174,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140013,GO:0140029,GO:0140056,GO:1903008,GO:1903046,GO:1903047,GO:1903358
EggNOG free text desc.vesicle docking
EggNOG OGsKOG0812@1,KOG0812@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-06_004720.1
Exons5
Model size1101
Cds size1002
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930095.5628994-UTR-H-elongata_contig19198:3116..31371622930095.5628994-UTR-H-elongata_contig19198:3116..3137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19198 3117..3137 -
1691679278.4151564-UTR-H-elongata_contig19198:3116..31371691679278.4151564-UTR-H-elongata_contig19198:3116..3137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19198 3117..3137 -
1622930095.646534-UTR-H-elongata_contig19198:5851..59291622930095.646534-UTR-H-elongata_contig19198:5851..5929Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19198 5852..5929 -
1691679278.4647427-UTR-H-elongata_contig19198:5851..59291691679278.4647427-UTR-H-elongata_contig19198:5851..5929Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19198 5852..5929 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930095.5751941-CDS-H-elongata_contig19198:3137..32871622930095.5751941-CDS-H-elongata_contig19198:3137..3287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3138..3287 -
1691679278.425492-CDS-H-elongata_contig19198:3137..32871691679278.425492-CDS-H-elongata_contig19198:3137..3287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3138..3287 -
1622930095.5876105-CDS-H-elongata_contig19198:3729..38301622930095.5876105-CDS-H-elongata_contig19198:3729..3830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3730..3830 -
1691679278.4333975-CDS-H-elongata_contig19198:3729..38301691679278.4333975-CDS-H-elongata_contig19198:3729..3830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3730..3830 -
1622930095.6025348-CDS-H-elongata_contig19198:3968..45181622930095.6025348-CDS-H-elongata_contig19198:3968..4518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3969..4518 -
1691679278.4416587-CDS-H-elongata_contig19198:3968..45181691679278.4416587-CDS-H-elongata_contig19198:3968..4518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 3969..4518 -
1622930095.6174605-CDS-H-elongata_contig19198:4846..49881622930095.6174605-CDS-H-elongata_contig19198:4846..4988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 4847..4988 -
1691679278.4492147-CDS-H-elongata_contig19198:4846..49881691679278.4492147-CDS-H-elongata_contig19198:4846..4988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 4847..4988 -
1622930095.6315386-CDS-H-elongata_contig19198:5792..58511622930095.6315386-CDS-H-elongata_contig19198:5792..5851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 5793..5851 -
1691679278.4570467-CDS-H-elongata_contig19198:5792..58511691679278.4570467-CDS-H-elongata_contig19198:5792..5851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19198 5793..5851 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19198.5315.1prot_H-elongata_contig19198.5315.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19198 3138..5851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19198.5315.1

>prot_H-elongata_contig19198.5315.1 ID=prot_H-elongata_contig19198.5315.1|Name=mRNA_H-elongata_contig19198.5315.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp
MKLFEGDMAGLQSDITTLQRHAEGKSRASPPVNSQRRKHCQHIVTALQNS
AQGHTKAFRDALLLRAAVEKQQTDRQRIFSHSRGVAPATQLDYPLFGGNS
GVRNRGARRRVEPPPPFVPRPLPPQSPSRLSEGESGRTFPSNFDSGSASV
IHTSAPPAQSASIPMVAKPMVRPELGGGSSSSGIKGETVSREIMSPFGGA
ANFSQSACSPGSLGGRAGGFGGKQGGGQVPLPPTEPYRAGNGAFGLRKRL
GQDGGIDGEEEARRASWQVQVQEDARDRVEESHKVEKMIGDLGQMFSRFS
TMVAAQDEVVMRIEDDVEAAHAFAAEGQANLAK*
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mRNA from alignment at H-elongata_contig19198:3117..5929-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19198.5315.1 ID=mRNA_H-elongata_contig19198.5315.1|Name=mRNA_H-elongata_contig19198.5315.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2813bp|location=Sequence derived from alignment at H-elongata_contig19198:3117..5929- (Himanthalia elongata Himel1 dioecious)
CGGAAGGTCGAGCGACTCAAGAGGCTAGTGGGACGTAAGGGCTTCAGCAA
TAACCCGGCGGCGGAGATCAACGATGTCATGAAGCTCTTTGAGGGGGACA
TGGCCGGCCTGCAGAGCGACATCACGACTCTGCAGAGGTGTGGCGCACAG
TGCTTGGGGGTCGTCCCTCTCGCCAACGCCGCTTGACCTTCCATCAAATC
CCCCGAGTAGCCTTTGCTTCAGAGTAGCGCGATCATCTCTCTTCCGTTGT
GTGTTGTCCACTTTCTCCTCATGCTAACGCTCAAGTGTCACGATGATAAC
ATCGTGGCGGGCAGCGGTTAGTTCAAGGATTTTGTGGTGCTCGGGTGATT
TGAAATGGCGGTGGGGATGTGCACTCTGCTAGAACTAAAAAAAAGTAACC
GCCGAGCCTCCATGACGGCCGTGAGGTATTTTTTGGGACGACCTCGAAGA
GGCTACCGTACGAAGGTGACGTCATCTCAAGTCTTTACAGGGGATTTGAA
CGCCTGCTCCCCCCACCGCCCTACCTTCCCTCGCCAAATGGCCCCTCATT
TAGATAGTACGTAGAACCTTACAAATTTCTCGTTTCGTGGTGCCTGCCGT
TGCGACTGGCGTGTTTACCTTATTAATAGGAGTATTTGCACCAGAGTGGA
CACCAATTCCCGGGGATTGTTGTCTTTGCCATCGACGATCTACGGTAGGC
AGTGCAAAAAATCATAACATGATAGCATGTGCCGAGCATGGTATGTATGT
GTGTATGCTCCCGCGCCCCAATATGTGTAAATTAGGAGTTCGATTATCAC
CAGGATGTGTGTAGGGTGTGTGCATGCTCCCACGCACCCATCTGAACCCA
ACGTATCCCCGTCCGGTGTGGGTGGTGTGGACGGTGCACAAAAACACGAC
GACACTTGAATAACGCGACGAATCCGAACGACTGAAATCAGACATGCGGA
GGGCAAGAGCAGGGCCAGTCCGCCGGTGAATAGCCAACGGCGGAAGCACT
GCCAGCACATCGTAACGGCGCTGCAGAACAGCGCGCAAGGACACACCAAA
GCGTTCCGCGATGCGCTTCTCCTGCGGGCCGCGGTGAGCCAAGCCAACCA
TCGCTAGGGAGGCGCCTTAACCGCTTTGTGCTGCTGTATCGCACCAAATG
ATGAAGTAAATAAATTTTAAATGTTTCTTCACGGCACCCGTTCGTGGTCC
TCAAGCGACAGAGTGGTCACAAAACACCCGAGAACACGGTCTTGCCTGGT
GATCGTGCCTCCGTCGTGTCTTCACATGTGTGTTTGTTGCACAAGGTATG
CAGGTGCATTGTCTTAGGTAGTGCAGCAGCAGCAGCAGTCTTCAAACCGA
AAACATCCGTCACGCAGAAAATTAACGACGTTTGATCACGGTTGCCGTTT
TATTTGGGCAGGTCGAGAAGCAGCAGACTGATCGGCAACGGATCTTCTCC
CACTCGCGCGGCGTGGCCCCGGCGACCCAACTCGACTATCCCCTCTTCGG
CGGCAACTCCGGCGTTCGAAATCGTGGCGCGCGCCGTCGTGTGGAGCCTC
CCCCACCTTTTGTCCCGCGTCCTCTCCCGCCCCAGTCGCCCTCTAGACTA
AGTGAAGGAGAGAGCGGGCGTACCTTTCCCTCGAATTTCGATAGCGGAAG
CGCCAGTGTGATCCACACGTCCGCACCTCCAGCGCAGTCGGCGTCAATAC
CAATGGTGGCGAAGCCGATGGTCCGACCGGAGCTTGGGGGCGGTTCGAGC
AGCAGCGGGATCAAGGGGGAAACTGTCTCTAGGGAAATAATGTCGCCCTT
TGGCGGCGCCGCGAATTTTTCCCAGAGTGCATGTAGTCCGGGAAGTCTAG
GGGGTAGAGCGGGGGGATTCGGAGGGAAACAGGGTGGTGGCCAGGTTCCG
CTGCCCCCGACGGAGCCATACAGGGCAGGCAACGGTGCCTTCGGACTGCG
AAAACGATTAGGTGTGGATCTCAAAAAGAAAGGGTGGGTAGGGAGTAAAA
AATATTTAGTTTCGTATTGACATATATTTTTCCGAGGTCCCTTAGAATAG
TGTTTACAATCACATGCGTGACGTCATTGATGGTGTGGATGTATCTAAGG
TCAAGACGGTGGAATCGATGGCGAAGAGGAAGCCAGGCGAGCTTCGTGGC
AGGTCCAGGTTCAAGAAGACGCTAGGGATAGAGTGGAAGAATCGCACAAG
GTGCGTTTGCAATCGTCAATGCGGTACCACAGACAGAGGGGCAAACCACC
GGGGGGGAAAAGCAATGACTCCGGATCGTGGGATGCGCCTTCATGCCATG
CATGTTAAAGGGGGTGAAATATAATGTACGAGTGTAGATACTCCTGGATT
GCTTGTGCTCTGGTAGACAAGCATATACGATTCATAGCGCGCTTCGGCTG
TATATGGGGGGGGGGGGTACTGCAGCGGCTGCAAACCATGGTGATGTATC
TTTGAGATGCACTCCGGGTGTATGAGGACTGCTGCAGTTGGTACGCGTCG
GAGCGCCTCGACTCTGCTGTTTTCGAGTACGGCGAGGGCCTGATCACGGA
GAAGGTGTCAGGATTTCGAACCGCCTGTGATGTATCCTTGAGGGCAAATG
CGCCGCCTCGGTCCGCATAATATTTTACGACTTGTCTTTAAGGTGGAAAA
GATGATTGGAGATCTGGGTCAGATGTTCAGCCGATTCTCGACGATGGTCG
CGGCCCAGGACGAGGTGGTGATGCGCATCGAGGACGACGTGGAGGCGGCG
CACGCCTTCGCTGCGGAGGGGCAGGCGAACCTTGCGAAGTGAGCCAGTCG
GCCTTGGAGCATC
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Coding sequence (CDS) from alignment at H-elongata_contig19198:3117..5929-

>mRNA_H-elongata_contig19198.5315.1 ID=mRNA_H-elongata_contig19198.5315.1|Name=mRNA_H-elongata_contig19198.5315.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at H-elongata_contig19198:3117..5929- (Himanthalia elongata Himel1 dioecious)
ATGAAGCTCTTTGAGGGGGACATGGCCGGCCTGCAGAGCGACATCACGAC
TCTGCAGAGATGAAGCTCTTTGAGGGGGACATGGCCGGCCTGCAGAGCGA
CATCACGACTCTGCAGAGACATGCGGAGGGCAAGAGCAGGGCCAGTCCGC
CGGTGAATAGCCAACGGCGGAAGCACTGCCAGCACATCGTAACGGCGCTG
CAGAACAGCGCGCAAGGACACACCAAAGCGTTCCGCGATGCGCTTCTCCT
GCGGGCCGCGACATGCGGAGGGCAAGAGCAGGGCCAGTCCGCCGGTGAAT
AGCCAACGGCGGAAGCACTGCCAGCACATCGTAACGGCGCTGCAGAACAG
CGCGCAAGGACACACCAAAGCGTTCCGCGATGCGCTTCTCCTGCGGGCCG
CGGTCGAGAAGCAGCAGACTGATCGGCAACGGATCTTCTCCCACTCGCGC
GGCGTGGCCCCGGCGACCCAACTCGACTATCCCCTCTTCGGCGGCAACTC
CGGCGTTCGAAATCGTGGCGCGCGCCGTCGTGTGGAGCCTCCCCCACCTT
TTGTCCCGCGTCCTCTCCCGCCCCAGTCGCCCTCTAGACTAAGTGAAGGA
GAGAGCGGGCGTACCTTTCCCTCGAATTTCGATAGCGGAAGCGCCAGTGT
GATCCACACGTCCGCACCTCCAGCGCAGTCGGCGTCAATACCAATGGTGG
CGAAGCCGATGGTCCGACCGGAGCTTGGGGGCGGTTCGAGCAGCAGCGGG
ATCAAGGGGGAAACTGTCTCTAGGGAAATAATGTCGCCCTTTGGCGGCGC
CGCGAATTTTTCCCAGAGTGCATGTAGTCCGGGAAGTCTAGGGGGTAGAG
CGGGGGGATTCGGAGGGAAACAGGGTGGTGGCCAGGTTCCGCTGCCCCCG
ACGGAGCCATACAGGGCAGGCAACGGTGCCTTCGGACTGCGAAAACGATT
AGGTCGAGAAGCAGCAGACTGATCGGCAACGGATCTTCTCCCACTCGCGC
GGCGTGGCCCCGGCGACCCAACTCGACTATCCCCTCTTCGGCGGCAACTC
CGGCGTTCGAAATCGTGGCGCGCGCCGTCGTGTGGAGCCTCCCCCACCTT
TTGTCCCGCGTCCTCTCCCGCCCCAGTCGCCCTCTAGACTAAGTGAAGGA
GAGAGCGGGCGTACCTTTCCCTCGAATTTCGATAGCGGAAGCGCCAGTGT
GATCCACACGTCCGCACCTCCAGCGCAGTCGGCGTCAATACCAATGGTGG
CGAAGCCGATGGTCCGACCGGAGCTTGGGGGCGGTTCGAGCAGCAGCGGG
ATCAAGGGGGAAACTGTCTCTAGGGAAATAATGTCGCCCTTTGGCGGCGC
CGCGAATTTTTCCCAGAGTGCATGTAGTCCGGGAAGTCTAGGGGGTAGAG
CGGGGGGATTCGGAGGGAAACAGGGTGGTGGCCAGGTTCCGCTGCCCCCG
ACGGAGCCATACAGGGCAGGCAACGGTGCCTTCGGACTGCGAAAACGATT
AGGTCAAGACGGTGGAATCGATGGCGAAGAGGAAGCCAGGCGAGCTTCGT
GGCAGGTCCAGGTTCAAGAAGACGCTAGGGATAGAGTGGAAGAATCGCAC
AAGGTCAAGACGGTGGAATCGATGGCGAAGAGGAAGCCAGGCGAGCTTCG
TGGCAGGTCCAGGTTCAAGAAGACGCTAGGGATAGAGTGGAAGAATCGCA
CAAGGTGGAAAAGATGATTGGAGATCTGGGTCAGATGTTCAGCCGATTCT
CGACGATGGTCGCGGCCCAGGACGAGGTGGTGATGCGCATCGAGGACGAC
GTGGAGGCGGCGCACGCCTTCGCTGCGGAGGGGCAGGCGAACCTTGCGAA
GTGAGTGGAAAAGATGATTGGAGATCTGGGTCAGATGTTCAGCCGATTCT
CGACGATGGTCGCGGCCCAGGACGAGGTGGTGATGCGCATCGAGGACGAC
GTGGAGGCGGCGCACGCCTTCGCTGCGGAGGGGCAGGCGAACCTTGCGAA
GTGA
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