mRNA_H-elongata_contig19180.5309.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: D7G2B4_ECTSI (Cation_ATPase_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B4_ECTSI) HSP 1 Score: 275 bits (704), Expect = 5.930e-84 Identity = 144/163 (88.34%), Postives = 153/163 (93.87%), Query Frame = 1
Query: 1 VYGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTIA 489
+YGPNSLKEP KQSL SM+LEQFEDRLVQILL VA+LSGVLS FE+DPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQP+NACVVRDG+L+GALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAV K + V +STIA
Sbjct: 71 MYGPNSLKEPEKQSLLSMVLEQFEDRLVQILLAVAVLSGVLSAFEDDPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPDNACVVRDGELIGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVFKSTDAVPVDSTIA 233
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A835YQB3_9STRA (Cation_ATPase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB3_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.720e-68 Identity = 121/161 (75.16%), Postives = 138/161 (85.71%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTI 486
YGPNSL EP +QSL SM+LEQF+DRLVQILL VA+LSGVLSFFEE+ AFVEP SI+ IL LNA +GVWQSRSAQDSLDAL+KLQP+ CV+RDG V ALPA ELVPGD+MYLRVGDK+AADARLL+LKTTTF +E SLTGES+AVSK +PV A+S I
Sbjct: 134 YGPNSLLEPPRQSLLSMLLEQFQDRLVQILLAVAVLSGVLSFFEEEASAFVEPLSIVVILALNAIIGVWQSRSAQDSLDALRKLQPDTVCVLRDGVWVSALPAEELVPGDIMYLRVGDKIAADARLLALKTTTFRTDEASLTGESMAVSKNTDPVPADSCI 294
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A4D9D109_9STRA (Cation_ATPase_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D109_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.830e-60 Identity = 104/160 (65.00%), Postives = 134/160 (83.75%), Query Frame = 1
Query: 7 GPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTI 486
G N L P + SL +++EQFEDRLVQIL++VA++S VLS FE+DP AFVEP I+ ILV+NA VG+WQ RSA+ +LDALKKLQPENACV+R+G+ + LPA ELVPGD++++RVGDKV ADAR+L+LKTTTF C+EGSLTGES +VSKF++PV+ E+ I
Sbjct: 155 GLNELSPPKQTSLLELVVEQFEDRLVQILVMVAVVSSVLSLFEDDPTAFVEPLVIVMILVINAFVGIWQGRSAEGALDALKKLQPENACVLREGRWLNDLPARELVPGDIIFVRVGDKVPADARILALKTTTFSCDEGSLTGESASVSKFLDPVSEEARI 314
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A6V1P7M5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M5_HETAK) HSP 1 Score: 192 bits (489), Expect = 7.330e-54 Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 1
Query: 1 VYGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDPKAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTI 486
+YG N L L+ ++LEQFEDRLVQILLVVA++S VL+ E + F+EP I AIL+LNA VGVWQS+SA+DSL+ALK+LQPE A +R G+ +G LPA ELVPGD++++RVGDKV ADARLL LKTTTF +EGSLTGESV VSK EPV A++ I
Sbjct: 110 IYGRNELTAAEATPLWKLVLEQFEDRLVQILLVVAVMSAVLATLEGEEGGFIEPGVIFAILILNAIVGVWQSKSAEDSLEALKRLQPEVATALRGGQWLGELPAQELVPGDVIFVRVGDKVPADARLLGLKTTTFKVDEGSLTGESVTVSKSTEPVEADAPI 271
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A7S4NFF8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NFF8_9STRA) HSP 1 Score: 179 bits (454), Expect = 4.070e-49 Identity = 99/159 (62.26%), Postives = 123/159 (77.36%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFE-----EDP----KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSK 453
+GPN+L +P +SL ++ILEQF+DRLVQILL VA LSGV S+FE ED ++FVEP ILAILVLNAAVGVWQS+SA+ SL+ALKKLQP A V+RD K + L A+ELVPGD++ RVGDK++ADAR++ LKT+T +EGSLTGESV V K
Sbjct: 229 HGPNALVQPPGKSLLTLILEQFDDRLVQILLAVAALSGVFSYFEMRATGEDGEGLLRSFVEPLVILAILVLNAAVGVWQSKSAEGSLEALKKLQPSLASVLRDDKWIDGLDASELVPGDVISFRVGDKISADARVVQLKTSTVSVDEGSLTGESVTVQK 387
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A8J9SCB4_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SCB4_PHATR) HSP 1 Score: 170 bits (430), Expect = 3.750e-48 Identity = 95/165 (57.58%), Postives = 121/165 (73.33%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDP---------------KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSK 453
+G NSL++ +S + +ILEQFEDRLVQILLVVALLSGV S+FE K+FVEP ILAILV+NAAVGVWQS+SA DSLDAL+++Q A V+RDG +L A++LVPGD++ LRVGDK+ AD+RLLSL++++ +EGSLTGESV V K
Sbjct: 15 FGKNSLEQSKSKSTWQLILEQFEDRLVQILLVVALLSGVFSYFEVRQSATAAAELATDEALWKSFVEPLVILAILVVNAAVGVWQSQSASDSLDALQRMQSATATVLRDGVWKSSLEASDLVPGDIIELRVGDKIPADSRLLSLQSSSLQIDEGSLTGESVTVGK 179
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A835Y4I5_9CHLO (Cation_ATPase_N domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y4I5_9CHLO) HSP 1 Score: 174 bits (442), Expect = 1.600e-47 Identity = 92/160 (57.50%), Postives = 123/160 (76.88%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDP-----KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPV 468
YG N L++ KQS++SMILEQFED LV+IL++ A +S VL++FEED +AF+EP IL IL+LNAAVGVWQ +A+ +L+ALK+LQ E A V R+GK+V LP+ EL+PGD+++L VGDKV AD R+++LKT T E+ SLTGESVAV+K EP+
Sbjct: 41 YGYNELEKEAKQSIWSMILEQFEDTLVRILMLAAFVSFVLAWFEEDSHEEGFRAFIEPLVILLILILNAAVGVWQESNAESALEALKELQTETAHVTRNGKMVSDLPSRELLPGDIVHLHVGDKVPADCRVVALKTATVRAEQASLTGESVAVNKGTEPI 200
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A7R9USG3_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9USG3_DIALT) HSP 1 Score: 169 bits (427), Expect = 2.400e-47 Identity = 92/163 (56.44%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDP--KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTI 486
+GPN L + + ++L QF+D LV+ILL A++S VL+FFEE AFVEP IL ILV+NAAVGVWQ +A+ +LDALK+LQ A VVR+G LV ALPA+ELVPGD++++RVGDKV AD R+L LKTTT +EGSLTGES V K +PV+ ++ I
Sbjct: 15 HGPNELDKEEPTPFWKLVLAQFDDMLVKILLGAAMISFVLAFFEEHEGLTAFVEPFVILLILVINAAVGVWQESNAESALDALKELQSSTATVVRNGALVPALPASELVPGDVVHVRVGDKVPADCRVLLLKTTTVRTDEGSLTGESATVQKVTDPVSPDARI 177
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: D8UJK8_VOLCA (Cation_ATPase_N domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8UJK8_VOLCA) HSP 1 Score: 172 bits (436), Expect = 1.030e-46 Identity = 93/161 (57.76%), Postives = 123/161 (76.40%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDP-----KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVA 471
YG N L++ KQS+++MI EQFED LV+ILL+ A++S L++FEED +AF+EP IL ILVLNAAVGVWQ +A+ +L+ALK+LQ E A V R+GKL+ LPA EL+PGD+++L VGDKV AD R+++LKT T E+ SLTGESVAV+K +PVA
Sbjct: 43 YGYNELEKEAKQSIWAMIAEQFEDTLVRILLLAAIVSFGLAWFEEDSHEEGIRAFIEPLVILLILVLNAAVGVWQESNAESALEALKELQTETAHVTRNGKLLSDLPARELLPGDVVHLHVGDKVPADCRMVALKTATVRAEQASLTGESVAVNKSTDPVA 203
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Match: A0A166CXC0_DAUCS (Cation_ATPase_N domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CXC0_DAUCS) HSP 1 Score: 171 bits (432), Expect = 3.540e-46 Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 4 YGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDP------KAFVEPASILAILVLNAAVGVWQSRSAQDSLDALKKLQPENACVVRDGKLVGALPAAELVPGDLMYLRVGDKVAADARLLSLKTTTFGCEEGSLTGESVAVSKFVEPVAAESTI 486
YG N L + H QS+FS+ILEQF D LV+ILLV A++S VL++++ D AFVEP I IL++NA VGVWQ +A+ +L+ALK++Q E ACV+R+GK V LPA ELVPGD++ LRVGDKV AD R+L+L ++T E+GSLTGES AVSK V+PV ++ I
Sbjct: 59 YGSNELDKHHGQSIFSLILEQFNDTLVRILLVAAVISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNACVGVWQESNAEKALEALKEIQSEQACVIRNGKKVTNLPAKELVPGDIVELRVGDKVPADMRVLNLVSSTLRVEQGSLTGESEAVSKNVKPVGEDTDI 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19180.5309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19180.5309.1 >prot_H-elongata_contig19180.5309.1 ID=prot_H-elongata_contig19180.5309.1|Name=mRNA_H-elongata_contig19180.5309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp VYGPNSLKEPHKQSLFSMILEQFEDRLVQILLVVALLSGVLSFFEEDPKAback to top mRNA from alignment at H-elongata_contig19180:3491..6293+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19180.5309.1 ID=mRNA_H-elongata_contig19180.5309.1|Name=mRNA_H-elongata_contig19180.5309.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2803bp|location=Sequence derived from alignment at H-elongata_contig19180:3491..6293+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19180:3491..6293+ >mRNA_H-elongata_contig19180.5309.1 ID=mRNA_H-elongata_contig19180.5309.1|Name=mRNA_H-elongata_contig19180.5309.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig19180:3491..6293+ (Himanthalia elongata Himel1 dioecious)back to top |