mRNA_H-elongata_contig19141.5293.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19141.5293.1
Unique NamemRNA_H-elongata_contig19141.5293.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 3.410e-100
Identity = 168/285 (58.95%), Postives = 196/285 (68.77%), Query Frame = 2 
Query:    2 EKNGGAMKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNLNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETCGL 856
            EKNGG +KLELGAVGVF+GTA F DNSIIST +D      T  EI RKGGAIH KG LTFEKDA F+ NLNDR  YGSGPGGAIS HVK ++ F G L MT+N ADDY+GGA+GGA FNRGD+VVDGEA F  N GGRGGAI+QEKW T VFN F TF +N+C+DT+GG +AN GG     AGS + +   +NSGDGG              L GST F+ NY  WGGA+ N   P+ Y      ++Y +P I+YP+DT+FEDN     YC D   DFDEETCGL
Sbjct:  101 EKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDES----TEEEILRKGGAIHTKGSLTFEKDATFSGNLNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTA-EDESYVMPTISYPEDTIFEDNDA--QYCNDFASDFDEETCGL 378
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 8.170e-54
Identity = 130/292 (44.52%), Postives = 163/292 (55.82%), Query Frame = 2 
Query:    5 KNGGAMKLELGAVGVFEGTATFHDNSIISTLLDS----DAAPWTS---GEIKRKGGAIHNKGDLTFEKDAVFTNN-LNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYS-SDTYKVPIITYPDDTVFEDN-GDFDSYCPDVMYDFDEETC 850
            KNGG + +  GA   F GT+ F DNS+    L +    D    T      + +KGGAIHNKG LTFE DA F  N ++  +    G  GAISN    T+ FK  L M +N A+ ++ G  GGA +NRG+++VDGE++F  N    GG IYQ   G   FNS ATF  N   +  GGG+ NYGG  +  AGS +       SGDGG GG IYN N G VTL GST F+ N A  GGAI        Y+DD S ++     + T+PDDTVFEDN  DF   CPDV +D D + C
Sbjct:  100 KNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGL-GGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAI--------YTDDGSVANGEAASVTTFPDDTVFEDNRADF---CPDV-FDGDNDNC 378
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 5.720e-53
Identity = 127/294 (43.20%), Postives = 159/294 (54.08%), Query Frame = 2 
Query:    5 KNGGAMKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGE-----------IKRKGGAIHNKGDLTFEKDAVFTNN-LNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETC 850
            KNGG + +  GA   F GT+ F DNS+    +     P + G+           I +KGGAIHNKG LTFE DA F  N ++  +    G  GAISN    T+ FK  L M +N AD ++ G  GGA +NRG++VV+GE++F  N    GG IYQ   GT  FN  ATF  N   D  GGG+ N GG  +  AGS +       SGDGG GG IYN N GVVTL GST F+ N A  GGAI         SD    +     + T+PDDTVFEDN     +CPDV ++ D + C
Sbjct:  100 KNGGVLSVAEGATATFMGTSEFSDNSVAVKQI----GPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGI-GGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYT-------SDGDEENGEPASVTTFPDDTVFEDNSA--EHCPDV-HNGDSDNC 378
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.130e-32
Identity = 92/240 (38.33%), Postives = 120/240 (50.00%), Query Frame = 2 
Query:  134 IKRKGGAIHNKGDLTFEKDAVFTNNLNDREEYGS-GPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETC 850
            I +KGGAIHNKG LTF+ DA F  N+   E     G GGAISN    T+ FK  L M +N AD  + G  GGA +NRG+++V+G ++F  N    GG I+Q   GT  FN  ATF  N   +  GGG+ N GG  +  AGS + +     SGDGG GG I+N                    WGGAI        Y++D         + T+PDD           YCPDV ++ D++ C
Sbjct:   35 IVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGL-GGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAI--------YTNDADGPG---SVTTFPDDXXXXXXRA--EYCPDV-HNGDDDNC 259
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.310e-7
Identity = 88/300 (29.33%), Postives = 124/300 (41.33%), Query Frame = 2 
Query:    8 NGGAMKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNL----NDREEYGSGPGGAISNHVKATMTFKGSLNMTE---NTADDY---YGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGT--FVFNSFATFDANRCIDTYGGGVANYG-----GTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFE----DNGDFDSYCPDVMYDFDEE 844
            NGG + +        EG A F D    S  + S        +  + GG I+N+G + FE    FT +     +  E+Y  G GGA+ N   A + FK ++ MT       +DY   Y G EGGA +  G +    +AVF DN G  GGA++    G   F+  S ATF A    +  GG + N G      T  F+ G S  +    N+GD             +V ++      N+    GGAIA   YP+              I   P D  +E     N D+D  CPDV  +  E+
Sbjct:   15 NGGVLNVAP------EGYARFLD----SVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFE--GTFTADACRVGSTAEKY-PGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGGTGVVKFLKRSKATF-ARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDASE----------MVFIKHVNFIGNSADAHGGAIAT-TYPN--------------IEFLPQDATYEGNVLQNADYDYVCPDVYVNGSED 275
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BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.600e-6
Identity = 88/300 (29.33%), Postives = 125/300 (41.67%), Query Frame = 2 
Query:    8 NGGAMKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNL----NDREEYGSGPGGAISNHVKATMTFKGSLNMTE---NTADDY---YGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGT--FVFNSFATFDANRCIDTYGGGVANYG-----GTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFE----DNGDFDSYCPDVMYDFDEE 844
            NGG + +        EG A F D    S  + S        +  + GG I+N+G + FE    FT +     +  E+Y  G GGA+ N   A + FK ++ MT       +DY   Y G EGGA +  G +    +AVF DN G  GGA++        F+  S ATF A    +  GG + N G      T  F+ G S  +    N+GD        +E   +V ++      N+    GGAIA   YP+              I   P D  +E     N D+D  CPDV  +  E+
Sbjct:  121 NGGVLNVAP------EGYARFLD----SVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFE--GTFTADACRVGSTAEKY-PGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGVTAVVKFLKRSKATF-ARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGD-------VSE---MVFIKHVDFIGNSADAHGGAIAT-TYPN--------------IEFLPQDATYEGNVLQNADYDYVCPDVYVNGSED 381
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE3.410e-10058.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ44_ECTSI8.170e-5444.52Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI5.720e-5343.20Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI2.130e-3238.33Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5L171_9PHAE1.310e-729.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G627_ECTSI3.600e-629.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19141contigH-elongata_contig19141:31..4731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2248
Cds size840
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930093.1578145-UTR-H-elongata_contig19141:30..14191622930093.1578145-UTR-H-elongata_contig19141:30..1419Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19141 31..1419 -
1691679277.5179083-UTR-H-elongata_contig19141:30..14191691679277.5179083-UTR-H-elongata_contig19141:30..1419Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19141 31..1419 -
1622930093.281957-UTR-H-elongata_contig19141:4712..47311622930093.281957-UTR-H-elongata_contig19141:4712..4731Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19141 4713..4731 -
1691679277.5903895-UTR-H-elongata_contig19141:4712..47311691679277.5903895-UTR-H-elongata_contig19141:4712..4731Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19141 4713..4731 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930093.1765974-CDS-H-elongata_contig19141:1419..14761622930093.1765974-CDS-H-elongata_contig19141:1419..1476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 1420..1476 -
1691679277.5268655-CDS-H-elongata_contig19141:1419..14761691679277.5268655-CDS-H-elongata_contig19141:1419..1476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 1420..1476 -
1622930093.1972108-CDS-H-elongata_contig19141:1818..19841622930093.1972108-CDS-H-elongata_contig19141:1818..1984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 1819..1984 -
1691679277.5350544-CDS-H-elongata_contig19141:1818..19841691679277.5350544-CDS-H-elongata_contig19141:1818..1984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 1819..1984 -
1622930093.2121909-CDS-H-elongata_contig19141:2265..24051622930093.2121909-CDS-H-elongata_contig19141:2265..2405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 2266..2405 -
1691679277.5431685-CDS-H-elongata_contig19141:2265..24051691679277.5431685-CDS-H-elongata_contig19141:2265..2405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 2266..2405 -
1622930093.224072-CDS-H-elongata_contig19141:2750..28341622930093.224072-CDS-H-elongata_contig19141:2750..2834Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 2751..2834 -
1691679277.5515413-CDS-H-elongata_contig19141:2750..28341691679277.5515413-CDS-H-elongata_contig19141:2750..2834Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 2751..2834 -
1622930093.239346-CDS-H-elongata_contig19141:3239..33321622930093.239346-CDS-H-elongata_contig19141:3239..3332Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 3240..3332 -
1691679277.559896-CDS-H-elongata_contig19141:3239..33321691679277.559896-CDS-H-elongata_contig19141:3239..3332Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 3240..3332 -
1622930093.2561963-CDS-H-elongata_contig19141:3781..39341622930093.2561963-CDS-H-elongata_contig19141:3781..3934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 3782..3934 -
1691679277.568904-CDS-H-elongata_contig19141:3781..39341691679277.568904-CDS-H-elongata_contig19141:3781..3934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 3782..3934 -
1622930093.2694578-CDS-H-elongata_contig19141:4565..47121622930093.2694578-CDS-H-elongata_contig19141:4565..4712Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 4566..4712 -
1691679277.582282-CDS-H-elongata_contig19141:4565..47121691679277.582282-CDS-H-elongata_contig19141:4565..4712Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19141 4566..4712 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19141.5293.1prot_H-elongata_contig19141.5293.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19141 1420..4712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19141.5293.1

>prot_H-elongata_contig19141.5293.1 ID=prot_H-elongata_contig19141.5293.1|Name=mRNA_H-elongata_contig19141.5293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKG
DLTFEKDAVFTNNLNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTAD
DYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFA
TFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNE
NGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYP
DDTVFEDNGDFDSYCPDVMYDFDEETCGL*
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mRNA from alignment at H-elongata_contig19141:31..4731-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19141.5293.1 ID=mRNA_H-elongata_contig19141.5293.1|Name=mRNA_H-elongata_contig19141.5293.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4701bp|location=Sequence derived from alignment at H-elongata_contig19141:31..4731- (Himanthalia elongata Himel1 dioecious)
GGAGAAAAACGGTGGGGCCATGAAGCTAGAGCTTGGAGCCGTTGGTGTGT
TCGAGGGAACGGCCACTTTCCACGACAACTCGATCATCTCCACCCTCCTA
GATTCAGATGCCGCCCCATGGACAAGCGGCGAGATTAAACGCAAGGGCGG
TGCGATTCACAATAAGGTGTCGTGTCCTGATGGTTCGGGGGAAAATCGTT
CCTCTCCGGGTATCCAATTATGCCGTGTTCATCGTGTTCATGAATTACTA
CGAGGAGGCAACCAGTTCGTGTAGTCTGATGTTGTATCATCCCGTGGATG
TGTGGTCATCTTCCTTTAGATTAGGTCGGGGTCAATAAATCCAAGGGGTA
TCGAATAAGGGCGTACAAAAGAAATTATCAAGCGTGTGTATTCGTCGTCT
TTTTGCCTATGCCCTACGATACAGCCTCTATGTACGAATTATATCCGTCG
TGCATCTTTTATAATTGTAATGTGTTCATTGTGGCTAGGTCGATATACGT
TTGTCCCGCTGATTGATAGTTCACTGATATCTTACTCTGTGCCTATTTGC
TTTGGGTTGTGTCCAGGTAGCACCATGGAAGTACGCTTTGCCTTCAGAAC
ATAATTCCCTTCTTCGACGTTTGTTGCCTTTCCTTGTCTGATATAAATGG
ATGAGTGAAATTGAGGGCAAGTTAGGGAAAAGCCGCGAACGAGCCAAAGT
ATTTGAACCACCCCCCCCCCACAAAACCCAGACAACGGATTTTCAGTAAA
TTCGCGACCCCGGTCCCATAGATGCACCTCTTCGATCAAATTCACAGGGT
GATCTCACCTTCGAGAAGGACGCCGTCTTCACTAATAACCTTAACGACAG
GGAGGAGTACGGCTCTGGACCAGGAGGCGCCATTTCCAATCACGTCAAGG
CAACAATGACCTTTAAGGGCAGCCTCAACATGACAGAGAACACCGCTGAT
GTACGTCATCGACTAAACCCTAAACGGGTTGTAGCCGTCTTAAGACAGCG
AGCGCAGCGCGCGTGCTTTCATTATTACTCTGTGTAGGGCTTTAGCCATT
ATATTTCGTATATTATGTGGGTGTTCCGCCAGTAGGTAAGCTTGGTATGA
CCTTTTCATTCGGCAAAATAGTATTTCAGTAGTTTTGATATTCCCCAGCG
TGTAAGTAAATACAGTAGAGCACGAGATGGTGATGTGTAATTGTCGAAAC
GAACAGTAAAATATAAAATATGGCATTCGCCATGAATGGCCTGAACCAGC
TCTTAACGTGGTACTGTATATCAGTATATCAATTGGTCTATCAACAATAT
CACATTTGGAACGGAATAGTGAGACCTGTTTCTACAGCTGAGTCACTTTC
GCCTCTTAAATACAAAATATGACACATTGGAACCCGTCACACCTTACAGG
ACTACTACGGAGGTGCAGAGGGCGGGGCTTTCTTCAACCGCGGTGACGTC
GTTGTCGACGGGGAGGCGGTATTCAAGGATAACTTTGGCGGCGTGAGTCA
ATAGGAAGGCATGGATCTAGAATCTGGGGCATCGCCGTCCGCACCACAGG
AAGATAAAAAATCTAGACCCTGGGGCATCACCGTGCGCACCAGTTCTTGA
GCTGGCATATTGCGAGCTTGGATTACGTGGATGCGTGCGGTTTTGGGGTG
TTTCGAATGTTGTTTAGGTCACGAATCGAGCGGCCAACGAGTCGCTACTA
GTCTTTTGGAGAGAGTCAGGACAACCGTTTTTCGAGAGAATACCGCCGTA
TTTAATTAAAGGGCTCATTTTTGTTTCCGGGTCAAAATTTCGTCGCAAGC
TTGTATATCTTATTTAGTGATAGATTACATTGTATGTATGTGAGGAACCA
TCTGACGCCACACGTCCCGGTACCTTGGGATTTCTCCTTACCCGCAGCGT
GGAGGTGCTATCTACCAGGAGAAATGGGGCACCTTTGTTTTCAACAGCTT
CGCAACGTTCGACGCGAACAGATGTATTGACGTGAGCACCGCGCTACGGC
AGCAGTTACCGCTGCAATCGCAAAGAAATTTTCTTATTCCTTTCAAGGAC
TTACACGCTACGGACATGTTAATCGTGGCGTCTTTTTGTCACGTACGGCA
GAGACAGCGATTTCACTATTTGTGTAGTAATTCTTTGTCGTTGGGAGCTT
CACAGCGCCTCGATTGTTATTGAATATTCGGAGGCATAATCGGGATAATA
GGTCCACCAGCACCCAAAAATTAAACATTCAAATGTTGCGTCTCTCACAT
CACTTTCCCAGAACTTCGCCCCAATGGTCTCGACGAATCCCCTTCCGTCT
ACTACTTTTCGTTTCTCTTTGGGCAGACCTATGGTGGGGGTGTGGCAAAC
TATGGCGGAACATTTGACTTCAAGGCAGGCAGCTCGTGGGTCAACCAGAT
CGGCGATAACTCCGGCGATGGTGGAACCGGTGGCGGTATCTACAACGAGA
ACGGCGGTGTCGTTACGTGAGTTGAGTCCGCGTCAGGAGCATCGAAGCCC
AGAACTAGTCTCGATCTATAGGAACTGTCTTCTTAATGATTCGCACTTCC
GATCGAAGAGTGTAGCCTACGGTGTAGAAGCCTCGTAGCACTTTTGCCCC
CTCTGCTCGAAGATGCTGTGGGAGGAGGCGGAATAATACCTTTGGCACGG
TCACTTGCTTGGCCCATGTTGTCTAGCGATCATTTCCACTACTACTCTCT
TCCCCAATCAATCAGCCAACCCGCAATCGAATACTGCACAACGTTAGGCT
CGAGGGGTCCACGGAGTTCAAGAACAACTACGCCCGCTGGGGTGGTGCCA
TTGCCAACAGGATCTATCCTTCCACTTACAGTGATGACTACAGCTCTGAT
ACCTACAAGGTTCCGATCATAACCTACCCTGATGACACGGTCTTCGAGGA
CAACGGCGACTTTGTGAGTCATACACGACGCCGAGTGTGGTAACACAGCA
TCATCAAGGGACGTGCTTAGTCCAATCCCTTGGGTACCTTTGTGATCATA
TCAAGCGTTGGTTCGCCCTAAACGAAAGCCAGACCTGGACTATTTCCTGT
GCCGCAGTTTTGCTTTGCTTCGTGACCGTCTGGTTGTTCTTCTCGATGAA
ACAGTCAACGAGCTTCAGGTTTCATGTGTTGTCGAAATCTTCGTTTGACC
CCAAAATCTTGAAGTAACATCCGCCCATTTCTACCGCTCTTTCTTACCTC
GCCCTTCCTCACGCGGCGTTGCTTTTATGTTGTTCTTGTTTTAAAACGTC
CTCAGGACTCGTACTGCCCTGATGTCATGTATGATTTCGACGAGGAAACA
TGTGGTCTCTAAAGAGGGATGTCGGCGGGTTCACCTGCCCATCCGACGGC
GTCTGCAAGCTAAAGATGGAAGCTATGAACCACATTGTGTCCGAACTTGA
ATTCTTCGTACGCGGTTAAAGCTATATAGCGCTACTAATTAGCCATCCCA
CATGAAATAATCGGCAAGTTCCAACTGTCTGACTCTGAAATAATGAACGT
CGTGGATCACGAAAGGGGCGATTGGGTGTAGTTTTTTTATTTGTTTTGTT
CGACTTCCTAGAATCCCATGAGCTATGATGAGAATCATATGAGCTATGAT
GAGAATCATCACTGAGTGTCGCCCCTGTTTTTATGAAGGTAGCCGGTCTA
GCGCGGGCAGCGGGCACTCTCTTGAGTTTTTATTTTATTTTGTGAACCAA
CATATATTATATATTATATCCTCTTCTTTGATATATCTGGTAATCACATA
AAGCAGACCAGATGTGGTTGCCACTTCTACTCGTTGTCAGCTGAACAAAG
AAAACATATTTTTCTTTGTGCCCGTTTGCGCCTGATAATTTGGTCTCGCG
AGACGGGTTCAGCTGTCCCGTCCCGCCTCAGCTCGCTCATTCTTCCTACC
CAGACTGAACATGGTGATTACTCTCGGGATCCTCTCGCTTCCCGCGACGG
CGTTTATCACCACCATCAACTGCTACTGAATCAACCCCAAGTTTATCAGG
TCACGCCATTGCGTACAGAAGGCGTTCACTACCGAAAGTGCGCAAGCACT
GAGCCAGCAGTCCTCCAGGTAGCTTGAGTAACTATTAATATTATTAGTGC
GGCTTATTCACGTAACCCCATTGACCAATTATTATGCCCCTCTCTTTTCC
CACACCCACTTTTGGTGCAGGATACAGTACAGTATCGGAGGCTATAATAT
TTCAATCGTATGCTTCCTTTGCTCGTCTTATGGATAATCATTGTCTGACC
ACATAATATATTTTACTTATAATGGCCTACATAACCGTGGAAAGATTATT
TTAATAATAATGAAGGAGAGCCCTGAAGAGTCGAAAATTGATGCAAGAAC
GTTATAGATAAAATTGCAGGCATTTACTACGTGTTTTTGGAACAAAAAAT
TTATGCGATCAAATCTTACGAATACGGCGCGATAAGCTACCAATCGACAG
GGATAAGTTGACGTGACTTTAAAACAGTTTTCTGGAGTAGCGAAGTAGGT
TTCTGACCTGGGAGATAATCGAGCAAACCTCCAAATGTTCCCCTAGGTCA
TACGTAACCACCAACCGGATGCTGGATTTTGAAGAAAAACTCAAGCAAAT
GAGTACAGGCCAACTTGCTGTCGCGATAAGCTACCAATCGACAGGGATAA
GTTGACGTGACTTTAAAACAGTTTTCTGGAGTAGCGAAGTAGGTTTCTGA
C
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Coding sequence (CDS) from alignment at H-elongata_contig19141:31..4731-

>mRNA_H-elongata_contig19141.5293.1 ID=mRNA_H-elongata_contig19141.5293.1|Name=mRNA_H-elongata_contig19141.5293.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1680bp|location=Sequence derived from alignment at H-elongata_contig19141:31..4731- (Himanthalia elongata Himel1 dioecious)
ATGAAGCTAGAGCTTGGAGCCGTTGGTGTGTTCGAGGGAACGGCCACTTT
CCACGACAACTCGATCATCTCCACCCTCCTAGATTCAGATGCCGCCCCAT
GGACAAGCGGCGAGATTAAACGCAAGGGCGGTGCGATTCACAATAAGATG
AAGCTAGAGCTTGGAGCCGTTGGTGTGTTCGAGGGAACGGCCACTTTCCA
CGACAACTCGATCATCTCCACCCTCCTAGATTCAGATGCCGCCCCATGGA
CAAGCGGCGAGATTAAACGCAAGGGCGGTGCGATTCACAATAAGGGTGAT
CTCACCTTCGAGAAGGACGCCGTCTTCACTAATAACCTTAACGACAGGGA
GGAGTACGGCTCTGGACCAGGAGGCGCCATTTCCAATCACGTCAAGGCAA
CAATGACCTTTAAGGGCAGCCTCAACATGACAGAGAACACCGCTGATGGT
GATCTCACCTTCGAGAAGGACGCCGTCTTCACTAATAACCTTAACGACAG
GGAGGAGTACGGCTCTGGACCAGGAGGCGCCATTTCCAATCACGTCAAGG
CAACAATGACCTTTAAGGGCAGCCTCAACATGACAGAGAACACCGCTGAT
GACTACTACGGAGGTGCAGAGGGCGGGGCTTTCTTCAACCGCGGTGACGT
CGTTGTCGACGGGGAGGCGGTATTCAAGGATAACTTTGGCGGCGACTACT
ACGGAGGTGCAGAGGGCGGGGCTTTCTTCAACCGCGGTGACGTCGTTGTC
GACGGGGAGGCGGTATTCAAGGATAACTTTGGCGGCCGTGGAGGTGCTAT
CTACCAGGAGAAATGGGGCACCTTTGTTTTCAACAGCTTCGCAACGTTCG
ACGCGAACAGATGTATTGACCGTGGAGGTGCTATCTACCAGGAGAAATGG
GGCACCTTTGTTTTCAACAGCTTCGCAACGTTCGACGCGAACAGATGTAT
TGACACCTATGGTGGGGGTGTGGCAAACTATGGCGGAACATTTGACTTCA
AGGCAGGCAGCTCGTGGGTCAACCAGATCGGCGATAACTCCGGCGATGGT
GGAACCGGTGGCGGTATCTACAACGAGAACGGCGGTGTCGTTACACCTAT
GGTGGGGGTGTGGCAAACTATGGCGGAACATTTGACTTCAAGGCAGGCAG
CTCGTGGGTCAACCAGATCGGCGATAACTCCGGCGATGGTGGAACCGGTG
GCGGTATCTACAACGAGAACGGCGGTGTCGTTACGCTCGAGGGGTCCACG
GAGTTCAAGAACAACTACGCCCGCTGGGGTGGTGCCATTGCCAACAGGAT
CTATCCTTCCACTTACAGTGATGACTACAGCTCTGATACCTACAAGGTTC
CGATCATAACCTACCCTGATGACACGGTCTTCGAGGACAACGGCGACTTT
GCTCGAGGGGTCCACGGAGTTCAAGAACAACTACGCCCGCTGGGGTGGTG
CCATTGCCAACAGGATCTATCCTTCCACTTACAGTGATGACTACAGCTCT
GATACCTACAAGGTTCCGATCATAACCTACCCTGATGACACGGTCTTCGA
GGACAACGGCGACTTTGACTCGTACTGCCCTGATGTCATGTATGATTTCG
ACGAGGAAACATGTGGTCTCTAAGACTCGTACTGCCCTGATGTCATGTAT
GATTTCGACGAGGAAACATGTGGTCTCTAA
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