mRNA_H-elongata_contig19056.5259.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19056.5259.1
Unique NamemRNA_H-elongata_contig19056.5259.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: D8LQH7_ECTSI (Arginine-N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH7_ECTSI)

HSP 1 Score: 685 bits (1767), Expect = 8.920e-241
Identity = 349/464 (75.22%), Postives = 385/464 (82.97%), Query Frame = 1 
Query:    1 EMAWATHLA------------LAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGR--AVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E AWA+ LA            LAAV+AP+P+PGRCSNYARCINQV QEL+Y+ VWLRIPLV+PE ++P+L  +    + G+            +GK    G   AV DPWETWN +RV+CEHK CLSV LE+T DLP QS+L+RWVGEPVKAVIV TKVFLTN+KGFPTLSRRHQDF TAMIKQKVQFVVKGRS HASGYLPYLQYLEHLRTRLP P+EHE FEAPY DYLQAPLQPL DNLESQTYEAFEKDPVKY QYERA+VKALELEK K +  D TVLMVVGAGRGPLVQA+LNAG  AGR LKVYAVEKN NAVITLRNRAIM  W NVTIV KDMR++ P+EKADILVSELLGSWGDNELSPECLDGAQRFLK+GGVSIPQEYTS+VAPMSSHKLWREV+NF ELKRLETAYVVKLHNFVQLA+EK CFTF HP+ ++  E +NKRHVEV FDV+QA
Sbjct:   90 ESAWASELAFKQEXXXXXXXALAAVIAPAPKPGRCSNYARCINQVAQELTYLAVWLRIPLVHPESLDPELNGTKGSAINGKGXXXXXXXX-XXVGKVSTGGGTGAVEDPWETWNAIRVMCEHKSCLSVVLEMTADLPAQSILDRWVGEPVKAVIVSTKVFLTNKKGFPTLSRRHQDFATAMIKQKVQFVVKGRSHHASGYLPYLQYLEHLRTRLPAPKEHENFEAPYLDYLQAPLQPLMDNLESQTYEAFEKDPVKYKQYERAIVKALELEK-KKEGIDTTVLMVVGAGRGPLVQAALNAGATAGRPLKVYAVEKNANAVITLRNRAIMDKWTNVTIVAKDMREFAPEEKADILVSELLGSWGDNELSPECLDGAQRFLKDGGVSIPQEYTSYVAPMSSHKLWREVSNFEELKRLETAYVVKLHNFVQLAEEKACFTFHHPSEEVGGEVHNKRHVEVDFDVEQA 551
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A6H5KR01_9PHAE (Protein arginine N-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR01_9PHAE)

HSP 1 Score: 676 bits (1743), Expect = 4.380e-238
Identity = 353/495 (71.31%), Postives = 386/495 (77.98%), Query Frame = 1 
Query:    1 EMAWATHLA------------LAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFG-------------------------------DADNGKWMGKKKERGRA--VGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E AWA+ LA            LAAV+AP+P+PGRCSNYARCINQV QEL+Y+ VWLRIPLV+PE ++P+L  +    + G+    G                                   G  +GK    GRA  V DPWETWN +RV+CEHK CLSV LE+T DLP QS+L+RWVGEPVKAVIV TKVFLTN+KGFPTLSRRHQDF TAMIKQKVQFVVKGRS HASGYLPYLQYLEHLRTRLP  +EHE FEAPY DYLQAPLQPL DNLESQTYEAFEKDPVKY QYERA+VKALELEK K +  D TVLMVVGAGRGPLVQA+LNAG  AGRALKVYAVEKN NAVITLRNRAIM  W NVTIV KDMR++ P+EKADILVSELLGSWGDNELSPECLDGAQRFLK GGVSIPQEYTS+VAPMSSHKLWREV+NF ELKRLETAYVVKLHNFVQLA+EK CFTF HPN ++  E +NKRHVEV FDV QA
Sbjct:   90 ESAWASELAFKQEXXXXXXXALAAVIAPAPKPGRCSNYARCINQVAQELTYLAVWLRIPLVHPESLDPELNGTKGSAINGKGRKSGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGDVGKGSTGGRAGAVEDPWETWNAIRVMCEHKSCLSVVLEMTADLPAQSILDRWVGEPVKAVIVSTKVFLTNKKGFPTLSRRHQDFATAMIKQKVQFVVKGRSHHASGYLPYLQYLEHLRTRLPALKEHENFEAPYLDYLQAPLQPLMDNLESQTYEAFEKDPVKYKQYERAIVKALELEK-KKEGVDTTVLMVVGAGRGPLVQAALNAGAKAGRALKVYAVEKNANAVITLRNRAIMDKWTNVTIVAKDMREFAPEEKADILVSELLGSWGDNELSPECLDGAQRFLKAGGVSIPQEYTSYVAPMSSHKLWREVSNFEELKRLETAYVVKLHNFVQLAEEKACFTFHHPNEEVGGEVHNKRHVEVDFDVGQA 583
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A836CBK3_9STRA (Protein arginine N-methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBK3_9STRA)

HSP 1 Score: 541 bits (1395), Expect = 3.170e-186
Identity = 278/461 (60.30%), Postives = 335/461 (72.67%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLF------GDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTR---LPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSE--TNNKRHVEVHFDVKQA 1350
            EMAW +HLALAAV+ P+PRPG  +NY+RC+NQV QEL Y+  W+RIP V+P+  +    D       G  VL       G A  G+ +   K  G  + DPWETW+ +R LCEH  CL+V LE+T DLP ++ L RW GE V+AVIV T +FLTN+KG+PTLSRRHQD +  +++ K+QFVVKGR RH  GYLPYLQYL+HLRTR    PP  E E FEAPY D+LQ+PLQPL DNLESQTYE FEKDPVKYSQY+ A+  AL           +T+LMVVGAGRGPLV+A+LNA   A R L++ AVEKN NAVITLRN AI   W NVTIV  DMR W+  EKA+ILVSELLGSWGDNELSPECLDGAQ +LK GG+SIP EYTS+VAPMSSHKLWR V +  E+KR+ET YVVKLHNF Q+AKE+PCF F HPN  +      +N+R+V + FDV+Q+
Sbjct:   98 EMAWVSHLALAAVMLPTPRPGAGANYSRCLNQVAQELGYVQAWVRIPTVWPQSEQVSCDD-------GSGVLHVINAGAGTAGGGEGI---KPAGAVLEDPWETWSRIRTLCEHLACLNVVLELTSDLPSEAALARWDGEQVRAVIVRTNIFLTNKKGYPTLSRRHQDLVMWLMRFKLQFVVKGRPRHPKGYLPYLQYLDHLRTRRQVTPPLHERETFEAPYLDFLQSPLQPLMDNLESQTYEVFEKDPVKYSQYQLAITAALLDTPEDKASGGVTLLMVVGAGRGPLVRAALNASREANRQLRIVAVEKNANAVITLRNLAITECWTNVTIVASDMRCWDAPEKANILVSELLGSWGDNELSPECLDGAQAYLKPGGISIPYEYTSFVAPMSSHKLWRAVESMGEVKRMETTYVVKLHNFCQMAKEQPCFIFEHPNVPLPGTGGIDNRRYVTLSFDVQQS 548
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A7S2Y265_9STRA (Protein arginine N-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y265_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 3.510e-169
Identity = 251/448 (56.03%), Postives = 321/448 (71.65%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSET-NNKRHVEVHFDV 1341
            E AWA+HL++ AVL P P    C NYA+ +NQV+   +Y+  W+++PL+  ++M P       L  +G E             K+K  G    + WE W+ +R +C+H   L+VALEIT DLPP++ LERW+GEPVKA+ +PT VFLTN+KG+PTLSRRHQ F+  + K K Q V++GR RH+ GYLPYLQY++HL+++L    EH+ FEAPY DYLQ PLQPL DNLESQTYE FEKDPVKY QYE+AV  AL      + +   +V+MVVGAGRGPLV+ASL A   A RA++++AVEKNPNAV+TLRN  +   W NVT+V  DMR+W+  E ADILVSELLGS+GDNELSPECLDGAQRFLK GG+SIP EYTS+ AP+SS KLW EV  + + K+ ETA+VVK+HNF Q A+ KPCFTF HPNP     T +N+R++ + FDV
Sbjct:    8 EFAWASHLSVPAVLCPPPDTA-CLNYAKLLNQVLSGATYLKAWVQVPLLRAQEMHP-------LPSSGHEET---------QAKRKAPGS---EQWEKWDRLRTVCQHNPNLAVALEITADLPPEAELERWLGEPVKAMFLPTSVFLTNKKGYPTLSRRHQAFIKNLYKFKAQIVLQGRPRHSGGYLPYLQYMDHLKSQLAQMTEHQRFEAPYLDYLQVPLQPLMDNLESQTYETFEKDPVKYDQYEKAVAAALG----DTPEDKTSVIMVVGAGRGPLVRASLRAATQASRAVRLFAVEKNPNAVVTLRNMVVAEQWANVTVVSTDMRKWQAPELADILVSELLGSFGDNELSPECLDGAQRFLKPGGISIPYEYTSYAAPISSSKLWNEVKAYADPKKFETAFVVKMHNFYQAAEAKPCFTFTHPNPGGPGGTIDNRRYISILFDV 431
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: W7T6F8_9STRA (Protein arginine N-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6F8_9STRA)

HSP 1 Score: 471 bits (1212), Expect = 1.390e-157
Identity = 260/505 (51.49%), Postives = 326/505 (64.55%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDL--------VVTGEEVLFGDADNGKWMGK---KKERGRAVGD-------------------------------------------PWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEG-GVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWA+HLA+ AVL P P    C+NYAR +NQV+ + + + +W+R+ L  P   +    DSD+         V   EE     +  G+ +G+   +KE  RA G+                                           PWETWN +R LCE K  L VALE+T DLP   VL+RW GEPVKA++ PT +FLTN+KG+P LS+ HQ F+  M + K+Q +++GR+RH  GY  YLQYLEHLR +L P  E + FE+PYYD+LQAPLQPL DNLESQTYE FEKDPVKY+QYE AV  AL +    +    +TV+MVVGAGRGPLV+ASL A   A R ++VYAVEKNPNAV+TLRN   M GW NVT+V  DMR W   EKADILVSELLGS+GDNELSPECLDGAQ FLK+G G+SIP +YTS++AP+SS KLW EV ++ +LK +ETAYVVKLHNF QLA  +PCFTF HPN    +  +N R+  + F    A
Sbjct:  100 ELAWASHLAVPAVLMPRPPRTECANYARLLNQVLSQPTMLQLWVRVSLSRPSVAD----DSDEXXXXXXXXXVQATEEDGSPRSSKGRDLGRVSFEKEASRAEGEFVGSACTSTCALGKAGGKRRRPGPQALPGPGLVPTGQVSPRENPWETWNRLRTLCEFKSSLGVALELTGDLPDPHVLQRWHGEPVKALVFPTAIFLTNKKGYPVLSKAHQAFVVDMYRFKIQVLLRGRTRHPGGYPVYLQYLEHLRLKLFPLPEQDRFESPYYDFLQAPLQPLMDNLESQTYETFEKDPVKYAQYEEAVAAALAV----TAPTTVTVIMVVGAGRGPLVRASLAAARRAHRDVRVYAVEKNPNAVVTLRNLVAMEGWTNVTVVATDMRTWVAPEKADILVSELLGSFGDNELSPECLDGAQAFLKDGSGISIPCQYTSYLAPISSSKLWNEVHSYKDLKHMETAYVVKLHNFCQLAPAQPCFTFAHPNRA--ARIDNTRYTCLRFPAPMA 594
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: L8H144_ACACA (Protein arginine Nmethyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H144_ACACA)

HSP 1 Score: 464 bits (1193), Expect = 5.760e-157
Identity = 245/451 (54.32%), Postives = 305/451 (67.63%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKE-GGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWATHL L AV+ P+PR    +NY+  IN V   LSYM  W++IPLV PE                                  E+     DPWE WN +R+L EH   + VALE+T DLP +  L+RW+GEPVKAVI+PT +FLTN+ G+PTLS++HQ F+  + + ++QF+V G   H  G   Y QY+  L  +  P  + E FEAPY+DYLQAPLQPL DNLESQTYE FE+DPVKY +YERA  +AL   K + KD++ TVLMVVGAGRGPLV  +L A   A R LKVYAV+KNPNAVITLRNR +  GWDNVT+V  DMR W   EKADILVSELLGS+GDNELSPECLDGAQ+FLKE GG+SIP  YTS++AP+SS KL+ EV  +N+ K  ETAYVVK HN  QLA+ KPCFTF HPN    +  +N R+ ++ + +++A
Sbjct:   86 EVAWATHLGLHAVMLPAPR-FHSTNYSHVINHVASNLSYMQAWVKIPLVAPES---------------------------------EQEARETDPWEWWNNLRLLAEHNSNMGVALELTADLPGEKALKRWLGEPVKAVILPTSIFLTNKLGYPTLSKKHQAFLCRLFRYRLQFIVTGSPHHKDGLSAYQQYIRFLHRKQSPLTDQEHFEAPYWDYLQAPLQPLMDNLESQTYETFERDPVKYREYERACFEAL---KKRGKDEE-TVLMVVGAGRGPLVAGALRAAKQAERKLKVYAVDKNPNAVITLRNRKVAEGWDNVTVVDTDMRVWNAPEKADILVSELLGSFGDNELSPECLDGAQKFLKEIGGISIPSAYTSYLAPLSSSKLYNEVKAYNDRKHFETAYVVKFHNTDQLAEAKPCFTFTHPNRA--ALIDNSRYTKLSWVIEEA 496
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A8K1FPQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPQ3_PYTOL)

HSP 1 Score: 454 bits (1168), Expect = 6.440e-152
Identity = 237/451 (52.55%), Postives = 300/451 (66.52%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASG-YLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWATHL++ AVL P+P P RC+NYAR +NQ   +  Y+  W+R+PL         L + D                             +  PWE WNT+R +C++   +SVALEIT DLP    L+RW+GEPV+AV++PT VFLTNRKG+PTLS+RHQ F   + K  +Q+ + GR RH  G +LPY+QYL  L ++ P      +FEAPY DYLQAPLQPL DNLESQTYE FE+D  KY QYE+A+VKAL       +DK+ +V+MVVGAGRGPLV+ +L A V A R  ++YAVEKNPNAVITLRN  I   WDNV I+  DMR W   EKADI+VSELLGS+GDNELSPECLDGAQ FLKE GVSIP +YTS++AP+ S KLW +V   + LK  ET YVV+LHN   +A  +PCF F HP  DI    +N+R +E+ F  +++
Sbjct:  101 EVAWATHLSVPAVLLPTPTP-RCANYARLVNQSATQAQYLQFWVRVPLTTRSRESVSLAEDDT--------------------------EDLPSPWEAWNTLRTMCQYHPKVSVALEITADLPSNEELQRWLGEPVRAVLIPTDVFLTNRKGYPTLSQRHQRFFLDLFKYNIQYYLTGRPRHGGGKFLPYVQYLHFLYSKRPGMDSKSLFEAPYLDYLQAPLQPLMDNLESQTYETFEQDNFKYDQYEKAIVKALAAT---PEDKE-SVVMVVGAGRGPLVRCALRAAVTANRKTRMYAVEKNPNAVITLRNLKISEKWDNVKIIASDMRHWAAHEKADIMVSELLGSFGDNELSPECLDGAQAFLKEDGVSIPCKYTSFMAPIMSSKLWNDVKALDGLKHFETPYVVRLHNIYSIAPSQPCFVFEHPKFDI-PRIDNRRFLEMTFTAEES 519
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A5D6XZJ6_9STRA (Protein arginine N-methyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZJ6_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 2.000e-148
Identity = 235/452 (51.99%), Postives = 299/452 (66.15%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPGRCS-NYARCINQVVQELSYMTVWLRIPLVYPEDMEP-DLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWA+HL++ AVL P+PR    S NYAR +NQ   +  Y+  W+RIPL Y        L      +   EE+   D D G               PWE WN +R  CE+   + VALEIT DLP    L+RW+GEP++AVI+PT +FLTNRKG+PTLS+RHQ F+  ++   VQF   GR RH  G+LPY+QYL  LR +  P     +FEAPY DYLQAPLQPL DNLESQTYE FE+D  KY+QYE+A+ +AL    + +  +  +V+MVVGAGRGPLV+ +L A   A R  +++AVEKNPNAV+TLRN  +   WDNVTI+  DMR W+  EKADI+VSELLGS+GDNELSPECLDGAQ FL E GVSIP  YTS VAP+ S KLW EV     LK  ET YVV+LHN   +A+ +PCFTF HP    H+  +N+R+ E+ F+ +++
Sbjct:  101 EVAWASHLSVPAVLLPTPRQHTSSANYARVLNQSATQAMYLQFWVRIPLSYRVGTGALKLPQGGPGLQHNEEISLDD-DPGV-------------SPWEAWNALRAKCEYSPKVHVALEITADLPSSEALKRWLGEPIRAVIIPTSIFLTNRKGYPTLSQRHQQFVLDLVGFNVQFYFAGRPRHRGGFLPYVQYLHFLRGKKDPMDPKALFEAPYLDYLQAPLQPLMDNLESQTYETFEQDAFKYNQYEKAIARAL----VATPPEKESVVMVVGAGRGPLVRCALRAAGTANRTTRMFAVEKNPNAVVTLRNLKLSERWDNVTIIASDMRYWKTHEKADIMVSELLGSFGDNELSPECLDGAQAFLHENGVSIPCAYTSHVAPIMSSKLWNEVKAHESLKNFETPYVVRLHNVYSIAEAQPCFTFTHPK--FHARIDNRRYAELAFEARES 532
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A3M6VDW7_9STRA (Protein arginine N-methyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDW7_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 6.210e-148
Identity = 234/451 (51.88%), Postives = 297/451 (65.85%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPG-RCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWA+HL++ AV+ P+PR     SNYAR +NQ + +  Y+  W+RIPL   +          D VV     +         M   +E      DPWE W+++R  CE+   L VALEIT DLP    ++RW+GEPVKA I+ T VFLTNRKG+P LS+RHQ  M  + + KVQF + GR RH    LPY+QYL  L ++ P       FEAPY DYLQAPLQPL DNLESQTYE FE+D  KY+QYE+A+ KALE       DK+ +V+MVVGAGRGPLV+ +L A + A R ++++AVEKN NAVITLRN  I   WDNV+IV  DMR W   E+ADI+VSELLGS+GDNELSPECLDGAQ FL+E G+SIP+ YTS+V P+ S KLW EV   + LK  ET YVV+LHNF  LA  + CF F HP   ++S  +N+R  E+HF   ++
Sbjct:   99 EVAWASHLSVPAVMLPTPRHATNSSNYARILNQTLTQAQYVQFWVRIPLTTRQQSSIKAPMEYDPVVGHHATIM--------METHEEXXXXSSDPWEAWDSLRARCEYHPKLHVALEITADLPSAEEIQRWLGEPVKAAIIATNVFLTNRKGYPALSQRHQTLMAQLFQHKVQFYLSGRPRHRGKILPYVQYLHFLYSKRPSQDRKAQFEAPYLDYLQAPLQPLMDNLESQTYETFEQDAFKYNQYEKAITKALEQTPA---DKE-SVVMVVGAGRGPLVRCALRAAIGANRKIRMFAVEKNANAVITLRNLKISEKWDNVSIVASDMRSWRTNERADIMVSELLGSFGDNELSPECLDGAQNFLQESGISIPRVYTSFVTPVMSSKLWNEVKVHDLLKSFETPYVVRLHNFYALAPTQSCFQFTHPK--LNSRIDNRRQAELHFTAAES 535
[Close]
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Match: A0A0N7L4E9_PLAHL (Protein arginine N-methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4E9_PLAHL)

HSP 1 Score: 444 bits (1141), Expect = 1.100e-147
Identity = 234/452 (51.77%), Postives = 299/452 (66.15%), Query Frame = 1 
Query:    1 EMAWATHLALAAVLAPSPRPG-RCSNYARCINQVVQELSYMTVWLRIPLVYPEDMEPDLGDSDDLVVTGEEVLFGDAD-NGKWMGKKKERGRAVGDPWETWNTVRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRKGFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLPPPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVVKALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEKNPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDNELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRLETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQA 1350
            E+AWA+HL++ AV+ PSPR     +NYAR +NQ + +  Y+  W+RIPL   + +           VT    L  +A   G  M   + +  A  DPW+TW+ +R  CE+   L VALEIT DLP    ++RW+GE VKA I+P  +FLTNRKGFPTLS+RHQ  M  + +  +QF + GR RH    LPY+QYL  L ++ P       FEAPY DYLQAPLQPL DNLESQTYE FE+D  KY+QYE+A+  AL     K+++   +V+MVVGAGRGPLV+++L A +AA R  +++AVEKNPNAVITLRN      WDNVTIV  DMR W   E+ADI+VSELLGS+GDNELSPECLDGAQ FL+E G+SIP EYTS+V P+ S KLW EV   + LK  ET YVV+LHNF  LA+ + CFTF HP    H   +N+R  E+ F   ++
Sbjct:   99 EVAWASHLSVRAVMLPSPRHVYNSANYARVLNQSLTQAQYLQFWVRIPLTTRQQLN----------VTASMELDSEAGLRGSAMKTDEGKEDAQIDPWDTWDALRARCEYHPKLHVALEITADLPSTEEIQRWLGESVKAAIIPMNIFLTNRKGFPTLSQRHQKLMAHLFQHNIQFYLSGRPRHRGKLLPYVQYLHFLYSKRPNLDRKAQFEAPYLDYLQAPLQPLMDNLESQTYETFEQDAFKYNQYEKAITLALA----KTREDKESVVMVVGAGRGPLVRSALRAALAANRKTRMFAVEKNPNAVITLRNLKTSEKWDNVTIVASDMRNWRTDERADIMVSELLGSFGDNELSPECLDGAQNFLQENGISIPCEYTSYVTPVMSSKLWNEVKVQDSLKSFETPYVVRLHNFYALARTQKCFTFTHPK--FHGRIDNRRQAELRFTTTES 534
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19056.5259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQH7_ECTSI8.920e-24175.22Arginine-N-methyltransferase n=1 Tax=Ectocarpus si... [more]
A0A6H5KR01_9PHAE4.380e-23871.31Protein arginine N-methyltransferase n=1 Tax=Ectoc... [more]
A0A836CBK3_9STRA3.170e-18660.30Protein arginine N-methyltransferase (Fragment) n=... [more]
A0A7S2Y265_9STRA3.510e-16956.03Protein arginine N-methyltransferase n=1 Tax=Fibro... [more]
W7T6F8_9STRA1.390e-15751.49Protein arginine N-methyltransferase n=3 Tax=Monod... [more]
L8H144_ACACA5.760e-15754.32Protein arginine Nmethyltransferase n=1 Tax=Acanth... [more]
A0A8K1FPQ3_PYTOL6.440e-15252.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XZJ6_9STRA2.000e-14851.99Protein arginine N-methyltransferase n=1 Tax=Pythi... [more]
A0A3M6VDW7_9STRA6.210e-14851.88Protein arginine N-methyltransferase n=2 Tax=Peron... [more]
A0A0N7L4E9_PLAHL1.100e-14751.77Protein arginine N-methyltransferase n=1 Tax=Plasm... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19056contigH-elongata_contig19056:1873..6742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score688.7
Seed ortholog evalue1.8e-195
Seed eggNOG ortholog2880.D8LQH7
Preferred namePRMT5
KEGG rclassRC00003,RC02120,RC03389,RC03391
KEGG koko:K02516
KEGG ReactionR11216,R11218,R11220
KEGG Pathwayko03013,ko04011,ko04111,map03013,map04011,map04111
GOsGO:0000003,GO:0000086,GO:0000122,GO:0000144,GO:0000166,GO:0000278,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000399,GO:0000578,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001775,GO:0001932,GO:0002039,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003712,GO:0003714,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005815,GO:0005816,GO:0005824,GO:0005829,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0005940,GO:0006139,GO:0006325,GO:0006351,GO:0006353,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006970,GO:0006974,GO:0006996,GO:0007028,GO:0007030,GO:0007049,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007318,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007399,GO:0007610,GO:0007623,GO:0007626,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008219,GO:0008276,GO:0008277,GO:0008283,GO:0008298,GO:0008327,GO:0008358,GO:0008360,GO:0008380,GO:0008469,GO:0008595,GO:0008630,GO:0008757,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009628,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009909,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010219,GO:0010220,GO:0010256,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0012501,GO:0012505,GO:0014013,GO:0014015,GO:0014070,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016273,GO:0016274,GO:0016277,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018130,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019918,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030163,GO:0030427,GO:0030518,GO:0030522,GO:0030719,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032153,GO:0032155,GO:0032156,GO:0032161,GO:0032173,GO:0032174,GO:0032259,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032870,GO:0032878,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033613,GO:0033993,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034709,GO:0034969,GO:0035075,GO:0035076,GO:0035097,GO:0035241,GO:0035243,GO:0035246,GO:0035247,GO:0035282,GO:0035556,GO:0036094,GO:0036211,GO:0036314,GO:0036315,GO:0040007,GO:0042054,GO:0042118,GO:0042221,GO:0042325,GO:0042802,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043408,GO:0043412,GO:0043414,GO:0043516,GO:0043518,GO:0043565,GO:0043933,GO:0043985,GO:0044020,GO:0044030,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044451,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044839,GO:0044877,GO:0045595,GO:0045596,GO:0045597,GO:0045685,GO:0045687,GO:0045745,GO:0045892,GO:0045934,GO:0046483,GO:0046982,GO:0046983,GO:0048468,GO:0048469,GO:0048477,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048599,GO:0048609,GO:0048699,GO:0048713,GO:0048714,GO:0048731,GO:0048831,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051286,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051962,GO:0060159,GO:0060161,GO:0060255,GO:0060284,GO:0061245,GO:0061246,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070372,GO:0070727,GO:0070887,GO:0070888,GO:0071214,GO:0071310,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071470,GO:0071495,GO:0071521,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0071963,GO:0072697,GO:0080090,GO:0080134,GO:0080135,GO:0090161,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097574,GO:0097575,GO:0097659,GO:0099568,GO:0099738,GO:0104004,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1901796,GO:1901797,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1903047,GO:1903359,GO:1903360,GO:1903506,GO:1903507,GO:1904990,GO:1904992,GO:1990234,GO:1990463,GO:1990778,GO:1990834,GO:1990837,GO:2000026,GO:2000099,GO:2000100,GO:2000112,GO:2000113,GO:2000241,GO:2000769,GO:2001020,GO:2001021,GO:2001141
EggNOG free text desc.peptidyl-arginine methylation, to symmetrical-dimethyl arginine
EggNOG OGsKOG0822@1,KOG0822@2759
EC2.1.1.320
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko03041
Hectar predicted targeting categorysignal peptide
Exons9
Model size1377
Cds size1374
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19056.5259.1prot_H-elongata_contig19056.5259.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19056 1876..6742 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930088.8453333-UTR-H-elongata_contig19056:1872..18751622930088.8453333-UTR-H-elongata_contig19056:1872..1875Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19056 1873..1875 +
1691679276.2650106-UTR-H-elongata_contig19056:1872..18751691679276.2650106-UTR-H-elongata_contig19056:1872..1875Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19056 1873..1875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930088.8613975-CDS-H-elongata_contig19056:1875..19681622930088.8613975-CDS-H-elongata_contig19056:1875..1968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 1876..1968 +
1691679276.2791202-CDS-H-elongata_contig19056:1875..19681691679276.2791202-CDS-H-elongata_contig19056:1875..1968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 1876..1968 +
1622930088.872375-CDS-H-elongata_contig19056:2370..24631622930088.872375-CDS-H-elongata_contig19056:2370..2463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 2371..2463 +
1691679276.2936833-CDS-H-elongata_contig19056:2370..24631691679276.2936833-CDS-H-elongata_contig19056:2370..2463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 2371..2463 +
1622930088.8833773-CDS-H-elongata_contig19056:2520..26631622930088.8833773-CDS-H-elongata_contig19056:2520..2663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 2521..2663 +
1691679276.3045003-CDS-H-elongata_contig19056:2520..26631691679276.3045003-CDS-H-elongata_contig19056:2520..2663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 2521..2663 +
1622930088.8995292-CDS-H-elongata_contig19056:3239..34131622930088.8995292-CDS-H-elongata_contig19056:3239..3413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3240..3413 +
1691679276.3136802-CDS-H-elongata_contig19056:3239..34131691679276.3136802-CDS-H-elongata_contig19056:3239..3413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3240..3413 +
1622930088.9218292-CDS-H-elongata_contig19056:3577..37141622930088.9218292-CDS-H-elongata_contig19056:3577..3714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3578..3714 +
1691679276.3219697-CDS-H-elongata_contig19056:3577..37141691679276.3219697-CDS-H-elongata_contig19056:3577..3714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3578..3714 +
1622930088.9419706-CDS-H-elongata_contig19056:3963..41301622930088.9419706-CDS-H-elongata_contig19056:3963..4130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3964..4130 +
1691679276.3327184-CDS-H-elongata_contig19056:3963..41301691679276.3327184-CDS-H-elongata_contig19056:3963..4130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 3964..4130 +
1622930088.9622617-CDS-H-elongata_contig19056:4663..48461622930088.9622617-CDS-H-elongata_contig19056:4663..4846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 4664..4846 +
1691679276.3447235-CDS-H-elongata_contig19056:4663..48461691679276.3447235-CDS-H-elongata_contig19056:4663..4846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 4664..4846 +
1622930088.977844-CDS-H-elongata_contig19056:5619..57871622930088.977844-CDS-H-elongata_contig19056:5619..5787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 5620..5787 +
1691679276.3534524-CDS-H-elongata_contig19056:5619..57871691679276.3534524-CDS-H-elongata_contig19056:5619..5787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 5620..5787 +
1622930088.9955068-CDS-H-elongata_contig19056:6526..67421622930088.9955068-CDS-H-elongata_contig19056:6526..6742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 6527..6742 +
1691679276.3629656-CDS-H-elongata_contig19056:6526..67421691679276.3629656-CDS-H-elongata_contig19056:6526..6742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19056 6527..6742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19056.5259.1

>prot_H-elongata_contig19056.5259.1 ID=prot_H-elongata_contig19056.5259.1|Name=mRNA_H-elongata_contig19056.5259.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=458bp
MAWATHLALAAVLAPSPRPGRCSNYARCINQVVQELSYMTVWLRIPLVYP
EDMEPDLGDSDDLVVTGEEVLFGDADNGKWMGKKKERGRAVGDPWETWNT
VRVLCEHKGCLSVALEITEDLPPQSVLERWVGEPVKAVIVPTKVFLTNRK
GFPTLSRRHQDFMTAMIKQKVQFVVKGRSRHASGYLPYLQYLEHLRTRLP
PPREHEVFEAPYYDYLQAPLQPLADNLESQTYEAFEKDPVKYSQYERAVV
KALELEKLKSKDKDITVLMVVGAGRGPLVQASLNAGVAAGRALKVYAVEK
NPNAVITLRNRAIMAGWDNVTIVGKDMRQWEPKEKADILVSELLGSWGDN
ELSPECLDGAQRFLKEGGVSIPQEYTSWVAPMSSHKLWREVANFNELKRL
ETAYVVKLHNFVQLAKEKPCFTFRHPNPDIHSETNNKRHVEVHFDVKQAR
AALRLID*
back to top

mRNA from alignment at H-elongata_contig19056:1873..6742+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19056.5259.1 ID=mRNA_H-elongata_contig19056.5259.1|Name=mRNA_H-elongata_contig19056.5259.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4870bp|location=Sequence derived from alignment at H-elongata_contig19056:1873..6742+ (Himanthalia elongata Himel1 dioecious)
GAGATGGCCTGGGCGACTCACCTCGCCCTGGCGGCCGTCTTGGCCCCCTC
TCCCAGGCCAGGCAGGTGTTCCAACTATGCGAGGTGCATCAATCAGGTAT
CAGGTATCAGGTAGGGTAGGTATCACGGTAGGGTAGGGTAGTGTAGCAAA
GCGTTGTTCAATAGGAGCAGCAGCGTCGTCGAGAAGCCCAAGCGCCGAAT
CGTTTCCTGGCTCCCGAATTTCCCTCATTTCCACGTGAAGCACGTCTGTG
TCTGAAGCGATTCTTCGTCCCGCCCGCCTTATCTTACGATACCTTTGTCT
GCCCTGAAATTGTACTTATTTTAAAGTTTAATAACTGGCTGTAACGGCTC
TTGATCGCCCAAAAGTAACAACCATTGCAGCACAACGAAGAGTAAAGTTG
GACGATTTTACCCGCTAAACGTTACGTTGCGTGTCACCTCTATAGAGTTG
TTCATCCCTGCATGGCCGATCTTCTACACCCGCTGCGGCCGTCTCCAGGT
AGTGCAGGAGCTGTCGTATATGACCGTATGGCTCAGGATCCCCCTCGTAT
ACCCGGAAGACATGGAGCCGGACCTTGGCGACAGTGATGATGTGGACGAT
CAAGTAGTTATGCGTGCTACGGAGGGCGATCGAGGCGCACAGGACCAGCT
GGTGGTCACGGGTGAAGAGGTGCTATTCGGCGATGCTGACAACGGGAAGT
GGATGGGGAAGAAAAAGGAGAGAGGGAGGGCCGTGGGAGACCCTTGGGAG
ACGTGGAACACTGTAAGGGTGCTATGCGAACACAAGGGCTGGTGAGCCTC
CCGCCTTGCCGCAAGCTTTGTCGTGAGTCTTTTGTGAGCCTTTCGTAAGG
TATCCCAAACCGGATAACAATGTTGGACAGTCACAACCGTGCCGTTGGTC
ATGCACCAGTAGTCTCGTACGAGGAGTAAGCGTCTTACAACCATCTGTGT
AAATCGGCTCGACCTTATCTGATGACCCCCCCAAACAAAATAGCTAGGGA
TGGGTGTGGGGCGGGGGAGGCTGGGCGCTTGGATGCTTTGGATCTGAGGT
TACACGACTGAGTGACATTGCGCGATGATTTATGTCTTGCCGAAGGCACT
CTCTACACTCTACCCAATGCTGGTGCTACGGATGATGGATGATGATTATG
GTAAATCGGGTAAAGCGGTCCTTGCGTTTGGAACGACTGAGGTCGCTTCG
ACACGTACTTCAATATAAGCATTTTTGGTTTGCGTTGCAAGCTCTACAAC
GTGTAAGATCGGCAATAATGTCACAACCACGGTTACCCTAGGCCTCAACA
CAAAGCGGGATTGGTCGTCGCCGAACCCTCGTTGTATTCCTTCCTCTCGT
CCATCCCGACGCGACAGTCTATCCGTGGCGCTGGAGATTACGGAAGATCT
CCCTCCTCAGAGCGTGCTGGAGCGCTGGGTGGGGGAGCCGGTGAAGGCGG
TGATCGTGCCCACGAAGGTTTTCCTCACGAACAGGAAGGGATTCCCCACG
CTCTCCCGTCGCCACCAGGACTTCATGACGGCAATGATCAAGTGAGAAAA
TCTCGATGCAAATATATTTTCAATCGTTATTATATACTGTATGTATTATA
ATATTGGACGAGTGTTGTATCGATCTGTTCGCGTGTCCCAATGTTTTTAG
AACAGAACGCTCAGCGGTGGCCCGTGGACTCGCCTCTGCAACCCCGCGTT
CCCAGGCAGAAGGTGCAGTTTGTGGTAAAGGGACGCTCCCGCCACGCCAG
TGGCTACCTCCCGTACCTACAGTATCTAGAACACCTACGGACGAGGCTGC
CTCCCCCGAGAGAGCACGAGGTGTTCGAGGCCCCCTACTACGGTGAGAGA
ACGCTTGGACCTCATTTCGCTTGCTTTTTGGGTGTATTTCATAGGCGGAG
ATGGTGGTCCCTGGCTTGGCAGCTCATCAAATGGATTACAGTAGTGGATT
GATGTGTAGCACCGGTGCTGCGCGGTGCAGATTCACGGTATGACGTGGCG
TGACCATGACGTGGTTTTGATCCATCAGTGAAGAGTTTTGTGCGTCTCCT
GCGCGCCCTTCGTCTTCCCCTTGTTGCGAGGGCGCGTCAAGACTATCTAC
AGGCTCCGCTACAGCCCTTGGCTGATAATCTGGAGTCGCAGACATACGAG
GCGTTCGAGAAGGACCCGGTTAAGTACTCCCAGTACGAGAGGGCCGTGGT
GAAGGCGCTCGAGCTCGAGAAGCTGAAGTCGAAAGACAAGGACATCACCG
TTCTCATGGTGGGTCCCCTCCGGAGGATTGCACCAGTCGCGGTGCGTGGT
AATGTGTAACAGCGCCCTTACCAGGGGACGCGTAACATCGACCCCCAGGT
ATGGTATGTTTGATGGTTATCTCTACAATTCCCATTTTGGTTTGAGCTAA
TGTACCGGCTGTGGTATTATCTCTACCATCCCGACGCAAGGAAGCAAGGG
GACAAGCCGCACCAGCGCTTTGTTTGTTTGTTTTCAGAAGATCTTGCTAT
TTTTAACGACCTTTGTGCCAGCCTGCGGAAGCTTGGCGTCACCTTTGCCT
CCCTCCCGTGCCTAAGTATCGAGGAAATTTGAAAGGATAGGGCTGAAAGG
ATAGGGCCTCATTCCCAAAGTGTGGCATAGAGCTACACACCACCACTATG
CGATTTCGCTTACCACTGATGCCTCTTGATGCTTCTTGGTGGCTCTTGTT
TGATCTACAGTAGAGCACAGCACGAGGGGGTCGCTGATCTCTTCACGTGG
ACTAATTGCCATCTGCCCCCCGTGCCCCCGACCCTGCCAAGGTGGTCGGT
GCTGGCCGAGGGCCGCTAGTACAGGCGTCTCTTAACGCCGGGGTTGCCGC
GGGGCGCGCGCTGAAGGTGTACGCCGTCGAGAAGAATCCCAACGCGGTGA
TAACCTTGAGGAACCGCGCCATTATGGCCGGCTGGGACAACGTTACCATC
GTGGGGAAGGACATGCGTCAATGGGTGAGACCAGATGTTGCCACGGTTGG
TGTTGCCTTTAGTCAGTATTATACAATATAGTATAGTATATTATAGTATA
GTATAGTCTAGTCTAGTATATTACAGTATAGTATATTCCTCTTAAAAACC
GTGAGGGTCGTATCCTACTATATATATTTGTCTGGAGCCTATTCTATTTA
CAAAAACTAGTCTCACCTTCTTGCGATGAGATGAGATGAGATGAGATAAG
CCTTTCTTTCAACTCGACGTGTTAGGTTCTCAATCCCACCTGTAGCATGA
CCCCAATGGAGGATCGATGGATGGATAAAGGGGTCGATATCCCAATCTCT
CCCCGGCATATGATATCCTACCCTACACTTTTTTTAACGTGATGGAAGTT
CCTGCATGTCGTCAACCAATGGTTAACCTTTGTTTGTTCCCGTTTCAACC
TTTTTCCGCGACTCATATTAAATGCAAGATTATTTTTTTACCGAGTTGTG
TAAGCGACGCTACTGTCATATGTGATATCTTTTAGGCTATTAATAGTAAG
GTAGTAATAAAGTACTATTAATAGTAATATCAAAAGTACTATTAATAGTA
ATATCAATACTGCTACCGTATACCAGGTATCAATTGATACAGTCAAAATT
ATCAAAATGGTGGTGTGTTGTGGAAGTCGCGTGAATCACACTTGAACACT
TGAACACTTGAACACTTGAACACTCTTTGTAGCTCTAGTGGAAGGTGGTT
CTGTTTTTGCCTTTACCGGTACGCGCGACGCCGGCTTGAACGAACAGGAA
CCAAAGGAAAAGGCCGATATTCTCGTCTCGGAGCTCCTGGGATCTTGGGG
GGACAACGAGCTCTCACCCGAATGCTTGGACGGCGCGCAGCGATTTCTCA
AAGAGGGAGGCGTTTCCATCCCACAGGAGTACACCTCGTGGGTCGCTCCC
ATGTCCAGTCACAAGGTGCGCAAGGCTTGATGACGCCTCAATCAGAGGAT
CCAATCAGAAGAAACTCGGGAAGAGGACCAAGTTCCGCCCTTGTGCGCTT
AGTAGATATGTAGTTGTTGTTTTTTAACGGTGTTAGGTAAGCCGTTAGTA
CAGCTGAACTGATTGTTGCTGTTGCGTCTTGGTCGGCCGATTTTTAATAC
CGATTTATTATACTCATTTTTGTCCGTTCGCTAAAGAGGGAGCAGGAGCA
GTCGGAGAGACATCGATCGTAGTCAATCAGTCCCACTAAGTAGTATAGTA
TAGTCAGGCACAGTGCGATCCATAATGGATAATAGTATAGTATATAATAA
TAATAATAATAATAATAATAATAATTTCCGCACATAAATCCGATATCTCG
AGCCCGTGGTCACAGACGTAGGCTTCCCTTTCCATACCATCGCTACATCC
AAAAAACAAATAAAACAAATGAAATATCTAACCCTAACCCTAACCCTAGT
ATACTAGTATATTGCATTATGATATAGTCCGGTACGATGTCCAGGCCGCT
TTGCCCTTCCACTGCTCAATGCCGTGTTGGACGGGGCGTTCGACTTGGTA
AATGGTAAATATAAGAGAGAACTAACGGAGAAATAAAAATCCGCAAAAAA
TCCGCAAAAAACACGATGAAAACCTCCCATAAAAACTCAAACAAACGCGA
GAGGTGGTTGGTGGTAGGTGTTCATATATTTAATTTCTCCATTCGATGCT
TCAGCTGTGGCGAGAAGTGGCCAACTTCAACGAGCTGAAGCGACTAGAGA
CGGCGTACGTGGTGAAGCTCCACAACTTCGTGCAGTTGGCGAAGGAGAAA
CCATGCTTCACGTTCCGACATCCTAACCCCGACATACACTCGGAGACAAA
CAACAAGAGACATGTCGAGGTCCACTTCGACGTCAAACAGGCAAGAGCGG
CTCTTCGATTGATTGATTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig19056:1873..6742+

>mRNA_H-elongata_contig19056.5259.1 ID=mRNA_H-elongata_contig19056.5259.1|Name=mRNA_H-elongata_contig19056.5259.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2748bp|location=Sequence derived from alignment at H-elongata_contig19056:1873..6742+ (Himanthalia elongata Himel1 dioecious)
ATGGCCTGGGCGACTCACCTCGCCCTGGCGGCCGTCTTGGCCCCCTCTCC
CAGGCCAGGCAGGTGTTCCAACTATGCGAGGTGCATCAATCAGATGGCCT
GGGCGACTCACCTCGCCCTGGCGGCCGTCTTGGCCCCCTCTCCCAGGCCA
GGCAGGTGTTCCAACTATGCGAGGTGCATCAATCAGGTAGTGCAGGAGCT
GTCGTATATGACCGTATGGCTCAGGATCCCCCTCGTATACCCGGAAGACA
TGGAGCCGGACCTTGGCGACAGTGATGATGTAGTGCAGGAGCTGTCGTAT
ATGACCGTATGGCTCAGGATCCCCCTCGTATACCCGGAAGACATGGAGCC
GGACCTTGGCGACAGTGATGATCTGGTGGTCACGGGTGAAGAGGTGCTAT
TCGGCGATGCTGACAACGGGAAGTGGATGGGGAAGAAAAAGGAGAGAGGG
AGGGCCGTGGGAGACCCTTGGGAGACGTGGAACACTGTAAGGGTGCTATG
CGAACACAAGGGCTGCTGGTGGTCACGGGTGAAGAGGTGCTATTCGGCGA
TGCTGACAACGGGAAGTGGATGGGGAAGAAAAAGGAGAGAGGGAGGGCCG
TGGGAGACCCTTGGGAGACGTGGAACACTGTAAGGGTGCTATGCGAACAC
AAGGGCTGTCTATCCGTGGCGCTGGAGATTACGGAAGATCTCCCTCCTCA
GAGCGTGCTGGAGCGCTGGGTGGGGGAGCCGGTGAAGGCGGTGATCGTGC
CCACGAAGGTTTTCCTCACGAACAGGAAGGGATTCCCCACGCTCTCCCGT
CGCCACCAGGACTTCATGACGGCAATGATCAATCTATCCGTGGCGCTGGA
GATTACGGAAGATCTCCCTCCTCAGAGCGTGCTGGAGCGCTGGGTGGGGG
AGCCGGTGAAGGCGGTGATCGTGCCCACGAAGGTTTTCCTCACGAACAGG
AAGGGATTCCCCACGCTCTCCCGTCGCCACCAGGACTTCATGACGGCAAT
GATCAAGCAGAAGGTGCAGTTTGTGGTAAAGGGACGCTCCCGCCACGCCA
GTGGCTACCTCCCGTACCTACAGTATCTAGAACACCTACGGACGAGGCTG
CCTCCCCCGAGAGAGCACGAGGTGTTCGAGGCCCCCTACTACGGCAGAAG
GTGCAGTTTGTGGTAAAGGGACGCTCCCGCCACGCCAGTGGCTACCTCCC
GTACCTACAGTATCTAGAACACCTACGGACGAGGCTGCCTCCCCCGAGAG
AGCACGAGGTGTTCGAGGCCCCCTACTACGACTATCTACAGGCTCCGCTA
CAGCCCTTGGCTGATAATCTGGAGTCGCAGACATACGAGGCGTTCGAGAA
GGACCCGGTTAAGTACTCCCAGTACGAGAGGGCCGTGGTGAAGGCGCTCG
AGCTCGAGAAGCTGAAGTCGAAAGACAAGGACATCACCGTTCTCATGACT
ATCTACAGGCTCCGCTACAGCCCTTGGCTGATAATCTGGAGTCGCAGACA
TACGAGGCGTTCGAGAAGGACCCGGTTAAGTACTCCCAGTACGAGAGGGC
CGTGGTGAAGGCGCTCGAGCTCGAGAAGCTGAAGTCGAAAGACAAGGACA
TCACCGTTCTCATGGTGGTCGGTGCTGGCCGAGGGCCGCTAGTACAGGCG
TCTCTTAACGCCGGGGTTGCCGCGGGGCGCGCGCTGAAGGTGTACGCCGT
CGAGAAGAATCCCAACGCGGTGATAACCTTGAGGAACCGCGCCATTATGG
CCGGCTGGGACAACGTTACCATCGTGGGGAAGGACATGCGTCAATGGGTG
GTCGGTGCTGGCCGAGGGCCGCTAGTACAGGCGTCTCTTAACGCCGGGGT
TGCCGCGGGGCGCGCGCTGAAGGTGTACGCCGTCGAGAAGAATCCCAACG
CGGTGATAACCTTGAGGAACCGCGCCATTATGGCCGGCTGGGACAACGTT
ACCATCGTGGGGAAGGACATGCGTCAATGGGAACCAAAGGAAAAGGCCGA
TATTCTCGTCTCGGAGCTCCTGGGATCTTGGGGGGACAACGAGCTCTCAC
CCGAATGCTTGGACGGCGCGCAGCGATTTCTCAAAGAGGGAGGCGTTTCC
ATCCCACAGGAGTACACCTCGTGGGTCGCTCCCATGTCCAGTCACAAGGA
ACCAAAGGAAAAGGCCGATATTCTCGTCTCGGAGCTCCTGGGATCTTGGG
GGGACAACGAGCTCTCACCCGAATGCTTGGACGGCGCGCAGCGATTTCTC
AAAGAGGGAGGCGTTTCCATCCCACAGGAGTACACCTCGTGGGTCGCTCC
CATGTCCAGTCACAAGCTGTGGCGAGAAGTGGCCAACTTCAACGAGCTGA
AGCGACTAGAGACGGCGTACGTGGTGAAGCTCCACAACTTCGTGCAGTTG
GCGAAGGAGAAACCATGCTTCACGTTCCGACATCCTAACCCCGACATACA
CTCGGAGACAAACAACAAGAGACATGTCGAGGTCCACTTCGACGTCAAAC
AGGCAAGAGCGGCTCTTCGATTGATTGATTGACTGTGGCGAGAAGTGGCC
AACTTCAACGAGCTGAAGCGACTAGAGACGGCGTACGTGGTGAAGCTCCA
CAACTTCGTGCAGTTGGCGAAGGAGAAACCATGCTTCACGTTCCGACATC
CTAACCCCGACATACACTCGGAGACAAACAACAAGAGACATGTCGAGGTC
CACTTCGACGTCAAACAGGCAAGAGCGGCTCTTCGATTGATTGATTGA
back to top