mRNA_H-elongata_contig189817.5229.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig189817.5229.1
Unique NamemRNA_H-elongata_contig189817.5229.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A7S6U9V6_9STRA (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V6_9STRA)

HSP 1 Score: 595 bits (1535), Expect = 3.680e-215
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLMLQV 888
            MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLMLQV
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLMLQV 296
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BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A141BSG9_9PHAE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=56 Tax=Phaeophyceae TaxID=2870 RepID=A0A141BSG9_9PHAE)

HSP 1 Score: 534 bits (1376), Expect = 6.340e-191
Identity = 261/296 (88.18%), Postives = 277/296 (93.58%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLMLQV 888
            MKLAVYGKGGIGKSTTSCNISVALCRRGK VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYED+WPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTA+RDLIDKYI+ V MPVLEVLPLIEDIRVSRVKGKTLFEMTE D+SL+Y+CEYYLNIADQLIANPEGV+PKEAADRELFSLLSDFYLNP +D+  L   + + L  + + +  V
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKSVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTATRDLIDKYINVVTMPVLEVLPLIEDIRVSRVKGKTLFEMTEIDNSLSYICEYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTQDKTSLSEFDDSTLENDLNEVFSV 296
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: CHLL_PORPU (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=14 Tax=Bangiaceae TaxID=31345 RepID=CHLL_PORPU)

HSP 1 Score: 529 bits (1362), Expect = 6.910e-189
Identity = 262/294 (89.12%), Postives = 274/294 (93.20%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLML 882
            MKLAVYGKGGIGKSTTSCNISVAL +RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYEDVWPEDVIY+GYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGL+GNRT  RDLIDKYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM ESD +L YVC+YYLNIADQLIA PEGV+PKEAADRELFSLLSDFYLNPK      +T+++    EE DLM+
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLVGNRTDKRDLIDKYIDCVPMPVLEVLPLIEDIRVSRVKGKTLFEMAESDTNLAYVCDYYLNIADQLIARPEGVVPKEAADRELFSLLSDFYLNPKS-----NTTKSTADEEELDLMM 289
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A8E5XRD2_9PHAE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD2_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 1.180e-187
Identity = 262/291 (90.03%), Postives = 274/291 (94.16%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFD 873
            MKLAVYGKGGIGKSTTSCNISVAL RRGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYEDVWPEDVIYQGYG VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTA+RDLIDKY+DAVPMPVLEVLPLIEDIRVSRVKGKTLFEM+E ++SL YVCEYYLNIADQLIANPEGV+PKEAADRELFSLLSDFYLNP +D+      E    ++E D
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYQGYGDVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTATRDLIDKYVDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMSELNNSLTYVCEYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTDDDKNDQLFELEQFNDEED 291
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BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A3G1I8T1_9FLOR (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=4 Tax=Batrachospermaceae TaxID=31371 RepID=A0A3G1I8T1_9FLOR)

HSP 1 Score: 524 bits (1350), Expect = 4.660e-187
Identity = 253/276 (91.67%), Postives = 267/276 (96.74%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDEN 828
            MKLAVYGKGGIGKSTTSCNISVAL +RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYEDVWPEDVIY+GYG VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTHSL+LAGLIGNRT+ RDLIDKYID+VPMP+LEVLPLIEDIR+SRVKGKTLFEMTE D +L YVC+YYLNIADQLIA PEG+IPKE+ADRELFSLLSDFYLNPK  EN
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGYGDVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLKLAGLIGNRTSKRDLIDKYIDSVPMPILEVLPLIEDIRISRVKGKTLFEMTEKDKNLTYVCDYYLNIADQLIAKPEGIIPKESADRELFSLLSDFYLNPKTSEN 276
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BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A0K2RWK0_9STRA (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A0K2RWK0_9STRA)

HSP 1 Score: 524 bits (1349), Expect = 7.120e-187
Identity = 255/271 (94.10%), Postives = 265/271 (97.79%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNP 813
            MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRI+ASVREKARTHSLRLAGLIGNRTA+RDLIDKYI AVPMPVLEVLPLIEDIR+SRVKGKTLFEM + + SL+YVC+YYLNIADQLIA PEGVIPKE+ DRELFSLLSDFYLNP
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRISASVREKARTHSLRLAGLIGNRTATRDLIDKYITAVPMPVLEVLPLIEDIRISRVKGKTLFEMADIEPSLSYVCDYYLNIADQLIAEPEGVIPKESPDRELFSLLSDFYLNP 271
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: CHLL_LEPBY (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=33 Tax=Cyanobacteria TaxID=1117 RepID=CHLL_LEPBY)

HSP 1 Score: 523 bits (1347), Expect = 1.150e-186
Identity = 258/294 (87.76%), Postives = 276/294 (93.88%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLML 882
            MKLAVYGKGGIGKSTTSCNISVAL +RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYEDVW EDVIY+GYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYC+I+TDNGFDALFAANRIAASVREKARTH LRLAGLIGNRTA RDLI+KY+DAVPMP+LEVLPLIEDIRVSRVKGKTLFEM ESD SLNYVC+YYLNIADQ++ANPEGV+PK+AADR+LFSLLSDFYLNP++ +    T+E     EE DLM+
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQEKDYHYEDVWAEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCMIVTDNGFDALFAANRIAASVREKARTHPLRLAGLIGNRTAKRDLIEKYVDAVPMPILEVLPLIEDIRVSRVKGKTLFEMAESDPSLNYVCDYYLNIADQILANPEGVVPKDAADRDLFSLLSDFYLNPQQPK----TAE-----EELDLMM 285
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: B7T1Z8_VAULI (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Z8_VAULI)

HSP 1 Score: 522 bits (1345), Expect = 2.690e-186
Identity = 255/271 (94.10%), Postives = 264/271 (97.42%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNP 813
            MKLAVYGKGGIGKSTTSCNISVAL RRGKK+LQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYEDVWPEDVIY+GYG VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTH+LRLAGLIGNRT++RDLI+KYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM E D+SL YVC+YYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNP
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSRRGKKILQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYKGYGAVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHTLRLAGLIGNRTSTRDLINKYIDTVPMPVLEVLPLIEDIRVSRVKGKTLFEMAEFDNSLEYVCDYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNP 271
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: A0A1G4NWT5_9FLOR (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A1G4NWT5_9FLOR)

HSP 1 Score: 521 bits (1342), Expect = 7.430e-186
Identity = 252/277 (90.97%), Postives = 267/277 (96.39%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENL 831
            MKLAVYGKGGIGKSTTSCNISVAL +RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYEDVWPEDVIYQGY GVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASV+EKARTHSLRLAGLIGNRTA RDLIDKYI++VPMPVLEVLPLIEDIR+SRVKGKTLFEM   D  L+YVC+YYLNIADQLIA PEG++PKEAADRELFSLLSDFYLNP E++++
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYQGYAGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVKEKARTHSLRLAGLIGNRTAKRDLIDKYINSVPMPVLEVLPLIEDIRISRVKGKTLFEMASEDKELSYVCDYYLNIADQLIAKPEGIVPKEAADRELFSLLSDFYLNPAENDSI 277
[Close]
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Match: CHLL_NEOYE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=10 Tax=Rhodophyta TaxID=2763 RepID=CHLL_NEOYE)

HSP 1 Score: 520 bits (1339), Expect = 2.210e-185
Identity = 257/294 (87.41%), Postives = 268/294 (91.16%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLML 882
            MKLAVYGKGGIGKSTTSCNISVAL +RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYEDVWPEDVIY+GYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGL+GNRT  RDLIDKYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM E D  L YVC+YYLNIADQLI  PEGV+PKE+ DRELFSLLSDFYLNPK         +  +  EE DLM+
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLVGNRTDKRDLIDKYIDCVPMPVLEVLPLIEDIRVSRVKGKTLFEMAEIDKDLAYVCDYYLNIADQLITRPEGVVPKESPDRELFSLLSDFYLNPKS-----KVGQEKVDQEELDLMI 289
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189817.5229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6U9V6_9STRA3.680e-215100.00Light-independent protochlorophyllide reductase ir... [more]
A0A141BSG9_9PHAE6.340e-19188.18Light-independent protochlorophyllide reductase ir... [more]
CHLL_PORPU6.910e-18989.12Light-independent protochlorophyllide reductase ir... [more]
A0A8E5XRD2_9PHAE1.180e-18790.03Light-independent protochlorophyllide reductase ir... [more]
A0A3G1I8T1_9FLOR4.660e-18791.67Light-independent protochlorophyllide reductase ir... [more]
A0A0K2RWK0_9STRA7.120e-18794.10Light-independent protochlorophyllide reductase ir... [more]
CHLL_LEPBY1.150e-18687.76Light-independent protochlorophyllide reductase ir... [more]
B7T1Z8_VAULI2.690e-18694.10Light-independent protochlorophyllide reductase ir... [more]
A0A1G4NWT5_9FLOR7.430e-18690.97Light-independent protochlorophyllide reductase ir... [more]
CHLL_NEOYE2.210e-18587.41Light-independent protochlorophyllide reductase ir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189817contigH-elongata_contig189817:290..1180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score540.0
Seed ortholog evalue6.8e-151
Seed eggNOG ortholog2880.D1J7A6
Preferred namechlL
KEGG rclassRC01008
KEGG koko:K04037
KEGG ReactionR06282
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP
EggNOG OGs2QW4A@2759,COG1348@1
EC1.3.7.7
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size891
Cds size891
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930086.19148-CDS-H-elongata_contig189817:289..11801622930086.19148-CDS-H-elongata_contig189817:289..1180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig189817 290..1180 -
1691679275.0833414-CDS-H-elongata_contig189817:289..11801691679275.0833414-CDS-H-elongata_contig189817:289..1180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig189817 290..1180 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189817.5229.1prot_H-elongata_contig189817.5229.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig189817 290..1180 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig189817.5229.1

>prot_H-elongata_contig189817.5229.1 ID=prot_H-elongata_contig189817.5229.1|Name=mRNA_H-elongata_contig189817.5229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFL
IPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVV
GETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGF
DALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVL
EVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGV
IPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFDLMLQV*
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mRNA from alignment at H-elongata_contig189817:290..1180-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig189817.5229.1 ID=mRNA_H-elongata_contig189817.5229.1|Name=mRNA_H-elongata_contig189817.5229.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=891bp|location=Sequence derived from alignment at H-elongata_contig189817:290..1180- (Himanthalia elongata Himel1 dioecious)
ATGAAACTAGCTGTTTATGGAAAGGGTGGGATTGGTAAATCTACAACAAG
TTGTAATATTTCGGTAGCGCTGTGTCGACGAGGAAAAAAAGTATTGCAAA
TAGGATGTGATCCTAAACATGATAGTACCTTTACATTGACTGGATTTTTA
ATCCCAACAATTATTGATACATTACAAACAAAAGACTATCACTATGAAGA
TGTTTGGCCAGAAGATGTAATTTATCAGGGTTATGGTGGAGTTGATTGCG
TTGAAGCAGGTGGACCACCGGCAGGTGCCGGATGTGGAGGATATGTTGTA
GGCGAAACTGTAAAACTTTTAAAAGAATTAAATGCTTTTGATGAATATGA
TGTTATTTTATTTGATGTTTTAGGAGATGTGGTGTGTGGTGGATTTGCAG
CTCCACTAAATTATGCAGATTATTGTTTAATTATTACTGATAACGGCTTT
GATGCTTTATTTGCCGCTAATAGAATTGCAGCGTCAGTAAGAGAAAAGGC
CCGAACACATTCTTTACGACTTGCAGGTTTAATAGGCAATCGTACGGCCA
GTAGAGATTTAATTGATAAATACATTGATGCTGTGCCAATGCCAGTATTA
GAAGTTCTTCCTTTAATTGAAGATATTAGAGTTTCAAGAGTTAAAGGTAA
GACGTTATTTGAAATGACAGAATCTGATGATTCCTTAAATTATGTTTGTG
AATACTATTTAAATATTGCGGACCAATTAATTGCAAATCCTGAAGGAGTG
ATTCCAAAGGAAGCGGCAGATCGTGAGTTATTTAGTTTATTATCAGATTT
TTATTTAAATCCTAAAGAAGATGAAAATCTTTTACATACATCTGAAACAA
ATATATTAAGCGAGGAGTTTGATTTAATGTTACAAGTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig189817:290..1180-

>mRNA_H-elongata_contig189817.5229.1 ID=mRNA_H-elongata_contig189817.5229.1|Name=mRNA_H-elongata_contig189817.5229.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at H-elongata_contig189817:290..1180- (Himanthalia elongata Himel1 dioecious)
ATGAAACTAGCTGTTTATGGAAAGGGTGGGATTGGTAAATCTACAACAAG
TTGTAATATTTCGGTAGCGCTGTGTCGACGAGGAAAAAAAGTATTGCAAA
TAGGATGTGATCCTAAACATGATAGTACCTTTACATTGACTGGATTTTTA
ATCCCAACAATTATTGATACATTACAAACAAAAGACTATCACTATGAAGA
TGTTTGGCCAGAAGATGTAATTTATCAGGGTTATGGTGGAGTTGATTGCG
TTGAAGCAGGTGGACCACCGGCAGGTGCCGGATGTGGAGGATATGTTGTA
GGCGAAACTGTAAAACTTTTAAAAGAATTAAATGCTTTTGATGAATATGA
TGTTATTTTATTTGATGTTTTAGGAGATGTGGTGTGTGGTGGATTTGCAG
CTCCACTAAATTATGCAGATTATTGTTTAATTATTACTGATAACGGCTTT
GATGCTTTATTTGCCGCTAATAGAATTGCAGCGTCAGTAAGAGAAAAGGC
CCGAACACATTCTTTACGACTTGCAGGTTTAATAGGCAATCGTACGGCCA
GTAGAGATTTAATTGATAAATACATTGATGCTGTGCCAATGCCAGTATTA
GAAGTTCTTCCTTTAATTGAAGATATTAGAGTTTCAAGAGTTAAAGGTAA
GACGTTATTTGAAATGACAGAATCTGATGATTCCTTAAATTATGTTTGTG
AATACTATTTAAATATTGCGGACCAATTAATTGCAAATCCTGAAGGAGTG
ATTCCAAAGGAAGCGGCAGATCGTGAGTTATTTAGTTTATTATCAGATTT
TTATTTAAATCCTAAAGAAGATGAAAATCTTTTACATACATCTGAAACAA
ATATATTAAGCGAGGAGTTTGATTTAATGTTACAAGTGTAAATGAAACTA
GCTGTTTATGGAAAGGGTGGGATTGGTAAATCTACAACAAGTTGTAATAT
TTCGGTAGCGCTGTGTCGACGAGGAAAAAAAGTATTGCAAATAGGATGTG
ATCCTAAACATGATAGTACCTTTACATTGACTGGATTTTTAATCCCAACA
ATTATTGATACATTACAAACAAAAGACTATCACTATGAAGATGTTTGGCC
AGAAGATGTAATTTATCAGGGTTATGGTGGAGTTGATTGCGTTGAAGCAG
GTGGACCACCGGCAGGTGCCGGATGTGGAGGATATGTTGTAGGCGAAACT
GTAAAACTTTTAAAAGAATTAAATGCTTTTGATGAATATGATGTTATTTT
ATTTGATGTTTTAGGAGATGTGGTGTGTGGTGGATTTGCAGCTCCACTAA
ATTATGCAGATTATTGTTTAATTATTACTGATAACGGCTTTGATGCTTTA
TTTGCCGCTAATAGAATTGCAGCGTCAGTAAGAGAAAAGGCCCGAACACA
TTCTTTACGACTTGCAGGTTTAATAGGCAATCGTACGGCCAGTAGAGATT
TAATTGATAAATACATTGATGCTGTGCCAATGCCAGTATTAGAAGTTCTT
CCTTTAATTGAAGATATTAGAGTTTCAAGAGTTAAAGGTAAGACGTTATT
TGAAATGACAGAATCTGATGATTCCTTAAATTATGTTTGTGAATACTATT
TAAATATTGCGGACCAATTAATTGCAAATCCTGAAGGAGTGATTCCAAAG
GAAGCGGCAGATCGTGAGTTATTTAGTTTATTATCAGATTTTTATTTAAA
TCCTAAAGAAGATGAAAATCTTTTACATACATCTGAAACAAATATATTAA
GCGAGGAGTTTGATTTAATGTTACAAGTGTAA
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