mRNA_H-elongata_contig18943.5204.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18943.5204.1
Unique NamemRNA_H-elongata_contig18943.5204.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A6H5KBE8_9PHAE (Pyruvate dehydrogenase E1 component subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBE8_9PHAE)

HSP 1 Score: 706 bits (1821), Expect = 9.870e-250
Identity = 345/415 (83.13%), Postives = 378/415 (91.08%), Query Frame = 2 
Query:   38 MQRMMRAAVAPARRAAVQ--RPSGGMATA--RAMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPDRAKSFGNIMGDAVV 1270
            M R + AAVAP RRA +Q  RP  G+A A  RAMST+KQITVPFTK+IDTHNL + +PTEA T+REELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVA G+EAA +  DSWITSYRCHC ALARGGTVE++FAELFGFKEG+S+GKGGSMH+YNK H+FFGG GIVGAQVP+GTGLAFA KY+ PAGEDTPVA+AMYGDGAANQGQIWE++NMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPG KLDGMNVLM+REGFAF K+WCSKGNGP+Y+EVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDP+E VKNLLVDN LAEAQELK+IEKDIRKEVQEALK+AK GT PPDEELYSNIW+AGE YE PV P ++R+PDR+KS GNIM D VV
Sbjct:    1 MLRTLTAAVAPVRRAVLQQQRPGAGVAAAAARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPAYIRMPDRSKSVGNIMSDVVV 415
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A835Z5P4_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P4_9STRA)

HSP 1 Score: 599 bits (1545), Expect = 5.430e-208
Identity = 290/378 (76.72%), Postives = 327/378 (86.51%), Query Frame = 2 
Query:  119 RAMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPDRAKSFGNI 1252
            RAMS+   ITVPF++E DTH L   MP EAVT++EEL+ YFKLMYTMRRMEITCDTEYKAR IRGFCHLYDGQEAVA GVEAA    DSWITSYRCHC +L RGGTVE+IFAEL G+ EG+S GKGGSMH+Y+K HNF+GG GIVGAQVP+G GL+FA KYATP GE TPVA+AMYGDGAANQGQIWE +NMASLWKLPMI+CIENNQYGMGTSKERSSSN+ YYTMGNHIPG+++DGMNVLMVREG    KEWCS GNGP+YVE DTYRYHGHSMSDPGTTYRNRDEIASMRTARDP+E VKNLLV ++LA+ QELK IEKDIRKEVQ+ALK AK G++P  EELY +I+I GE+  K V P ++R+PDRAKS G+I
Sbjct:   24 RAMSSGS-ITVPFSREYDTHKLPFEMPKEAVTNKEELLGYFKLMYTMRRMEITCDTEYKARAIRGFCHLYDGQEAVAMGVEAAFDQKDSWITSYRCHCISLLRGGTVESIFAELLGYSEGVSHGKGGSMHMYSKKHNFYGGQGIVGAQVPVGVGLSFAAKYATPPGEKTPVAIAMYGDGAANQGQIWEGANMASLWKLPMIFCIENNQYGMGTSKERSSSNNKYYTMGNHIPGVRMDGMNVLMVREGMKAAKEWCSTGNGPIYVESDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEYVKNLLVQHNLADPQELKNIEKDIRKEVQDALKAAKNGSIPKFEELYKDIYIGGEDNSKIVYPAYIRMPDRAKSIGSI 400
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A4D9DDV1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDV1_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 2.780e-179
Identity = 255/376 (67.82%), Postives = 303/376 (80.59%), Query Frame = 2 
Query:  122 AMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWI---AGENYEKPVVPGFVRLPDRAKS 1240
            A S+D  ITV  +K  DTHNL    PT A  ++EEL+ Y +LMYTMRRMEITCDTEYK RTIRGFCHLYDGQEAVA GV +AL + DSWITSYRCHC AL+RG TVE I +ELFGFKEG  +GKGGSMH Y+KSHNF+GG GIVGAQVP+GTGLAFA +Y TP GE+ PVA+AMYGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPGI++DGMNV+ VREG  F K++   GNGPL+VE++TYRYHGHSMSDPGTTYRNRDEI   R+ RDP+E VK  L+++ L    ++KE+EK IRKEVQ+ALK+AKAG+ PP EEL+ +I+     G  Y     P ++R+PDR KS
Sbjct:   32 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKHIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKS 402
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: W7TQD1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD1_9STRA)

HSP 1 Score: 528 bits (1360), Expect = 5.300e-171
Identity = 258/382 (67.54%), Postives = 305/382 (79.84%), Query Frame = 2 
Query:  122 AMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWI---AGENYEKPVVPGFVRLPDRAKSFGNIMG 1258
            A S+D  ITV  +K  DTHNL    PT A  ++EEL+ Y +LMYTMRRMEITCDTEYK RTIRGFCHLYDGQEAVA GV +AL + DSWITSYRCHC AL+RG TVE I +ELFGFKEG  +GKGGSMH Y+KSHNF+GG GIVGAQVP+GTGLAFA +Y TP GE+ PVA+AMYGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPGI++DGMNV+ VREG  F KE+   GNGPL+VE++TYRYHGHSMSDPGTTYRNRDEI   R+ RDP+E VK  L+++ L    ++KE+EK IRKEVQ+ALK+AKAG+ PP EEL+ +I+     G  Y     P ++R+PDR KS    MG
Sbjct:  671 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKSRTFAMG 1047
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A8J2SEA3_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA3_9STRA)

HSP 1 Score: 490 bits (1261), Expect = 2.430e-165
Identity = 258/399 (64.66%), Postives = 295/399 (73.93%), Query Frame = 2 
Query:   47 MMRAAVAPARRAAVQRPSGGMATARAMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPD-EELYSNIWIAGENYEKPVVPGFVRLPDRAKS 1240
            M+R A+   RRAA  RP      AR   ++  ITV F      H    P  T A T++ EL+ YFK MYTMRRMEITCD EYKARTIRGFCHLYDGQEA+  GV+AALS  DSWITSYRCHC ALARGGTVE + AEL G   G + GKGGSMH YNK HNFFGG GIVGAQVP+GTGLAFA KY TP GE  PVA+  YGDGAANQGQIWES NMA+LWKLPMI+CIENNQYGMGTS  RSS N+ YYTMGN IPG+K+DGMNVL VREG    +++ S+GNGP+ VE+ TYRYHGHSMSDPGTTYRNRDEIA+MR  RDP+E VKNLL+++  A   ELK IEKD+R EV  A  RAKAG+ P   +EL  NI++  E   K V   ++R+PD  KS
Sbjct:    1 MLRTAI---RRAASARP------ARRTLSEASITVDFPGAYTAHLGDEPAAT-AETNKTELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGVQAALSPEDSWITSYRCHCIALARGGTVEGVLAELMGQSHGQTGGKGGSMHFYNKEHNFFGGQGIVGAQVPVGTGLAFANKYKTPLGEPMPVAIGCYGDGAANQGQIWESMNMAALWKLPMIFCIENNQYGMGTSISRSSCNNDYYTMGNVIPGLKMDGMNVLSVREGMKHVRDYVSQGNGPMVVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRQTRDPIEFVKNLLLEHTDATEDELKAIEKDVRAEVAAACDRAKAGSPPSSIDELVGNIYLDAEG--KDVPQPYIRMPDYEKS 387
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: F0Y4Q8_AURAN (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Q8_AURAN)

HSP 1 Score: 485 bits (1249), Expect = 1.570e-163
Identity = 247/377 (65.52%), Postives = 287/377 (76.13%), Query Frame = 2 
Query:  116 ARAMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDE--ELYSNIWIAGENYEKPVVPGFVRLPDRAKS 1240
            AR+MS    +T+ F     TH    P    A TS+EEL+ YFK MYTMRRMEITCD EYKARTIRGFCHLYDGQEA+  G+ AAL + DSWITSYRCHC  LARGGTVE + AEL G   G + GKGGSMH YNK  NF+GG GIVGAQVP+GTGLAFA KY TP GE  PVA+  YGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS  RSSSN+ YYTMGN IPGIK+DGMNVL VREG    K++   GNGP+YVE+ TYRYHGHSMSDPGTTYRNRDEIA+MR+ RDP+E VK +LVD+  A  +ELK +EK IRKEV +A  RAKAG  PPD   +L +NI++  +   +P    ++R+PD  KS
Sbjct:   18 ARSMSA---VTIEFPGAYATHRCEAP-DAVAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGA-PPDSIADLTNNIYLTEDGKSEP--QAYIRMPDYTKS 387
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A7S1Z3N8_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N8_TRICV)

HSP 1 Score: 485 bits (1248), Expect = 3.390e-163
Identity = 243/392 (61.99%), Postives = 293/392 (74.74%), Query Frame = 2 
Query:   71 ARRAAVQRPSGGMATARAMSTDK-QITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPDRAKSF 1243
            AR+AA  R     A AR MS+D    T   T   + HNL          +++ELM +F+LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+ AAL+  D WITSYRCHC ALARGG+V A+ +ELFG  EGMS+ KGGSMH YNK H+F+GGAGIVGAQVP+G GL+FA KY    GED  VA+A YGDGAANQGQIWE++NMASLWKLPMI+CIENN YGMGTS +R SS+S YY MGNHIPGI++DGMN+L V+ G +F +++CS GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L+D   A+A E+KE+EK IR+EVQE +  AK G  P  EEL+ +++      +    P  +R+PD AKSF
Sbjct:   13 ARKAAAPRA----AAARFMSSDNPSATFDLTGSFEVHNLESEPENTIDMTKDELMKHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAALAPEDDWITSYRCHCQALARGGSVGAVISELFGMVEGMSKAKGGSMHFYNKKHHFWGGAGIVGAQVPVGVGLSFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSIDRHSSHSDYYKMGNHIPGIRIDGMNLLAVKRGMSFVRDFCSSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKTLMDAGFADADEIKEVEKRIRREVQEEVSEAKKGNRPGLEELFKHVYAKSMEKDDYEYPPHIRMPDHAKSF 400
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A7S0GGJ8_9STRA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGJ8_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 2.790e-162
Identity = 230/338 (68.05%), Postives = 270/338 (79.88%), Query Frame = 2 
Query:  215 SREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPD 1228
            ++ ELM++FKLMY MRRMEIT D EYKARTIRGFCHLYDGQEAVA G+++  +  DSWITSYRCHC ALARGGT+E +  ELFGF  GMS+GKGGSMH YNK HNF+GG GIVGAQVP GTGLAFA KY TP GE  PVA+A YGDGAANQGQIWES+NMASLWKLPMI+CIENN YGMGTS ER SS++ Y+ MGNHIPG+++DGMNVL V+EG  F KE+C+ GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E +K  ++D     A+ELKE+EK IRKEVQ  +K+AK   VPP EEL+S I+             F+R+PD
Sbjct:    6 TQSELMAHFKLMYMMRRMEITFDNEYKARTIRGFCHLYDGQEAVATGIDSVFTQEDSWITSYRCHCVALARGGTIEQVAGELFGFVNGMSKGKGGSMHFYNKEHNFYGGDGIVGAQVPKGTGLAFANKYNTPPGEAMPVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSIERHSSHNDYFKMGNHIPGVRIDGMNVLAVKEGMRFVKEFCANGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPIEFLKKTMIDAGFTNAEELKELEKKIRKEVQSQVKKAKESHVPPPEELFSYIYAKDTGKGNQEAVPFIRMPD 343
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A7S3Q1P9_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1P9_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 5.640e-162
Identity = 250/399 (62.66%), Postives = 291/399 (72.93%), Query Frame = 2 
Query:   53 RAAVAPARRAAVQRPSGGMATARAMSTDKQITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIW---IAGENYEKPVVPGFVRLPDRAKS 1240
            R  +A ARRA+          ARAMS+D  +T   T   +THNL      E   S+EEL+ +F+LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+ AA    DSWITSYRCHC ALARGG V  I AELFG K GM+ GKGGSMH Y+K +NFFGG GIVGAQVP+GTGLAFA KY    GED  VA+A YGDGAANQGQIWE++NMASLWKLPMI+CIENN YGMGTS ER SS+S YY MGNHIPG+++DGMN+L V+EG  F KE C  GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L++   AEA E+K IEK IRKEVQ   K+AK        +++  ++   +AG   EK     F+R+PD AKS
Sbjct:    6 RNTLAAARRASTTGVPSLKFGARAMSSDS-VTFDLTGSFETHNLDTAPNNEITMSKEELLGHFQLMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDKEDSWITSYRCHCIALARGGKVNEILAELFGNKGGMTDGKGGSMHFYSKKNNFFGGQGIVGAQVPVGTGLAFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNILAVKEGMRFVKEHCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAMTRSTRDPLEFVKKTLMEAGFAEADEIKSIEKRIRKEVQAETKKAKEYPDVELSDMFDYVYADEMAGRKQEKQ---DFIRMPDYAKS 400
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BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Match: A0A6V2BH17_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BH17_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 1.220e-159
Identity = 236/379 (62.27%), Postives = 280/379 (73.88%), Query Frame = 2 
Query:  110 ATARAMSTDK-QITVPFTKEIDTHNLSLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSQGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEKDIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPDRAKSF 1243
            A  R MS+D    T   T   +T+NL           +EELM +FK MYT+RRMEITCD EYKAR IRGFCHLYDGQEAVA G+ AA++  DSWITSYRCHC AL RGGTV  +  ELFG  EG S+ KGGSMH YNK HNF+GGAGIVGAQVPIG GLAFA KY    GE   +AVA YGDGAANQGQIWES+NMASLWKLPM++CIENNQYGMGTS +R SS+S Y+ MGNHIPGI++DGMNVL V+ GF F KE+C  GNGP+Y E+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L+D   A+A E+K++EK IRK+VQE +  AK    P  +EL  +++ A  +     +P  +R+PD AKS+
Sbjct:   27 AAVRFMSSDNPSATFDLTGSFETYNLDTAPEETIEMDKEELMQHFKTMYTVRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAITQEDSWITSYRCHCQALLRGGTVRKVIGELFGSVEGYSKSKGGSMHFYNKEHNFYGGAGIVGAQVPIGAGLAFANKYNAKPGEPMNIAVACYGDGAANQGQIWESANMASLWKLPMVFCIENNQYGMGTSIDRHSSHSDYFKMGNHIPGIRIDGMNVLAVKAGFEFIKEFCGNGNGPMYAELMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKTLIDAGFADADEIKQVEKQIRKQVQEEVMLAKQDPKPTLDELIKHVYAADTSIGNYEMPDHIRMPDFAKSY 405
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18943.5204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBE8_9PHAE9.870e-25083.13Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A835Z5P4_9STRA5.430e-20876.72Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A4D9DDV1_9STRA2.780e-17967.82Pyruvate dehydrogenase E1 component subunit alpha ... [more]
W7TQD1_9STRA5.300e-17167.54Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A8J2SEA3_9STRA2.430e-16564.66Pyruvate dehydrogenase E1 component subunit alpha ... [more]
F0Y4Q8_AURAN1.570e-16365.52Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A7S1Z3N8_TRICV3.390e-16361.99Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S0GGJ8_9STRA2.790e-16268.05Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A7S3Q1P9_9STRA5.640e-16262.66Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A6V2BH17_9STRA1.220e-15962.27Pyruvate dehydrogenase E1 component subunit alpha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18943contigH-elongata_contig18943:729..6958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score637.1
Seed ortholog evalue5.7e-180
Seed eggNOG ortholog2880.D7FIP4
Preferred namePDHA1
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00161,ko:K05694
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04520,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04520,map04922,map05230
KEGG ModuleM00307
GOsGO:0003674,GO:0003824,GO:0004738,GO:0004739,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005967,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006091,GO:0006099,GO:0006101,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007124,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009060,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009295,GO:0009628,GO:0009651,GO:0009987,GO:0010035,GO:0010038,GO:0015980,GO:0016049,GO:0016491,GO:0016620,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0018130,GO:0019362,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030447,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034603,GO:0034604,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0040007,GO:0042221,GO:0042645,GO:0043167,GO:0043169,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045254,GO:0045333,GO:0046390,GO:0046483,GO:0046496,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0070783,GO:0071616,GO:0071704,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0098798,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
EggNOG free text desc.pyruvate dehydrogenase (acetyl-transferring) activity
EggNOG OGsCOG0462@1,KOG0225@2759
EC1.2.4.1,3.1.3.48
COG Functional cat.C
BiGG ReactioniMM904.YER178W,iND750.YER178W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01009,ko04516
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A)
Ec32 orthologEc-27_000530.1
Exons10
Model size2169
Cds size1239
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18943.5204.1prot_H-elongata_contig18943.5204.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18943 1625..6924 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930082.0983331-UTR-H-elongata_contig18943:728..16241622930082.0983331-UTR-H-elongata_contig18943:728..1624Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18943 729..1624 -
1691679273.8182187-UTR-H-elongata_contig18943:728..16241691679273.8182187-UTR-H-elongata_contig18943:728..1624Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18943 729..1624 -
1622930082.3273616-UTR-H-elongata_contig18943:6924..69581622930082.3273616-UTR-H-elongata_contig18943:6924..6958Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18943 6925..6958 -
1691679273.922676-UTR-H-elongata_contig18943:6924..69581691679273.922676-UTR-H-elongata_contig18943:6924..6958Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18943 6925..6958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930082.1307895-CDS-H-elongata_contig18943:1624..17921622930082.1307895-CDS-H-elongata_contig18943:1624..1792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 1625..1792 -
1691679273.830739-CDS-H-elongata_contig18943:1624..17921691679273.830739-CDS-H-elongata_contig18943:1624..1792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 1625..1792 -
1622930082.149221-CDS-H-elongata_contig18943:2148..23261622930082.149221-CDS-H-elongata_contig18943:2148..2326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 2149..2326 -
1691679273.839852-CDS-H-elongata_contig18943:2148..23261691679273.839852-CDS-H-elongata_contig18943:2148..2326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 2149..2326 -
1622930082.174478-CDS-H-elongata_contig18943:2663..27341622930082.174478-CDS-H-elongata_contig18943:2663..2734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 2664..2734 -
1691679273.8489146-CDS-H-elongata_contig18943:2663..27341691679273.8489146-CDS-H-elongata_contig18943:2663..2734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 2664..2734 -
1622930082.1958058-CDS-H-elongata_contig18943:3008..31551622930082.1958058-CDS-H-elongata_contig18943:3008..3155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 3009..3155 -
1691679273.8578331-CDS-H-elongata_contig18943:3008..31551691679273.8578331-CDS-H-elongata_contig18943:3008..3155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 3009..3155 -
1622930082.2159882-CDS-H-elongata_contig18943:3461..36251622930082.2159882-CDS-H-elongata_contig18943:3461..3625Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 3462..3625 -
1691679273.8670416-CDS-H-elongata_contig18943:3461..36251691679273.8670416-CDS-H-elongata_contig18943:3461..3625Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 3462..3625 -
1622930082.2314878-CDS-H-elongata_contig18943:4179..43451622930082.2314878-CDS-H-elongata_contig18943:4179..4345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 4180..4345 -
1691679273.8794894-CDS-H-elongata_contig18943:4179..43451691679273.8794894-CDS-H-elongata_contig18943:4179..4345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 4180..4345 -
1622930082.247904-CDS-H-elongata_contig18943:4743..48271622930082.247904-CDS-H-elongata_contig18943:4743..4827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 4744..4827 -
1691679273.890396-CDS-H-elongata_contig18943:4743..48271691679273.890396-CDS-H-elongata_contig18943:4743..4827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 4744..4827 -
1622930082.2780323-CDS-H-elongata_contig18943:5301..54141622930082.2780323-CDS-H-elongata_contig18943:5301..5414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 5302..5414 -
1691679273.8977697-CDS-H-elongata_contig18943:5301..54141691679273.8977697-CDS-H-elongata_contig18943:5301..5414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 5302..5414 -
1622930082.2932854-CDS-H-elongata_contig18943:6195..62991622930082.2932854-CDS-H-elongata_contig18943:6195..6299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 6196..6299 -
1691679273.9047613-CDS-H-elongata_contig18943:6195..62991691679273.9047613-CDS-H-elongata_contig18943:6195..6299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 6196..6299 -
1622930082.3098307-CDS-H-elongata_contig18943:6880..69241622930082.3098307-CDS-H-elongata_contig18943:6880..6924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 6881..6924 -
1691679273.9119956-CDS-H-elongata_contig18943:6880..69241691679273.9119956-CDS-H-elongata_contig18943:6880..6924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18943 6881..6924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18943.5204.1

>prot_H-elongata_contig18943.5204.1 ID=prot_H-elongata_contig18943.5204.1|Name=mRNA_H-elongata_contig18943.5204.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=413bp
MMQRMMRAAVAPARRAAVQRPSGGMATARAMSTDKQITVPFTKEIDTHNL
SLPMPTEAVTSREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDG
QEAVAAGVEAALSVTDSWITSYRCHCAALARGGTVEAIFAELFGFKEGMS
QGKGGSMHLYNKSHNFFGGAGIVGAQVPIGTGLAFAGKYATPAGEDTPVA
VAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNS
TYYTMGNHIPGIKLDGMNVLMVREGFAFCKEWCSKGNGPLYVEVDTYRYH
GHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLAEAQELKEIEK
DIRKEVQEALKRAKAGTVPPDEELYSNIWIAGENYEKPVVPGFVRLPDRA
KSFGNIMGDAVV*
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mRNA from alignment at H-elongata_contig18943:729..6958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18943.5204.1 ID=mRNA_H-elongata_contig18943.5204.1|Name=mRNA_H-elongata_contig18943.5204.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6230bp|location=Sequence derived from alignment at H-elongata_contig18943:729..6958- (Himanthalia elongata Himel1 dioecious)
TTAGTACTACTTTGTTGTTAAGGTCATTTTCGTGATGATGCAGCGAATGA
TGAGGGCCGCGGTGGCTCCGGCACGAAGGTGAGCAAGAAGTGCGAAACAA
AATGGATGTGGTGAGGGTCACGCAAAAATTAGTTTACTCTATACATGAGA
TCTAAACAGGAGCGCCTGTGGTGGTACTCCAATGATCAAGACGTCACGGA
TGGACGTGCAGTATTTTTTCTTCTCAACCTCTTCCTGCCCTCATGCCTTC
TTATCCCGCAGTTCTTGTTTTTTACCGAACGAGTAGCGATGCTAGCTGCA
TCATTGTTTTGCAAACATCATTCGCCCCGGTGTGCGTAGCGAGATGTCTG
ACTTGATTCCCCTTCGTCACAGCCGATAAAGTGCCGAACACCTTTTGTCA
TTTTTACCAGTCACGCCTTTGTCCAAACTTGGATACTATATGTTGTGGTG
TTTCCGGAACTAGGGTAGGATCAAAGTGCCAGTGCAGTTTCAACAGGGCA
AACCTCTGCCCACCCTCTTGATGAGTCTATTTTATGATACCGCACGAGAT
GGAACGTCCGCCCAAACCTGTTCAACGATTCTTTTATGCTGGGTTCGTCC
CTCCGACCTTGCCTTCTTTTCCCTCTTGGGGTATGCTTTCCTCGCCGCTG
CTCTCTTAGGGCCGCTGTGCAGCGACCAAGCGGTGGTATGGCGACGGCGA
GGGCGATGTCGACAGACAAGCAGATCACGGTCCCTTTCACCAAGGAGATA
GATACACACAACCGTGAGTCATCGTCGCTCCCGAGCCCTTCGCGCCCCTA
GTCGGTGCGGTTCTGCAGGCTGGTGCTGATGCGGACACTTGTTCATTTTG
GAACACTGGTCTCTCGTTCCGATTATTTTATGGTTCTTTACACAACAAGA
TCGTGCCTAACGATTGACTCATCCTGCGGAAAAAGCCCATCCTTCAGGCA
GTAATATGATATAACATCTACGGCTGTACCGAACTTTGGTTTTAGACTGC
CGCTGCTGTAGACAACAAAAATACCTCACTCCCATTATACACATAATTTT
TTCGAGAAAACCGAGATGAACGACTATTAAATAGTACACCCTCAAAGTTG
CAATGGGCTAGCATTTCACGAAGGCGGGATCGCTGAAAACGCTTCGCGTT
AAAAAAACTAACCTAAAAGAGCAAGGTTGCTACCCACGGACCCGCAGACT
GGGATCATTCCCAAAACAGGAGTCGAATCAAACTGGAAGTTTTGTGGAGT
TTTCAAGCCACGACGTTTTCAAGCCACGCACAATCTTTGTTACATTATAT
ATTAATACTTTCAACGTACTCTAATCCTCACACGTTTTGCTCCGTCTGTA
CGGAGCCACGCAGCTGTGCGAAGCGTCGTGAGGACAGTTGGCAGGTGTCC
TTGTAAAGAGTGACGACCTGTGATTCGACGTCTTTGGTAATCAAATACCA
GATTTAGCTCTCCCCTGTTGCTTCCCTCCGGTAGTATATAATTCTTACAC
TATAACGATTTCCCTGTCGCGCTTTCTTTCCCCCGCCCTCACAGTCTCGC
TTCCGATGCCTACGGAGGCCGTCACCAGTCGCGAGGAGCTGATGTCTTAC
TTTAAGCTCATGTACACCATGCGACGCATGGAGATCACCTGCGACACCGA
GTATAAGGTACCGTCCGTCCCCCCCCCCCCCTACGAGCTTGCCCCGAGCT
TGCCTGTCCTCGTGTCGCTCCCTGTGCCACGGTACGAATTTCGTCCGACT
GCTACCCTGAATAGCCTTTTGCGCCATCATATCTAATCATTTTGAAGTTT
TCGGGTTGTTTTTGGAGTGGTGGGACGAGTTTTGTCTGGTTTTAACCACT
GTACCAGTAAGTATGTCCCGTGCCACCGTGGCTGACGGGATGCGCTGAGT
GACGAGTGCGCGCTGCAGCAGTCGTCGTCATCGCGTCGGATCGAGCGGCT
TCTCGGAATCCGCGGATAAGACATCGCTAATATAGAATCGAGGCTATATA
CGTTATTTCGAGCGCCTTCTGGAGAGGGTTTGACGTCCGTCACGCGCTTT
CTCACGGTTGCGGTGGGCATCGTGTCCTGACACCTCGTTCTAACCCACTC
CAACCCCCCGACGCCCCTTTTGCCTCATCAGGCGCGCACGATCCGTGGGT
TCTGCCACCTGTACGATGGGCAAGAGGCCGTTGCTGCTGGTGTTGAAGCG
GCCCTCAGCGTAACGGTGAGTAAAATTTAGGCCCCTGGATTGCGTTTCTT
TGATCCGGAGTGATTACCAAGCTAAGAAATAAAATACCGCGGTGGGGAAA
CGCGGTTGTACTGCGGCGAAGAACAGGATCGCACGCAGGACTTGGCTGCT
TGAGAGCGCTCGACGCGTACTGAGCGTGCGGGTAGATTCTCCGAAGCTGA
CCTCACGGTTGATCCCGTATTTTGTATCCAACGTGTCCCTGGGCATCCTC
TGTCCCGCCAAGCGTGTCCTCCTTTTTCTCGCCGACGTACCACGATTTCT
CTCTCTTTCGTCCTGTAAGTCGTACGTTTCTCGCCCGCCAATGCCTCGCA
AGATGTACCGTGGCGTGACTGTTATATTTTAGATACATCCTATTTTGCTT
TCGCGTGCGGTAGGACTCGTGGATCACGTCGTACCGATGCCACTGTGCGG
CGCTGGCGCGCGGCGGCACCGTGGAGGCCATATTCGCGGAGCTGTTTGGC
TTTAAAGAGGGAATGTCTCAAGGGAAGGGCGGGTCGATGCACCTGTACAA
TAAGTCGCACAACTTCTTCGGGGGAGCGGGTGAGTGGGAGAGAGAGATAT
ACCAGACTACGTTTCAGAAGAGTAATTGATCGAGATATCCCCGACAGACT
TCGCGTGGCAATGGTGCTGTTGACCATTGCGCCTCGCAGATGCCCCCTGT
CGTGTTTGCGGGAAGCACGTGGTTACACGAACGTGCGGTTGACTTCGTCG
GTGCAGTTACCTTTTCGTATTCAAGATTTTCAATTCGAAGACATAACCCT
CTCTCGCCCCCGCCCCCGTCCCCCCCCCTACTCTTAATCTCAAATTCATG
CCAAATTTCATTTCATGAGATATTCCGGCTTGATTTCGGTCTGTTTCAAA
GACGTTCTCAGCCGTGTCATCTAGCGTTGGATGGCGATGATGCCACCGAC
GGCCGCTACCAAACGCCGCAGTAGGAAATCCGCTACTGCTTTGCGCGTTG
CGGCCACACATCTTCGATGTTTTTGCCAAGGCTCGCCTTGCCTCGCCTCG
AGGTGTTCAAGTGAAAGCCCCGCTCCAGCACGTCCACACATCGAAATATC
CCGCACCTGGATTTTGGTATCTGCGCACGGCAGGTATCGTGGGAGCGCAG
GTGCCTATTGGTACCGGGCTGGCGTTCGCGGGCAAGTACGCCACTCCGGC
GGGCGAGGACACCCCCGTGGCCGTGGCCATGTACGGGGATGGCGCCGCCA
ACCAGGGTCAGATCTGGGAATCGTCAAACATGGCATCATTGTGGAAGGTG
AGTGAAACAGGCGCAGCCCACGGTATCTCTTGCGGGTTGATATTTGTGGC
GCGAAGTCCTTTCTAGTTGCCGCAATTTTTCTCGTCGTTGTAGTTTTTCC
TCCTTGCGATGGGTCGCCTTACATGGATGAGTGTCGTCCTTACTCTGGAG
TATTTGTCAAAGATGCCCGAAGCGGGGTCAAGGCGTGCACATCTTGGGCC
TTCACGTCGTAAGAAATATAACTCCCCTGACCCCTCGAGCTTTAAAATAA
ATAATTATATATATAATGTTACTCCTGCTCTCCGCCGTAATCTACCGCCC
CAGCTGCCGATGATCTACTGCATCGAAAACAACCAGTACGGCATGGGGAC
GTCGAAGGAGCGCTCATCTTCTAACTCTACCTACTACACCATGGGCAACC
ACATCCCCGGCATCAAGCTGGACGGCATGAACGTGCTCATGGTCCGAGAG
GTAAGTGACTGAGATTTTGTTTTTTAACGCGCCACGCGGTGAACGGCGGC
TGGCTGAACGGTAATTATTTCTTATTCGCCAGTAAGCATCGCCTTGTAAG
AGCAGCCCTGTTTGAAGACGTGCGTTAGACGAGAAATGGCTGAGGCTTCA
CATCGGAACCCATCGCGCGTGGCGCTTTTTTTCTCTGACGTGCTGCTATA
TCACCTTTGAGATTGCTTGTCAAAGAGATTTTTTTTACTCTTCCCGCTCT
CTTTTTGCCGATTGACCCCACCAGGGATTCGCTTTCTGCAAAGAGTGGTG
CTCGAAGGGCAACGGTCCCCTCTACGTGGAAGTAGATACCTACAGGTGTG
TTGTTGTTTGGCGTACTACGGTAGTATTTGGTCGATCTGCTCCGAGCGCG
CGATGTCATCGCCAGCGAGGTTTACAATGTTCTGGATCGTCAGGGAGAGG
CGATCCCAAAATGATTGGATTGCCTAAAGAAGAATTGTACGAAAGTTGGG
ACGTTACGCTGATGTTACGCGTGGTGACTGCTGGTGCAGGTCTGCTGTCG
CCTTTCGAAGTGGCAAACCTTGAAAGATATGCTCTTCTAGACTCTCTTTG
GCCATGATTCCTCCCGCTTCATCGAAACTGCGTCCCACGATCTTTCCTTG
GAACTCTGATTGTATTAAAAAATCCCAAACAGATACCACGGACACTCCAT
GTCCGACCCCGGGACCACGTACCGCAACCGCGACGAGATCGCATCGATGC
GTACGGCTCGCGATCCCGTCGAACTGGTCAAGAACCTCCTTGTGGATAAC
GATCTCGCCGAGGCACAGGAGCTGAAGGAGATCGAGAAGGATATTCGGAA
GGAGGTTCAGGTAATTGTCGCATCCACCATTCGTTTGGTAGCACTATTTA
TTATAACAGTATTATTTAGTAGTGTGTTCTATTCGCAAAAGCGTCTGTCT
GGTGCACGCTTTCGATGAAGATGGCTCGTGTTTCGGTCAGAGACTTCTGC
TAGGATTTCGATTGGTTCGACGCGAAGCTGGGCTCGGTGCGCCTAGCGTT
TTGTTTCAAGCGGTTCTCGCTTGTTGAGATCGGACCTTTGATTCGGAAAT
CTGACTCCTTGCACCTAGTAATACACGGGGTCCTCTTCCTTACACCGTTG
TGGCTTCGGCACCTGCCTCCACCTCTCGTGGTGAACCCCTTCCCTTGCTT
GGGTTGTATCTTGCAGGAGGCGCTCAAGAGGGCCAAGGCGGGAACGGTGC
CACCCGACGAAGAGCTCTACAGCAACATCTGGATTGCGGGCGAAAATTAC
GAAAAGCCCGTGGTCCCCGGATTCGTTCGCCTGCCCGACCGCGCCAAGAG
CTTCGGGAACATCATGGGCGACGCCGTGGTGTAGGGCGGAGACGGCACGT
TACAAATTATTTTCGTTTCGAGGGGCACTGTCACCTTTGCCGCCCGCCTC
CTCCGAACCTCCTCAAGATCAAGCCTAGTACTCTCCGATATAGGTTCTTT
TACATGAATGGCCACGTGTCGAGTCGAGTGCTTCTTTGGTAGCCGAGGTG
GGATACAGTTAAATCTGTTGGGAGGGAGAAGGGGGGAGTGGGGAGGGAAT
TGCGTGGGCCACGTCACGAGTCGGCCGCTATTCGTTCCATTTTATCGGTG
AAGAAAAATTTTGATATCTTTTGTAATGATACAACCATCAAACTTAGCCG
TATAGCTGTAGGCAAAATGGAGAGGGTAGGAGATACACCAAAGAAGGCTT
AATTAATAGCGTTGATGTAGTCTGGAACCGAACGTGGCGTGTTCGGGGAG
GTATTCCCCAGAGATGGGAAGATTGAGTCACACGAATGATAGCTTTTATT
GTGGTCCGCGAAGCAACGGTTTAGAGACAAGGTGAATTTTGCTCTATAAG
AGCAAGAACCATTAACTATGAGCCGTGTCTGCGAGAATTCACGATTATAG
CATGATGAACAAAATGACTGCTCTCGTGCAGATATTTCTCATCAAATTAA
GTCACGTGATGGCAATATCATCACATATGACGAGTCCCGCGCAGGCTCAC
TATCACGGCTTATGGTTTGACCGAGGGCTTCGTGTCTGTATGATAAAGGC
ACACCATCCTCCATGATATATCGATTGGCGTGCGCGTCTTTCCCGAAGTC
CCAAGAAGTCCCGGAGATGCTGGTCATTTGGACTCACTCTACGTATTGTA
TGTTACTGATGTACCTGGTATTAACTCATCCCAACCCTCCGAACATTCAC
ACCTTTATTACACCATGCGCGAATAAATTC
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Coding sequence (CDS) from alignment at H-elongata_contig18943:729..6958-

>mRNA_H-elongata_contig18943.5204.1 ID=mRNA_H-elongata_contig18943.5204.1|Name=mRNA_H-elongata_contig18943.5204.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at H-elongata_contig18943:729..6958- (Himanthalia elongata Himel1 dioecious)
ATGATGCAGCGAATGATGAGGGCCGCGGTGGCTCCGGCACGAAGATGATG
CAGCGAATGATGAGGGCCGCGGTGGCTCCGGCACGAAGGGCCGCTGTGCA
GCGACCAAGCGGTGGTATGGCGACGGCGAGGGCGATGTCGACAGACAAGC
AGATCACGGTCCCTTTCACCAAGGAGATAGATACACACAACCGGCCGCTG
TGCAGCGACCAAGCGGTGGTATGGCGACGGCGAGGGCGATGTCGACAGAC
AAGCAGATCACGGTCCCTTTCACCAAGGAGATAGATACACACAACCTCTC
GCTTCCGATGCCTACGGAGGCCGTCACCAGTCGCGAGGAGCTGATGTCTT
ACTTTAAGCTCATGTACACCATGCGACGCATGGAGATCACCTGCGACACC
GAGTATAAGTCTCGCTTCCGATGCCTACGGAGGCCGTCACCAGTCGCGAG
GAGCTGATGTCTTACTTTAAGCTCATGTACACCATGCGACGCATGGAGAT
CACCTGCGACACCGAGTATAAGGCGCGCACGATCCGTGGGTTCTGCCACC
TGTACGATGGGCAAGAGGCCGTTGCTGCTGGTGTTGAAGCGGCCCTCAGC
GTAACGGCGCGCACGATCCGTGGGTTCTGCCACCTGTACGATGGGCAAGA
GGCCGTTGCTGCTGGTGTTGAAGCGGCCCTCAGCGTAACGGACTCGTGGA
TCACGTCGTACCGATGCCACTGTGCGGCGCTGGCGCGCGGCGGCACCGTG
GAGGCCATATTCGCGGAGCTGTTTGGCTTTAAAGAGGGAATGTCTCAAGG
GAAGGGCGGGTCGATGCACCTGTACAATAAGTCGCACAACTTCTTCGGGG
GAGCGGGACTCGTGGATCACGTCGTACCGATGCCACTGTGCGGCGCTGGC
GCGCGGCGGCACCGTGGAGGCCATATTCGCGGAGCTGTTTGGCTTTAAAG
AGGGAATGTCTCAAGGGAAGGGCGGGTCGATGCACCTGTACAATAAGTCG
CACAACTTCTTCGGGGGAGCGGGTATCGTGGGAGCGCAGGTGCCTATTGG
TACCGGGCTGGCGTTCGCGGGCAAGTACGCCACTCCGGCGGGCGAGGACA
CCCCCGTGGCCGTGGCCATGTACGGGGATGGCGCCGCCAACCAGGGTCAG
ATCTGGGAATCGTCAAACATGGCATCATTGTGGAAGGTATCGTGGGAGCG
CAGGTGCCTATTGGTACCGGGCTGGCGTTCGCGGGCAAGTACGCCACTCC
GGCGGGCGAGGACACCCCCGTGGCCGTGGCCATGTACGGGGATGGCGCCG
CCAACCAGGGTCAGATCTGGGAATCGTCAAACATGGCATCATTGTGGAAG
CTGCCGATGATCTACTGCATCGAAAACAACCAGTACGGCATGGGGACGTC
GAAGGAGCGCTCATCTTCTAACTCTACCTACTACACCATGGGCAACCACA
TCCCCGGCATCAAGCTGGACGGCATGAACGTGCTCATGGTCCGAGAGCTG
CCGATGATCTACTGCATCGAAAACAACCAGTACGGCATGGGGACGTCGAA
GGAGCGCTCATCTTCTAACTCTACCTACTACACCATGGGCAACCACATCC
CCGGCATCAAGCTGGACGGCATGAACGTGCTCATGGTCCGAGAGGGATTC
GCTTTCTGCAAAGAGTGGTGCTCGAAGGGCAACGGTCCCCTCTACGTGGA
AGTAGATACCTACAGGGATTCGCTTTCTGCAAAGAGTGGTGCTCGAAGGG
CAACGGTCCCCTCTACGTGGAAGTAGATACCTACAGATACCACGGACACT
CCATGTCCGACCCCGGGACCACGTACCGCAACCGCGACGAGATCGCATCG
ATGCGTACGGCTCGCGATCCCGTCGAACTGGTCAAGAACCTCCTTGTGGA
TAACGATCTCGCCGAGGCACAGGAGCTGAAGGAGATCGAGAAGGATATTC
GGAAGGAGGTTCAGATACCACGGACACTCCATGTCCGACCCCGGGACCAC
GTACCGCAACCGCGACGAGATCGCATCGATGCGTACGGCTCGCGATCCCG
TCGAACTGGTCAAGAACCTCCTTGTGGATAACGATCTCGCCGAGGCACAG
GAGCTGAAGGAGATCGAGAAGGATATTCGGAAGGAGGTTCAGGAGGCGCT
CAAGAGGGCCAAGGCGGGAACGGTGCCACCCGACGAAGAGCTCTACAGCA
ACATCTGGATTGCGGGCGAAAATTACGAAAAGCCCGTGGTCCCCGGATTC
GTTCGCCTGCCCGACCGCGCCAAGAGCTTCGGGAACATCATGGGCGACGC
CGTGGTGTAGGAGGCGCTCAAGAGGGCCAAGGCGGGAACGGTGCCACCCG
ACGAAGAGCTCTACAGCAACATCTGGATTGCGGGCGAAAATTACGAAAAG
CCCGTGGTCCCCGGATTCGTTCGCCTGCCCGACCGCGCCAAGAGCTTCGG
GAACATCATGGGCGACGCCGTGGTGTAG
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