mRNA_H-elongata_contig18934.5199.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 154 bits (388), Expect = 8.930e-43 Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 1
Query: 1 MQLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
MQLTTEFFA+MMG +VQPKDVFLAFTVDQGGNVVNACRNL VEVLKCNAHRLNSVTMWALGI+GS++TGENP MEKLMKRL
Sbjct: 1 MQLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRL 81
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.330e-40 Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 1
Query: 7 LTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
LTTEFFA+MMG +VQPKDVFLAFTVDQGGNVVNACRNL VEVLKCNAHRLNSVTMWALGI+GS++TGENP MEKLMKRL
Sbjct: 331 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRL 409
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.030e-26 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 4 QLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
QLT E+F MG V+P DVFLAFTVDQGGNVVNAC LGV+V+KCN HR+NS +WALGI+GS T N M LMK+L
Sbjct: 6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKL 85
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 108 bits (270), Expect = 9.710e-26 Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 4 QLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
+LT E+FA+ MG DV+PKDVFLAFTVDQGGNVVNAC+ LGV V+KCN HR+N+ +WALGI+G+ + N M LMK+L
Sbjct: 340 ELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKL 417
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 100 bits (249), Expect = 6.530e-23 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 7 LTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKL 231
LT E+F ++MG V+ +DVFLAFTVDQG NVVNAC LGV V++CN HR+NS +WALGI+GS T +N M+KL
Sbjct: 152 LTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPMKKL 226
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.220e-22 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 7 LTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKL 231
LT E+ ++MG V+ +DVFLAFTVDQG NVVNAC LGV V++CN HR+NS +WALGI+GSV T +N M+KL
Sbjct: 152 LTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPMKKL 226
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.670e-22 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 4 QLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
+LT E+F+ MG VQP DVFLAFTVDQG N++NAC LGV V++CN HRLN+ +WALGI+G + NP M LMK+L
Sbjct: 147 KLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKL 224
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.700e-22 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 4 QLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
+LT E+F+ MG VQP DVFLAFTVDQG N++NAC LGV V++CN HRLN+ +WALGI+G + NP M LMK+L
Sbjct: 342 KLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKL 419
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.860e-21 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 7 LTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
LT E+F +++G VQP DVFL FTVDQG N+VNA LGV V++CN HR+NS +WALGI+G +T +N M LMK+L
Sbjct: 149 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKL 227
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.630e-15 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 34 MGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHRLNSVTMWALGISGSVKTGENPDMEKLMKRL 243
MG V P + FLAFTVDQG N++NAC L V V++CN HR+N+ +WALGI+ K +NP M LMK+L
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAA--KGRKNPTMGTLMKKL 68 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18934.5199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18934.5199.1 >prot_H-elongata_contig18934.5199.1 ID=prot_H-elongata_contig18934.5199.1|Name=mRNA_H-elongata_contig18934.5199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp MQLTTEFFAEMMGNDVQPKDVFLAFTVDQGGNVVNACRNLGVEVLKCNAHback to top mRNA from alignment at H-elongata_contig18934:6475..6717- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18934.5199.1 ID=mRNA_H-elongata_contig18934.5199.1|Name=mRNA_H-elongata_contig18934.5199.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=243bp|location=Sequence derived from alignment at H-elongata_contig18934:6475..6717- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18934:6475..6717- >mRNA_H-elongata_contig18934.5199.1 ID=mRNA_H-elongata_contig18934.5199.1|Name=mRNA_H-elongata_contig18934.5199.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at H-elongata_contig18934:6475..6717- (Himanthalia elongata Himel1 dioecious)back to top |