mRNA_H-elongata_contig188951.5187.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 180 bits (456), Expect = 1.050e-46 Identity = 90/229 (39.30%), Postives = 139/229 (60.70%), Query Frame = 1
Query: 34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
EP ++ EAQAS EWP+W+K + E + G W++ + PK + +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV AYL D++ EIY+ PE + D ++ L+K +YGL G W +K EL G++R +ADPCV+ W V +I V+VDDLL+ + + + E+ +DL F + DLGE
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGE 1134
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 167 bits (424), Expect = 1.660e-42 Identity = 85/222 (38.29%), Postives = 132/222 (59.46%), Query Frame = 1
Query: 55 AQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
AQAS EW +W+K + E + G W++ + PK + +G + VF+RK +K+ ++ KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV AYL D++ EIY+ PE + D ++ L+K +YGL G W +K EL G++R +ADPCV+ W V +I V+VDDLL+ + + + E+ +DL F + DLGE
Sbjct: 718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGE 939
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 166 bits (420), Expect = 6.250e-42 Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
+D P ++ EA+AS EW +WKK + EM G + + P G+ +G + VF +K D+DG I +YK RLVAQG+ Q+ G+ Y E+ +P S+R L + A E Q+DV AYL ++E EIY+ PE Y D +V L+K +YGL G W ++F +L + GF + +AD CV++ I G + +I V+VDDLL+ S T D + +L + F +KDLGE
Sbjct: 875 IDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGE 1105
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 162 bits (410), Expect = 1.330e-40 Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 1
Query: 34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILH--GVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
+P ++ EA S+EWP+WK+ IA+EM+ + G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P ASIR++L++ A WE Q+DV AYL D+E EIY+ P + K+ V LK+ +YGL G + KK EL + G RS+ D CVF W+ + V++ +I + VDD +A TK +++ + F + DLGE
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGE 1151
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 160 bits (404), Expect = 8.350e-40 Identity = 93/234 (39.74%), Postives = 136/234 (58.12%), Query Frame = 1
Query: 34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWIL--HGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY 729
+P + +A + + +W+K E+E GV++ V RP+ + ++G++ VFK K DG++EKYK RLVAQGF QV+GI Y E+ +P SIR++L++ A WE Q+DV A+L ++E EIY+++P + S V LKKA+YGL W KK EL+ GF R QAD CVF + H ++AV YVDD +V S + + DL S F + DLGE +
Sbjct: 994 DPLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAV---YVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCW 1224
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT) HSP 1 Score: 153 bits (386), Expect = 9.190e-40 Identity = 91/236 (38.56%), Postives = 135/236 (57.20%), Query Frame = 1
Query: 25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDS--RKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVF-RWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEA 723
++ EP T EA SSE PQWK+ I E+E W++V+ P G LG R +FKRK+ DG I+KYK RLV +G+RQ +G+ Y ++ SP SIRMVL++ A + Q+DV A+L ++E EIY+E PE + S +V L K++YGL W +KF + GF+ ++ D CV+ + HG V+ + +YVDD+L+ + + L S F +KD+G A
Sbjct: 26 VENEPKTYQEAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYVKNTTHGYVI--LCLYVDDMLIIGSNDKMIRSTKDMLKSKFDMKDMGLA 259
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 159 bits (402), Expect = 1.510e-39 Identity = 83/236 (35.17%), Postives = 136/236 (57.63%), Query Frame = 1
Query: 16 ARQLDPE-PTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
A ++ P+ P T+ +A+ S EW W+ + E G W++ E + + ++G+R VF +K D+ G++ +YK RLVAQGF Q+ G+ Y ++ SP ++R +++ A WE RQ+D+ AYL ++E EI++E PE + D +V LK +YGL G +W KK +L GF R+ ADPCV+ G + ++ V+VDD+++ ++ + V L F +KDLGE
Sbjct: 847 AGEIGPDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKI-TILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGE 1081
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 157 bits (396), Expect = 2.230e-39 Identity = 90/233 (38.63%), Postives = 138/233 (59.23%), Query Frame = 1
Query: 34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILH--GVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
+P ++ EA S+EWP+WK+ I +EM+ + G + +VE PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + E+ +P ASI ++L++ A WE Q+DV AYL D+E EIY++ P + K+ V LK+ +YGL G + KK EL + G RS+ D CVF W+ + V++ +I + VDD +A TK +++ + F + DLGE
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGE 341
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D) HSP 1 Score: 150 bits (380), Expect = 4.410e-39 Identity = 87/250 (34.80%), Postives = 144/250 (57.60%), Query Frame = 1
Query: 34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRK--QVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY------YRDATSRGTG 759
+PTT A + +W++ + EM+ + GVW +V+ P+G +G + ++KRKI DG++E YK RLVA+G+ Q +G+ YEE+ SP SIR++L++ A +E Q+DV A+L ++E ++Y+E P+ + S + +V LK+++YGL W +F +++ GF ++ +PCV++ G V +V+YVDD+L+ L S F +KDLGEA+Y YRD + R G
Sbjct: 88 DPTTYEGAMLDIDSSRWQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSWNIRFNEAVKSFGFIQNMDEPCVYKKD-SGSAVTFLVLYVDDILIIGNDTGMISSVKLWLSSNFSMKDLGEATYILGIKIYRDRSKRLLG 336
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI) HSP 1 Score: 156 bits (395), Expect = 1.240e-38 Identity = 84/236 (35.59%), Postives = 138/236 (58.47%), Query Frame = 1
Query: 25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVF-RWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY 729
L+P+ + + EW WK+ + E+ W++VE PKG+ V+G+R V+K K+D+DGR +YK RLVAQGF Q GI + ++ +P ++IR+++S+ AL +D+ AYL ++ E+Y++ P Y D +V LL++A+YGL G W +L + G+ + Q++PC+F R+ G V+ + VYVDD+++A+ K +Q K+ S F I D GE S+
Sbjct: 689 LEPQNLKQAKQRPLEEWRHWKEAMDEEIGSLVEMKTWELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAWFDTLKGKLLSAGYTQIQSEPCLFVRFGDAGPVI--LAVYVDDIVIAARGKEGVDQVKKEFASWFKITDNGELSH 922 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig188951.5187.1 >prot_H-elongata_contig188951.5187.1 ID=prot_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRback to top mRNA from alignment at H-elongata_contig188951:157..1193- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig188951.5187.1 ID=mRNA_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1037bp|location=Sequence derived from alignment at H-elongata_contig188951:157..1193- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig188951:157..1193- >mRNA_H-elongata_contig188951.5187.1 ID=mRNA_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig188951:157..1193- (Himanthalia elongata Himel1 dioecious)back to top |