mRNA_H-elongata_contig18882.5181.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18882.5181.1
Unique NamemRNA_H-elongata_contig18882.5181.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 5.620e-151
Identity = 239/331 (72.21%), Postives = 266/331 (80.36%), Query Frame = 3 
Query:    3 KGLAGFSYECELNGRLVLDTTSVVQNTDYDYEVSIPASVDIGSRVSGVTWYEVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANEN-PVGGSSSAGY---GLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPPLAAGLLRPDANSDAG-----GYAGGVQS-QWGLRDISKMRWPAW 965
            +GL GFSYECE+NG+LVLDTTSVVQNTDY+YEVS+PA+VD GSRVSGVTWYEVH+ RKAD KGTLVHRRFRDF+AL EQVESLMKGHHLRSSLPRFP KKSKLWTNHGD+SFVE+RR+ALE Y KTLLQLPHVSTLDSTRAFLGMVGNLREFS+ W+GKELG  LKRAS +A     VGG+ SAG    G  PPVI S+ G+ +SPPGV PGDRLF+VNG+ TE MSLEAAWSS  RA+RPV+LHF GPI+RMDSTLAPLPEAFLR R P GR+  PS +  DGGPPLA   LRP  +  A      G AGGV   QW LR +     PAW
Sbjct:   19 RGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQ-LPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGML----PAW 344
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 6.700e-148
Identity = 283/509 (55.60%), Postives = 331/509 (65.03%), Query Frame = 3 
Query:    3 KGLAGFSYECELNGRLVLDTTSVVQNTDYDYEVSIPASVDIGSRVSGVTWYEVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANEN-PVGGSSSAGY---GLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPPLAAGLLRPDANSDAGGYAGGVQ------SQWGLRDISKMRWPAWG-QRPDGISDAATGAENDAAAGLGRYRSSAKPPSG-GGGMPPGRAVGPFGDGAGAS---RSSPSSTSRLFGDAE---------GTAAEERQARSWRSPGDTGITGLHTSVWPLGGNPGGAGSRESSD-----WMPDMLIGGGKSSSSAPDAASRWAPSSQPSSAGSHTTTPTGRHPVA 1442
            +GL GFSYECE+NG+LVLDTTSVVQNT+Y+YEVS+PA+VD GSRV GVTWYEVH+ RKAD KGTLVHRRFRDF AL EQVESLMKGHHLRSSLPRFP KKSKLWTNHGD+SFVE+RR+ALE Y KTLLQLPHVSTLDSTRAFLGMVGNLREFS+ W+GKELG  LKRAS +A     VGG+ SAG    G  PPVI S+ G+ +SPPGV  GDRLF+VNG+ TE MSLEAAWSS  RA+RPV+LHF GPI+RMDSTLAPLPEAFLR R P GR+  PS    DGGP LA   LRP  +  A               QW LR +     PAW  ++P    D +  A   +AA    +     P +  G G+  G AVGPFG+G GA+   R++P+++S   GDA          G A +E    SWRSP              L   PG +            WMPD   G G S+SS+P       P +   +AG+  T PT R  +A
Sbjct:   92 RGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATVDTGSRVRGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQ-LPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGML----PAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTNPANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXXXXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSP-------PGNMLGAAGAVPTPPTSREELA 588
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.110e-39
Identity = 101/251 (40.24%), Postives = 138/251 (54.98%), Query Frame = 3 
Query:    6 GLAGFSYECELNGRLVLDTTSVVQNTDYDYEVSIPASVDI----GSRVSGVTWYEVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSAGYGLGPP--VIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPI 740
            G+ G+ Y CE++GR + +TTS V N +++++V IP+SV      G     VTWY +  RR  DG  T VHRR+ DF  LH+Q + +MKGHHL  SLP  P K   L  +  D +F+E RR  L+ Y +TLL++PHV  LD+TRAFLG+VG+LRE S V  G   G      +G A    V      G GL  P   +   Q  + +P GV+ GD L RV G   E  SL       ++  +P L+H    +
Sbjct:  170 GILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIPSSVQACAYKGGDQPNVTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRERSFVVSGGAAG---GGGAGFALTADV-----QGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.540e-31
Identity = 89/257 (34.63%), Postives = 136/257 (52.92%), Query Frame = 3 
Query:    6 GLAGFSYECELNGRLVLDTTSVVQNTDYD-YEVSIPASVDI-GSRVSGVTWYEVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSAGYGLGPPVIASIQ----GSKKSPPGVSPGDRLFRVNGEP-TEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDS 755
            GL  F Y C +NGR +  T   + + D + + ++I  + +   S+   VTWYE+   R +DG  TLVHRR+R+F  L EQV +  KGHHLRSSLP  P ++ KL  +H D +FVE+RR  LE     LL +PHV  +   + FLG    L+E S+++  ++LG+++ R   +  E  +             V+  ++    G +KS   V  GD L +V GEP ++F   +       R  RP+++HF   + R  S
Sbjct:   83 GLFSFRYTCVVNGRPLKATLQGLADEDEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITRT--VVPEESI-------------VVTRVKEAGPGGQKSR--VMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS 322
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.990e-29
Identity = 88/259 (33.98%), Postives = 134/259 (51.74%), Query Frame = 3 
Query:    6 GLAGFSYECELNGRLVLDTTS-VVQNTDYDYEVSI---PASVDIGSRVSGVTWYEVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTL--KRASGIANENPVGGSSSAGYGLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLA 764
            G   F Y C +N R + + T  V +N D  ++ +I     +VD  S    + WY V + R  DG  + VHRRFR+F  L+ Q++  MKGHH+R  LP  PEK  K +T+H D SF++ R   LE +   +  +PHV  +   +AFLG++  +RE+S+ +    LG++L  +   G    +P              V+  IQ  +    GV PGD+L RVNG P +  +  AA +  K   RP+++HF   +I   +T A
Sbjct:   93 GWTSFVYSCCINDRDIKEATQGVPENQDVVFKPTILDTVFTVDDQSEFQ-IAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQNMKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDRQGEPGSSPC-------------VVGMIQKPEVCQ-GVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQ-VINASTTAA 335
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BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A6T9YST3_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA)

HSP 1 Score: 65.5 bits (158), Expect = 5.210e-8
Identity = 45/135 (33.33%), Postives = 66/135 (48.89%), Query Frame = 3 
Query:   15 GFSYECELNGR----LVLDTTSVVQNTDYDYEVSIPASVDIGSRVSGVTWY--EVHSRRKADGKGTLVHRRFRDFFALHEQVESLMKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHV 401
            GF+Y+C  +G+    LV DT       ++     +P ++   S  S + +Y  EV +      +  ++ +RF DF  L   V S   GH L S+LP  P K  KLWT+H + SFV+QRR  L  Y   L  +  V
Sbjct:   82 GFTYKCTFDGQKIPELVFDTQQPESLCEHIKARLLPCAMIRKSGESKIVYYKVEVTNGDPLQKETYVLKKRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNVKKV 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMZ7_ECTSI5.620e-15172.21PX domain containing protein (Partial) (Fragment) ... [more]
A0A6H5JS20_9PHAE6.700e-14855.60PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835YSM5_9STRA5.110e-3940.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CLT8_9STRA2.540e-3134.63PX domain-containing protein n=3 Tax=Monodopsidace... [more]
A0A7S3M5K7_9STRA5.990e-2933.98Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6T9YST3_BIGNA5.210e-833.33Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18882contigH-elongata_contig18882:1495..6137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.4
Seed ortholog evalue5.5e-15
Seed eggNOG ortholog44056.XP_009038266.1
KEGG koko:K06236,ko:K19069
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
EggNOG free text desc.regulation of pentose-phosphate shunt
EggNOG OGsCOG0588@1,KOG0235@2759
EC1.1.99.18
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko01000,ko04516
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhox homologous domain
Ec32 orthologEc-16_001220.1
Exons7
Model size2295
Cds size1554
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930079.9574592-UTR-H-elongata_contig18882:1494..19841622930079.9574592-UTR-H-elongata_contig18882:1494..1984Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 1495..1984 -
1691679272.9315946-UTR-H-elongata_contig18882:1494..19841691679272.9315946-UTR-H-elongata_contig18882:1494..1984Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 1495..1984 -
1622930080.0138865-UTR-H-elongata_contig18882:4324..43361622930080.0138865-UTR-H-elongata_contig18882:4324..4336Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 4325..4336 -
1691679272.977653-UTR-H-elongata_contig18882:4324..43361691679272.977653-UTR-H-elongata_contig18882:4324..4336Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 4325..4336 -
1622930080.030208-UTR-H-elongata_contig18882:5187..52291622930080.030208-UTR-H-elongata_contig18882:5187..5229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 5188..5229 -
1691679272.9873972-UTR-H-elongata_contig18882:5187..52291691679272.9873972-UTR-H-elongata_contig18882:5187..5229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 5188..5229 -
1622930080.0522568-UTR-H-elongata_contig18882:5722..58421622930080.0522568-UTR-H-elongata_contig18882:5722..5842Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 5723..5842 -
1691679273.0041637-UTR-H-elongata_contig18882:5722..58421691679273.0041637-UTR-H-elongata_contig18882:5722..5842Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 5723..5842 -
1622930080.0741644-UTR-H-elongata_contig18882:6060..61371622930080.0741644-UTR-H-elongata_contig18882:6060..6137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 6061..6137 -
1691679273.0180075-UTR-H-elongata_contig18882:6060..61371691679273.0180075-UTR-H-elongata_contig18882:6060..6137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18882 6061..6137 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930079.9700484-CDS-H-elongata_contig18882:1984..30521622930079.9700484-CDS-H-elongata_contig18882:1984..3052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 1985..3052 -
1691679272.9417455-CDS-H-elongata_contig18882:1984..30521691679272.9417455-CDS-H-elongata_contig18882:1984..3052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 1985..3052 -
1622930079.9808495-CDS-H-elongata_contig18882:3294..34411622930079.9808495-CDS-H-elongata_contig18882:3294..3441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 3295..3441 -
1691679272.9497085-CDS-H-elongata_contig18882:3294..34411691679272.9497085-CDS-H-elongata_contig18882:3294..3441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 3295..3441 -
1622930079.993741-CDS-H-elongata_contig18882:3728..39291622930079.993741-CDS-H-elongata_contig18882:3728..3929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 3729..3929 -
1691679272.9582639-CDS-H-elongata_contig18882:3728..39291691679272.9582639-CDS-H-elongata_contig18882:3728..3929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 3729..3929 -
1622930080.0038507-CDS-H-elongata_contig18882:4186..43241622930080.0038507-CDS-H-elongata_contig18882:4186..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 4187..4324 -
1691679272.9679286-CDS-H-elongata_contig18882:4186..43241691679272.9679286-CDS-H-elongata_contig18882:4186..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18882 4187..4324 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18882.5181.1prot_H-elongata_contig18882.5181.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18882 1985..4324 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18882.5181.1

>prot_H-elongata_contig18882.5181.1 ID=prot_H-elongata_contig18882.5181.1|Name=mRNA_H-elongata_contig18882.5181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=518bp
MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHV
STLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSA
GYGLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKR
ASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPP
LAAGLLRPDANSDAGGYAGGVQSQWGLRDISKMRWPAWGQRPDGISDAAT
GAENDAAAGLGRYRSSAKPPSGGGGMPPGRAVGPFGDGAGASRSSPSSTS
RLFGDAEGTAAEERQARSWRSPGDTGITGLHTSVWPLGGNPGGAGSRESS
DWMPDMLIGGGKSSSSAPDAASRWAPSSQPSSAGSHTTTPTGRHPVAPPE
WLTGAGARDSRETRGLISGKSAMARDRPNATGGVLLGDGEAERSKVGEER
FGERHSSVKETTGTFGSRQRNGKTPEGPLSSPFGELGYGGAATRPFAGSA
FGEAVAVDEEDEENPFA*
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mRNA from alignment at H-elongata_contig18882:1495..6137-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18882.5181.1 ID=mRNA_H-elongata_contig18882.5181.1|Name=mRNA_H-elongata_contig18882.5181.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4643bp|location=Sequence derived from alignment at H-elongata_contig18882:1495..6137- (Himanthalia elongata Himel1 dioecious)
GGAAGGGACTGGCGGGGTTTTCGTACGAGTGCGAGCTGAACGGGAGGCTT
GTATTGGACACCACTTCGGTTGTGCAGGTGACTTATTAAATTGGAGGGTG
TACTGTACAAGTTATATATTTATCTTCCCACCGTTAATAGTGCTTCATCC
ACTTCGGGCGCTTTCAGCGCCATTGCTTTCTTTCCTGTGAGGTCGGTAGT
TTTGTTTGGGCTAAAGACGGTGAATGCCAGGCATGAAATGAATATTTCGT
GCTGCCGCGTCCGCTTACCCCGTCCCGAAAACGCTTCACTCGCAGAACAC
CGATTACGATTATGAGGTTTCGATCCCCGCGTCAGTAGACATCGGCAGCA
GAGTCAGCGGGGTTACGTGGTACGAGGTTCACTCGAGGCGAAAGGCAGAT
GGGAAGGGCACGCTGGTGAGCCAGGCCAGGCCGCCTCTCGTGCTATTGTG
ACCCTAATTAATCGGAGCTCGTTACCGTGATAGGATTAAAACCCGCACGA
TTGATTTTATATTTTTCTCACCGGCTGGCGCAGGACCGCGATACACGACG
AGGTGCCCTTTTCGAGAGTTTTTGAACTATGTATCGAGGGCGTCGAGGCT
TCTCCTTGGGGACCATAATCCACGCAGGCAAACAGGCGACGATGAGCCAA
CCTGTCAATACGTCGGAAGCCTTAGAGTGACAGAGAAGTGCCATATATTT
TGGAGAAAGCGAATCGCCCACATGAAGCAGGATCACGGGTTCTGATGCTG
ATTTAGTTCCCACCTAGCCTCAAATGTTTATTTTTACTGCTGCACGAACC
TTCCGAAAGATTCATCCCACCGTGTGCTGCTGAACAACAGCGAAGGCCAC
AGTTGCAACCCTCATTTGTTCTAGTTCGCGGGGCTTCTTGAACCCTCAAC
GTGACCAGGTGCACCGGAGGTTTCGAGATTTCTTTGCCCTGCACGAGCAG
GTGAGATCGAGGTGCTGAGTGGCTTCAGTGAGACGATTAGTCGTGGTGCT
GATGGTTGTTGCTTTCCCTTGATTCATACCGCCCTTCAAACCGTCATGCC
CGCTCTACCCATGGTGGGTATGGAAAAATAGAGGTGTACATTACTTGGCC
CATGGGGTTACCTGAATAGGCTGCACCCGTTACTCAAGTTACCTTGAGGG
CTATTGGCTCAGTGCCGGCGGACTCTCGGTTGTAAACGCCATCAGTACGC
AATTGCGTGACCTGATGAAATCGGGATTGGCCCGATGGCANNNNNNNNNN
TGACGGTAGAGATGGACGCCGTCGCGGAAAACGGGAGAATCGAGAGGATC
CCGGGAGTAAGCACCAGATTCAGCCTGGGTTGGAAGAATGAGCAGGGACA
GGGCTACTGAACCTGTCTCGCGAGACCAAATTATCAGGCGCAAATGGGGA
CAGAGGAAAATTATTTTCCCTGTTCAGTTCACCACGAGCAGAAGGAAACC
AAATCCGGTTGATCCTTATGTCCGACCATACATACATGCACCCATGTTAG
TGCTCCTCACGATGGGACGGGCCGAAGCGGGTCCCCGCTTCAACGGTAGC
TCCGCTTGTCTCTACCCTCGAAGTATTGCTTATCGTCGCGAAACTCTATG
CGCGTGAGGTTATTTTAATGGACAGAGAGGGCATGCTGTGCGTCCATACC
CAAGAGAGGGCGAGAATCCTGTCAGAAAATATTCTGCGACGCATCATCGC
CCATGTAATTTTGTCGTCGATCAGTTCGCGGTCTTCCATATCGTTTCGTA
TTTTTCCCTTTCGACACACACGAACCTCGGCGCACGGCGTTTTCCCTCCA
GGTGGAATCGCTGATGAAGGGTCACCACTTGCGGTCTTCCTTGCCGCGGT
TCCCAGAGAAGAAATCGAAGCTGTGGACCAACCACGGTGATATGTCCTTT
GTCGAGCAACGTAGGCAAGCGTTGGAACTGTATGCCAAGACTCTTCTCCA
GGTGAGAGAAAAATCGATCTGTGCTCTCAAACCCCTTGAGCAGCGAGTTA
GAGATTGCGTGAACCCTTGAGTGCCAGCTGGGGCGAATATGTCACGTTTC
CGCGGCGGCGGTGGTTCTGTGTCACGCGCGCAAGTCAGTTCACAATTCCT
CGCTTTGGCTCGTTACTGGATCGTGGATTGGCAGCCCTCCGTAACCGCCG
TCCATGAGTATATCTTACCACTTTCCGATGTTTTCCGCTCGCGCAACCGT
GATAACAGCTGCCTCACGTGAGCACCCTCGATTCGACACGCGCATTCCTG
GGAATGGTGGGGAATCTCCGAGAATTTTCTATCGTCTGGGACGGCAAGGA
GCTGGGTATGACGTTGAAGCGCGCCTCGGGTATCGCCAATGAAAATCCGG
TCGGCGGGAGCTCCAGCGCCGGGTATGGGCTCGGACCTCCAGTGATCGCT
TCGATACAGGTGGATGCCTTTTGAAGCGTATGATCTCGCATAACCATCAC
CCTGCCGCCCGTAGTGGCTTTCATCTCGGGATTTACAGTCGCTTCTTGAA
GCACAGGGCGCGTTCTTGCGACGCGGCGTGGTGTATTTTTCCTGTTGCGG
TGTTACTGGAAACGATCTGCTTCCAAATAATAAGCTCTCCCAGTACATCC
TCTTCATTCCGTATATTCCCGACTCTTGTGACTCTTTGCCCATCCGCACC
AATGACTGCGTGCTATCTCGGGGTTTTTGTGGAGGACCTTGAAAAGGGTT
CCAAAAAGTCGCCCCCCGGAGTGAGTCCGGGGGACCGCCTCTTCAGAGTC
AACGGAGAACCGACGGAGTTCATGTCGCTGGAGGCCGCCTGGAGCTCATT
CAAACGCGCCTCGCGACCCGTCTTGCTGCACTTCTTCGGGCCGGTGAGAT
TTCCCCTACCCCCTGCGGGAGCGAGCATAGTGCTTCAGAAAAAAGGCGGA
ATCCGATCGGTGCGGCCTCGTTCTTCCAAAGTAACGCGCCTGGGGATATG
CTGTTATTCCCAATGACGTTGAAGTCGACGGCGCATTCTTTGATTCGCGT
GTGTTCGCGACCGTGCTACAAACACGCACACGACACAAACATACATGTCT
CGTTGCCTTTGTCGTTTCTTTGCTTCATTCACTAGATCATCCGCATGGAT
TCTACCTTGGCGCCACTCCCAGAAGCCTTCCTTCGTCGCAGGGGCCCCGA
AGGACGGAAAGGGAAGCCCTCGTTGAGTGGTGATGACGGCGGCCCGCCCC
TCGCGGCGGGTCTCTTAAGACCCGATGCCAACTCAGACGCAGGGGGCTAC
GCCGGCGGCGTGCAAAGTCAGTGGGGTCTGCGAGATATTTCGAAGATGCG
GTGGCCAGCGTGGGGACAACGACCAGATGGTATATCTGATGCCGCAACAG
GCGCCGAAAACGACGCCGCCGCTGGATTGGGAAGATATCGTTCGTCCGCA
AAGCCTCCCTCTGGCGGCGGTGGGATGCCTCCCGGCCGAGCAGTGGGACC
CTTCGGGGACGGTGCTGGGGCGTCGCGCAGCTCGCCGTCTTCCACTTCCC
GCCTCTTCGGTGACGCGGAGGGTACCGCAGCGGAAGAGCGTCAAGCGCGT
TCGTGGCGTTCTCCTGGAGACACGGGAATCACCGGGTTGCATACCTCGGT
CTGGCCGTTGGGCGGCAATCCAGGCGGGGCGGGCTCGAGGGAAAGCTCGG
ATTGGATGCCGGACATGTTGATCGGAGGAGGAAAATCGAGCAGCAGCGCT
CCCGATGCGGCATCGCGATGGGCGCCATCATCACAGCCGAGCAGTGCTGG
GTCGCACACGACCACCCCAACTGGGCGGCATCCTGTCGCGCCTCCCGAAT
GGCTAACAGGCGCGGGCGCACGTGATTCCAGAGAGACAAGAGGTTTGATC
TCGGGGAAGTCCGCGATGGCGCGCGATCGACCGAATGCCACGGGAGGCGT
CTTGCTCGGGGACGGCGAAGCCGAACGTAGTAAAGTTGGCGAGGAACGAT
TTGGTGAACGACATAGCTCGGTTAAGGAGACAACCGGGACGTTCGGGAGT
AGGCAGCGAAACGGTAAGACCCCTGAGGGTCCCCTGTCTTCTCCGTTCGG
TGAGCTTGGTTATGGTGGCGCGGCGACGCGTCCCTTCGCCGGAAGCGCCT
TCGGCGAAGCGGTGGCGGTAGACGAGGAGGACGAAGAGAACCCCTTCGCG
TAGTCGCCGCGCTGTTTCGAGAAGCATCTGTGTTTGCTGGATATCCACAG
ATTTGCCCCGCGTACTCTGGACACTCGTAAACATAAGTGCGGGAAGGTTT
GTGGTAATCTCAAGTGAAGATTTCCGTAGAGGCTTGCCGTGTTGCCTTGA
AATTTCCCTGAAGGAGTTGTACAAATCATGTCCAAGTGCCTCACGCACGC
GCGGCTGTGAATATGATTTTTTTGACGACGTTGTTGCCCTGCGGTTAAAT
TACCATACCTTCTGTATCCAAGATGATATTCAATAGATAATTTCTGGCGC
ACTCGTCTAAAAATATACGACCTGGTGCGTAACGGCACATTGGATCACAA
GCGTTATCTCGAAGCGCGTGGAGAGCGGCCCATCTGAGATTCGGCATATG
TATGGATTGAGCTCCCCCGCCACCTTCCCACAATTTTCTCGTTCATTGTT
GAGCTGACGCCCACTCACTTCAAGGCCGAATCTTTCTTTGGAT
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Coding sequence (CDS) from alignment at H-elongata_contig18882:1495..6137-

>mRNA_H-elongata_contig18882.5181.1 ID=mRNA_H-elongata_contig18882.5181.1|Name=mRNA_H-elongata_contig18882.5181.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3108bp|location=Sequence derived from alignment at H-elongata_contig18882:1495..6137- (Himanthalia elongata Himel1 dioecious)
ATGAAGGGTCACCACTTGCGGTCTTCCTTGCCGCGGTTCCCAGAGAAGAA
ATCGAAGCTGTGGACCAACCACGGTGATATGTCCTTTGTCGAGCAACGTA
GGCAAGCGTTGGAACTGTATGCCAAGACTCTTCTCCAGATGAAGGGTCAC
CACTTGCGGTCTTCCTTGCCGCGGTTCCCAGAGAAGAAATCGAAGCTGTG
GACCAACCACGGTGATATGTCCTTTGTCGAGCAACGTAGGCAAGCGTTGG
AACTGTATGCCAAGACTCTTCTCCAGCTGCCTCACGTGAGCACCCTCGAT
TCGACACGCGCATTCCTGGGAATGGTGGGGAATCTCCGAGAATTTTCTAT
CGTCTGGGACGGCAAGGAGCTGGGTATGACGTTGAAGCGCGCCTCGGGTA
TCGCCAATGAAAATCCGGTCGGCGGGAGCTCCAGCGCCGGGTATGGGCTC
GGACCTCCAGTGATCGCTTCGATACAGCTGCCTCACGTGAGCACCCTCGA
TTCGACACGCGCATTCCTGGGAATGGTGGGGAATCTCCGAGAATTTTCTA
TCGTCTGGGACGGCAAGGAGCTGGGTATGACGTTGAAGCGCGCCTCGGGT
ATCGCCAATGAAAATCCGGTCGGCGGGAGCTCCAGCGCCGGGTATGGGCT
CGGACCTCCAGTGATCGCTTCGATACAGGGTTCCAAAAAGTCGCCCCCCG
GAGTGAGTCCGGGGGACCGCCTCTTCAGAGTCAACGGAGAACCGACGGAG
TTCATGTCGCTGGAGGCCGCCTGGAGCTCATTCAAACGCGCCTCGCGACC
CGTCTTGCTGCACTTCTTCGGGCCGGGTTCCAAAAAGTCGCCCCCCGGAG
TGAGTCCGGGGGACCGCCTCTTCAGAGTCAACGGAGAACCGACGGAGTTC
ATGTCGCTGGAGGCCGCCTGGAGCTCATTCAAACGCGCCTCGCGACCCGT
CTTGCTGCACTTCTTCGGGCCGATCATCCGCATGGATTCTACCTTGGCGC
CACTCCCAGAAGCCTTCCTTCGTCGCAGGGGCCCCGAAGGACGGAAAGGG
AAGCCCTCGTTGAGTGGTGATGACGGCGGCCCGCCCCTCGCGGCGGGTCT
CTTAAGACCCGATGCCAACTCAGACGCAGGGGGCTACGCCGGCGGCGTGC
AAAGTCAGTGGGGTCTGCGAGATATTTCGAAGATGCGGTGGCCAGCGTGG
GGACAACGACCAGATGGTATATCTGATGCCGCAACAGGCGCCGAAAACGA
CGCCGCCGCTGGATTGGGAAGATATCGTTCGTCCGCAAAGCCTCCCTCTG
GCGGCGGTGGGATGCCTCCCGGCCGAGCAGTGGGACCCTTCGGGGACGGT
GCTGGGGCGTCGCGCAGCTCGCCGTCTTCCACTTCCCGCCTCTTCGGTGA
CGCGGAGGGTACCGCAGCGGAAGAGCGTCAAGCGCGTTCGTGGCGTTCTC
CTGGAGACACGGGAATCACCGGGTTGCATACCTCGGTCTGGCCGTTGGGC
GGCAATCCAGGCGGGGCGGGCTCGAGGGAAAGCTCGGATTGGATGCCGGA
CATGTTGATCGGAGGAGGAAAATCGAGCAGCAGCGCTCCCGATGCGGCAT
CGCGATGGGCGCCATCATCACAGCCGAGCAGTGCTGGGTCGCACACGACC
ACCCCAACTGGGCGGCATCCTGTCGCGCCTCCCGAATGGCTAACAGGCGC
GGGCGCACGTGATTCCAGAGAGACAAGAGGTTTGATCTCGGGGAAGTCCG
CGATGGCGCGCGATCGACCGAATGCCACGGGAGGCGTCTTGCTCGGGGAC
GGCGAAGCCGAACGTAGTAAAGTTGGCGAGGAACGATTTGGTGAACGACA
TAGCTCGGTTAAGGAGACAACCGGGACGTTCGGGAGTAGGCAGCGAAACG
GTAAGACCCCTGAGGGTCCCCTGTCTTCTCCGTTCGGTGAGCTTGGTTAT
GGTGGCGCGGCGACGCGTCCCTTCGCCGGAAGCGCCTTCGGCGAAGCGGT
GGCGGTAGACGAGGAGGACGAAGAGAACCCCTTCGCGTAGATCATCCGCA
TGGATTCTACCTTGGCGCCACTCCCAGAAGCCTTCCTTCGTCGCAGGGGC
CCCGAAGGACGGAAAGGGAAGCCCTCGTTGAGTGGTGATGACGGCGGCCC
GCCCCTCGCGGCGGGTCTCTTAAGACCCGATGCCAACTCAGACGCAGGGG
GCTACGCCGGCGGCGTGCAAAGTCAGTGGGGTCTGCGAGATATTTCGAAG
ATGCGGTGGCCAGCGTGGGGACAACGACCAGATGGTATATCTGATGCCGC
AACAGGCGCCGAAAACGACGCCGCCGCTGGATTGGGAAGATATCGTTCGT
CCGCAAAGCCTCCCTCTGGCGGCGGTGGGATGCCTCCCGGCCGAGCAGTG
GGACCCTTCGGGGACGGTGCTGGGGCGTCGCGCAGCTCGCCGTCTTCCAC
TTCCCGCCTCTTCGGTGACGCGGAGGGTACCGCAGCGGAAGAGCGTCAAG
CGCGTTCGTGGCGTTCTCCTGGAGACACGGGAATCACCGGGTTGCATACC
TCGGTCTGGCCGTTGGGCGGCAATCCAGGCGGGGCGGGCTCGAGGGAAAG
CTCGGATTGGATGCCGGACATGTTGATCGGAGGAGGAAAATCGAGCAGCA
GCGCTCCCGATGCGGCATCGCGATGGGCGCCATCATCACAGCCGAGCAGT
GCTGGGTCGCACACGACCACCCCAACTGGGCGGCATCCTGTCGCGCCTCC
CGAATGGCTAACAGGCGCGGGCGCACGTGATTCCAGAGAGACAAGAGGTT
TGATCTCGGGGAAGTCCGCGATGGCGCGCGATCGACCGAATGCCACGGGA
GGCGTCTTGCTCGGGGACGGCGAAGCCGAACGTAGTAAAGTTGGCGAGGA
ACGATTTGGTGAACGACATAGCTCGGTTAAGGAGACAACCGGGACGTTCG
GGAGTAGGCAGCGAAACGGTAAGACCCCTGAGGGTCCCCTGTCTTCTCCG
TTCGGTGAGCTTGGTTATGGTGGCGCGGCGACGCGTCCCTTCGCCGGAAG
CGCCTTCGGCGAAGCGGTGGCGGTAGACGAGGAGGACGAAGAGAACCCCT
TCGCGTAG
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