mRNA_H-elongata_contig1885.5158.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: D8LKM6_ECTSI (Enoyl-CoA hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM6_ECTSI) HSP 1 Score: 340 bits (872), Expect = 2.350e-114 Identity = 172/215 (80.00%), Postives = 200/215 (93.02%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFAL 666
P+ALNALNS LI+DIC AAE FE +P VGA+VLTG++RAFAAGADIKEMA+++F+EAYG++ FKE+ARL IRKP+IAAVNGYALGGGCE+AMMCDIILAG+KA FGQPEITLGVIPGWGGTQRL+RAVGKSKAMEM+LTG+Q+DA QAER+GLVA+VYP+E+LV++AVA+AAKI SMSLPVALMAKEA NAA+E TLAEG RLERRMFHS FAL
Sbjct: 58 PKALNALNSGLIQDICSAAEAFEGDPEVGAIVLTGSDRAFAAGADIKEMASLTFSEAYGENRFKEFARLTSIRKPIIAAVNGYALGGGCELAMMCDIILAGEKAMFGQPEITLGVIPGWGGTQRLIRAVGKSKAMEMVLTGNQIDAHQAEREGLVARVYPAEELVDQAVAIAAKIGSMSLPVALMAKEATNAAYEGTLAEGCRLERRMFHSCFAL 272
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A839N9P3_9MICO (Enoyl-CoA hydratase n=2 Tax=Flexivirga oryzae TaxID=1794944 RepID=A0A839N9P3_9MICO) HSP 1 Score: 290 bits (742), Expect = 3.850e-95 Identity = 143/214 (66.82%), Postives = 184/214 (85.98%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
P+ALNALNS ++ ++ AAE+ +++PGVGA+++TG+E+AFAAGADIKEMA+ +FA+ YG++LF W RL ++R P+IAAV GYALGGGCE+AM+CD+I+A D AKFGQPEITLGVIPG GG+QRL RAVGK+KAM+++LTG Q+ A +AER GLVA+V P+E L+ A +A KIASMSLP+A+MAK+AVNAAFE TLAEGVRLERR FH+AFA
Sbjct: 23 PKALNALNSEVMAEVVAAAEELDQDPGVGAIIITGSEKAFAAGADIKEMADKTFAQVYGENLFGAWERLTRVRTPLIAAVAGYALGGGCELAMLCDLIIAADTAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLVLTGRQMGADEAERSGLVARVVPAEGLLAAAKEVADKIASMSLPIAMMAKDAVNAAFETTLAEGVRLERRSFHAAFA 236
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A3M9MBG4_9MICO (Enoyl-CoA hydratase n=1 Tax=Flexivirga caeni TaxID=2294115 RepID=A0A3M9MBG4_9MICO) HSP 1 Score: 285 bits (729), Expect = 3.600e-93 Identity = 140/214 (65.42%), Postives = 180/214 (84.11%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
PQALNALNS ++ ++ AAE+ + +P +GA+VLTG++RAFAAGADIKEMA +FA+AYG DLF W RL ++R P+I AV GYALGGGCE+AM+CD+++A D AKFGQPEITLGVIPG GG+QRL RA+GK+KAM+++LTG Q+ A +AER GLV++V P EDL+ A +A +IASMSLP+A++AK+AVNAAFE TLAEG+RLERR FH+AFA
Sbjct: 23 PQALNALNSEMMIEVLAAAEELDRDPRIGAIVLTGSDRAFAAGADIKEMAQQTFAQAYGGDLFGAWERLARVRTPVIGAVAGYALGGGCELAMLCDLLIAADNAKFGQPEITLGVIPGMGGSQRLTRAIGKAKAMDLVLTGRQIGADEAERSGLVSRVVPLEDLLSTAREIAERIASMSLPIAMLAKDAVNAAFETTLAEGIRLERRSFHAAFA 236
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A835ZGP5_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP5_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.010e-92 Identity = 143/210 (68.10%), Postives = 173/210 (82.38%), Query Frame = 1
Query: 34 NALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
NAL + +I ++C A F+E+P VGA+V+TG ++ FAAGADI EM +SF++ Y QD FK+WA L ++RKP+IAAVNGYALGGGCE+AMMCDIILAGD AKFGQPEI LGVIPGWGGTQRLVRAVGKSKAMEM+LTGS +DA++A DGLV++V E +VE AVA+ KIASMS P LMAKEAVN+A+E TL EG+ +ERRMFHS FA
Sbjct: 58 NALCNGMIVELCTAVTAFDEDPAVGAIVITGGDKVFAAGADITEMVGLSFSDCYNQDKFKDWAALTRVRKPLIAAVNGYALGGGCELAMMCDIILAGDDAKFGQPEINLGVIPGWGGTQRLVRAVGKSKAMEMVLTGSMIDAKRANWDGLVSRVVEPEKVVETAVALGNKIASMSRPSVLMAKEAVNSAYELTLTEGLHVERRMFHSLFA 267
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A2D4CC62_PYTIN (Enoyl-CoA hydratase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC62_PYTIN) HSP 1 Score: 284 bits (727), Expect = 1.410e-92 Identity = 145/214 (67.76%), Postives = 178/214 (83.18%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
P+ALNAL + LI ++ GAA F+ N VGA+V+TG+++AFAAGADIKEMAN SF EAY ++F +W + K+ KP+IAAVNGYALGGGCE+AM+CD+I+AGDKAKFGQPEITLG IPG GGTQRL+RAVGKSKAMEMILTG+ +DA QAERDGLVA+V P++ L+EEA+ A KIAS S PV MAKEAVNAAFE +L EG++ E R+F S+FA
Sbjct: 43 PKALNALCTGLIHEVNGAAHAFDANEKVGAIVITGSDKAFAAGADIKEMANKSFVEAYKSNMFADWGDITKVTKPVIAAVNGYALGGGCELAMLCDMIIAGDKAKFGQPEITLGTIPGCGGTQRLIRAVGKSKAMEMILTGNMIDAHQAERDGLVARVVPADKLLEEALKTADKIASFSQPVVKMAKEAVNAAFEQSLQEGLKYESRLFWSSFA 256
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A839EFY1_9HYPH (Enoyl-CoA hydratase n=22 Tax=Bacteria TaxID=2 RepID=A0A839EFY1_9HYPH) HSP 1 Score: 280 bits (717), Expect = 2.300e-91 Identity = 140/215 (65.12%), Postives = 175/215 (81.40%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFAL 666
PQALNALNSAL+ ++ A EDFE++ +GA+V+TG+E+AFAAGADIKEM + FA+AY D F EW R+ ++RKP+IAAV GYALGGGCE+AMMCD I+A D AKFGQPEITLGV+PG GG+QRL R VGKSKAM++ LTG +DA +AER GLVA+V P+ +L+EEA+ A KIAS SLPV +M KE +N A+E TL+EG+R ERR+FHS FAL
Sbjct: 22 PQALNALNSALLAELSAALEDFEKDNRIGAVVITGSEKAFAAGADIKEMQTLEFADAYLSDYFSEWERVTRLRKPLIAAVAGYALGGGCELAMMCDFIIAADTAKFGQPEITLGVMPGMGGSQRLTRFVGKSKAMDLCLTGRMMDAVEAERSGLVARVVPAGELIEEALKAAKKIASFSLPVVMMTKETINRAYETTLSEGLRFERRVFHSMFAL 236
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A7Z0DAR6_9ACTN (Enoyl-CoA hydratase n=1 Tax=Naumannella cuiyingiana TaxID=1347891 RepID=A0A7Z0DAR6_9ACTN) HSP 1 Score: 279 bits (714), Expect = 7.240e-91 Identity = 140/214 (65.42%), Postives = 174/214 (81.31%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
P+ALNALN L++++ AA F+ +P VGA+V+TG+E+AFAAGADIKEM + SF++ YG DLF +W R+ KIRKP+IAAV GYALGGGCE+AMMCD+I+A D AKFGQPEI LGVIPG GGTQRL RAVGKSKAM+++LTG +DA +AER GLVA++ P+ +LV+ AVA+A I + SLPV +MAKEAVN A E TL+EGVR ERR F S FA
Sbjct: 25 PKALNALNRDLMEEVIAAARAFDTDPAVGAIVITGSEKAFAAGADIKEMQSRSFSDVYGGDLFSDWDRITKIRKPIIAAVAGYALGGGCELAMMCDLIIAADSAKFGQPEINLGVIPGMGGTQRLTRAVGKSKAMDLVLTGRMMDAEEAERSGLVARIVPAAELVDAAVAVAETIGAKSLPVVMMAKEAVNVALETTLSEGVRFERRTFFSTFA 238
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A1M2YY52_9HYPH (Enoyl-CoA hydratase n=1 Tax=Rhizobiales bacterium 65-79 TaxID=1895815 RepID=A0A1M2YY52_9HYPH) HSP 1 Score: 279 bits (713), Expect = 9.290e-91 Identity = 141/215 (65.58%), Postives = 171/215 (79.53%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFAL 666
P+ALNALNS ++ ++ A FE +PG+GA+V+TG+E+AFAAGADIKEM SFAEAY +D F W L +IRKP++AAV GYALGGGCE+AMMCD ILA D AKFGQPEITLGV+PG GG+QRL R VGKSKAM+M LTG +DA +AER GLV++V P+ DL+EEAV A KIA SLP +M KEAVN A+E TL+EG+R ERR+FHS FAL
Sbjct: 22 PKALNALNSTVLAEVLAALNAFEADPGIGAIVITGSEKAFAAGADIKEMQPKSFAEAYMEDFFAGWEGLTRIRKPIVAAVAGYALGGGCELAMMCDFILAADSAKFGQPEITLGVMPGMGGSQRLTRFVGKSKAMDMCLTGRMMDAGEAERSGLVSRVVPAADLIEEAVKTAEKIAGFSLPAVMMVKEAVNRAYETTLSEGLRFERRVFHSMFAL 236
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A839U037_9HYPH (Enoyl-CoA hydratase n=3 Tax=Phyllobacterium TaxID=28100 RepID=A0A839U037_9HYPH) HSP 1 Score: 278 bits (712), Expect = 1.320e-90 Identity = 138/215 (64.19%), Postives = 176/215 (81.86%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFAL 666
P+ALNALNSAL+ ++ A E F+++ +GA+VLTG+E+AFAAGADIKEM + FA+AY D F EW R+ ++RKP+IAAV GYALGGGCE+AMMCD I+A D AKFGQPEITLGV+PG GG+QRL R VGKSK+M+M LTG +DA +AER GLV++V P+ +L++EA+ +AAKIAS SLPV +M KE +N A+E TLAEG+R ERR+FHS FAL
Sbjct: 22 PKALNALNSALLAELAEALEAFDKDNTIGAIVLTGSEKAFAAGADIKEMQTLEFADAYLGDYFSEWERVTRLRKPLIAAVAGYALGGGCELAMMCDFIIAADNAKFGQPEITLGVMPGMGGSQRLTRFVGKSKSMDMCLTGRMMDANEAERSGLVSRVVPANELIDEAMKVAAKIASFSLPVVMMTKETINRAYETTLAEGLRFERRVFHSMFAL 236
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Match: A0A5D6XQI8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQI8_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.360e-90 Identity = 141/214 (65.89%), Postives = 177/214 (82.71%), Query Frame = 1
Query: 22 PQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGADIKEMANVSFAEAYGQDLFKEWARLEKIRKPMIAAVNGYALGGGCEIAMMCDIILAGDKAKFGQPEITLGVIPGWGGTQRLVRAVGKSKAMEMILTGSQLDARQAERDGLVAKVYPSEDLVEEAVAMAAKIASMSLPVALMAKEAVNAAFENTLAEGVRLERRMFHSAFA 663
P+ALNAL S LI+++ GAA+ F+ + +GA+++TG+++AFAAGADIKEMA F +AY ++F W + KI KP+IAAVNGYALGGGCE+AM+CD+I+AGDKAKFGQPEITLG IPG GGTQRL+RAVGK+KAMEMILTG+ +DA QAERDGLVA+V P++ L+EEA+ A KIAS S PV MAKEAVNA+FE +L EGVR E R+F S+FA
Sbjct: 44 PKALNALCSPLIEELNGAAQAFDADENIGAIIVTGSDKAFAAGADIKEMAEKQFVDAYKSNMFANWGDITKISKPVIAAVNGYALGGGCELAMLCDLIIAGDKAKFGQPEITLGTIPGCGGTQRLIRAVGKAKAMEMILTGNMIDAHQAERDGLVARVVPADKLLEEALKTADKIASFSQPVVKMAKEAVNASFEQSLQEGVRFESRLFWSSFA 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1885.5158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1885.5158.1 >prot_H-elongata_contig1885.5158.1 ID=prot_H-elongata_contig1885.5158.1|Name=mRNA_H-elongata_contig1885.5158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp MQRNSRVPQALNALNSALIKDICGAAEDFEENPGVGALVLTGNERAFAAGback to top mRNA from alignment at H-elongata_contig1885:3246..6308+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1885.5158.1 ID=mRNA_H-elongata_contig1885.5158.1|Name=mRNA_H-elongata_contig1885.5158.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3063bp|location=Sequence derived from alignment at H-elongata_contig1885:3246..6308+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1885:3246..6308+ >mRNA_H-elongata_contig1885.5158.1 ID=mRNA_H-elongata_contig1885.5158.1|Name=mRNA_H-elongata_contig1885.5158.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1644bp|location=Sequence derived from alignment at H-elongata_contig1885:3246..6308+ (Himanthalia elongata Himel1 dioecious)back to top |