mRNA_H-elongata_contig1868.5086.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A6H5JCS1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCS1_9PHAE) HSP 1 Score: 1008 bits (2606), Expect = 0.000e+0 Identity = 525/677 (77.55%), Postives = 589/677 (87.00%), Query Frame = 1
Query: 1 SQIVTGTQQLLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSANILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEA--SPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEG-AQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEIQ 2022
+ +VTGT Q+LVADGL NTFDG RFQFEDLQL VC+GQKLGLVGINGCGKSTLLKVLGK+E+CD+G+IESPKATVVTYVEQDP+F G+TV+DAV+ ADN LMRAVR YQ ATEA+E AG+ P++LE AM RFE+AT+ MD VGGWD ET+AQQVM+RL VM L+ V NLSGGQRKRVALAAAL+QKPDVLLLDEPTNHLDV+AIEWLE+LLAER LTFVCVTHDRYFLENVCQEIIELD+AKLYRYPG+YERFLELKE+RMNAEGAAR+ ARNK+RGELAWMRKQPKARQAKSKAR+ERFFELK KAAAPAG++DKGLTLSS T RLGKTVVYLKGASLKFSA ILD FAYEFD+GDRIGIVGGNGVGKTTFLNVLMGKQ LDSGEV TG TVRYGYYEQGGLA+MD D RVMELVEDTCA +EV E D EPV PQVQARRLLNLFQFP ARWNDRVGRLSGGEKRRLQLL+VLAT+PNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFF+DKVAKHLF+FEGDGVVRDFQGTFTEYLDYR+D MKP GG K +++A+ +A +P P + +KMSNK+R+EF++LE+ I++L ER +EL+ LL A+ AGY E+ WMEE A+IE ETETKT+RWLELA+++
Sbjct: 89 ANVVTGTPQVLVADGLTNTFDGARFQFEDLQLTVCRGQKLGLVGINGCGKSTLLKVLGKKESCDSGTIESPKATVVTYVEQDPEFPAGSTVKDAVYGADNPLMRAVRAYQQATEAIEGAGADPDALEKAMDRFEKATATMDRVGGWDVETYAQQVMSRLGVMSLEGSQVVNLSGGQRKRVALAAALVQKPDVLLLDEPTNHLDVEAIEWLERLLAERSLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGSYERFLELKEERMNAEGAARDRARNKLRGELAWMRKQPKARQAKSKAREERFFELKTKAAAPAGASDKGLTLSSKTQRLGKTVVYLKGASLKFSAKILDNFAYEFDRGDRIGIVGGNGVGKTTFLNVLMGKQLLDSGEVVTGGTVRYGYYEQGGLADMDDDVRVMELVEDTCAGAEVGE-DEEPVPPQVQARRLLNLFQFPAARWNDRVGRLSGGEKRRLQLLKVLATNPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFVDKVAKHLFLFEGDGVVRDFQGTFTEYLDYRQDFMKPGTGGXXXXXXXXXKLEAEEAAQNKGSSQAVDAPTPXXXXXQKKTKKMSNKQRFEFSNLEKDIESLGERGRELDALLAAEAENPSAGYDEIAAWMEEQARIELETETKTERWLELADLE 764
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A836CLI0_9STRA (ABC transporter related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI0_9STRA) HSP 1 Score: 701 bits (1808), Expect = 3.810e-243 Identity = 381/680 (56.03%), Postives = 482/680 (70.88%), Query Frame = 1
Query: 1 SQIVTGTQQLLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSA--NILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKP-----AAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
S++VTGT +LL +GL NTFDGTRFQF+ + L VC+GQKLGLVG+NGCGKST+LKV+G RE D+G+I +P T V YV+Q+P F GATV +AV+A++ +MR +REY+ AT AV PE A RFERA +AM+ WDAE A Q+M+RLRV L+ V LSGG++KRVALAAAL+Q PDVLLLDEPTNHLDV+AIEWLE LL++R LTFV VTHDR+FLENVCQEI+ELD+ +YRYPG+Y ++LE K DR+ EG + A+NK+R EL W+RKQP+ARQAKSK+R E FF LK K PA + + + +TRLG +V+ + ASL FSA ILDEF+Y+F++GDR+G+VG NGVGKTTFLNVL +Q LDSG V GETVR+GYY+Q GL ++ + +RV++LVED CA DT PQ AR+LL F FP ARWND V RLSGGE+RRLQLLQVLA +PNFLVLDEPTNDLDI +L +LE+FLLNDYKGCL+IVSHDRFFMD+VAK LF+FEG+GVVR+F+G+F++YLD+RR K AA +K K+S KE+ E+ LE I+ R EL+ LL+G+ +GAGYS++ EW EL K+ E + KT+RW+ELAE+
Sbjct: 10 SKVVTGTDRLLWVEGLSNTFDGTRFQFKGVDLTVCRGQKLGLVGVNGCGKSTILKVMGGREDADSGTISAPGRTRVVYVDQEPVFPPGATVLEAVYASEAPMMRTLREYEEATAAVT---EHPEDA-AANTRFERAMAAMERENAWDAEGRAAQIMSRLRVDGLRAQSVDRLSGGEKKRVALAAALVQAPDVLLLDEPTNHLDVEAIEWLEDLLSDRALTFVLVTHDRWFLENVCQEILELDTGLMYRYPGSYAKYLEAKADRLRVEGQEQANAKNKLRHELEWVRKQPRARQAKSKSRVESFFALKKKVDNPARGAQGSVAIEAASTRLGTSVLKFEDASLAFSAAKRILDEFSYDFERGDRVGVVGANGVGKTTFLNVLTLRQTLDSGTVTVGETVRFGYYKQQGLEDVPEGQRVLQLVEDICAGVPRAPDDTSTPNPQAAARQLLKRFNFPAARWNDFVSRLSGGERRRLQLLQVLAAAPNFLVLDEPTNDLDIPTLSVLEEFLLNDYKGCLIIVSHDRFFMDRVAKRLFVFEGEGVVREFRGSFSDYLDHRRSMEKEHDVATAAXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXKKVKLSYKEKREYEGLEAEIERCGARQGELQALLDGSHGSGAGYSDIAEWSAELTKLAAEVDAKTERWMELAEM 677
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: W7TJ57_9STRA (Abc transporter atp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ57_9STRA) HSP 1 Score: 585 bits (1508), Expect = 2.660e-197 Identity = 332/687 (48.33%), Postives = 441/687 (64.19%), Query Frame = 1
Query: 13 TGTQQLLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNT-LMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQ-EIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSA---NILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADT-------------EPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
T + +L GL NTFDG R+QF+DL L + KGQK+GLVG+NGCGKSTLL+ +G E ++G IE+ K V YV+Q+P F G V+D +F+ + M AV YQ A+EA+ A G+ E A +F+ A+ MD GGW+AET A Q+ +L V+DLQD V LSGGQRKR+ LA AL++KPDV+LLDEP+NHLD+DAIEWLE LA R +T + VTHDRYFLE VCQ E+ EL+ A LYR+ GNYE FLE KE R++++ +AR K++ ELAWMRKQP+ARQAKSK+RQ + EL K A K L+L + +RLG V+ AS +F IL F YEF KGDR+GIVG NG GK+TFL++L+G+ PLDSGEV GETVR+GYY Q G+ + R+ME V+ T + E T ++ + AR+LL FQFPT+RW D VG+LSGGE+RRLQL+ VLA PNFL+LDEP+NDLD+ +L +LE+FLL +YKG LV VSHDR F+D++A HLF F+GDG+VRDFQG+F+++L+ ++ + G + DA S R++S KE+ E +E+AI L ++ E + L+ + AG+S++ EW L KIE E K DRWLEL E+
Sbjct: 56 TNAETVLWLRGLSNTFDGQRYQFKDLSLSLAKGQKVGLVGVNGCGKSTLLRCIGGVEKAESGEIETLKGLTVVYVDQEPTFPPGLKVKDVMFSPSGSPAMAAVWAYQKASEAL-ATGT-----EEAYDKFQEASQRMDVTGGWEAETIANQIFTQLNVVDLQDKDVDTLSGGQRKRLGLATALVRKPDVILLDEPSNHLDIDAIEWLEAHLANRAVTAIVVTHDRYFLETVCQSEVWELEDAALYRHTGNYESFLEAKEVRLSSQASARANDLKKLQKELAWMRKQPRARQAKSKSRQGAYHELVKKTAKK--EEVKSLSLEAAKSRLGSFVLAFDDASFRFQKADKQILTSFTYEFTKGDRVGIVGPNGAGKSTFLSILLGELPLDSGEVVQGETVRFGYYAQAGM-DFPDGVRLMEYVKQTAEDALAKEGSTVRTDEQGNISIQGPKLSGEALARQLLVRFQFPTSRWQDLVGKLSGGERRRLQLMWVLAQRPNFLILDEPSNDLDLSTLAVLEEFLLEEYKGVLVFVSHDRRFVDRLAGHLFAFQGDGIVRDFQGSFSDWLEMEKEAKAHGGSAWQDSTLGGTRKGQSDAKTAAS-----------------RRLSGKEKKELGGMEQAIGTLQKQAAEYQSKLDEGHKTNAGFSQLAEWASRLEKIEAEIAAKEDRWLELMEL 716
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A4D9CRB9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRB9_9STRA) HSP 1 Score: 587 bits (1512), Expect = 1.760e-191 Identity = 332/687 (48.33%), Postives = 443/687 (64.48%), Query Frame = 1
Query: 13 TGTQQLLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNT-LMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQ-EIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSA---NILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADT-------------EPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
T T+ +L GL NTFDG R+QF+DL L + KGQK+GLVG+NGCGKSTLL+ +G E ++G IE+ K V YV+Q+P F G V+D +F+ + M AV YQ A+EA+ A G+ E A +F+ A+ MD GGW+AET A Q+ +L V+DLQD V LSGGQRKR+ LA AL++KPDV+LLDEP+NHLD+DAIEWLE LA R +T + VTHDRYFLE VCQ E+ EL+ A LYR+ GNYE FLE KE R++++ +AR K++ ELAWMRKQP+ARQAKSK+RQ + EL K A K L+L + +RLG V+ AS +F IL F YEF KGDR+GIVG NG GK+TFL++L+G+ PLDSGEV GETVR+GYY Q G+ + R+ME V+ T + E T ++ + AR+LL FQFPT+RW D VG+LSGGE+RRLQL+ VLA PNFL+LDEP+NDLD+ +L +LE+FLL +Y+G LV VSHDR F+D++A HLF F+GDG+VRDFQG+F+++L+ ++ +N+ + DA S R++S KE+ E +E+AI L ++ E + L+ + AG+S++ EW L KIE E K DRWLEL E+
Sbjct: 567 TNTETVLWLRGLSNTFDGQRYQFKDLSLSLAKGQKVGLVGVNGCGKSTLLRCIGGVEKAESGEIETLKGLTVVYVDQEPTFTPGLKVKDVMFSPSGSPAMAAVWAYQKASEAL-ATGT-----EEAYDKFQEASQRMDVTGGWEAETIANQIFTQLNVVDLQDKDVDTLSGGQRKRLGLATALVRKPDVILLDEPSNHLDIDAIEWLEAHLANRAVTAIVVTHDRYFLETVCQSEVWELEDAALYRHTGNYESFLEAKEVRLSSQASARANDLKKLQKELAWMRKQPRARQAKSKSRQGAYHELVKKTAKK--EEVKSLSLDAAKSRLGSFVLAFDDASFRFQKADKQILTSFTYEFTKGDRVGIVGPNGAGKSTFLSILLGELPLDSGEVVQGETVRFGYYAQAGM-DFPDGVRLMEYVKQTAEDALAKEGSTVRTDEQGNISIQGPKLSGEALARQLLTRFQFPTSRWQDLVGKLSGGERRRLQLMWVLAQRPNFLILDEPSNDLDLSTLAVLEEFLLEEYQGVLVFVSHDRRFVDRLAGHLFAFQGDGIVRDFQGSFSDWLEMEKEAKAQGGSAWQDSNSGETRKGQSDAKMAAS-----------------RRLSGKEKKELGGMEQAIGTLQKQAAEYQSKLDEGHKNNAGFSQLAEWASRLEKIEAEIAAKEDRWLELMEL 1227
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A7S3Y1P4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P4_HETAK) HSP 1 Score: 564 bits (1453), Expect = 2.310e-188 Identity = 323/669 (48.28%), Postives = 432/669 (64.57%), Query Frame = 1
Query: 28 LLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLL-AERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFS--ANILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGL--ANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
++ +GL NTFDG RFQF + L + KG+KLGL+G+NG GKS+LLK D G I+S K V YV+Q+P F +G TV++AVF +D +M A+R+Y + +E+ + P + + FE+AT ++S+GGW+ E ++++L V L D V LSGG+ KR+AL L++KPDVLLLDEPTNHLDV+AIEW+E L+ A + + + VTHDR FLENV EI+ELD A+LYRYPG Y ++LE + R+ E A + RNK+R EL W+R+QP+ RQAKSK+R E + ++ KA + N G+ L S RLG ++ KGA+L+F IL +F YEF K DRIGIVGGNGVGKTTFLNVL Q LDSGE GETV +GYY Q GL +D KRV+E V++ + LE D E PQ R+ L FQFP RW +RV LSGGE+RRLQLL VL +PNFLVLDEPTNDLD+ +L LE+FL +Y+GC+++VSHDR FMD+V HLF+FEGDGVVRD+ G+FT YL+ ++ + S+ + + + S + + V D + K+++S KER E+ LEE I+ LS++ ELE LE A E G GYSE+ E L + E K +RWLELAEI
Sbjct: 113 IIWCEGLSNTFDGERFQFRGIDLGIHKGEKLGLIGLNGAGKSSLLKAFAGELKPDEGKIDSVKNARVVYVKQEPKFEQGKTVKEAVFESDIPVMVALRKYYELSARLESGDTDPSTQKA----FEKATEKVESLGGWEVEATVATILSKLNVYHLMDQKVDGLSGGELKRLALGIGLVEKPDVLLLDEPTNHLDVEAIEWVEDLVRANKDMACLVVTHDRLFLENVADEIVELDRAQLYRYPGAYNKYLEARAARLATEDAEHASLRNKLRRELEWVRRQPQGRQAKSKSRVEAYEKMNEKAKSRE-LNGSGVKLESQKQRLGNMIMQFKGANLQFQDGKTILKDFTYEFSKNDRIGIVGGNGVGKTTFLNVLTQTQSLDSGEALVGETVAFGYYNQKGLEAGPIDTSKRVIEFVQEIVENNR-LETDKEN--PQSTTRKYLEKFQFPRNRWQERVEALSGGERRRLQLLSVLCKNPNFLVLDEPTNDLDLQTLGALEEFLTTEYQGCVILVSHDRLFMDRVTDHLFVFEGDGVVRDYVGSFTGYLEEKKADEEALY----------LDSSKSETTKQSSLQQTTSHTVSDEAVEEKKQLSYKERKEYKGLEENIEKLSKKQIELEAELEKAGEDGKGYSELMEIQARLDAVVAEVAEKEERWLELAEI 763
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A5J4YH10_PORPP (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YH10_PORPP) HSP 1 Score: 507 bits (1305), Expect = 1.890e-166 Identity = 303/680 (44.56%), Postives = 425/680 (62.50%), Query Frame = 1
Query: 28 LLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKP----------ESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFEL-KAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSAN-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQ-DKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMK---PAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
L+ A GL ++DG R Q +++ + +G K+G+VG NGCGKSTLL++L E+ DAGS + K T V V Q+ F T+ + +F A+ +RA+REY+ +E A + + + ER T MD++ WD E FA+QV++RL ++D++ V +LSGG+RKR+ALAAALI++P++L+LDEPTNHLD+D I WLE+ L L+ V VTHDR FL++VC I ELD LY +PG+YE FLE K+ RM+A+ AR ++R EL WMR+QPKARQAKSK+R E F+ L K +AA G D L LS +R+G V+ ++ L F ILD F+YEF KGDR+G+VG +G+GK+ FL VL Q DSG V GET+++GYYEQGG+ D+ D+RV+E V +EV++ + A +LL FQF A+W + RLSGGEKRRLQL++VLA PNFLVLDEP+NDLD+ +L+ LEDFL +++ G LV+VSHDR FMD++ H+F+F+GDGVVRDF GTFT+YL R++ K + G G + +E+++ + A K K+S ER E+ ++ ID L E R+ E E Y+E+ E EELA++E + KT+RW+ELAE+
Sbjct: 87 LIEATGLSKSYDGERVQLDNVSFQIARGAKVGVVGQNGCGKSTLLRILAGTESPDAGSFWTRKGTAVAIVGQEEQFDPSLTISELLFRANTESVRALREYETIARKLERAAQSSAIDDPSAEHADEMARLTTQLERCTVKMDALNAWDLEAFARQVLSRLGIVDMER-KVGSLSGGERKRIALAAALIERPELLILDEPTNHLDIDRITWLEEYLQNPALSVVVVTHDRQFLDSVCTSIYELDYGSLYTHPGSYEAFLENKDARMDAQEKLAQDARVRLRKELEWMRRQPKARQAKSKSRIENFYNLQKQEAAGARGRAD--LQLSVQVSRMGTMVLNMEDVCLSFGQKKILDHFSYEFQKGDRVGVVGRSGIGKSAFLRVLAQLQKPDSGVVTIGETIKFGYYEQGGIEIPDEKDQRVIEWV------TEVMQRAGNA---DMSAIQLLERFQFDKAQWYTFIDRLSGGEKRRLQLMKVLAEKPNFLVLDEPSNDLDLQTLETLEDFL-SEFDGVLVVVSHDRIFMDRLTNHIFVFQGDGVVRDFTGTFTDYLLLVREEEKLQNKLSFGAGLXXXXXXQRV-------AAEEKSGSKQAKTAQKTVKTKLSYNERREYGKIQGEIDKLQETHA---RVNEQLLEPSLRYTELAELSEELARVEALIDAKTERWMELAEL 743
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A7Y5LE56_9BACT (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7Y5LE56_9BACT) HSP 1 Score: 493 bits (1270), Expect = 6.880e-163 Identity = 298/667 (44.68%), Postives = 412/667 (61.77%), Query Frame = 1
Query: 28 LLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSAN-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAP--QVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
LL + L +F G + F DL + +GQK L+ NG GKSTLL++L ++ D GSI + K + Y+EQ+P F E T+ + +FAA +RA++EY++A +E +G P + R +A AM+ WD E +Q++ LR+ L PVA LSGGQRKR+ALA L+++PD+L+LDEPTNHLD+D IEWLE+ +A +T + VTHDRYFL+ VC EI+ELD L+ Y GNY FLE K +R E + RN +R EL WMR+QPKAR KSKAR + F+EL+ KAA + ++ L L+ R+G ++ LK S ++ IL F Y F KG+RIGIVGGNGVGKTTFLN+L+ ++ +DSG++ GET+ +GYY Q GL +++DKRV+++V + AD P+A +V A + LNLFQFP V +LSGGEKRRL LL VL +PNFL+LDEPTNDLD+L+L ILE+FL N ++GCL++VSHDR+FMDK+ HLFIFEGDGV++DF G + EY + + D + VSE P ++ + K K+S KE+ EF L + I+ L + KELE L G + Y + EW E L + E + K+ RWLEL+E+
Sbjct: 3 LLSVESLSKSF-GVKTLFRDLSFGIEEGQKTALIARNGAGKSTLLRILTGNDSPDTGSIVTRKNISIGYLEQEPVFDESLTIVETLFAASTPALRAIKEYELA---LELSGENPSEIN--QQRLAKAMEAMEHERAWDYEYRIKQIITHLRIAHLTQ-PVAALSGGQRKRLALARVLLEEPDLLILDEPTNHLDLDMIEWLEQYIARPKITLLLVTHDRYFLDRVCGEIVELDRGVLFAYHGNYSYFLEKKSEREFVEERELDHTRNILRRELDWMRRQPKARTTKSKARSDAFYELEEKAAGQ--TPEQKLQLNVKMNRIGGKILELKKISKRYGDTVILKGFDYTFKKGERIGIVGGNGVGKTTFLNLLVQRESVDSGKINVGETIVFGYYSQQGL-KVNEDKRVIDIVREI--------ADVIPLADGVKVSASQFLNLFQFPPDMQYTPVSKLSGGEKRRLYLLTVLVKNPNFLILDEPTNDLDLLTLNILEEFLSN-FEGCLLVVSHDRYFMDKLVDHLFIFEGDGVIKDFNGRYAEYRHHIAGE--------------------DSETKMVSE---KPTHIKTSV---KTKLSYKEKNEFEKLGKEIETLEKEKKELELQLNGG---SSDYKALQEWSERLHAVTEMLDQKSTRWLELSEL 621
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A7S3Z6I8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z6I8_9EUKA) HSP 1 Score: 484 bits (1247), Expect = 3.770e-159 Identity = 281/666 (42.19%), Postives = 406/666 (60.96%), Query Frame = 1
Query: 28 LLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIP-VANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFS-ANILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
LL D L T DG +QF D+ L V +G+++GL+G NGCGKSTL+++L ++ D G + K +VV YV+Q+P EG TV DA++ D+ + +A++++Q A+ V + PE+L E AT MD V WD E A++++ L + D+ + ++SGGQRKRVALAA+L+ KPD+LLLDEPTNHLDV IEWLE++L + + +THDRYFLE C +I ELD LY +PG Y +++ K R+ E + A+ +R E WMR+ PKAR KS+AR +RF+EL+ A + + + L + + TRLG V+ ++ A K IL +F+++F KGDRIGIVG NG GK+T LN++ G+ LD+G GETV+ GYY+Q G D ++++ + ++++ + + Q A L++ F+FP R V RLSGGEKRRLQLL VLAT PN L+LDEPTNDLDI SL LE+FLL D+ G LV+VSHDR FMD+V L + GDG V++F GTF+EY++ +R K G A + + +++ A P P RK++ E+ E+ LE+ +D L+ + ELE ++ A AG Y + ++LA ++ E E KTDRWL+LAEI
Sbjct: 7 LLWGDSLSKTHDGEVYQFRDIDLTVSRGERVGLIGTNGCGKSTLMRILSGTDSPDKGECRTRKGSVVAYVDQNPMLPEG-TVMDAIYQGDSQVSKALKQFQAASARV-SMDPTPEALRA----LEAATEVMDRVDAWDVEAMAKKILQNL-LPDMDPMSSTKSMSGGQRKRVALAASLVSKPDLLLLDEPTNHLDVQCIEWLEEVLEDTSSGMILITHDRYFLERTCDKIFELDDGALYSHPGTYSSYVDAKHQRLAEEQTIVDNAKRALRKETEWMRRMPKARSTKSQARIDRFYELQKVANSKSNKDTSKLQIEAQKTRLGGKVIRMENADFKRGDKTILKDFSFDFQKGDRIGIVGDNGAGKSTLLNLIAGELKLDNGHYDKGETVKIGYYKQQGF---DAIEKLLSM--------KMVDVVADVTSNQQDALTLMDKFKFPRRRAFTPVSRLSGGEKRRLQLLTVLATQPNVLMLDEPTNDLDIDSLTKLEEFLLEDFSGVLVVVSHDRAFMDRVVNRLLVLTGDGNVKEFMGTFSEYVEMQRMVKKDKQG-------AVRQEKQEKRQIAEAKNNAEPKP---------RKLTYMEKKEYQGLEDVLDELTNKKSELEAQIDLAMSAGKDYQDYAAMTQQLADLDAELELKTDRWLQLAEI 638
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: UPI0019095AC0 (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=Adhaeribacter terrigena TaxID=2793070 RepID=UPI0019095AC0) HSP 1 Score: 479 bits (1234), Expect = 2.020e-157 Identity = 286/652 (43.87%), Postives = 403/652 (61.81%), Query Frame = 1
Query: 70 RFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDF-GEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRVMDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSAN-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIEEETETKTDRWLELAEI 2019
R+ F+DL + +GQ++GLVG+NG GK+TLL++L D+GS+ + +V Y+ Q+P F E A+V+DA+F+ N + A+REY+ E P+ M +RA M + WD E +Q++ +L + DL + LSGGQRKRVA+A LI +PD+L+LDEPTNHLD+D IEWLE LL+ + T + VTHDRYFL+ V EI ELD ++Y Y GNY FLE K +R GA + ARN MR EL WMR+QPKAR KSK+R + F+E K KAA A GL LS TTR G ++ + S F ++D+F+Y F K DRIGI+G NG+GK+T LN+L GK DSGE+ G+T +GYY Q L +D+RV+++V++ E + +T + A + L FQFP A+ VG+LSGGEKRRLQLL+VL +PNFL+LDEPTNDLDI++L ILEDFLLN + GCL+IVSHDR+FMD++ H F+FEG+G +R+F G +T+Y ++ ++Q K S SD+ P+ + + P D + KRK S KE+ E+ LE+ ID L + +L L G + ++ E+ KI ++ + K++RWLELA++
Sbjct: 16 RWLFKDLNFGINRGQRVGLVGVNGTGKTTLLRILAGEVQPDSGSVSTRNGILVGYLSQNPVFQDEEASVQDALFSGTNDTLDAIREYEAVME-------NPDVDHDVM---QRAMDRMTDLNAWDYEQKVKQILGKLGIHDLHK-QIKFLSGGQRKRVAMARMLITEPDLLILDEPTNHLDLDTIEWLENLLSTQQQTLLMVTHDRYFLDKVATEIAELDGGQVYSYKGNYAYFLEKKAEREEMAGAEVDKARNLMRKELEWMRRQPKARGTKSKSRIDAFYETKEKAAGKASG--PGLELSVKTTRQGGKIMEVSHISKSFGGKKLIDDFSYVFKKQDRIGIIGPNGMGKSTLLNMLTGKLEPDSGEIDRGQTTVFGYYTQTELT-FKEDQRVIDIVKEVAEVVETAKGET------ISASQFLQHFQFPPAQQYTMVGKLSGGEKRRLQLLRVLIKNPNFLILDEPTNDLDIITLNILEDFLLN-FGGCLLIVSHDRYFMDQLIDHAFVFEGNGKIRNFPGNYTDYREWLKEQDKTV-------------SVSDE-KPKAA---VAAAPKADLPTETKRKASYKEKQEYEQLEKEIDELETKRDQLTGELNSG---GLDHEQLASKAAEIEKISKQIDQKSERWLELADL 626
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Match: A0A7S2ZBK7_9RHOD (Probable ATP-dependent transporter ycf16 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBK7_9RHOD) HSP 1 Score: 476 bits (1224), Expect = 1.960e-155 Identity = 291/659 (44.16%), Postives = 402/659 (61.00%), Query Frame = 1
Query: 13 TGTQQLLVADGLQNTFDGTRFQFEDLQLIVCKGQKLGLVGINGCGKSTLLKVLGKRETCDAGSIESPKATVVTYVEQDPDFGEGATVRDAVFAADNTLMRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAQQVMARLRV--MDLQDIPVANLSGGQRKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERWLTFVCVTHDRYFLENVCQEIIELDSAKLYRYPGNYERFLELKEDRMNAEGAARNAARNKMRGELAWMRKQPKARQAKSKARQERFFELKA---KAAAPAGSNDKGLTLSSTTTRLGKTVVYLKGASLKFSAN-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGKQPLDSGEVATGETVRYGYYEQGGLANMDQDKRVMELVEDTCAASEVLEADTEPVAPQVQARRLLNLFQFPTARWNDRVGRLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGVVRDFQGTFTEYLDYRRDQMKPAAGGGGRANNAGNKSTSDDASPRVSEDEASPFPVEDAGGDRKRKMSNKERYEFASLEEAIDALSERTKELERLLEGAQEAGAGYSEMGEWMEELAKIE 1971
T QL+ +G+ ++ G R Q ED +I+ KG KLG++G+NG GKSTLL +L ++E D+G++ K V V+QDP + T + VFAADN RA+R+Y+ ++ E L+ R + MDS+ WDAE A+Q+++RL + L++ LSGGQ+KRVALAAAL+Q PDVL+LDEPTNHLD+DAIE+LE + LT V VTHDRYFL+ C +I+EL +Y + G Y++FL K R+ E A ++R E WMR+QPKAR KSK+R +RF+ L++ K A PA + L+S +R+G + A L F IL F+YEF + DRIGIVGGNGVGKTTFL VLM Q LD+GEV GETV +GYY Q G+ + RV + V+D A++V D +P+ ++L + F T + + RLSGGEKRRLQLL+V+ PNFLVLDE TNDLD+ +L +LE+FLL DY G LV+VSHDRFFMD++A HLFIFEGDG ++DF G F++YLD RR+++ +++ + S S+ +S + P K+KMSNKER E+ S+ E IDAL+ R +LE L + Y+++ EEL +
Sbjct: 36 TAGSQLIWCEGISKSYCGVRVQVEDADIILTKGSKLGVIGVNGAGKSTLLNILARKEIPDSGAVRYRKGLRVVIVDQDPQMDDDMTPMECVFAADNPTNRAIRDYEDVLARLDKKQCGQEELQ-------RVMNNMDSLHAWDAEANARQILSRLGLDFRSLRNRKFRLLSGGQQKRVALAAALVQNPDVLILDEPTNHLDIDAIEFLENAIRAPELTVVLVTHDRYFLDRSCTDIMELYRGNVYNHSGGYDKFLLNKALRLKEEEHIAEVALGRLRKEAEWMRRQPKARSTKSKSRIDRFYSLQSMAKKRARPAS-----VELASKVSRMGNKTLEFIDADLAFDQRVILKSFSYEFKRNDRIGIVGGNGVGKTTFLRVLMQLQNLDAGEVIIGETVVFGYYNQAGV-DFPPKVRVFDYVKDILYANDV--PDPKPI-------KVLEQYGFETEQMYTEIDRLSGGEKRRLQLLEVMTKDPNFLVLDEVTNDLDLQTLTLLENFLL-DYSGVLVVVSHDRFFMDRIASHLFIFEGDGKIQDFNGNFSDYLDVRREKIPEPD-----SSSMNDTSESNGSSQGHQRSNSKTAP--------KKKMSNKERKEYESILEEIDALAARQADLESSLVSGK---LDYAQLSSRTEELVSFQ 655 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1868.5086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1868.5086.1 >prot_H-elongata_contig1868.5086.1 ID=prot_H-elongata_contig1868.5086.1|Name=mRNA_H-elongata_contig1868.5086.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=573bp MRAVREYQVATEAVEAAGSKPESLEGAMGRFERATSAMDSVGGWDAETFAback to top mRNA from alignment at H-elongata_contig1868:1003..7454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1868.5086.1 ID=mRNA_H-elongata_contig1868.5086.1|Name=mRNA_H-elongata_contig1868.5086.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6452bp|location=Sequence derived from alignment at H-elongata_contig1868:1003..7454- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1868:1003..7454- >mRNA_H-elongata_contig1868.5086.1 ID=mRNA_H-elongata_contig1868.5086.1|Name=mRNA_H-elongata_contig1868.5086.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3438bp|location=Sequence derived from alignment at H-elongata_contig1868:1003..7454- (Himanthalia elongata Himel1 dioecious)back to top |