mRNA_H-elongata_contig186579.5081.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: E1ZHZ8_CHLVA (J domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHZ8_CHLVA) HSP 1 Score: 51.2 bits (121), Expect = 2.110e-7 Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 7 KEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVA 138
+E A ++LGL G TE IKKAYRK+AL HPDKNP PA A
Sbjct: 2 EENAYQLLGLEQGPTATEAEIKKAYRKLALVKHPDKNPDNPAAA 45
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: T0T3G9_9PROT (DnaJ domain protein n=1 Tax=Bacteriovorax sp. DB6_IX TaxID=1353530 RepID=T0T3G9_9PROT) HSP 1 Score: 49.3 bits (116), Expect = 2.090e-6 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 1 MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNP 120
MSK EVLG+G G +K E IKKAYRK+A++ HPD+NP
Sbjct: 1 MSKRDYYEVLGVGKGADKNE--IKKAYRKLAMKYHPDRNP 38
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: UPI001A9153AD (molecular chaperone DnaJ n=1 Tax=Alkalibacter sp. ES005 TaxID=2815577 RepID=UPI001A9153AD) HSP 1 Score: 50.1 bits (118), Expect = 8.540e-6 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 1 MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNP 120
MSK EVLGLG G +EE IKKAYRK+A++ HPD+NP
Sbjct: 1 MSKRDYYEVLGLGKGA--SEEEIKKAYRKLAMKYHPDRNP 38
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A2P6TMJ5_CHLSO (DnaJ-like protein subfamily C member 17 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMJ5_CHLSO) HSP 1 Score: 48.9 bits (115), Expect = 2.180e-5 Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 10 EQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVA 138
E A ++LGL G TE IKKAYRK+AL HPDKNP P A
Sbjct: 2 ENAYQLLGLEQGPAATEAEIKKAYRKLALVKHPDKNPDNPRAA 44
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A7S4DE88_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE88_HETAK) HSP 1 Score: 47.4 bits (111), Expect = 2.240e-5 Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 1 MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRP 129
M E+A E+LG+ DG +EE IKKAYRK+AL+ HPDKN P
Sbjct: 40 MKLEEAQEILGVEDGV--SEEDIKKAYRKLALQYHPDKNKDNP 80
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A2P6VE42_9CHLO (Putative boron transporter 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE42_9CHLO) HSP 1 Score: 48.5 bits (114), Expect = 3.010e-5 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 7 KEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVA 138
+E A E+LGL G TE IKKAYR++AL HPDKNP P A
Sbjct: 2 EENAYELLGLEQGPAATEADIKKAYRRLALIKHPDKNPDNPKAA 45
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A257VC09_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Acidobacteriia bacterium 12-62-4 TaxID=1970571 RepID=A0A257VC09_9BACT) HSP 1 Score: 45.8 bits (107), Expect = 3.260e-5 Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 1 MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNP 120
MSK EVLGL G + E A+K AYRK+AL+ HPD+NP
Sbjct: 1 MSKRDYYEVLGLSKGAD--EAALKSAYRKLALQYHPDRNP 38
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A087SJ56_AUXPR (DnaJ-like protein subfamily C member 17 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJ56_AUXPR) HSP 1 Score: 48.1 bits (113), Expect = 4.000e-5 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 16 ACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVA 138
A ++LGL +G E T+ IKKAYR++AL+ HPDKNP P A
Sbjct: 5 AYKLLGLENGPEATDVEIKKAYRRLALQKHPDKNPDNPNAA 45
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A1D2A8M4_AUXPR (J domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A8M4_AUXPR) HSP 1 Score: 48.1 bits (113), Expect = 4.100e-5 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 16 ACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVA 138
A ++LGL +G E T+ IKKAYR++AL+ HPDKNP P A
Sbjct: 5 AYKLLGLENGPEATDVEIKKAYRRLALQKHPDKNPDNPNAA 45
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Match: A0A349DMY4_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Microscillaceae bacterium TaxID=2053581 RepID=A0A349DMY4_9BACT) HSP 1 Score: 44.7 bits (104), Expect = 6.130e-5 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 1 MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNP 120
M+K EVLG+G K E +KKAYRK+A++ HPDKNP
Sbjct: 1 MAKRDYYEVLGVGRSASKDE--LKKAYRKLAIKHHPDKNP 38 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186579.5081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig186579.5081.1 >prot_H-elongata_contig186579.5081.1 ID=prot_H-elongata_contig186579.5081.1|Name=mRNA_H-elongata_contig186579.5081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp MSKEQACEVLGLGDGGEKTEEAIKKAYRKIALETHPDKNPVRPAVAback to top mRNA from alignment at H-elongata_contig186579:545..682- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig186579.5081.1 ID=mRNA_H-elongata_contig186579.5081.1|Name=mRNA_H-elongata_contig186579.5081.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=138bp|location=Sequence derived from alignment at H-elongata_contig186579:545..682- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig186579:545..682- >mRNA_H-elongata_contig186579.5081.1 ID=mRNA_H-elongata_contig186579.5081.1|Name=mRNA_H-elongata_contig186579.5081.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=276bp|location=Sequence derived from alignment at H-elongata_contig186579:545..682- (Himanthalia elongata Himel1 dioecious)back to top |