mRNA_H-elongata_contig18640.5070.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: D7FVE7_ECTSI (Glutamate synthase (NADH/NADPH-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE7_ECTSI) HSP 1 Score: 629 bits (1621), Expect = 1.590e-223 Identity = 303/329 (92.10%), Postives = 318/329 (96.66%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEETFIGAM 987
+VTVYEREDRVGGLLMYGIPNMKLDKDTVKRR+DLLA+EGIEFVT ANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGR+LKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGF+SAEGKDVIVIGGGDTGTDCIGTSMRHRCRSM NFELLPQPPDSRA NPWPQWPKIFG+DYGHGEVRAVFG+DPRQYSVMT +FL DDDGNVRGL+TVEVEVTK+GIKQI GTEKEWPAQLVVLAMGFVSPE+ ISKPLKL+LDQR+NIHA YGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAA AV+SYLA KAEQQM+EETFIGAM
Sbjct: 231 KVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRIDLLAEEGIEFVTGANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRELKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFISAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPQPPDSRAPGNPWPQWPKIFGIDYGHGEVRAVFGEDPRQYSVMTKEFLSDDDGNVRGLITVEVEVTKDGIKQIEGTEKEWPAQLVVLAMGFVSPESAISKPLKLELDQRENIHAPYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAADAVNSYLAAKAEQQMEEETFIGAM 559
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A836CI68_9STRA (Glutamate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI68_9STRA) HSP 1 Score: 556 bits (1433), Expect = 5.690e-195 Identity = 263/330 (79.70%), Postives = 294/330 (89.09%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQ-QMDEETFIGAM 987
+VTVYEREDR+GGLLMYGIPNMKLDKDTV+RRVDLLA+EGIEFVT ANIG D+DVND+RA+ DALVLTVGSTKPRDLPVPGR+LKG+HFAMEFLTKNQKRLLMT DG L+SNWD GFV+AEGKDVIVIGGGDTGTDCIGTSMRHRCRS+ NFELLP+PP++RA NPWPQWPK+FGVDYGHGEVRAVFG DPRQYS+MT+KF+GD+DGN++ L TV VEVT +GIK +PG+E+EWP QLVVLAMGFVSPE IS L L LDQRDN+HA YGD+RT+ EGVF+AGDCRRGQSLVVWAINEGRG A VD YLA KAE DE F+ AM
Sbjct: 229 KVTVYEREDRIGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTNANIGPDIDVNDLRAANDALVLTVGSTKPRDLPVPGRELKGIHFAMEFLTKNQKRLLMTRDGNLQSNWDAGFVTAEGKDVIVIGGGDTGTDCIGTSMRHRCRSLVNFELLPRPPNARAPTNPWPQWPKVFGVDYGHGEVRAVFGVDPRQYSIMTSKFIGDEDGNLKALQTVNVEVTADGIKHVPGSEREWPCQLVVLAMGFVSPEHHISSALNLTLDQRDNLHAPYGDFRTSVEGVFAAGDCRRGQSLVVWAINEGRGVADTVDRYLAQKAEDAHQDESVFVSAM 558
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A7S3Y096_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y096_HETAK) HSP 1 Score: 505 bits (1301), Expect = 3.300e-174 Identity = 242/330 (73.33%), Postives = 281/330 (85.15%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEE-TFIGAM 987
+VTVYER DRVGGLLMYGIPNMKL+K+TV+RRV LL +EGIEFVT AN+GVDVDVND+R++ DALVLT+GST+PRDLP+PGR+L+GVHFAMEFLTKNQKRLL+T +G L+S WD FVSAEGKDV+VIGGGDTGTDCIGTSMRHRC+S+ N ELLP+PPD RA NPWPQWPK+FGVDYGHGEVRAVFGKDPR YSVMT +FLGD +GN+R LVTVEV++T +GI+ + G+E E P QL VLAMGFV PE + LKLD DQR NI A YGD+RT+ EGVF+AGDCRRGQSLVVWAINEGRG A + YL +AE DEE +IG+M
Sbjct: 280 KVTVYERADRVGGLLMYGIPNMKLEKETVERRVQLLREEGIEFVTGANVGVDVDVNDLRSANDALVLTIGSTQPRDLPIPGRELQGVHFAMEFLTKNQKRLLLTKEGNLQSGWDESFVSAEGKDVVVIGGGDTGTDCIGTSMRHRCKSILNLELLPRPPDQRAPGNPWPQWPKVFGVDYGHGEVRAVFGKDPRTYSVMTKEFLGDGEGNLRALVTVEVKLTDKGIEVVEGSEVEHPCQLAVLAMGFVHPEQLLPGELKLDTDQRQNILAEYGDFRTSREGVFAAGDCRRGQSLVVWAINEGRGVADQCNRYLMKRAEDSSDEEGAYIGSM 609
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: I2CNZ7_NANGC (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNZ7_NANGC) HSP 1 Score: 497 bits (1280), Expect = 1.150e-171 Identity = 232/329 (70.52%), Postives = 280/329 (85.11%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEETFIGAM 987
+VTVYEREDR+GGLLMYGIPNMKLDK+ V RRVD+L +EGIEFVT ++G D+ + D+RA+ DALVLT+GST PRDL VP R+ G+HFAMEFLTKNQKRL+MT +G+LES WD F++AEGKDVIV+GGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP+ RA +NPWPQWPKI+G+DYGH EV+AVFG+DPR+YSVMT +F+ D GNV+GLVTV VEV+ +GI IPGTEKEWPA LV+LAMGF++PE+TI L LD+DQR NI A YGDYRTN +GVF+AGDCRRGQSLVVWAINEGRG A +V+ +L K+E DE +IGAM
Sbjct: 237 KVTVYEREDRIGGLLMYGIPNMKLDKEKVLRRVDMLREEGIEFVTGTHVGKDLAIEDLRANVDALVLTLGSTVPRDLRVPNREANGIHFAMEFLTKNQKRLMMTREGRLESGWDKSFITAEGKDVIVVGGGDTGTDCIGTSMRHRCKSIVNFELMPRPPNERAPHNPWPQWPKIYGMDYGHAEVQAVFGRDPREYSVMTKEFVKDQQGNVKGLVTVNVEVSAKGITPIPGTEKEWPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDE-AYIGAM 564
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A7S2WE59_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WE59_9STRA) HSP 1 Score: 491 bits (1263), Expect = 7.570e-169 Identity = 230/318 (72.33%), Postives = 273/318 (85.85%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDG-GFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAE 951
+VTVYER+DR+GGLLMYGIPNMKL+K+TV RRV+LL +EGIEFVT ANIG +DV+++R++ DAL L VG+TKPRDLPVPGR+LKGVHFAMEFLTKNQKRLLMT +G LES+W+ F++A GK VIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+PQPP R NNPWPQWP++FGVDYGH EV AVFGKDPR YSVMT +F+GDDDGNV+ L+T +VE+T++G K I G+E+EWP L VL+MGFVSPE I+K + LDLDQRDNIHA YGD+RT+ EG+F+AGDCRRGQSLVVWAINEGRG A + SYL K E
Sbjct: 243 KVTVYERDDRIGGLLMYGIPNMKLEKETVDRRVNLLREEGIEFVTNANIGETIDVDELRSNYDALTLCVGATKPRDLPVPGRNLKGVHFAMEFLTKNQKRLLMTKEGTLESHWEKENFITAAGKSVIVIGGGDTGTDCIGTSMRHRCKSVVNFELMPQPPMEREPNNPWPQWPRVFGVDYGHAEVTAVFGKDPRVYSVMTKEFIGDDDGNVKALITQDVEITEQGPKTIEGSEREWPCDLCVLSMGFVSPEDYIAKEIGLDLDQRDNIHAVYGDFRTSVEGIFAAGDCRRGQSLVVWAINEGRGVADSCHSYLLQKKE 560
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A1Z5JPW8_FISSO (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPW8_FISSO) HSP 1 Score: 489 bits (1259), Expect = 2.590e-168 Identity = 232/329 (70.52%), Postives = 274/329 (83.28%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDG-GFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEETFIGA 984
+VTVYER DR+GGLLMYGIPNMKL+KDTV RRV+LL +EGIEFVT ANIG +VD+N++RA+ DAL+L VGSTKPRDLPVPGR+LKG+HFAMEFLT NQK+LLMT +G LES W+ +++A GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+PQPP SRA +NPWPQWP++FGVDYGH E +AVFGKDPR YSVMT +F+GD++G+V+ LVT +VE++KEG K I G+E+EWPA LVVL+MGFV+PE I + L LD DQR NIHA YGDYRTN EGVF+ GDCRRGQSLVVWAINEGRG A A YL K + GA
Sbjct: 237 KVTVYERADRIGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFVTNANIGQNVDINELRANVDALILCVGSTKPRDLPVPGRELKGIHFAMEFLTANQKKLLMTKEGTLESQWEKENWITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEAKAVFGKDPRVYSVMTKEFIGDENGHVKALVTQDVEISKEGPKAIEGSEREWPADLVVLSMGFVAPEQYIVEELGLDTDQRKNIHAVYGDYRTNVEGVFAGGDCRRGQSLVVWAINEGRGVADACHQYLQQKRDSVPSSAQVSGA 565
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: B8C4A8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4A8_THAPS) HSP 1 Score: 481 bits (1238), Expect = 9.000e-167 Identity = 225/322 (69.88%), Postives = 274/322 (85.09%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGG-FVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMD 963
+VTV+ER DRVGGLLMYGIPNMKL+KDTV RRV+LL +EGIEF+T A+IG +VDVN++R + DAL L +G+TKPRDLPVPGR+LKGVH+AMEFLT+NQKRLL+T +G LESNWD F++A GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+PQPP RA NNPWPQWP++FG+DYGH EVRAVFGKDPR Y+VMT +F+GD+DGNV+ LVT +V+++ + G+E+EWP L VL+MGFVSPE I+K L LDLDQR+NIHA +GDYRT+ EGVF+ GDCRRGQSLVVWAI+EGRG A AVD+YL K +++
Sbjct: 124 KVTVFERADRVGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFITNADIGKNVDVNELRTNFDALSLCLGATKPRDLPVPGRELKGVHYAMEFLTENQKRLLVTKEGHLESNWDKSKFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPPERATNNPWPQWPRVFGIDYGHAEVRAVFGKDPRVYAVMTKEFIGDEDGNVKALVTQDVDMSSGRPVAVEGSEREWPCDLAVLSMGFVSPEDYIAKELDLDLDQRNNIHALHGDYRTSIEGVFAGGDCRRGQSLVVWAIHEGRGVADAVDAYLKEKRRDEIE 445
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A1E7FG38_9STRA (NADH-glutamate synthase small subunit n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FG38_9STRA) HSP 1 Score: 481 bits (1238), Expect = 6.210e-166 Identity = 229/329 (69.60%), Postives = 272/329 (82.67%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWD-GGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEETFIGA 984
+VTV+ER DRVGGLLMYGIPNMKL+K+TV RRV+LL +EGIEFVT A+IG +VDVN+++A DAL LT+GSTKPRDLPVPGRDLKGVHFAMEFLT NQK+LLMT +GKLES W+ +++AEGKDVIVIGGGDTGTDCIGTSMRHRC S+ NFEL+PQPP RA +NPWP+WP++FG+DYGH EVRA GKDPR YSVMT + GD DGNV L+T +VE+T G K I G+E+EWPA LVVL+MGF+SPEA +++ L LD+DQR+NI A YGD+RT+ EGVF+ GDCRRGQSLVVWAINEGRG A A D YL K ++D GA
Sbjct: 181 KVTVFERADRVGGLLMYGIPNMKLEKETVDRRVNLLREEGIEFVTNADIGKNVDVNELKADFDALCLTLGSTKPRDLPVPGRDLKGVHFAMEFLTANQKKLLMTKEGKLESQWEEDNWITAEGKDVIVIGGGDTGTDCIGTSMRHRCNSVTNFELMPQPPMERASDNPWPEWPRVFGIDYGHAEVRAATGKDPRVYSVMTKELTGDADGNVIALITQDVEMTSTGPKVIEGSEREWPADLVVLSMGFLSPEAYVTEELGLDVDQRNNIQAVYGDFRTSVEGVFAGGDCRRGQSLVVWAINEGRGTADACDQYLQQKRFDEVDSTQITGA 509
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A7S3LHR0_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LHR0_9STRA) HSP 1 Score: 483 bits (1242), Expect = 1.930e-165 Identity = 229/313 (73.16%), Postives = 271/313 (86.58%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWDG-GFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYL 936
+VTVYER DR+GGLLMYGIPNMKL+K+TV+RRV+LL +EGIEFVT A+IG +VDVN++RA+ DA+ L +G+TKPRDLPVPGRDLKGVHFAMEFLT NQKRLLMT +G LES W+ F++A GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+PQPP SRA +NPWPQWP++FGVDYGH EV+AVFG+DPR YSV+T +F+GD +GNV+GLVT +VE+T +G K I GTE+EWPA LVVL+MGFVSPE+ I + L LD DQR NI A YGD+RTN EGVF+ GDCRRGQSLVVWAINEGRG A A + YL
Sbjct: 260 KVTVYERADRIGGLLMYGIPNMKLEKETVERRVNLLREEGIEFVTNADIGRNVDVNELRANNDAVALCMGATKPRDLPVPGRDLKGVHFAMEFLTANQKRLLMTKEGTLESKWEKENFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEVQAVFGEDPRVYSVLTKEFIGDGNGNVKGLVTQDVEITDKGPKAIEGTEREWPADLVVLSMGFVSPESYIVEELGLDTDQRSNIQAVYGDFRTNVEGVFAGGDCRRGQSLVVWAINEGRGVADACNEYL 572
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Match: A0A6U3PC01_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PC01_9STRA) HSP 1 Score: 481 bits (1239), Expect = 3.980e-165 Identity = 227/329 (69.00%), Postives = 275/329 (83.59%), Query Frame = 1
Query: 1 QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLLMTGDGKLESNWD-GGFVSAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPQPPDSRAENNPWPQWPKIFGVDYGHGEVRAVFGKDPRQYSVMTTKFLGDDDGNVRGLVTVEVEVTKEGIKQIPGTEKEWPAQLVVLAMGFVSPEATISKPLKLDLDQRDNIHATYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAATAVDSYLAHKAEQQMDEETFIGA 984
+VTV+ER DRVGGLLMYGIPNMKL+K+TV+RRVDLL +EGIEFVT ANIG +VD N++RA+ D++ L +GSTKPRDLPVPGR+LKGVHFAMEFLT NQKRLLMT +G LES W+ F++A GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+PQPP RA +NPWPQWP++FGVDYGH EV+AVFGKDPR YSVMT +F+GD +GNV+ LVT +VE+T +G + I G+E+EWP L VL+MGF+SPEA I + L LD+DQR+NIHA YGD+RT+ EGVF+ GDCRRGQSLVVWAINEGRG A + + YL K +++ GA
Sbjct: 248 KVTVFERADRVGGLLMYGIPNMKLEKETVERRVDLLREEGIEFVTNANIGYNVDANELRANFDSVCLCLGSTKPRDLPVPGRELKGVHFAMEFLTANQKRLLMTKEGTLESKWEKDNFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMERAPDNPWPQWPRVFGVDYGHAEVQAVFGKDPRVYSVMTKEFIGDGEGNVKALVTQDVEITPQGPRAIEGSEREWPCDLCVLSMGFLSPEAYIVEELGLDVDQRNNIHAVYGDFRTSLEGVFAGGDCRRGQSLVVWAINEGRGVAESCNEYLVKKKQEETLSAQSTGA 576 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18640.5070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18640.5070.1 >prot_H-elongata_contig18640.5070.1 ID=prot_H-elongata_contig18640.5070.1|Name=mRNA_H-elongata_contig18640.5070.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=330bp QVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRVDLLAQEGIEFVTRANIGback to top mRNA from alignment at H-elongata_contig18640:1473..6890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18640.5070.1 ID=mRNA_H-elongata_contig18640.5070.1|Name=mRNA_H-elongata_contig18640.5070.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5418bp|location=Sequence derived from alignment at H-elongata_contig18640:1473..6890- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18640:1473..6890- >mRNA_H-elongata_contig18640.5070.1 ID=mRNA_H-elongata_contig18640.5070.1|Name=mRNA_H-elongata_contig18640.5070.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1980bp|location=Sequence derived from alignment at H-elongata_contig18640:1473..6890- (Himanthalia elongata Himel1 dioecious)back to top |