mRNA_H-elongata_contig18594.5046.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: D7FKJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ6_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.540e-78 Identity = 109/136 (80.15%), Postives = 125/136 (91.91%), Query Frame = 1
Query: 1 MYLLLLAISWGVMQMTQLFTIAKSTTLINVLHGVITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
MY+L +A WGV+ MTQ+F++AKSTT++NV+HG+ITFYFFHWTKGSPD+ TQGEWNGLTFWEQ++AGVPWTKTKKF+M+VPTVLCLIP V SDY PRYLA+NLPVC ILLLAKSPLMHRVRIL INAT GIDDRVK
Sbjct: 48 MYVLFIATIWGVVHMTQIFSVAKSTTMVNVVHGLITFYFFHWTKGSPDEFTQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYQPRYLAVNLPVCCILLLAKSPLMHRVRILDINATTGIDDRVK 183
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A835ZKI1_9STRA (ORMDL family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI1_9STRA) HSP 1 Score: 192 bits (487), Expect = 5.850e-60 Identity = 86/137 (62.77%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 4 YLLLLAISWGVMQMTQLFTIAKSTTLINVLHGVITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVKAH 414
Y+ + + W ++ MTQLF+ A+STT++NV+HG++TF FFHW KGSPD+ TQGEWNGLTFWEQ++AG+PWT TKKFLM+VP +LCL P +ASDY+ Y+A+NLP+ IL AK P MHRVRI+ INAT GIDD K H
Sbjct: 50 YVCFVTVIWAILHMTQLFSFAESTTVLNVVHGLVTFLFFHWIKGSPDEFTQGEWNGLTFWEQLDAGLPWTPTKKFLMLVPALLCLPPLLASDYDSFYVAVNLPIFLILETAKLPSMHRVRIMSINATAGIDDLKKYH 186
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A7S3MHK4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHK4_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.750e-43 Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 4 YLLLLAISWGVMQMTQLFTIAKSTTLINVLHGVITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
Y+ ++ WG++ ++ F+ T+ N+ HGV TF HW KG PDD TQGE+NGLT +EQ++AGVPWT TKKFL++VPT+LCLI + Y P Y+ +N + I ++ K P MHRVRI IN+TPGID+ V+
Sbjct: 34 YIAVILFVWGLIHISTFFSAEDCWTVTNMAHGVTTFVMLHWIKGCPDDSTQGEYNGLTLFEQIDAGVPWTATKKFLILVPTLLCLIACFTASYKPFYIVVNCGIMLICVIGKFPQMHRVRIFGINSTPGIDNAVE 168
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A482T393_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T393_9ARCH) HSP 1 Score: 131 bits (329), Expect = 6.050e-37 Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 103 ITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVKA 411
+TF FHW KG PDD TQGE+N TF+EQ++AGVPWT KKFLM+VPTV+ I A+DY P Y+ +N + FI ++AK P MH VRIL IN+TPGID+ V A
Sbjct: 1 MTFVVFHWIKGCPDDSTQGEYNAFTFYEQLDAGVPWTSQKKFLMLVPTVITWIACYAADYKPFYVIVNCVIFFICIIAKMPQMHGVRILGINSTPGIDNPVLA 103
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A024GT30_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GT30_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.040e-36 Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 76 TLINVLHGVITFYFFHWTKGSPDDM-TQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
T +NV+HG+I+F HW KGSPDD + G++ LTF+EQ++ PW+ TKKFLMVVPT++ ++ SV +DY+ ++L IN P+ F+L+LAK P HRVRI IN+T GIDD V+
Sbjct: 62 TAVNVIHGLISFGIMHWIKGSPDDSNSMGDYRELTFYEQIDENHPWSGTKKFLMVVPTMIFMLASVTTDYDTQHLMINFPIWFVLILAKLPEFHRVRIFGINSTVGIDDEVR 173
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: F0W2T9_9STRA (ORM1like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2T9_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.040e-35 Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 76 TLINVLHGVITFYFFHWTKGSPDD-MTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRV 405
T +NV+HG+++F HW KGSPDD M+ G++ LTF+EQ++ PW+ TKKFL+VVPTV+ ++ SV +DY+ +L IN P+ F+L+LAK P HRVRI IN+T GIDD V
Sbjct: 83 TAVNVVHGLVSFGIMHWIKGSPDDSMSMGDYRELTFYEQIDEDHPWSGTKKFLIVVPTVIFMLASVTTDYDTHHLMINFPIWFVLILAKLPEFHRVRIFGINSTVGIDDEV 193
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A5D6XMZ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMZ5_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.090e-35 Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 76 TLINVLHGVITFYFFHWTKGSPDDMTQ-GEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
T++NV+HG++TF HW KGSPDD G++ LTF+EQ++ G PWT TK+FLM+VPTVL ++ SV++DY+ +L INLP+ L+LAK P + RVRI IN+T GIDD K
Sbjct: 46 TVVNVVHGIVTFGIMHWIKGSPDDSNMMGDYRELTFYEQIDQGHPWTGTKRFLMIVPTVLFMLASVSTDYDTLHLCINLPIWATLILAKLPELDRVRIFGINSTVGIDDVAK 157
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: K3WUL0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL0_GLOUD) HSP 1 Score: 129 bits (325), Expect = 5.780e-35 Identity = 60/112 (53.57%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 76 TLINVLHGVITFYFFHWTKGSPDDM-TQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
T++NV+HG++TF HW KGSPDD + G++ LTF+EQ++ G PWT TKKFLM+VPT L ++ +A+DY+ +L INLP+ +L+LAK P + RVRI IN+T GIDD K
Sbjct: 106 TVVNVVHGIVTFGIMHWIKGSPDDSNSMGDYRELTFYEQIDQGHPWTGTKKFLMIVPTALFMLACIATDYDTVHLCINLPIWAVLILAKLPELDRVRIFGINSTVGIDDVAK 217
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: W7TSM3_9STRA (Ormdl family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM3_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.050e-34 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 61 IAKSTTLINVLHGVITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPV-CFILLLAKSPLMHRVRILHINATPGIDD 399
+ + T+ +V+H ++ FY FHW KGSPD+ +QGE+NGLT WEQ+E G+PWTKTKK +V T L S +DY+ YLAIN PV F+ ++ K P MHRVR+ N T GIDD
Sbjct: 63 LGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Match: A0A662WYE6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYE6_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.940e-32 Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 103 ITFYFFHWTKGSPDDMTQGEWNGLTFWEQVEAGVPWTKTKKFLMVVPTVLCLIPSVASDYNPRYLAINLPVCFILLLAKSPLMHRVRILHINATPGIDDRVK 408
++F HW KGSPDD + G++ LTF+EQ++ G PWT TKKFLM++PT+L L SVA+DY+ R+L IN P+ L+LAK P + RVRI IN+T GIDD+ K
Sbjct: 22 VSFGIMHWIKGSPDDNSMGDYRELTFYEQIDQGHPWTGTKKFLMMIPTLLFLAASVATDYDTRHLLINFPIWATLILAKLPELDRVRIFGINSTVGIDDQGK 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18594.5046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18594.5046.1 >prot_H-elongata_contig18594.5046.1 ID=prot_H-elongata_contig18594.5046.1|Name=mRNA_H-elongata_contig18594.5046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MYLLLLAISWGVMQMTQLFTIAKSTTLINVLHGVITFYFFHWTKGSPDDMback to top mRNA from alignment at H-elongata_contig18594:3413..4683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18594.5046.1 ID=mRNA_H-elongata_contig18594.5046.1|Name=mRNA_H-elongata_contig18594.5046.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1271bp|location=Sequence derived from alignment at H-elongata_contig18594:3413..4683- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18594:3413..4683- >mRNA_H-elongata_contig18594.5046.1 ID=mRNA_H-elongata_contig18594.5046.1|Name=mRNA_H-elongata_contig18594.5046.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig18594:3413..4683- (Himanthalia elongata Himel1 dioecious)back to top |