mRNA_H-elongata_contig18570.5030.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: D7FT75_ECTSI (Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT75_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.070e-59 Identity = 111/140 (79.29%), Postives = 119/140 (85.00%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDM 420
EVAACLCNLSLSE+DRV +A RCVP LV +SQGGD E RQAIG LANLAE+IDTHELIAK GGGR M LMKHD+LD+FREASR I NLLTSFEHQA+IIE GL G+ LA STD ECQYHAALSFRKLSPNLASHR M
Sbjct: 2940 EVAACLCNLSLSEQDRVAVAARCVPALVALSQGGDLEAARQAIGTLANLAEEIDTHELIAKSGGGRVMTGLMKHDALDVFREASRAISNLLTSFEHQAVIIEQGLAGLNALAESTDPECQYHAALSFRKLSPNLASHRGM 3079
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A7S1TZK5_9STRA (Vacuolar protein 8 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZK5_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.200e-52 Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDMCYGGG 435
EVAACLCNLSLSE DRV IA CV LV +SQGGD ET RQ++G LAN+AED +TH I K GGGR MI LM HDS+DI REASR I NLL+SF HQA IIEDG+PG+ LA S D+ECQY+AALSFRKLSPN+ASH+ + GG
Sbjct: 25 EVAACLCNLSLSEPDRVAIAAECVEPLVFLSQGGDLETARQSVGTLANIAEDTETHGYIGKAGGGRVMIMLMDHDSIDIHREASRAISNLLSSFHHQAEIIEDGVPGLVALATSPDAECQYNAALSFRKLSPNIASHKVIIENGG 169
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A8J2SEI2_9STRA (Vacuolar protein 8 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEI2_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.190e-38 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 46 RVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDMCYGGG 435
R+ +A+ C+P +V ++Q GDRE RQA+G+LANLAED+ TH +A +GG R M+ L+ HD++DI REASR I NLLTSF HQA II DGLPG+ LAL D+ECQY+AALSFRKL+PN +H + GG
Sbjct: 2979 RMDVAKVCLPAMVHLAQCGDREAARQAMGSLANLAEDMHTHTHVAAYGGARCMVALVDHDAVDIHREASRAIANLLTSFHHQATIISDGLPGLVHLALGPDAECQYNAALSFRKLTPNRDAHEGIMEHGG 3108
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A835Z6R1_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R1_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.850e-35 Identity = 83/160 (51.88%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 1 EVAACLCNLSL---SEEDRVTIAERCVPTLVRVSQGG-------------DRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDMCYGG 432
E AACLCNL+L + R +A+ CVP LV +++G D ET RQAIGALANLAED TH IA GG A+ + +LD++REASR + NLLTS E QA ++E GLPGI TLA + D+ECQYHAALS RKL+PN A+H +C G
Sbjct: 3149 EAAACLCNLTLGAAAPAQRAALADACVPALVALARGXXXXXXXXXXXXXXDVETARQAIGALANLAEDPATHARIAAEGGTEALAAVAAAAALDMYREASRAVCNLLTSAELQAAVVERGLPGIVTLASAPDAECQYHAALSLRKLTPNTAAHARLCAAG 3308
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A482RX95_9ARCH (Vacuolar protein 8 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX95_9ARCH) HSP 1 Score: 135 bits (341), Expect = 1.370e-30 Identity = 83/188 (44.15%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 1 EVAACLCNLSLSE--EDRVTIAERCVPTLVRVSQ--------------------------GGDR---------------ETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDMCYGGG 435
EVAA LC+LSLS+ + R+ IA +C+ LVR++ GG+ + RQAIGA+ANLAE++DTHE IAK RA I L S+DI REA+R I NLL+SF HQA IIE+G+PG+ L+ S D E YH+ALSFRKL PN+ SH + Y GG
Sbjct: 987 EVAATLCSLSLSKNTQHRMEIAYKCLQALVRLASVAGSEHAAISASIEKKKKEAGVEDDLGGNSGNFVPELSAHQKSLIDIARQAIGAMANLAEEVDTHEFIAKAQASRAFIALESFHSIDIQREATRAIANLLSSFRHQATIIEEGIPGLVALSYSEDLEACYHSALSFRKLGPNMKSHSIIVYAGG 1174
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A7S4T4K8_9STRA (Vacuolar protein 8 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T4K8_9STRA) HSP 1 Score: 130 bits (327), Expect = 7.060e-29 Identity = 67/140 (47.86%), Postives = 91/140 (65.00%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDM 420
E +ACLCNLSL+ R I + C+ L R+ D +T RQA+GALAN+ E+ +TH+ + K G + I L++H S+DI REASR I NLL S +I GL + +L +++D ECQY+A+LSFRKLSPN SH M
Sbjct: 157 EFSACLCNLSLNVRCRADIVKTCIKELNRLLSSNDTDTVRQAMGALANITENQETHDTMQKSGTSNSTIALLQHSSMDIKREASRAIANLLGSKNQHCEVIRGGLVHLISLGVTSDPECQYNASLSFRKLSPNKDSHFTM 296
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A812KVL6_9DINO (Vacuolar protein 8 (Fragment) n=5 Tax=Sar TaxID=2698737 RepID=A0A812KVL6_9DINO) HSP 1 Score: 120 bits (300), Expect = 2.890e-25 Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAE--RCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASH 411
E A + N++L + + A + LV + Q D E R A GALAN+AED+ TH I+ GGGR M+ L+ H S+++ REASR + NLL SF+ +I LPGI LA ++D EC+YHA+L++RKL+PNLA+H
Sbjct: 3133 ETAVAIFNVTLDDVAKPAAAADPALMGGLVVLCQSPDEEVARFACGALANIAEDLATHPSISAVGGGRFMVGLIHHGSIEVHREASRALANLLASFDVHGDVIAAALPGIARLAFTSDEECRYHASLAYRKLAPNLAAH 3271
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A7S2P367_9STRA (Vacuolar protein 8 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P367_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.250e-24 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFEHQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSP 396
E+AACLCNLS S ++ I +RC+ TL+ +++ D E RQ++GALANL ED+ TH + A R++I+ + H+ +D+ REASR + NL+TS I+E G+ + L S D EC YH ALS RKL+P
Sbjct: 2891 ELAACLCNLSASSH-KLIITDRCIRTLLSLAKTADEEALRQSMGALANLCEDVTTHSIFAASHALRSVIDCLCHEKIDVHREASRAVSNLVTSCCFHGAILEFGMIQLLHLCSSEDKECLYHVALSLRKLAP 3021
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A7S3JQA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQA6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.190e-20 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLL 273
EVAA LCNL+L R+ A C+P +V ++Q GDRE RQA+GALANLAE +TH +A GG R ++ L++H +D+ REASR I NLL
Sbjct: 32 EVAAGLCNLTLEASARMEAARCCLPAIVNLAQCGDREVARQALGALANLAESPETHAHVAACGGSRCVVALVEHTDVDVHREASRAIANLL 122
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Match: A0A2R5GK93_9STRA (Vacuolar protein 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK93_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.660e-19 Identity = 56/155 (36.13%), Postives = 88/155 (56.77%), Query Frame = 1
Query: 1 EVAACLCNLSLSEEDRVTIAE--------RCVPTLVRVSQGGDRETTRQAIGALANLAEDIDTHELIAKFGGGRAMIELMKHDSLDIFREASRVIVNLLTSFE--HQAIIIEDGLPGIYTLALSTDSECQYHAALSFRKLSPNLASHRDMCYGGG 435
EVAA LCNLS+S+E ++ ++ C+ L+ ++Q +AED +TH ++ + G + LM+ ++++REASR I NLL S H+ + EDGLP ++ +A S D +CQ HAAL +RKLSPN+ +H ++C G
Sbjct: 2046 EVAAALCNLSVSDEAKLALSGCGSRRPNLECLRVLITLAQSTXXXXXXXXXXXXXXIAEDPETHPVLTEEQGIHFLSVLMRSRKVEVYREASRAISNLLGSMHVTHKTFLDEDGLPSVFRVAKSEDLQCQLHAALCYRKLSPNVRTHIEICASPG 2200 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18570.5030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18570.5030.1 >prot_H-elongata_contig18570.5030.1 ID=prot_H-elongata_contig18570.5030.1|Name=mRNA_H-elongata_contig18570.5030.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=435bp EVAACLCNLSLSEEDRVTIAERCVPTLVRVSQGGDRETTRQAIGALANLAback to top mRNA from alignment at H-elongata_contig18570:3085..4618- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18570.5030.1 ID=mRNA_H-elongata_contig18570.5030.1|Name=mRNA_H-elongata_contig18570.5030.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1534bp|location=Sequence derived from alignment at H-elongata_contig18570:3085..4618- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18570:3085..4618- >mRNA_H-elongata_contig18570.5030.1 ID=mRNA_H-elongata_contig18570.5030.1|Name=mRNA_H-elongata_contig18570.5030.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2610bp|location=Sequence derived from alignment at H-elongata_contig18570:3085..4618- (Himanthalia elongata Himel1 dioecious)back to top |