mRNA_H-elongata_contig18547.5016.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A6H5KTT2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTT2_9PHAE) HSP 1 Score: 426 bits (1095), Expect = 1.160e-142 Identity = 270/490 (55.10%), Postives = 333/490 (67.96%), Query Frame = 1
Query: 1 MVLPTQGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKGGAVV--AAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIP-RLRSNEGRNCHNEKGEKVHSEL-----FTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNAS----AIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSI---SAARAEGVREAPSRLEEG--PNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
M +P+QG M SERPS ALA GSIGNYKGVMLCNRPF GTA AAKGG AAA K+ F+TG VKSE+G++ ++LQT+ RKRVK+ETALTRH++WLADLQLTK LEEQYM D +KKEE K+RFA+REAR+R+ RE D ++ NEE G +AW IGLDDDV+ K + P + + + R E+G EL +R D +EL+A EKRRKRDG PCRPKWAMTE A EDEL HE+EL++LL FT+GLDF +YI+DAE+QSMI+Q+K+RI+E+E QP+VDE +D +D + D D LDE E+R AK+MKLT KNL +E +AS TG +++ DDN+S+ARTALSEGG S+RSIHSTRSLAAVAEKAR SI AP+RLE+G +G D+ VNDIVVVTH+DDGGLR GGKN +SNLPYIRRNPA+
Sbjct: 1 MSVPSQGTMFSERPSGA-----------TALAGAGSIGNYKGVMLCNRPFAGTAAAAKGGGDNGGAAAGKHAFVTGKVKSEVGFADKSLQTEKLLRKRVKRETALTRHRKWLADLQLTKQALEEQYMEDLQKKEENKRRFAQREARMRQMTRELGAA---ASDRKIGQGYGNEEQGSKAWAIGLDDDVEPETTTKNHNRPCSVLNADDRLDGKEEGGSSRPELEEEEGVGNRIDPSELKAVEKRRKRDGKPCRPKWAMTEAEAQVEDELKHEEELEELLQFTQGLDFGRYIKDAEVQSMIDQVKRRILELEGQPEVDEESPEDENDGSGDRGQGQDDDPLDEAEIRMQAKVMKLTDKNLATLE----DASDRTGA-RNLREEDDNISIARTALSEGGRSVRSIHSTRSLAAVAEKARVSIIRGGXXXXXXXXXAPARLEKGLSSTLSGGGNRDMPVNDIVVVTHQDDGGLRRGGKNTVSNLPYIRRNPAL 471
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A836C827_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C827_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.990e-66 Identity = 191/484 (39.46%), Postives = 264/484 (54.55%), Query Frame = 1
Query: 13 TQGMMLSERPSEKAGDS-TATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKG----GAVVAAAAKNVFLTGVVKSELGYSGR--ALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNV---RNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGD----DNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGS-ISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
TQGMML+ERPS + D+ TA P SIGNYKGVMLCNRPF G + AA+ GAV A A + F+TGVV++E+GYS A + K+V+K+ AL RH+RWLADLQ TK LE+QY+ + +KEE ++F+ERE+R+RR G+V R+ E A G DD+ + + +K + S ++ + R RK RPKWA+TE A A D+ + E+++LL FT+ LDF+KY+RDAE+Q+MI+Q+K+RI E+E++ +N D A DG + D+ E +I++LT NL KR A G D +S+ART L+EGG S+RS+HS +SLAAV E+A+ ++ A+ + +E S P N E V + V HKDDGGLRLGGKN +SNLPY+ RNPAV
Sbjct: 4 TQGMMLAERPSGLSNDAGTAGGAP--------SIGNYKGVMLCNRPFGGVSAAARETREKGAVSATAGR--FVTGVVQTEVGYSSAQAASKGTRVVCKKVRKDNALARHRRWLADLQRTKDALEKQYIEELEQKEEAARKFSERESRMRRMY-------------IATGSVYPDRHHEPHAPADVAGSDDEREHIYDE---------------------DKAQQQSHGSSPEADDHRED---RKHKSASARPKWALTEAKAAAVDQEAEDAEVEELLAFTKSLDFDKYLRDAEVQAMIDQVKRRIQELEREAAAXXXXXXXXEGENGDPDEASDGAE-DDAEAAMAERILRLTAANL----KRVDGAPDGDEPDDTASV----LSMARTVLTEGGRSVRSVHSAKSLAAVVERAQTRLVTVAQQQQQQEGRS-----PVANVRESGFV----VKVAEHKDDGGLRLGGKNTVSNLPYMHRNPAV 422
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2WRE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRE5_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.880e-52 Identity = 171/471 (36.31%), Postives = 234/471 (49.68%), Query Frame = 1
Query: 16 QGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTD---SAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
QGMML+ERP D++ ++G + + + SIGNYKGVMLCNRPF G AA+ A AK F+ G V S +G GR ++D KR KKETALTRH++WLA+LQ TK ELE+ Y+ + +KEE+KKRF REAR+R + E + V G + D E KAG + + +S + + L AAEKRR++ G RP WA+TE A+ E E + +LL F + LDFEKYI D EIQ+M++Q+K RI E+E DE Y + +EVR +A+ LT + + ++ A G VD D +D MSVA LSE L ++HS +S+AA+ K +IS EP AV + +V+H DD G RL K+ I LPY+ RNP+V
Sbjct: 65 QGMMLAERPQ----DTSISSGM-IGSSPSVSIGNYKGVMLCNRPFAGVQAAAQHQAS-GGPAKAAFVCGNVPSAIGAGGR--RSDLSLVKRTKKETALTRHRKWLAELQRTKVELEKNYLEELHQKEESKKRFMAREARMRALVTQANAAEPKAEEAAV-------ATGGALAAMAAAKDAAEF-DGKAGPLEGKGEESPKASAXXXXXXXXXXXLSSAAEGDAAVALAAAEKRREKQGKVSRPMWALTEDKAHEASEKKEEDDAMELLAFAQNLDFEKYIDDMEIQTMMDQVKARIGELEIM--ADEEY----------------EASEVRGEARPHTLTAEKIAQLQ-----AKYGVSVDEDKD--EDTMSVASRVLSENKG-LGAVHSQKSVAAITAKKMEAISE----------------------EPISSAVPEPRIVSHPDDEGTRLANKSTIQKLPYMNRNPSV 471
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2FR48_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FR48_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.410e-40 Identity = 138/376 (36.70%), Postives = 198/376 (52.66%), Query Frame = 1
Query: 106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPR------KRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIR---RAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDN-MSVARTALSEGGWSLRSIHSTRSLAAVA 1203
SIGNYKGVMLCNRPF G A AA+ AK F+ G V +G + PR KR KKETAL+RHK+WL DLQ TK++LE+ Y+ + ++KEE KKRF ERE+++R RA+R+ GD+ V + A ++ + A +P E + E E E+ + EL AAEK R++ G RP WA+TE A E E + +LL F + LDF+KYI D E+Q+MI+Q+K RI E+E D D L+ EV+ +A+ LT +++R ++++ GV ++ +PADD+ +SVA++ LS L +HST+S+AAVA
Sbjct: 19 SIGNYKGVMLCNRPFAGVAAAAQNAG---GPAKAAFVCGTVPGHMGANA-------PPRDLAVTVKRTKKETALSRHKKWLQDLQSTKNQLEQSYLDEIKRKEEAKKRFMERESKMRAVIRASRD--------GDSTV----------LSAT----------MSASMA--VPAENKAERSDAKEEVPEDDEEEIAVA----VELAAAEKLREKQGRANRPAWALTEDKAKEAAEKQEEDDTAELLEFAQNLDFDKYIDDMEVQAMIDQVKTRINELEIMKDED------------------LEAEEVKGEARPHTLTEESVRRLQEK-------YGVAAEEKPADDDAISVAKSLLSN--TDLNKVHSTKSVAAVA 323
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2GJB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJB4_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.980e-37 Identity = 135/437 (30.89%), Postives = 188/437 (43.02%), Query Frame = 1
Query: 118 YKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTD-NQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNAN-AEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVA-EKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
YKGVMLCNRPF G A AA G V K F+ G V ++G + + N KR KKETALTRHK+WL DLQ TK ELEE Y+ + + KEE+KKRF E EA+ R A + + G +P WAMTE NA A D+ + E E+D LL F +GLDF+KYI D E+ +MI Q+K RI E+E ++ +++ E+R + + L+ +++ ++ + + D DD +SVAR+ L + ++ +HS +S+ A+A K G I+ A+ E REAP +VTH DD G RL K + NLPY+ RNP V
Sbjct: 1 YKGVMLCNRPFAGAAAAANTG--VGGVTKTAFVCGNVPDKIGTNVPVGTREVNTAVKRTKKETALTRHKKWLRDLQRTKDELEETYVNEMKSKEESKKRFMESEAKKR--------------------------------------------------------------------------------------ANRNESKTGEATKPMWAMTEENAKEASDQKEEEDEMD-LLNFAKGLDFDKYIDDMEVSTMIEQVKNRIGELE------------------TMNEEEVAAQEIRGENRPQTLSEQSIAKLQAKYGDVPRAEEKD------DDAVSVARSVLGDDA-KMKGVHSQKSVTAIAARKGLGKITEAKEEEKREAPR----------------------IVTHTDDDGTRLANKKEVHNLPYMNRNPCV 301
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S3HD88_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD88_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.830e-35 Identity = 139/450 (30.89%), Postives = 221/450 (49.11%), Query Frame = 1
Query: 76 GPGVALAAT-GSIGNYKGVMLCNRPFTGT-AMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
GP +++ GSIGNYKGVMLCNRPF GT A A GG+ K F GVV G + + + + K K + L +HK+WL+DLQ TK LE +Y+ + ++KEE++++F + E ++R AAR + D + E HG +D G D ++ A+AK +TS +DSA A K +++ P WAMTE+ A+ + E E D LL F +GLDF+KY+ D E+Q+++ +++KRI ++E+ +++ D A+ +R + M +T +LR+ ++R+ Q + A AL + ++++HST+S+AA+ + A+ I+ +A P GV +N+ ++VTH G RL KN +S LPY+ RNPAV
Sbjct: 15 GPSISMVENMGSIGNYKGVMLCNRPFGGTVANKAPGGS---GGEKTTFNCGVVSEPAGLNV-PIGSKQKVLKYTNKNSVLAKHKKWLSDLQKTKDRLEVEYLEEAKRKEESQQKFQDHEKKMRLAARTALRTGDDEKDAKDAKGSGPESHG--GYDFG---DGEDKAQAK---------------------------YTS-SDSATAAAGSKHQQQQAKPA---WAMTEKAADNQFEDLLMNEEDDLLDFAKGLDFDKYMGDIEVQTVMERLRKRIADLERDVALEDSRNSDAETRAA-----------MRAKLEQMGITEASLRNEDQRD-------------QSEESAALTAARALLDSEEDMQAVHSTKSVAALLKSAKDKIAQVKA----------SVHP---GVAAEPKILNEPIIVTHDPSEGSRLEVKNALSKLPYMNRNPAV 387
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: F0YGQ4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ4_AURAN) HSP 1 Score: 128 bits (321), Expect = 8.110e-30 Identity = 101/275 (36.73%), Postives = 139/275 (50.55%), Query Frame = 1
Query: 106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYS------GRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVR-NEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIE 909
SIGNYKGVMLCNRPF G +KG VAA+AK F+ G V + G + +A TD PRK ETAL RH++WLA+LQ TK +LE+ Y+ D + KE+ KRF EREAR+R R+ + D+ +D + +EHG + + KA D R E + + D K P RP WA+TE+ A + + + E D LL F GLDF+KYI D+E+ ++I ++ RI E+E
Sbjct: 8 SIGNYKGVMLCNRPFVGMVGTSKG---VAASAKQAFVCGNVGDKPGTNVPISSKEKAATTDQHPRK----ETALQRHRKWLAELQATKEQLEKHYLADVQMKEDRHKRFMEREARMRAMVRKAK-------DSVLDFESQAKDEHGEET----------SVEKASFEDSTR-------------------ETYPTVADG----------KSPAPPSRPMWALTEQQALSSVDCAEKNEADDLLDFANGLDFDKYISDSEVSALIENVRSRITELE 229
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A1V9ZJS8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJS8_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.930e-28 Identity = 128/438 (29.22%), Postives = 193/438 (44.06%), Query Frame = 1
Query: 106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
+IGNYKGVMLCNRPF + +K V +A K FL G+ S +G + KR KK TAL++HK+WL DLQ + LEE M DE KEE K+RF++REA +R R+ ++ DDD KA G RP WA+T+ A+ + + + ++++D LL F LD + ++ D E+++ + + +++ +++K V++ D+ + ++ E +V N A + +L K G DSD DD SVA T LSE S+RS+HS+RS+ A+ +A ++ + LE P N VVTH ++GG+RL K+ SNLPY+ RNPAV
Sbjct: 1163 NIGNYKGVMLCNRPFNSVSTVSK---EVDSAKKAPFLGGIQPSHVGQNVPIFNESPHAVKRDKKNTALSKHKKWLYDLQKERERLEEVLMEDEASKEERKERFSKREAEMRNKVRQRMPQD--------------------------DDD-----KAIRG-------------------------------------------------RPAWALTKDKADCKRDQEEDEDVDHLLEFANNLDIDAFMDDVELKAQVAHVDEQMAQLQKL--VNQEEADEKKQEVKELLQNESLERQVLNAANLSRLDTK----------------GNDSDD---DDAKSVASTVLSECK-SIRSVHSSRSVLALTRRAEQKLT-----------THLESIPEPN-------------VVTHDEEGGMRLQNKHLTSNLPYMHRNPAV 1471
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A024UN36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN36_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.480e-26 Identity = 122/443 (27.54%), Postives = 192/443 (43.34%), Query Frame = 1
Query: 106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAA----AAKNV-FLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
+IGNYKGVMLCNRPF G G ++K+ FLTG+ +G + KR KK TAL++HK+WL DLQ + LEE MVDE +K++ + RF++REA R R EE D+A+++ ++ RP WA+T+ A+ + D E+++D+LL F LD + ++ D E+++ + Q+ +++ ++++ V++ G++ + + E ++ N A + +L D+ DD +SVA T LSE S+RS+HSTRS+ A+A +A + R V E S P+ VVTH ++ G+RL K+ SNLPYI RNPA+
Sbjct: 134 NIGNYKGVMLCNRPFNGVV---SGPPTTLKDTDHSSKHAPFLTGIQPPPIGQNVPIFNEPLHAIKRDKKNTALSKHKKWLHDLQKERDRLEEALMVDEEEKQKRRDRFSKREAEFRAQVRRTNPEE---------------------------------------------------------------------DAADVKGSK----------RPMWALTKETADEKRVRDEEEDVDRLLDFANNLDLDSFMDDVELKAHVAQVNEQLAKLQEV--VNQEEGEERKAEVKEMLQAERAERQMLNAAALSRLDT------------------ADAKGYVDDDAVSVASTVLSECK-SIRSVHSTRSVMALARRAEDKLLNGRLTTVPEGASGAVPSPH---------------VVTHDEECGMRLQNKHLPSNLPYIHRNPAI 458
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A8J2WVF2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVF2_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.010e-23 Identity = 98/276 (35.51%), Postives = 128/276 (46.38%), Query Frame = 1
Query: 106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELG----YSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPD 921
SIGNYKGVMLCNRPF G +K G A AK F+ G V ++LG S + NQ R +KETAL RH++WLA+LQ TK +LE QY+ D +KKE K+F +REA++R R+ D R G D+D K + + V E+ S A AA G+ RP WA+TE A E D LL F LDF+KYI D EI +++ ++ RI E+E D
Sbjct: 8 SIGNYKGVMLCNRPFVGAVSQSKKGG---APAKQAFVCGKVDNKLGATIPISKGKIAKINQ---RSRKETALQRHRKWLAELQATKDQLEMQYLKDIQKKETKHKKFMDREAKMREVVRKVR-------DDRTYGCA----------------DLDSQEKYDKNQV---------------NDNVVMEVELS--PEASSGAA-------GDSSRPMWALTEDQAKEFAGGIETAEADDLLSFANSLDFDKYINDTEISALVQNVRSRICELEAYQD 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18547.5016.1 >prot_H-elongata_contig18547.5016.1 ID=prot_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=474bp MVLPTQGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPFback to top mRNA from alignment at H-elongata_contig18547:1135..2998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18547.5016.1 ID=mRNA_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1864bp|location=Sequence derived from alignment at H-elongata_contig18547:1135..2998+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18547:1135..2998+ >mRNA_H-elongata_contig18547.5016.1 ID=mRNA_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2844bp|location=Sequence derived from alignment at H-elongata_contig18547:1135..2998+ (Himanthalia elongata Himel1 dioecious)back to top |