mRNA_H-elongata_contig18544.5012.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18544.5012.1
Unique NamemRNA_H-elongata_contig18544.5012.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: D7FU38_ECTSI (NMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU38_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 4.970e-59
Identity = 106/134 (79.10%), Postives = 116/134 (86.57%), Query Frame = 1 
Query:    1 PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 402
            P+  P   QVISSG+SYEK AGYSRAVRVGKHVQVAGTTA  PDGSGVLC GDV GQTQYIFHIIALALREA C+LENVVRTRM+VT+I N +KVMAEH K+FS IRPAAT++ VS+LV P LLVEIEADALEP
Sbjct:  423 PVRAPGTRQVISSGSSYEKMAGYSRAVRVGKHVQVAGTTATDPDGSGVLCIGDVGGQTQYIFHIIALALREAGCSLENVVRTRMYVTDIKNAEKVMAEHCKVFSSIRPAATLVSVSSLVHPDLLVEIEADALEP 556
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A6H5JZB1_9PHAE (NMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB1_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.510e-57
Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 1 
Query:    1 PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 402
            P+  P   QVISSG+SYEK AGYSRAVRVGKHVQVAGTTA  PDGSGVLC GDV GQTQYIFHII+LAL+EA C+LENVVRTRM+VT+I+N +KVMAEH ++FS IRPAAT++ VS+LV P LLVEIEADALEP
Sbjct:  527 PVRAPGTRQVISSGSSYEKMAGYSRAVRVGKHVQVAGTTATDPDGSGVLCIGDVGGQTQYIFHIISLALKEAGCSLENVVRTRMYVTDIENAEKVMAEHCRVFSSIRPAATLISVSSLVHPDLLVEIEADALEP 660
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A534LG02_9EURY (RidA family protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A534LG02_9EURY)

HSP 1 Score: 126 bits (316), Expect = 8.680e-35
Identity = 69/122 (56.56%), Postives = 85/122 (69.67%), Query Frame = 1 
Query:   31 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 396
            ++SG  +E   GYSR VR+G HV VAGTTA  PDG  V+  GD  GQ  +IF  +  AL EA   LE+V+RTRMFVTNID+ +KV   H + F  IRPAAT+L VS L+DP +LVEIEADA+
Sbjct:    6 VASGGRWEPIVGYSRVVRIGNHVAVAGTTATDPDGK-VVAPGDAYGQAVHIFRTMEAALAEAGAQLEDVIRTRMFVTNIDDWEKVGRAHAEFFQQIRPAATLLQVSRLIDPQVLVEIEADAI 126
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: UPI0019927D90 (RidA family protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=UPI0019927D90)

HSP 1 Score: 120 bits (302), Expect = 1.150e-32
Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = 1 
Query:   19 PCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 396
            P Q ISSGT +E+T GYSRAVRVG HV V+GTTA    G  V   GDV  Q+QYIF  I  AL EA   L +VVR RMFVT+ID+ + V   H ++F+ IRPA+T++ VS L+DP  LVEIE DA+
Sbjct:    2 PRQNISSGTPWERTVGYSRAVRVGNHVMVSGTTASDEQGV-VQGIGDVYAQSQYIFAKIERALIEAGATLGDVVRVRMFVTDIDHWEAVGKAHGEVFAAIRPASTMVEVSRLIDPAHLVEIEVDAI 126
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A6I3L542_9NOCA (RidA family protein n=1 Tax=Nocardia aurantiaca TaxID=2675850 RepID=A0A6I3L542_9NOCA)

HSP 1 Score: 120 bits (302), Expect = 1.380e-32
Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 1 
Query:   25 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 402
            Q++SSG  +E   GYSRAVRVG+ V VAGTTA +PD SG +   D+  QT+     IA AL E   ++E+V+RTR+FVT+I   ++V   H ++F+ IRPAAT++ VSAL+DP LLVEIEADA+ P
Sbjct:    5 QIVSSGAQWEPIVGYSRAVRVGQWVSVAGTTAATPD-SGPVGGDDIAEQTREALRRIAAALAEVGASVEDVIRTRIFVTDISRWEEVGKAHGEVFAEIRPAATMVEVSALIDPALLVEIEADAVIP 129
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A2V9RCU1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9RCU1_9BACT)

HSP 1 Score: 119 bits (299), Expect = 3.010e-32
Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 1 
Query:   31 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADA 393
            ISSGT +E   GYSRAVRVG H+ V+GTTA  PDG   + AGD   Q       IA AL +A   LE+VVRTRMFVTNI + +KV   H ++F  IRPA +++ VSALVDP +LVEIEA+A
Sbjct:    6 ISSGTPWEPVVGYSRAVRVGPHIHVSGTTATGPDGE--IVAGDAYAQAVQTLKNIASALEKAGAKLEHVVRTRMFVTNIADWEKVGRAHGEVFGEIRPATSMVAVSALVDPKMLVEIEAEA 124
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A386ZLA6_9NOCA (RidA family protein n=1 Tax=Nocardia yunnanensis TaxID=2382165 RepID=A0A386ZLA6_9NOCA)

HSP 1 Score: 119 bits (297), Expect = 6.810e-32
Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 1 
Query:   25 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 402
            QV+SSG  +E   GYSRAVRVG+ V VAGTTA + +G G +   D+  QT+     IA AL E    +ENVVRTR+FVT+I   ++V   H ++F+ IRPAA++L VSAL+DP LLVEIEADA+ P
Sbjct:    8 QVVSSGAVWEPIVGYSRAVRVGQWVSVAGTTAAA-EGGGAVGGDDIAEQTREALRRIAAALAEVGAGVENVVRTRIFVTDISRWEEVGKAHGEVFADIRPAASMLEVSALIDPELLVEIEADAIVP 132
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A7K1V2Y8_9NOCA (RidA family protein n=1 Tax=Nocardia terrae TaxID=2675851 RepID=A0A7K1V2Y8_9NOCA)

HSP 1 Score: 118 bits (296), Expect = 8.590e-32
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 1 
Query:   25 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 402
            QV+SSG ++E   GYSRAVRVG+ V VAGTTA +PDG GV+   D+  Q +     I  AL E     E+VVRTR+FVT+I   ++V   H ++F+ IRPAA++L VSAL+DP L+VEIEADA+ P
Sbjct:    4 QVVSSGAAWEPIVGYSRAVRVGQWVSVAGTTAATPDG-GVVGGDDIAEQAREALRRIVAALAEVGAGPEHVVRTRIFVTDISRWEEVGKAHGEVFADIRPAASMLEVSALIDPALMVEIEADAVVP 128
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: UPI0019B846B8 (RidA family protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019B846B8)

HSP 1 Score: 118 bits (296), Expect = 8.840e-32
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 
Query:   31 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 396
            ISSG S+E   GYSRAVRVG +++V+GTTA++  G  ++ AGD+  QT +IF  I  AL EA C+L++VVRTRMF+TNIDN K+    H + F  I+PA+T++ V  L+ P LL+EIEA A+
Sbjct:    7 ISSGASWEDIVGYSRAVRVGDNIEVSGTTAMN--GDTIIGAGDLYAQTIFIFQKIEKALLEAGCSLKDVVRTRMFITNIDNWKEAGRAHAEFFGAIKPASTMIEVQRLIHPELLIEIEATAI 126
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BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A7V5WQE4_9DEIN (RidA family protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A7V5WQE4_9DEIN)

HSP 1 Score: 118 bits (296), Expect = 9.650e-32
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 1 
Query:   31 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 396
            ISSG  +EKT GYSRAVRVG  V VAGTT++  DG+ ++   D   QT+ +  IIA AL EA  +L++VVR+RMFVTNID+ + +   H ++F  IRPAAT+L VS L++P +LVEIE DA+
Sbjct:    5 ISSGAVWEKTVGYSRAVRVGNQVFVAGTTSVDKDGN-IVGENDAYLQTKRVLEIIAAALNEAGASLKDVVRSRMFVTNIDDWQAIGKAHGEVFGDIRPAATMLEVSKLINPKMLVEIEVDAI 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU38_ECTSI4.970e-5979.10NMO domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JZB1_9PHAE1.510e-5776.87NMO domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A534LG02_9EURY8.680e-3556.56RidA family protein n=2 Tax=cellular organisms Tax... [more]
UPI0019927D901.150e-3256.35RidA family protein n=1 Tax=Armatimonadetes bacter... [more]
A0A6I3L542_9NOCA1.380e-3253.17RidA family protein n=1 Tax=Nocardia aurantiaca Ta... [more]
A0A2V9RCU1_9BACT3.010e-3256.20Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A386ZLA6_9NOCA6.810e-3253.97RidA family protein n=1 Tax=Nocardia yunnanensis T... [more]
A0A7K1V2Y8_9NOCA8.590e-3253.17RidA family protein n=1 Tax=Nocardia terrae TaxID=... [more]
UPI0019B846B88.840e-3252.46RidA family protein n=1 Tax=Pyrinomonadaceae bacte... [more]
A0A7V5WQE4_9DEIN9.650e-3254.10RidA family protein n=1 Tax=Trueperaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18544contigH-elongata_contig18544:3681..6862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.7
Seed ortholog evalue4.4e-49
Seed eggNOG ortholog2880.D7FU38
KEGG rclassRC02541,RC02759
KEGG koko:K00459
KEGG ReactionR00025
KEGG Pathwayko00910,map00910
GOsGO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0008150,GO:0009410,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.2-nitropropane dioxygenase
EggNOG OGs2RHJM@2759,COG2070@1
EC1.13.12.16
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEndoribonuclease L-PSP/chorismate mutase-like
Ec32 orthologEc-25_000760.1
Exons4
Model size405
Cds size405
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18544.5012.1prot_H-elongata_contig18544.5012.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18544 3681..6862 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930060.4172635-CDS-H-elongata_contig18544:3680..37431622930060.4172635-CDS-H-elongata_contig18544:3680..3743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 3681..3743 -
1691679265.497015-CDS-H-elongata_contig18544:3680..37431691679265.497015-CDS-H-elongata_contig18544:3680..3743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 3681..3743 -
1622930060.4309962-CDS-H-elongata_contig18544:5204..53331622930060.4309962-CDS-H-elongata_contig18544:5204..5333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 5205..5333 -
1691679265.5159037-CDS-H-elongata_contig18544:5204..53331691679265.5159037-CDS-H-elongata_contig18544:5204..5333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 5205..5333 -
1622930060.4439127-CDS-H-elongata_contig18544:6415..65261622930060.4439127-CDS-H-elongata_contig18544:6415..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 6416..6526 -
1691679265.5354545-CDS-H-elongata_contig18544:6415..65261691679265.5354545-CDS-H-elongata_contig18544:6415..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 6416..6526 -
1622930060.4604356-CDS-H-elongata_contig18544:6760..68621622930060.4604356-CDS-H-elongata_contig18544:6760..6862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 6761..6862 -
1691679265.5454972-CDS-H-elongata_contig18544:6760..68621691679265.5454972-CDS-H-elongata_contig18544:6760..6862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18544 6761..6862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18544.5012.1

>prot_H-elongata_contig18544.5012.1 ID=prot_H-elongata_contig18544.5012.1|Name=mRNA_H-elongata_contig18544.5012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLC
AGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHN
KIFSVIRPAATILVVSALVDPGLLVEIEADALEP*
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mRNA from alignment at H-elongata_contig18544:3681..6862-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18544.5012.1 ID=mRNA_H-elongata_contig18544.5012.1|Name=mRNA_H-elongata_contig18544.5012.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3182bp|location=Sequence derived from alignment at H-elongata_contig18544:3681..6862- (Himanthalia elongata Himel1 dioecious)
CCACTCGTTTTGCCATCTCCCTGTCAGGTTATATCGTCGGGCACGTCGTA
CGAAAAAACAGCGGGATACAGCCGAGCTGTTCGCGTCGGAAAACACGTAC
AGGTGAAAAAAATCCCTCTCGTAAAGGCGTGGAACATCGCGCCCGCGCGG
TTTAAGGGGGCGCCGAATGAATTAACTACTCTATACTAAATACTTACGGT
TATTTTAGCGGATGGTTTATTTATTTATTCATTTTACCTTAACCCAGCGG
CGAACAGATTCCTTTTCCCCCTTCCTCTCTTCCCGTCAACTTCGACACGC
CTCACGTGTTGCAACTCCGATTGCCATTGCCATCAGGTGGCCGGGACGAC
TGCCATCAGCCCCGACGGGTCGGGGGTGCTGTGCGCTGGAGATGTGGAGG
GCCAGACGCAGTATATATTCCATATCATAGCCCTCGCTCTCAGAGAGGTA
AGAGGTAAAATCGTCTTCGGGCGGTAATGCTGATGCCGATGCTGATGCCG
ACGATCGCCCGTACCCTTGTGTAAGAAATATAAAGAAAAATAACGCCCGG
AGAGGAGTGTTGTGTGGGATTTGGAGCGATTGGCGGCATTTGTTCAGTTG
GCGGTCTTTTGCGCTTTTTTTATTTCAAATTGCAGTGTCAGTTAACGCTA
TTAATCTTTGCATGATTATGATGATGATTATTATTATTAATTTATTATTA
TTATTGCTGTTATTATTATTATTATTATTATTATTATTATTATTATTATT
TTGAAAAACATGCACTCATTCCAACTCTACAAACAAACATTGACGTCTTC
TTAGCACCGTGAGAGGTAAAGTCCAGGAGACTAACTATCGTCGGGTTCGA
ATGTGTACATTGCTACCTTTGAGCACAAAATCGTCACGTGAGTATAAGAA
AAAACAAACAAAAACATATACTATATATATGTATATATATATATATATAG
GTATATGTTGTTTTCTACAAACATAAGATCTAAACTAGATGTAGTCATGA
TTATGATGATTATGATGATTATGATGATTATTTTTATTATTATTATTATT
ATTATTATTATTATTATTATTATTTATCCCTTAACTCTTGATAGCCTAAT
ATTATCATAGTCAAGTTTGTTATTTTATTTTTTGATTGAAGAATGAAAGG
CCTATTATCATAGCCTATTTTGTTACCCGTGCGAGCGGGTCATTATCATC
TCTCATATAGTCCTTGAGGGAAGCTATCGCAGATCAGGTAGGCCTCTGCA
GTTAGTTTATTGTATCATCTGCGATAGCTTTTTGTTCTCTTGTTGTCATA
CTCTCTTTAGATGTTATCGCTTTAAAATACAACATACCACGCTTCCCGTC
TCGCCCAAGGGGCATATGACGTAACATGGCGTCATATGACGTAAATCAAT
GTCAATATCAATGCCGAATAGCCACACAGAGCAAGGCAAGGCAATGTAAG
CGATGAACGACGTCGGTACTCTATTGTCGTCGGTAATCCATTGCCGTCGG
CCCCTCGCGCTTTTCTCTGTTTGGCCCAGGCTGACTGTGCCCTCGAGAAC
GTAGTGCGCACTCGGATGTTTGTGACCAACATCGACAATATCAAGAAGGT
CATGGCTGAACATAACAAGATATTCAGCGTTATTCGCCCGGCGGCAACCA
TTCTTGTGGTGAGAAAGAGAGGGAGGGTGGGGGGATTGGGCGAGTATGGC
GCCAGATACGCCTGGAGAGTACGCACTTTTCTGTCATAGTCCATCTCTCT
TTCTCTCGCGGTCATAGTCTATCTCTCTTTCTCTCTCTCAGTCATAGTCT
CTCTTTCTATGTCATAGCCTCTCTTTCTATGTCATAGCCCCTCTCTGGCA
TACTAATCTCTCTATATATTCATACTGGTTGACGGAAAGGAGAAGTTTTG
GAAGCGTTGGTTGAAAGTGTATGACACAAAATACTAGAGCTAGAAGAGTT
TTTAATACTGTTTCAAGTGTGCGTGTACGTGTGTGTGTATATTTATTACA
TTGAACATAACCACACAATCCGGCCCTATCATGACACTTTCGCCTTGGTC
CTCCTCTCAATGAGGGGATCAATCATGTTTGCAACGAAAACCTCTGATCA
GACGTGACAAAGGAGACACATACTATCTCTCTCTCTCTACGTGTTGTATT
TAAGCCATCAATACCTTGCGCTTCCCTCTCTACTTCCATGTCCTCTCTCT
CTATAGCTTCGGTTGGCCCCTATTGGACCAATGCTCTCCCGTCTACTATT
TGTTTTTGCTACTATTACCCAACACTTCCCCCCGCTTTCTACCGTCTTAC
ACTTCTCTCCCAACCCCTCCCCGATCCCGCCCCTCGCTTCCCGCCCCTGG
GCTTGGTTATTCGCATGAGACGACGTTCCCACTGAGGCGTCGGGTCTTGC
GGCTGTTAATGTAGATTAACCGTTGGCGGCACCCCCTCTCTCGCGTCCTG
TGTGTATGTCTATGTCTAGGTGTATGTGTGTGTATTTATTAAATTGCACA
TAACCGCTAAGGCAATCCGGCTCTGTCATGCTAGATCTTCTAGGCTACTC
TATTAATAGCATTGATCCTCCCAATGGGGGATTCAATCATATTTGCTACA
AAAATATCTGATCAGCCGTGTCAAAGGAGACATACTATCGCTACATTTCG
TATCTGAACCGTCTGTATGCGTCTGTATGTGTTTGTGTGTGTAATGATAA
TGGCTGAATCGATTGTGGGTTATGATAATGGTTAGAGTTAGAAAAAAGGC
TATATGGAGCGGATTGAACACTGGACGTGAATAGTAGCGGCTGGCAAGGG
GAGCAATCCCTCCTCGGAGTGAAAGTGCCGGGTCCTTCGGACGACATGAC
TACGTAGCTTTTGTGATAAGCGTATAATTAACCAAGTAGACTGTATTAGA
CTACGAGTCAGCGCTGCACCAGCCATACACACACATACGTACATAAATTC
TGCAGTCTGTGCGGACTACGAGACAAATTTGGTAAATTTCGCCTTTGTCC
TTACGATAATGTACCCTGACGCCTGGCGTCACCCACCCACTCACTCGAAA
AAAACACCGGGGAGAGGGGAAACTAAACCCCTGTCCCCTTTTTCTGGAAC
CGTTTAATGCCTCTGTCAGGTGAGCGCTCTGGTGGACCCGGGCTTGCTAG
TCGAAATTGAGGCGGACGCCTTAGAGCCCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig18544:3681..6862-

>mRNA_H-elongata_contig18544.5012.1 ID=mRNA_H-elongata_contig18544.5012.1|Name=mRNA_H-elongata_contig18544.5012.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig18544:3681..6862- (Himanthalia elongata Himel1 dioecious)
CCACTCGTTTTGCCATCTCCCTGTCAGGTTATATCGTCGGGCACGTCGTA
CGAAAAAACAGCGGGATACAGCCGAGCTGTTCGCGTCGGAAAACACGTAC
AGCCACTCGTTTTGCCATCTCCCTGTCAGGTTATATCGTCGGGCACGTCG
TACGAAAAAACAGCGGGATACAGCCGAGCTGTTCGCGTCGGAAAACACGT
ACAGGTGGCCGGGACGACTGCCATCAGCCCCGACGGGTCGGGGGTGCTGT
GCGCTGGAGATGTGGAGGGCCAGACGCAGTATATATTCCATATCATAGCC
CTCGCTCTCAGAGAGGTGGCCGGGACGACTGCCATCAGCCCCGACGGGTC
GGGGGTGCTGTGCGCTGGAGATGTGGAGGGCCAGACGCAGTATATATTCC
ATATCATAGCCCTCGCTCTCAGAGAGGCTGACTGTGCCCTCGAGAACGTA
GTGCGCACTCGGATGTTTGTGACCAACATCGACAATATCAAGAAGGTCAT
GGCTGAACATAACAAGATATTCAGCGTTATTCGCCCGGCGGCAACCATTC
TTGTGGCTGACTGTGCCCTCGAGAACGTAGTGCGCACTCGGATGTTTGTG
ACCAACATCGACAATATCAAGAAGGTCATGGCTGAACATAACAAGATATT
CAGCGTTATTCGCCCGGCGGCAACCATTCTTGTGGTGAGCGCTCTGGTGG
ACCCGGGCTTGCTAGTCGAAATTGAGGCGGACGCCTTAGAGCCCTGAGTG
AGCGCTCTGGTGGACCCGGGCTTGCTAGTCGAAATTGAGGCGGACGCCTT
AGAGCCCTGA
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