mRNA_H-elongata_contig184300.4969.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 4.210e-21 Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 YGDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
YG G WP L YER E+ NGNY EP+ ISVRHGICGDPEQT E +N YG NS YPV Y+EG ++E+
Sbjct: 63 YGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEI 133
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D7G892_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G892_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 5.380e-21 Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 YGDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
YGDG WPLL+ Y +GEM NGN+ E D IS RHGICGDP+Q A ES+N Y ++ S + LET EG V+++
Sbjct: 78 YGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFALESTNAYSSSLSDWSALETLKEGGVLDI 148
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.470e-20 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
GD WP + GE A NGNY+E D ++ RHG+CGDPEQTA E SN+YG NS YPVLETY EG ++EV
Sbjct: 42 GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEV 107
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 3.730e-20 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
GD WP + GE A NGNY+E D ++ RHG+CGDPEQTA E SN+YG NS YPVLETY EG ++EV
Sbjct: 71 GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEV 136
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.090e-19 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
GD WP + GE A NGNY+E + ++ RHGICGDPEQTA ESSN+YG NS YPV ETY EG ++EV
Sbjct: 74 GDKPWPHFN----GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEV 139
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 4.820e-19 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 YGDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
YGDG WPLL+ Y +GEM NGN+ E D IS RHGICGDP+Q + ES+N Y ++ S + LET EG V+++
Sbjct: 78 YGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDI 148
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 9.340e-19 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVME 210
GD WP + GE A NGNY+E + ++ RHGICGDPEQTA E SN+YG NS YPVLETY EG ++E
Sbjct: 73 GDKPWPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILE 137
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 6.090e-18 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVME 210
GD WP + G+ A NGNY+E + ++ RHGICGDPEQTA E SN YG NS YPVLETY EG ++E
Sbjct: 73 GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILE 137
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 8.040e-18 Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 4 GDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
GD WP + +G A NGNYLE D ++ RHGICGDPEQTA E N+YG N YPVL TY EG V+EV
Sbjct: 78 GDKPWP----HYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEV 143
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.130e-17 Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 1 YGDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDP---EQTADESSNRYGNANSYYPVLETYTEGSVMEV 213
YGDG +PL VY++GEMA NGNY+EP ISVRHG+CGDP +Q + N Y N +PVL+ + +G ME+
Sbjct: 44 YGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEI 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184300.4969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig184300.4969.1 >prot_H-elongata_contig184300.4969.1 ID=prot_H-elongata_contig184300.4969.1|Name=mRNA_H-elongata_contig184300.4969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp YGDGAWPLLSVYERGEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYback to top mRNA from alignment at H-elongata_contig184300:265..1241+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig184300.4969.1 ID=mRNA_H-elongata_contig184300.4969.1|Name=mRNA_H-elongata_contig184300.4969.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=977bp|location=Sequence derived from alignment at H-elongata_contig184300:265..1241+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig184300:265..1241+ >mRNA_H-elongata_contig184300.4969.1 ID=mRNA_H-elongata_contig184300.4969.1|Name=mRNA_H-elongata_contig184300.4969.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=426bp|location=Sequence derived from alignment at H-elongata_contig184300:265..1241+ (Himanthalia elongata Himel1 dioecious)back to top |