mRNA_H-elongata_contig1819.4873.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1819.4873.1
Unique NamemRNA_H-elongata_contig1819.4873.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: D7FRB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB7_ECTSI)

HSP 1 Score: 1052 bits (2721), Expect = 0.000e+0
Identity = 722/1275 (56.63%), Postives = 826/1275 (64.78%), Query Frame = 1 
Query:    1 QVKEICLNRDTSLLPEVIPMVADFQMDFNVGSRKFVASFMREIVRAHPEHVDLVVPVARNLMSDDNANVKKMAVLLANTVYRPALQRLVDDGSMESARQEWSALEGLSRHKVLSTITDPAGAADISMVAFKFAETVVLACVGGRGLGPGASRE-DRSVHRDLSPTHPFLLADTLDQAGHALARQMVGWLGTSSSGGGAGSTSAVGTTSAVKGATWGSGFRAQHYAALINALQSLATNRAALFPDIVPGLASALESVTAGRTTNPVTVTAPGGAVPEGLRDAASSLRSACLKLLKLAPGVSKGVQRLAAAAALAGSDGEAKAAVSGNSALRGRVILPARPRERTTETPPKTSPKTPSPQGRERLALADLA-ASACRRKVPKPPP-GYKHKRTPGFPLADLELLLGHVLNALGPDLATAKGDVASPQHAEGKA---PVNNKRPRSSRNCSGSQSNSSESRVEGGTKKRRSGDQHQNTGTGAVMNSNGQKEAS---------GNGRSPIDELGER--RSRQAGAASKVSPGDASEAXXXXXXXXXXXXXXX-------KKPEAADLTEAKRAFSRVLCVWEGAATEGKRGLHQRVIARLGRMLAQAEVEA-----ETKATGMDVQPAIDFFTEDYKRRYHAALTLLMDFYAADVVAATARVANSSSSKNGVETSEKNKDPAGDESGRAKRGQGFEVYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAVSRPHDVQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXX--VDFEXXXXXXVETPLPAP------------------PPAMIV-----ASPWLAPPETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAET---VRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAKGATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASA---KQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPMMKGVKESLRRYAQTLVKVDSGVRAVLGMEVGGAESVSKK 3645
            QVKEIC NRD SLLPEVIPMVA+FQ DFN   RKFVASF+RE+VR+HPEHV LVVPVA  LM D N +VKK+A+LLANT YRPALQRLVD+GS++ A+Q+WS LEGL R  VL+TI    G ADISMVA KFAE+VVLACVGGRGLGP ASR  D+SV RDLSP+HPFLLADTLDQAGHALARQMVGWLG                          + F AQHY+ LINALQ+LATNRAALF DIVP LA                                                                       AV GNS LRGR+ LPARPRER     PK +    +   R R  +A+LA +SA + K+P PPP GYK  RT GFPL DL+ LLGHVLNALGP+LATAK     P+ + G +    V +KR R S   SG          EGG K RRSGD     G+   +++     ++         G  + P   LG    +  +A AA + +       XXXXXXXXXXXXXXX         P    L  +K+AF RVL VWEG A EGKRGLHQ V+ARLGRMLA++E  A     +T  + M V   ++F T+DY++R+ AAL LL D Y ADV A                 +   +  A       K  +GF++YD ALL LLT LS SLE+TWRQKLFTQTLL+CPRVP AALE VC LC   + PHDVQTGLV LKDLIFHKPATR VC+PSVL  THHSDNDVRTKAVRL +NLLW DPAF  T+E FAKQALASVR PE   V+ K   XXXXXXXXXXXXXXXXXX  +DF XXXXXX                          PP         A PWLAPP+T   AR RLSLYFALCVKSR ML+GLLEA+VTA  AAK GL AELPLLARAAAKGFGE GVVGL+ A+P GAK L L MLDLLVP++TNKPS E+V AVRRLR+ R+ A AE    V+   +    +     ATGVEY+VP+LGGLGREGV  ELPALLQA D ++R  FRRLT PAKGATY PAELVV+LN  D   A VP+K LT ALSLCL+NK VYNY VLREALNVMSQVP  G +    KQ+PLLLMRTV++SV  F +LKNFVATVVLVRLVQ +VWT   +W GFLRC+KMMAKESGATSFIAMVQLP  +LKEALA+P+MKG+KE LRRYAQTLVKVD GVRAVLGME G  E+ +KK
Sbjct:   29 QVKEICFNRDRSLLPEVIPMVAEFQTDFNANCRKFVASFLREVVRSHPEHVGLVVPVASFLMHDSNTSVKKVAILLANTTYRPALQRLVDNGSVKGAQQDWSVLEGL-RKAVLNTINS--GPADISMVAIKFAESVVLACVGGRGLGPTASRGGDKSVQRDLSPSHPFLLADTLDQAGHALARQMVGWLGNGXX---------XXXXXXXXXXXXXASFGAQHYSLLINALQNLATNRAALFADIVPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXAVDGNSTLRGRIKLPARPRER-----PKAARAALT--ARNRRDVAELATSSASKGKMPHPPPPGYKQNRTKGFPLGDLDTLLGHVLNALGPELATAKNR-PPPEDSGGSSGAEAVGSKRARGS--TSGD---------EGGGK-RRSGD-----GSARAVSAPEPVRSTMEVDTVDKGGGAKQPQKVLGGAGGKREEARAAPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSDPGREGLETSKKAFRRVLGVWEGVAMEGKRGLHQGVVARLGRMLAESEATALAKGAKTSESEMVVAEVVEFMTKDYRKRFKAALALLTDMYVADVAAXXXXXXXXXXXXXXXGKAISRRAAA------KKPPRGFDLYDGALLRLLTALSGSLEATWRQKLFTQTLLECPRVPPAALELVCTLCDIAAHPHDVQTGLVALKDLIFHKPATRGVCIPSVLRFTHHSDNDVRTKAVRLTSNLLWKDPAFQTTIETFAKQALASVRPPEVNKVEKKXXXXXXXXXXXXXXXXXXXXXXLLDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXGGVPPAGPWLAPPDTAAAARVRLSLYFALCVKSRPMLSGLLEAYVTAIPAAKDGLKAELPLLARAAAKGFGEAGVVGLVAASPVGAKPLALLMLDLLVPRDTNKPSPEMVAAVRRLRETRLLAEAEAEAVVKEEEEEVGKVDEPSAATGVEYIVPILGGLGREGVMAELPALLQASDGVIRAAFRRLTQPAKGATYKPAELVVVLNQSD---ARVPIKNLTRALSLCLENKAVYNYPVLREALNVMSQVPTAGQNGGGVKQIPLLLMRTVMVSVATFPELKNFVATVVLVRLVQQQVWTSDGLWKGFLRCAKMMAKESGATSFIAMVQLPEKKLKEALANPLMKGLKEPLRRYAQTLVKVDPGVRAVLGMETGAREAATKK 1254
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A835YPU9_9STRA (Symplekin tight junction protein C terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.780e-54
Identity = 112/223 (50.22%), Postives = 151/223 (67.71%), Query Frame = 1 
Query: 2956 GVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAKGATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPP-PGASAKQ---LPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPMMKGVKESLRRYAQTLVKVDSGVRAVLGM 3612
            GVE++VPVLGGL  E     LP +L+A   +V   F RLT P      TP  L+V L++F+  A GVPMK+LT A+  CL+NK V++  V+REAL+ MS+    PGA  K    LPLL MRTVI++V  + +LK ++A  +L RLVQ +VWTQPR WDGF+R +K+M  E+GATSFIA++ LPA +L+E L +   KG+KE L+ YA  ++KVD  V+ VLGM
Sbjct:   46 GVEFVVPVLGGLAAEERDALLPQVLRALRPVVDAAFHRLTSPRAAPPVTPVGLLVTLHNFNIAATGVPMKKLTDAVGYCLENKAVFSSHVMREALDTMSKAAAEPGADGKGKRGLPLLFMRTVILAVQGYPELKQYIAVTLLPRLVQQEVWTQPRAWDGFVRIAKIMGTETGATSFIALMLLPAPQLREVLKTH--KGIKELLKSYAAGVIKVDPAVKEVLGM 266
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A6P5GCT6_ANACO (uncharacterized protein LOC109722179 isoform X1 n=6 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GCT6_ANACO)

HSP 1 Score: 150 bits (379), Expect = 7.900e-33
Identity = 139/526 (26.43%), Postives = 238/526 (45.25%), Query Frame = 1 
Query: 1990 VYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAV-SRPHD--------VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASV---RSPETKVVDVKKEEXXXXXXXXXXXXXXXXXX---VDFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAK--GATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEAL 3516
            +Y+K LL+L   L +S  ++   K F + L + P +P + L+ +  LC  + SR H         +  GL  +  LI  +P +R  C+   L    HS ++VRTK++RL AN L+P    +  +E FA   L SV   R  ET    V   E                     + FE                   + S  ++P  + + A+ + SL+FALC K   +L  + + +  +  A K  +   +P+L R+   G     ++ ++   P G + L++  L+ L   E + PS++L+  V+RL + ++   A                        ++P+L  L +E V    P L+       +    R+   +   G   TPAE+++ ++D +     V +K++T   + C + + V+   VL  +LN + +  P       LPLL MRTVI +V  F  L +FV  + L +LV  ++W  P++W GFL+C    A ++   SF A++QLP+ +L+ AL
Sbjct:  738 LYEKFLLSLAKALVDSFPAS--DKSFNRLLGEAPFLPDSVLKLLEDLCVNMHSREHHAKDSDGDRITQGLGAVWSLILGRPLSRQACLNIALKCAVHSQDEVRTKSIRLVANKLYPLHYASEHIEQFATNMLLSVVDQRVSETDDTSVSSREPKTEAGGIQETSISSSQNSEPIRFESDS----------------MKSSLVSPSVSLSQAQCQTSLFFALCSKKPSLLRLVFDIYGRSPKAVKQCIHRHIPILVRSL--GASNTELLNIISDLPDGGENLIILTLETLT--EDSTPSKDLIATVKRLYETKLKDAA-----------------------ILIPLLSSLSKEEVLPIFPRLVDLPLDKFQAALARILQGSAHTGPALTPAEVLIAIHDINPEKDRVALKKITDVCTACFEQRTVFTQQVLASSLNQLVEKVP-------LPLLFMRTVIQAVDAFPTLVDFVMGI-LSKLVSKQIWRMPKLWVGFLKC----AYQTQPHSFNALLQLPSPQLENAL 1206
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A5N5NNM0_9ROSI (Uncharacterized protein n=16 Tax=Saliceae TaxID=238069 RepID=A0A5N5NNM0_9ROSI)

HSP 1 Score: 149 bits (375), Expect = 2.790e-32
Identity = 143/558 (25.63%), Postives = 246/558 (44.09%), Query Frame = 1 
Query: 1990 VYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAV------SRPHD---VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETVARTR--LSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAKGATYT-----PAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPM-MKGVKESLRRYAQTLVKVDSGVRAVLGM 3612
            +Y+K LL +   L ++  ++   K F++ L + P +P++A + +  LCQ           HD   V  GL  +  LI  +P  R   +   L    HS +D+R+KA+RL AN L+     +  +E FA   L S  + E +  D+   +                  V                   +M  A P +    T +    +  +SL+FALC K+  +L  + + +  A    K  +   +P+L RA    + E  ++ ++   P G + L++ +L +L  + T  PS  L+  V+ L + ++                      AT    ++P+L  L +  V    P L+      +      L H  +G+ +T     PAE++V ++D      G+P+K++T A S C + + V+   VL +ALN M +  P       LPLL MRTVI ++  F  L +FV  + L +LV  +VW  P++W GFL+C      ++   SF  ++QLP ++L+ AL     ++G   +    A T   +     A+LG+
Sbjct:  954 LYEKFLLAVAKSLLDAFPAS--DKSFSKLLGEVPFLPESAFKLLDDLCQCDIFDSHGKEVHDGERVTQGLGAVWSLILGRPNNRLAFLDIALKCAVHSQDDIRSKAIRLVANKLYQLNYISQNIEQFATNMLLS--AVEQRASDINPSQSVSTDQVVSQEVSVSCSQVSETGNCEND----------SMKGAQPLVQSVSTMSFPEVQRHISLFFALCTKNPSLLQTVFDIYGQAPKTVKQAVHRHIPVLIRALGSSYSE--LLRIISDPPEGCENLLMLVLQILTQETT--PSANLITTVKHLYETKL--------------------EDAT---ILIPILSSLSKNEVLPIFPRLVGLP---IEKFQMALAHILQGSAHTGPALTPAEVLVSIHDISPNKDGLPLKKITDACSACFEQRTVFTQQVLAKALNQMVEQTP-------LPLLFMRTVIQAIDAFPSLVDFVMEI-LSKLVSRQVWKMPKLWVGFLKC----VSQTRPHSFHVLLQLPPSQLESALNKHANLRGPLATYANQANTKTSLPRSTLAILGL 1455
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: UPI001FB0A777 (uncharacterized protein LOC124929488 isoform X1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0A777)

HSP 1 Score: 148 bits (373), Expect = 4.310e-32
Identity = 139/523 (26.58%), Postives = 233/523 (44.55%), Query Frame = 1 
Query: 1987 EVYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAV---SRPHD---VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETV-----ARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAK--GATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEAL 3516
            E+Y+K LL L   L ++L +    K F++ L + P +  ++L+ +  LC +    S  H+   V  GL  +  LI  +P  R  C+   L  T HS +D+RTKA+RL  N L+     +  +E FA     S     T V +  KE                    D E        +      P   V     A PE+E+      A   +SL+FALC K   ++  L + +  A  A K  +   +P+L R       E  ++ ++   P G++ L++ +L +L   E +KPS +L+  V++L + ++                            ++PVL    +E V   +P L+       +T    +   +   G   TPAE++V ++D       + +K++T A + C + + V+   VL +ALN M +  P       LPLL MRT+I ++  F  L +F+  + L +LV  ++W  P++W GFL+C      ++   SF  ++QLP A L+ AL
Sbjct:  798 EIYEKFLLGLAKSLLDTLPAN--DKSFSRLLGEVPFLSDSSLKLLDDLCSSSYQSSSLHEGDRVTQGLGAVWSLILGRPPNRQACLNIALKCTVHSQDDIRTKAIRLVTNKLYVLSYISENIERFATDMFLSAIDQRTSVSESCKE-------------ICPENKPDREQGGKVTSVSGSQFSEPGKSVKGEQ-AGPESESSDSFAEAHRLISLFFALCTKKPSLIQLLFKNYAQATRAVKQVVHRHIPVLVRTLGSSCSE--LLHIVSDPPEGSENLLIQVLQIL--SEGSKPSPDLINTVKQLYETKIK-----------------------DASILIPVLSSFSKEEVLPIIPCLVDLPLEKFQTALAHILQGSAHTGPALTPAEVLVAIHDITPEKDSLALKKITDACTACFEQRTVFTQQVLAKALNQMVEQSP-------LPLLFMRTIIQAINAFPTLVDFIMEI-LSKLVTRQIWRLPKLWVGFLKC----VSQTQPHSFPVLLQLPVAPLENAL 1265
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A2P6PG16_ROSCH (Putative symplekin n=3 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PG16_ROSCH)

HSP 1 Score: 138 bits (348), Expect = 3.930e-29
Identity = 148/557 (26.57%), Postives = 238/557 (42.73%), Query Frame = 1 
Query: 1990 VYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQA---------VSRPHDVQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALAS-VRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXV-DFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAK--GATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPMMKGVKESLRRYA-QTLVKVDSG--VRAVLGM 3612
            +Y+K LL +   L ES  ++   K F++ L + P +P + L+ +  LC +         V     V  GL  +  LI  +P  R  C+   L    HS +D+RTKA+RL AN L+     +  +E FA   L S V  P + +     E                     + E        T    P   M +       PE + +    +SL+FALC K   ++  +   +  A  A K      +P+L RA      E  ++ ++   P G++ L++ +L  L  + T  PS +L+  V+ L + ++                         V  ++P+L  L +  V    P L+       +T    +   +   G   TPAE++V ++       G+ +K++T A S C + + V+   VL +ALN M    P       +PLL MRTVI ++  F  L +FV  + L +LV+ +VW  P++W GFL+C    A ++   SF  ++QLP  +L  AL       VK  L  YA Q  +K        AVLG+
Sbjct:  802 MYEKFLLAVAKCLLESFPAS--DKSFSRLLGEVPVLPDSTLKLLDDLCYSDVIDQHGKDVRDIERVTQGLGAVWSLILGRPHYRQSCLDITLKCAVHSQDDIRTKAIRLVANKLYQLNYISEVIEKFATDMLLSAVEQPLSGIEHSPSESTGQRTVGKFGSQETSVSHFQNLESGNSENDSTTKDQPVSTMSI-------PEVQRL----ISLFFALCTKKPSLIQLVFNTYGCAPKAVKQAFDRHIPVLIRALGSSNSE--LLHIISDPPQGSENLLMLVLQQLTQETT--PSSDLIGTVKHLYETKLK-----------------------DVTILIPMLSSLAKNEVLPIFPRLVALPLEKFQTALAHILQGSAHTGPALTPAEVLVSIHSIVPEKDGLTLKKITDACSACFEQRTVFTQQVLAKALNQMVDQTP-------IPLLFMRTVIQAIDAFPSLVDFVMEI-LSKLVRKQVWRMPKLWVGFLKC----ASQTQPHSFHVLLQLPPPQLDSALNK--YTNVKGPLAAYAGQASIKASLSRPTLAVLGL 1304
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A8H6VUH3_9AGAR (Uncharacterized protein n=2 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6VUH3_9AGAR)

HSP 1 Score: 136 bits (342), Expect = 1.710e-28
Identity = 140/552 (25.36%), Postives = 229/552 (41.49%), Query Frame = 1 
Query: 1993 YDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAVSRPHDVQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAA----NLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAP----PETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELP---ALLQADDA---IVRTGFR---------------RLTHPAKGATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPMMKGVKESLRRY 3561
            YD  L  +++     L+   + + F++ LLD P VP+  L  +  LC   S P  +Q G VTL+ L+  +PA RS  +  +L LT H D   R  A+        N   P+    A V  FA Q L  ++       D +  +                  +                 PP  +V +P+L      P  E      + L FALCVK  + L  +  A+       +  +   +  L R+     G+  ++ +M + P GA++L L +L +    E  +PS +LV  VR L                        S       +++P++G + +  +   LP   ++L  D     +VR+ F                 L    +    TP EL+ LL+D +     + ++    A+ +C     V+   VL   +  +   P        LP+L +RTVI +VT +  L  FV+T +L RL+  K+WT PR+W+GF+ C+K++A      SF A++QLP  +L+E +      G+K  LR Y
Sbjct:  614 YDTWLNQIVSAYQTLLDG--KDRTFSRFLLDLPSVPEDVLGLLRELCVDASSPEKLQVGFVTLRGLVIQRPAMRSEALTILLELTTHPDKKTRGAAINCVKIWVPNASEPNQGIDALVRGFALQMLRKLQLQS----DAQSSKANGVGSGNGQDENMEDGQL-----------------PPEALVQTPYLPERIELPAQEAQVLQHVELLFALCVKVPEFLDEIFSAYGRMDVTVQDAIQKLITALIRSLGPTHGK--LLTIMRSFPPGAESLALRVLTIFT--ENGRPSAQLVALVRALI-----------------------SERDLDARFLIPIIGEMDKSDIIKHLPKIVSILNNDPETKNLVRSVFSSIVTTPPQTFGSVTSNLPRVRQSELLTPQELMALLHDAEK---EIGLQSAKEAIGVCFGMTDVFRSEVLAAVMQQIMDEPV-------LPVLFLRTVIQAVTTYKSLTQFVSTTLLSRLIIKKIWTNPRLWEGFIMCAKVIAP----ASFGALLQLPKDQLRELV--DKQPGLKAGLRDY 1099
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BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: F6GZL6_VITVI (Symplekin_C domain-containing protein n=9 Tax=Vitis TaxID=3603 RepID=F6GZL6_VITVI)

HSP 1 Score: 135 bits (341), Expect = 2.090e-28
Identity = 137/530 (25.85%), Postives = 231/530 (43.58%), Query Frame = 1 
Query: 1990 VYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQA-VSRPHD--------VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETV-------ARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQA-----DDAIVRTGFRRLTHPAKGATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEAL 3516
            VY+K LL ++  L E L ++   K F++ L + P +P +AL+ +  LC + V+  H         V  GL  +  LI  +P  R  C+   L    HS +D+RTKA+RL AN L+     +  ++ +A   L S  +    + D +  +                  V                  P      P       + +       A+  +SL+FALC K   +L  +   +  A  A K  +   +P++  A    + E  ++ ++   P G++ L+  +L +L  ++T  P+  L+  V+ L + ++                    + AT    ++P+L  L R  V    P L+        DA+     +   H   G   TPAE++V ++D      G+ +K++T A S C + + V+   VL +ALN M    P       LPLL MRTVI ++  +  L +FV  + L +LV  +VW  P++W GFL+C      ++   SF  ++QLPA +L+ AL
Sbjct:  532 VYEKFLLAVVKSLLEKLPAS--DKSFSKLLGEVPLLPDSALKLLDDLCSSDVTDQHGKVLRDRERVTQGLGAVWSLILGRPLNRQACLNIALKCAVHSQDDIRTKAIRLVANKLYLLSYISENIQQYATDMLLSAVNQH--ISDPELSQSGSSDQRLEAETGSLETSVSGSQISE-----------PGTSENDPMKGSQSVQNISTVEFHQAQRLISLFFALCTKKPNLLQLVFNIYGRAPKAVKQAIHRHIPIIIGALGPLYPE--LLSIISDPPEGSENLLTQVLKILTEEKT--PTPHLIAIVKHLYETKL--------------------KDAT---ILIPMLSLLSRNEVLPIFPRLIDLPLDKFQDALANI-LQGSAHT--GPALTPAEVLVAIHDISPEKDGIALKKITEACSACFEQRTVFTPQVLAKALNQMVDHTP-------LPLLFMRTVIQAIDAYPTLVDFVMEI-LSKLVSKQVWRMPKLWVGFLKC----VSQTQPHSFRVLLQLPAPQLESAL 1004
[Close]
BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A146HDV6_MYCCL (Uncharacterized protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HDV6_MYCCL)

HSP 1 Score: 135 bits (341), Expect = 2.260e-28
Identity = 137/547 (25.05%), Postives = 231/547 (42.23%), Query Frame = 1 
Query: 1993 YDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAVSRPHDVQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAP----PETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELP---ALLQADDA---IVRTGFRRL-THPAK-------------GATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEALASPMMKGVKESLRRY 3561
            YD  L  ++      L+S  + + F++ LLD P VP+  L+ +  LC   + P  +Q G VTL+ L+  +P+ RS  +  +L LT H D   R  A+      +         V  FA Q L  ++         K+                    +                 PP  +V +P+L      P  E      + L FALCVK  + L  +  A+       +  +   +  L R+     G+  ++ +M + P+GA++L L +L +    E  +PS +LV  ++ L                        S       +++P++G + +  +   LP   ++L  D     +VR+ F  + T P +                 TP EL+ LL+D +     + ++    A+S+C     V+   VL   +  +   P        LP+L +RTVI +VT +  L NFV+T +L RL+  K+WT PR+W+GF+ C+K++A      SF A++QLP  +L+E +      G+K  LR Y
Sbjct:  608 YDTWLSQIVAAYQTLLDS--KDRTFSRFLLDLPSVPEDVLDLLRELCIDANSPEKLQVGFVTLRGLVIQRPSMRSDALTILLELTTHPDKKTRGAAINTVKIWVPNTQPMGDMVRNFALQMLRKLQLQAESTKPTKQNGTGSGEHGEGEDENMEDGQL-----------------PPEDLVQTPYLPERIELPAQEAQVLQHVELLFALCVKVPEFLDEIFSAYGHMDVTVQEAIQQLITALIRSLGPSHGK--LLTIMRSFPAGAESLALRVLTIFT--ENGRPSAQLVALIKGLI-----------------------SERDLDARFLIPIIGEMDKADIIRHLPRIVSILNGDAETKNLVRSVFSSIVTTPPQTFSVTSNLPRIRQSELLTPQELMALLHDAEK---EIGLQAAKEAISVCFSMTDVFRSDVLAAVMQQIMDEPV-------LPVLFLRTVIQAVTTYKSLVNFVSTTLLSRLITKKIWTTPRLWEGFIMCAKVIAP----ASFGALLQLPKDQLRELV--DKQPGLKAGLRDY 1092
[Close]
BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Match: A0A2G5E7X5_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5E7X5_AQUCA)

HSP 1 Score: 135 bits (340), Expect = 3.470e-28
Identity = 132/523 (25.24%), Postives = 235/523 (44.93%), Query Frame = 1 
Query: 1990 VYDKALLTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAV-SRPHD--------VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLWPDPAFTATVEAFAKQALASVRSPETKVVDVKKEEXXXXXXXXXXXXXXXXXXVDFEXXXXXXVETPLPAPPPAMIVASPWLAPPETETVARTRLSLYFALCVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLMGAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVRHCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRTGFRRLTHPAKGATYT-----PAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKVVYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVATVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLKEAL 3516
            +Y+K LL +   L + L S+   K F++ L + P +P++A + +  LC +  S  H+        V  GL  +  LI  +P  R  C+   L    H  +D+RTKA+RL AN L+P    + ++E FA   L SV   + +V D    +                  V                     ++ S       + + A+ ++SL+F+LC K   +L  + + +  A    K  +   +P+L +     + E  ++ ++   P G++ L++ +L +L   E   PS +L+  V+ L + ++   A                        ++P+L  L ++ V   LP   +  D  +      L    +G+ +T     PAE++V ++D +     + +K++T A S C + + V+   VL +ALN + +  P       LPLL MRTVI ++  F  L +FV  + L +LV  ++W  P++W GFL+C    A ++   SF  ++QLP  +L+ AL
Sbjct:  805 IYEKFLLAMAKSLWDKLPSS--DKSFSRFLGEVPLLPESAFKLLEDLCYSDGSEIHERDVRDVDRVTQGLGAVWSLILGRPLDRKACLNIALRCAVHPQDDLRTKAIRLVANKLYPLGYMSESIEQFATDMLLSV--VDEQVSDADPSQVGSMPQRMEGNVGVQETSVSGSQNSEPGASENDSTRGNQQVLQSVTTV---SMSHAQRQMSLFFSLCTKKPSLLQLVFDIYGRAPKIIKQAVHRHIPILLKNLGSSYSE--LLRIISDPPQGSENLLMLVLKILT--EETAPSPQLISTVKSLYETKLKDAA-----------------------ILIPMLSLLSKDEV---LPIFARLVDLPLEKFQAALARILQGSAHTGPALTPAEVLVAIHDINPEKDRIALKKVTDACSACFEQRTVFTQHVLAKALNQLVEQTP-------LPLLFMRTVIQAIDAFPSLVDFVMEI-LSKLVNRQIWKMPKLWVGFLKC----ASQTQPHSFRVLLQLPPPQLEGAL 1278
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1819.4873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRB7_ECTSI0.000e+056.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPU9_9STRA3.780e-5450.22Symplekin tight junction protein C terminal-domain... [more]
A0A6P5GCT6_ANACO7.900e-3326.43uncharacterized protein LOC109722179 isoform X1 n=... [more]
A0A5N5NNM0_9ROSI2.790e-3225.63Uncharacterized protein n=16 Tax=Saliceae TaxID=23... [more]
UPI001FB0A7774.310e-3226.58uncharacterized protein LOC124929488 isoform X1 n=... [more]
A0A2P6PG16_ROSCH3.930e-2926.57Putative symplekin n=3 Tax=Rosoideae TaxID=171638 ... [more]
A0A8H6VUH3_9AGAR1.710e-2825.36Uncharacterized protein n=2 Tax=Mycena kentingensi... [more]
F6GZL6_VITVI2.090e-2825.85Symplekin_C domain-containing protein n=9 Tax=Viti... [more]
A0A146HDV6_MYCCL2.260e-2825.05Uncharacterized protein n=2 Tax=Mycena chlorophos ... [more]
A0A2G5E7X5_AQUCA3.470e-2825.24Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1819contigH-elongata_contig1819:2442..14636 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1035.4
Seed ortholog evalue2.1e-299
Seed eggNOG ortholog2880.D7FRB7
KEGG koko:K06100
KEGG Pathwayko03015,ko04530,map03015,map04530
EggNOG free text desc.mRNA polyadenylation
EggNOG OGsKOG1895@1,KOG1895@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021
Hectar predicted targeting categoryother localisation
Exons15
Model size4251
Cds size3594
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930047.8641815-UTR-H-elongata_contig1819:2441..30411622930047.8641815-UTR-H-elongata_contig1819:2441..3041Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1819 2442..3041 -
1691679260.4841292-UTR-H-elongata_contig1819:2441..30411691679260.4841292-UTR-H-elongata_contig1819:2441..3041Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1819 2442..3041 -
1622930048.148996-UTR-H-elongata_contig1819:14579..146361622930048.148996-UTR-H-elongata_contig1819:14579..14636Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1819 14580..14636 -
1691679260.6425304-UTR-H-elongata_contig1819:14579..146361691679260.6425304-UTR-H-elongata_contig1819:14579..14636Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1819 14580..14636 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930047.8783848-CDS-H-elongata_contig1819:3041..31581622930047.8783848-CDS-H-elongata_contig1819:3041..3158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 3042..3158 -
1691679260.4969318-CDS-H-elongata_contig1819:3041..31581691679260.4969318-CDS-H-elongata_contig1819:3041..3158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 3042..3158 -
1622930047.890826-CDS-H-elongata_contig1819:3933..40771622930047.890826-CDS-H-elongata_contig1819:3933..4077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 3934..4077 -
1691679260.5069945-CDS-H-elongata_contig1819:3933..40771691679260.5069945-CDS-H-elongata_contig1819:3933..4077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 3934..4077 -
1622930047.905548-CDS-H-elongata_contig1819:4615..48011622930047.905548-CDS-H-elongata_contig1819:4615..4801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 4616..4801 -
1691679260.5179827-CDS-H-elongata_contig1819:4615..48011691679260.5179827-CDS-H-elongata_contig1819:4615..4801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 4616..4801 -
1622930047.921908-CDS-H-elongata_contig1819:5373..55441622930047.921908-CDS-H-elongata_contig1819:5373..5544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 5374..5544 -
1691679260.5281587-CDS-H-elongata_contig1819:5373..55441691679260.5281587-CDS-H-elongata_contig1819:5373..5544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 5374..5544 -
1622930047.943984-CDS-H-elongata_contig1819:6183..62711622930047.943984-CDS-H-elongata_contig1819:6183..6271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 6184..6271 -
1691679260.538243-CDS-H-elongata_contig1819:6183..62711691679260.538243-CDS-H-elongata_contig1819:6183..6271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 6184..6271 -
1622930047.9622562-CDS-H-elongata_contig1819:6491..69821622930047.9622562-CDS-H-elongata_contig1819:6491..6982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 6492..6982 -
1691679260.5481398-CDS-H-elongata_contig1819:6491..69821691679260.5481398-CDS-H-elongata_contig1819:6491..6982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 6492..6982 -
1622930047.9785573-CDS-H-elongata_contig1819:7394..74961622930047.9785573-CDS-H-elongata_contig1819:7394..7496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 7395..7496 -
1691679260.557463-CDS-H-elongata_contig1819:7394..74961691679260.557463-CDS-H-elongata_contig1819:7394..7496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 7395..7496 -
1622930047.9918518-CDS-H-elongata_contig1819:8201..83861622930047.9918518-CDS-H-elongata_contig1819:8201..8386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 8202..8386 -
1691679260.5668962-CDS-H-elongata_contig1819:8201..83861691679260.5668962-CDS-H-elongata_contig1819:8201..8386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 8202..8386 -
1622930048.006283-CDS-H-elongata_contig1819:8807..91941622930048.006283-CDS-H-elongata_contig1819:8807..9194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 8808..9194 -
1691679260.5765028-CDS-H-elongata_contig1819:8807..91941691679260.5765028-CDS-H-elongata_contig1819:8807..9194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 8808..9194 -
1622930048.0238352-CDS-H-elongata_contig1819:11015..117181622930048.0238352-CDS-H-elongata_contig1819:11015..11718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 11016..11718 -
1691679260.586152-CDS-H-elongata_contig1819:11015..117181691679260.586152-CDS-H-elongata_contig1819:11015..11718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 11016..11718 -
1622930048.057874-CDS-H-elongata_contig1819:12257..125241622930048.057874-CDS-H-elongata_contig1819:12257..12524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 12258..12524 -
1691679260.596755-CDS-H-elongata_contig1819:12257..125241691679260.596755-CDS-H-elongata_contig1819:12257..12524Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 12258..12524 -
1622930048.075647-CDS-H-elongata_contig1819:12578..130651622930048.075647-CDS-H-elongata_contig1819:12578..13065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 12579..13065 -
1691679260.6058226-CDS-H-elongata_contig1819:12578..130651691679260.6058226-CDS-H-elongata_contig1819:12578..13065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 12579..13065 -
1622930048.092924-CDS-H-elongata_contig1819:13420..135301622930048.092924-CDS-H-elongata_contig1819:13420..13530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 13421..13530 -
1691679260.6146846-CDS-H-elongata_contig1819:13420..135301691679260.6146846-CDS-H-elongata_contig1819:13420..13530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 13421..13530 -
1622930048.1090138-CDS-H-elongata_contig1819:13895..140331622930048.1090138-CDS-H-elongata_contig1819:13895..14033Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 13896..14033 -
1691679260.6235497-CDS-H-elongata_contig1819:13895..140331691679260.6235497-CDS-H-elongata_contig1819:13895..14033Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 13896..14033 -
1622930048.1323454-CDS-H-elongata_contig1819:14561..145791622930048.1323454-CDS-H-elongata_contig1819:14561..14579Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 14562..14579 -
1691679260.63315-CDS-H-elongata_contig1819:14561..145791691679260.63315-CDS-H-elongata_contig1819:14561..14579Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1819 14562..14579 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1819.4873.1prot_H-elongata_contig1819.4873.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1819 3042..14579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1819.4873.1

>prot_H-elongata_contig1819.4873.1 ID=prot_H-elongata_contig1819.4873.1|Name=mRNA_H-elongata_contig1819.4873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1198bp
MVADFQMDFNVGSRKFVASFMREIVRAHPEHVDLVVPVARNLMSDDNANV
KKMAVLLANTVYRPALQRLVDDGSMESARQEWSALEGLSRHKVLSTITDP
AGAADISMVAFKFAETVVLACVGGRGLGPGASREDRSVHRDLSPTHPFLL
ADTLDQAGHALARQMVGWLGTSSSGGGAGSTSAVGTTSAVKGATWGSGFR
AQHYAALINALQSLATNRAALFPDIVPGLASALESVTAGRTTNPVTVTAP
GGAVPEGLRDAASSLRSACLKLLKLAPGVSKGVQRLAAAAALAGSDGEAK
AAVSGNSALRGRVILPARPRERTTETPPKTSPKTPSPQGRERLALADLAA
SACRRKVPKPPPGYKHKRTPGFPLADLELLLGHVLNALGPDLATAKGDVA
SPQHAEGKAPVNNKRPRSSRNCSGSQSNSSESRVEGGTKKRRSGDQHQNT
GTGAVMNSNGQKEASGNGRSPIDELGERRSRQAGAASKVSPGDASEAEAE
AEAQPSAEAEQEKKPEAADLTEAKRAFSRVLCVWEGAATEGKRGLHQRVI
ARLGRMLAQAEVEAETKATGMDVQPAIDFFTEDYKRRYHAALTLLMDFYA
ADVVAATARVANSSSSKNGVETSEKNKDPAGDESGRAKRGQGFEVYDKAL
LTLLTRLSESLESTWRQKLFTQTLLDCPRVPQAALEAVCGLCQAVSRPHD
VQTGLVTLKDLIFHKPATRSVCVPSVLHLTHHSDNDVRTKAVRLAANLLW
PDPAFTATVEAFAKQALASVRSPETKVVDVKKEEEKEEKTPPQEQEAQEQ
DVVDFEDDEEDEVETPLPAPPPAMIVASPWLAPPETETVARTRLSLYFAL
CVKSRQMLAGLLEAHVTAASAAKAGLIAELPLLARAAAKGFGEQGVVGLM
GAAPSGAKTLVLAMLDLLVPKETNKPSQELVVAVRRLRQARVAALAETVR
HCFDCYNILYRSRHATGVEYMVPVLGGLGREGVALELPALLQADDAIVRT
GFRRLTHPAKGATYTPAELVVLLNDFDHVAAGVPMKRLTSALSLCLDNKV
VYNYAVLREALNVMSQVPPPGASAKQLPLLLMRTVIMSVTKFADLKNFVA
TVVLVRLVQHKVWTQPRIWDGFLRCSKMMAKESGATSFIAMVQLPAARLK
EALASPMMKGVKESLRRYAQTLVKVDSGVRAVLGMEVGGAESVSKKI*
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mRNA from alignment at H-elongata_contig1819:2442..14636-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1819.4873.1 ID=mRNA_H-elongata_contig1819.4873.1|Name=mRNA_H-elongata_contig1819.4873.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=12195bp|location=Sequence derived from alignment at H-elongata_contig1819:2442..14636- (Himanthalia elongata Himel1 dioecious)
CAGGTGAAAGAAATTTGCCTGAATCGCGACACTTCTCTTTTGCCCGAGGT
TATTCCTATGGTCGCCGACTTTCAGGTACGAAATTGTGATGTATCTTGTA
CTGACTGACGTTTGCGTCGTCTTGAACCAACTTCGGAAAGTATCTTATCG
ATTGATTCTGCTGGACATAACTTGTATTAATAGTAGGTTAGGATAGGAGA
TGATATGAAAAACATGGAAACTCTGGAGCTAAATCTACCTGGGACACGTG
GGTTTTTACGCTTTTGTGTTCTATTATTAGACTAAACTATCAATATACGA
AACTTTCGGGGCCACATGTGACATATTGATATTTTATCATCTTCTCTTCT
CTTCTCTTCTCTTCTCTTCGATGCTTCAGATGCCACGGCGTACGCTTTGG
TTCGCCATTCGGCACAGCGTGCACCCAACCACCAGCAACCATCCGCCATC
CCATCCCTCCCCTTTCACTTGTACACGTTAAGACACGTAAAACACATTGG
ACACGCCTGAGCCGTTTGAGGCAAGTTGAGGTAGGGAACTGATCGCGTCG
CGTCCTTCACTTCCACCCTCGATGGTCTTCCCGAACCCTTACATATTTTG
AAGATGGATTTCAACGTCGGCTCCCGAAAGTTCGTGGCATCGTTCATGCG
AGAAATTGTGCGAGCTCATCCGGAGCACGTGGATCTTGTGGTCCCAGTGG
CTCGTAACCTAATGAGCGACGACAACGCAAACGTCAAGAAGGTAAACACT
GAACGCTCTCCGTTAGAGACCCTCGAGCAAGCGCGCTCTGCGAATCTTTT
CAATATGGGGAGCTGCCATCGATCCCTCATCGCTTTTCAAGACAGATCGT
TCAAGCAGGCTGCCGTAATTTTGGTGCTAACGCATTACCGATAGTTGGTA
AGCTACTTTGTGTGGGAGGCATTATCGGGATATCGTATCGCAGGTTTTCT
TGAATCGAAATAATGCAATCATGAGAGCATGTCCCGAGAGTGCTTGGCGT
GCGGCGAGACGTGGAGTACAGTACTCAAGAGTTGTCAGACGTTACTTTCC
CCTCACCCTTCGGTTGTTACCCTTCGGTTCTTCGGTTCTGTTGTCTCGGC
GTCAAGATGGCTGTTCTTCTGGCCAACACCGTCTACAGACCAGCCCTGCA
ACGACTGGTGGATGACGGGAGCATGGAAAGCGCTCGACAAGAATGGTCGG
CCTTGGAAGGACTCAGGTGGATAAGGCCTCCGAAAATCGTTACTGTTGTG
ATTTGAACAGCTGGGCTCACAACACAAAGCACCAGTAAGTCTAGGACGGG
CGTAGCTAACACCACAAGACATCCTCGCCAAGGGCAACACGCGAACATCA
TCGTCTTGTTTCAGTTCGGACTGGCTGACTGCTGACCCTTGCTGTTCCTT
GGCGATGTACCACCCTCGGGCGAGAGCGTCGCCACCAAGTACCTACGTTT
TCGCTAGGGTGTAACACACACACACACACACACCGTCACCACGCTTTGCC
CCACGTAACCCCGCAACCATCATGACCACTCGTCCGCTGCCCCCCATCCC
TCCCTTATCCCGCGATATGAGCAGACACAAAGTGCTAAGCACCATCACGG
ACCCCGCCGGGGCAGCCGACATTTCTATGGTGGCATTCAAGTTCGCTGAG
ACCGTGGTTCTAGCCTGCGTCGGCGGGCGCGGCCTTGGTCCGGGAGCCTC
CCGCGAGGACAGATCCGTGCATCGCGACCTCAGCCCGACCCACCCATTTC
TGCTGGCGGACACTCTCGATCAAGCCGGCCACGCGCTGGCGCGGCAGATG
GTGGGGTGGCTGGGGACTAGCAGCAGCGGAGGCGGGGCCGGTAGTACTAG
TGCTGTTGGTACTACCAGTGCTGTCAAAGGCGCCACATGGGGCTCGGGGT
TTCGTGCTCAGCACTATGCGGCGCTGATCAACGCTCTTCAGAGCCTCGCC
ACGAACCGCGCAGCGCTCTTCCCGGATATCGTGCCTGGCCTCGCGTCCGC
GCTTGAGAGCGTCACCGCGGGAAGGACGACTAATCCCGTCACCGTCACCG
CCCCTGGGGTTGGGGGGAAGAAACACAAGAATGATATCGCGACATTACCA
GCGGGGACGGAGGGTGCTGTCCCCGAGGGGCTGCGAGACGCGGCAAGCTC
TCTTCGAAGCGCTTGTCTGAAGCTGCTCAAGCTTGCCCCGGGGGTGAGCA
AGGGCGTGCAACGGCTCGCTGCGGCCGCGGCTCTAGCTGGGTCGGATGGC
GAGGCGAAGGCAGCTGTTAGTGGGAATTCAGCGCTGAGAGGACGCGTGAT
CTTGCCCGCTCGTCCGAGGGAGCGAACGACAGAAACACCACCAAAGACAT
CGCCAAAAACACCAAGCCCGCAAGGTAGGGTAGGGTAGGGTAGGCGTATG
ATGATGTGCACATTTTTTTTTTTTTACGGTGTGCCCTTCGAAAGAAAATA
CTCTTTGTTCTGCAAAACAAGTGGCAAAGCTGAGTATTGCACACCAAAGT
GAAACCGAGCTGCTGAGCAACACAGCTGCATGACTTGCAATTGCCGCAAT
AACCGGCCTTTGTTACATGGCATGTGATCCACCCTCATGCGGTGAACATG
GAGTTGTGGCCTAGAGACGCACCGCCAAGCCGTGATATACCTATGCAAGA
AGGGACAAAATAATGAGACAAGTGAGAAGAGATGTTTTATGTTTTATGTT
TTCCTTTGACGGTGTTGATGGTGTTTTAATTTGACGATCTTAACGGTGTG
TTCAAATGTCATACTCCCTTAGAGCGCAAGCCACTTCCACAATCTCTATA
TCTACATTATTTTATCTATCTTGCTCTTAACCTATGTTTCCGTGTCTCCG
CATAACCGTTTCATGTTTTCGCGTGAATCCCAGCTCGAACCGTCCACATC
CTGGCTCGCACATCGGAGGAACGGCTCGCGCTGGCGGATCTGGCGGCGTC
GGCCTGTAGAAGGAAGGTGCCCAAGCCACCCCCGGGGTACAAACACAAAC
GCACCCCGGGCTTCCCCCTGGCAGACCTGGAACTCCTCTTAGGGCATGTG
CTGAACGCTCTCGGGCCGGATCTGGCGACGGCCAAGGGTGATGTGGCGTC
TCCGCAGCACGCAGAAGGGAAGGCGCCAGTGAACAATAAGAGGCCACGGA
GTTCGCGAAATTGTAGTGGTAGTCAAAGCAATAGTAGTGAAAGTAGGGTA
GAGGGCGGGACCAAGAAGAGAAGGTCCGGAGACCAGCACCAAAATACCGG
TACCGGTGCAGTCATGAACAGCAACGGGCAGAAAGAAGCCTCGGGAAACG
GACGGTCTCCGATAGACGAACTGGGAGAACGAAGGTCGAGACAAGCGGGC
GCCGCCTCGAAGGTAAGCCCGGGGGATGCGTCGGAAGCGGAAGCGGAGGC
AGAGGCGCAACCCTCGGCGGAGGCGGAGCAAGAGAAAAAGCCGGAGGCGG
CGGACCTAACGGAGGCAAAGAGAGCGTTCTCTCGAGTGCTGTGTGTGTGG
GAAGGAGCGGCGACGGAGGGGAAACGTGGGCTCCACCAGAGGGTCATCGC
AAGACTGGGTAGGATGTTGGCGCAAGCGGAGGTGGAAGCAGAGACAAAGG
CGACCGGAATGGACGTGCAGCGTGACGAGGAGGCTCCTGAGTCCCAGGTG
ACCGCGAGGAGGTGTTCGAGTCGTTCGCGAGCCTTGTGCGTACAAAGCTG
TCCTGCTCTGGAGCAATTCTACACTTAAAAACAATTAAACACCATTAGCT
CTACATGCTGGACCGACCAAGAAACGCCTGATACGGTAATTTGGGATGTG
CGGCTGAGTTAATCGAATATTTCGTCATTAAATCACGTGATTTGGAGCAC
ACTTACAGAGATACTCAACGAACGACCACGTTGGGGGGGGGATTCTTCTT
TGAGTTATACCCAAATCAAGTGCCCCTACAATACCCATTAATTTTTAATT
GGCCATAGCTCGGCGAAAAAAAAATGGACGGGGTCCTTCTTTGACTGTTT
CGGCAAATGTGCTCCGAATCAGATGTCAACATTTCAGGACAAACATAGAG
AAACTCGGTCGCGCATCGCGGTATTCGCACCAAGATCGATGTACACTCAA
ACTTATGTACAATTAAGGAATTCAGCCATAACTTTCGAACGGTAATAAAC
TAGGGGAAAAGACACCCACCGTTCGTTTTCTCGCCTCTCTACCCTATAAA
TGAATTTGAGCGAAATCAGCGGACTTCAATTTTGTGTGAAAAAATCCAAA
ACTTCAGATTGAGCCACACAAAAGCACGTTACGAAAAAAATCTCAAAAAC
TGAAATGCGGCTTTTACGACACCCACTTGGCGGATTTCCAAGCTAAAGGC
ATGTGCGTGAGCGCCTTGACTACCCGATCACGAGGATACGGCCAACTTGC
CCTGATTCGTTGTAGCTTAAAATATATGATCAACGGATATTTTTATGTGT
TTCTTGGTCGGTAGGGTGGATATGGGTGAATGGCTCTCGAGTAGCGGTAC
ACTGTGGTTTCCCGGCGTACCGTGCTGTGTGGACCTTCAACTGGGCTATT
TTCCAGTGTTCGTCTTTTCGCAGTAGATGCGAGGCAAGGCATAGAACTAC
CGGACTGCGCACGATTGGTGTGTATATGTGTTGTCATTCCATTTATTCTG
GACGCCATACATTCACCATGTACATTCACCATTCACCATGTACATTCACC
ATGTACATTCACCATTCACCATTCACCATTCACCATTCACCATGTGGACG
CACCAGCCGGGGTAGGGTAGGGTAGGGTAGGGTAGGGTCATACAGGAAGA
TCACGCTCGATTTCTCCACCTTCCTTTTGCGGTGCTTGCCTTAATTTTTA
TTTATTTTAAAGACATGAAATCATCCCAACCCTCCGAACATACACACCTT
CTTAGCACCGTGAGACGCGTAATCCAAGGGACTATCGCAAGAACGATTTA
GCCATCCCTTTCCCTCATCGATCGTGACGTCACAGTATACTGTATATAGT
ATGTCGAATTTTGTGTACCCGCGAAATAATCGTTCTTCACTTGTTGGGCA
TGATGTCAGAAAAAATACCAGTTCGTAAGACTGCGTCGAGGTTCAAACTC
TCGCCCCAACGTCAGAAGGTTTCGAGGTTACCAACTGAGCCACCGGGGCG
ACCTATGTGTTATATACCTATTTTTTTTAACTGTCCATTATACTATACTA
TACATTAACCCTTGAGGAAAAGGCGGTGTCGCAGTATTAGCCAGATATTT
CCGAGCGTTGCGTTACCCGACTTGTCACAAAATTCATTTTGGCGTTCAGT
GTTCAGTGCCACCGGGAACGCTTTAGCCTTAGAGCTTCCGCGATGCACAT
ATGTCGATGCCAAGCTCGATCCGATCGAATTCAACTCAACTGAACCCGAC
CTATCCCTCGTTTGGTTTCGTTTGACTAGGCGGTCCTTGAAGCGGCGATA
GACTTCTTTACGGAGGACTACAAAAGGCGGTATCATGCGGCGCTCACCCT
GCTTATGGATTTCTACGCCGCGGACGTGGTCGCAGCCACAGCCAGAGTCG
CTAATAGCAGCAGCAGTAAAAACGGCGTCGAAACGAGTGAGAAAAATAAA
GATCCGGCGGGGGACGAGTCCGGGCGAGCCAAGAGAGGGCAAGGGTTCGA
GGTATACGACAAGGCACTACTGACCCTGCTGACTAGATTGTCCGAGTCGC
TGGAGTCAACGTGGCGGCAGAAGCTGTTCACGCAGACGTTGCTCGATTGT
CCCCGCGTGCCGCAGGCGGCCCTGGAGGCGGTGTGCGGTCTATGTCAAGC
GGTCTCCAGGCCGCACGACGTGCAGACTGGTGAGTTTGAGGAAGGGAAGT
GGGCAGGCGGCGACGAGAGAATCGGTATGTTAACGCGGGGGCGCGACAGT
TGTGGGTACGGTAGTTCTGGGATACTAGTTACAGTTTTGGACGGGAGGAG
ACGGATATGACGCGAGCATCTTGTGCGCTGCGGTGCCTCTTTACTAGTCA
TTAGAAAGAGGCCTCCATCATGGCAATGTCCACTCGATTCGTTCAAGAGC
GTGAAGGGCGTGCGGGTTTCAACTGTTCCACCTGCTGAAAACGCGCAGCA
AGATCGGTAGTAAGTGGAAGTAGCTGACCGCTTGCCGCGGTCGCATTCGC
ATTCGCACTCTACCGTGTTGCCCTTTATTAATAGTATATATTACAATGTG
CCGCATTTGGTTTGAATATTATATAACTACAATATGTGAATGCGTGCTAG
GTCTGGTTACGCTAAAGGACTTGATATTCCACAAGCCAGCAACAAGGAGC
GTGTGCGTGCCCAGCGTTCTTCATCTGACCCACCATTCGGACAATGACGT
CAGAACCAAAGCCGTTCGCCTGGCCGCCAATCTACTATGGCCGGATCCGG
CGTTCACGGCTACTGTAGAGGCGTTCGCGAAGCAGGTGTGGACGTAGTAA
AAATTTGCTTCGATTTATGATCTGATTACACCGCACAGTATCCAGACGAG
GCCCACCCACACCTGAGGTTGCCGTGGCCTAGCTAGAGATGGCATACAGC
AGTTTATCGTAGCAGCCGTTTCTCTCCCACCGTTCGTACCGTCTCACTTC
GTCTCCGCACTTTTCCCGGATAAAACTAATGAAAGCTATCAATATTAATG
ATGCACGTGTACCATCGTCATGGAGACTGCTGTGGATCACAGGCCGCAGG
TCCCAAGGCGTTGATTTGTGTTGCTCTAAGATGCGATGTGTCGTGGCATT
GCCGTGCTAGTGTGTAGTTTGACGTTTGTGCTGTCTGGTGCGGTGAAGCG
ACAAGGCGGCATCATCGCGTTTGACGTTCTATAAAGTACGAAGTAATGTA
GAAGCGGGTTCTTTTTATAGCTCATGACTGGTAGCATTTTGTGGCACGGA
ACGTTCGCCCGCTAGGCTGCAAGCCCCCCTCGGCAGGAAGGAGTATAGTG
ACCACTTTACTCGGCGCTTTGTTTGGGCCGTAAGTAACGGTTATTATGAA
TAGCTTTTAGGGGCGGGTATTGTGTGATATCAATGCACCACCGTTAATGG
CCAGACGCTACACACGCCCTGGCGGGTGTCCCCATGTTTTTGCCTCTCTG
CTGTGCTTTTTTGGCTGTTCTGAATCATGTCCGTGCGTAGGCGCTGGCGA
GCGTTCGTTCTCCGGAGACCAAGGTGGTAGATGTGAAAAAGGAGGAGGAG
AAAGAAGAAAAGACGCCACCACAAGAACAAGAAGCACAAGAGGTTGGTGA
CCTCCGTACTGTGGTACTGGGCCTACGGCAGCCCAGCTGTATCGTAATTT
GTTCTAGTTCTAAATTCAGTGACGTGTTTTGTCGCCCCCTCGGATATGAG
CACCTGAGTTAGCCGTTAATATTTGCCTCTGGCCGGGGTGCTTTGGCACG
CAACGGTATGACCACAGCCGCGGTTGACAGTTCATGAGGTGAAGTGAGTT
GAGATGTGGCAGAAGGCACCACCGAAACGAGCGTCGAGTCGATGCAAAAG
AGAACAGGGAACATAAGAAATTCCCCTAGACTTCGCCTGAAACGTACCTT
ACCCATTTCGAGTTTTCGAGTGGCCTCGACGCCTAAGTCATCTCTTCCTA
CCTTACCCAATCCTCGGTACCTTGTGTTGCGGTAAATTGTATGGTACGGC
ACAGCAAGATGTGGTGGACTTTGAGGACGACGAGGAGGATGAAGTTGAGA
CACCGCTCCCCGCGCCGCCTCCGGCGATGATCGTGGCCAGTCCGTGGCTG
GCGCCGCCGGAAACGGAAACCGTTGCGAGGACTCGGTTGTCCCTTTACTT
CGCCCTCTGCGTAAAGTCGCGTCAGATGCTTGCCGGACTGTTAGAAGCCC
ACGTCACGGCCGCCTCCGCCGCTAAAGCGGGGTTAATAGCGGAGCTACCG
TTGCTCGCGAGAGCGGCGGCGAAAGGATTCGGGGAGCAGGGGGTTGTTGG
ACTGATGGGGGCGGCACCCTCTGGAGCTAAGACGTTGGTGTTAGCGATGC
TGGATCTGCTGGTGCCAAAGGAGACGAACAAGCCGTCACAGGAACTGGTT
GTCGCCGTGCGACGACTGAGACAAGCTCGCGTAGCTGCCTTAGCGGAGAC
GGTAAGGCACTGTTTTGACTGTTATAACATACTCTACCGCTCTCGGTGTC
TACGCTGTGTCGCAGAATTGTTTAAGTGCATTGTGCGTTTAAGGCGAAGT
GCCGGATCGGCAAATTAACCATACGACGTACCGTATATGATGCTCCTGTG
AAAGGCAAATATCTCAAGTAAGGCAAGCCCAAGTCGCTATCTGTGCGTTT
TACCTTGGTTTCTTCTGACTTGGTGTCGCCTCCCTTCGGCTGGGCCAGGT
GGGGGGATCCAATAGGCACGCTACTGGGGTCGAGTACATGGTGCCCGTCC
TGGGTGGATTAGGGCGCGAAGGCGTGGCGTTGGAACTGCCCGCCTTGTTG
CAGGTAAAGAGAGAGGCACGCGAAGCACCCGCGTTTTTCGGGGGGGGGGG
GGGGGGGGGGCCAGGTTTTGGGTTGTTTTTTATTTCTTTGCCTTGTGGTG
GGGAAGGGGGGCGGGGNNNNNNNNNNGTTGTGCTGCTCCCTCCGATTTGG
GGTGGATGTAGGGGGGGGGCCCGGGGCGCCGTTTTTTTTGTGGGGGGGGG
GGGGGGGGGGTTCGCCATGTTGTCGATTCGTTCTCATATCCTTGACTCTC
CTCACTACTGCTCTTTCTCCCGAGGCTGCAATTCTCTGGAGCACCAATCC
GGCGTGTTGGCTATGTTTGGAGACATTCGCTACTGTACTGTACTGTACTG
TACCATCGTAAACCTGATGATGGTGATGATGATGGTGCTGGTGCTGGGTA
CATGATGACGGGATGCGTATGCTGGTGCTGGGTACATGATGACGGGATGC
GTATGCTGGGTACATGATGACATGATACGAAAGCTCAAGAAATAATAATC
TGACCGCAATGGATTGAGTTAGGTTGTGTCCAGTAAAACGCCAAGCTTTA
ATGCAAGGTGTCGTATTCTCTCGTGACCTTCCGTGTCCGCTATCTTTTTG
TTGCTATCTATTTCATACCATGGGCCTGGTTCTTTTTATCAGGCTGATGA
CGCTATAGTGAGGACGGGCTTCCGGCGGCTTACGCATCCCGCGAAGGGGG
CCACATACACTCCGGCGGAGCTTGTGGTACTCCTGAACGACTTCGATCAT
GTGGCGGCGGGAGTGCCCATGAAGCGCCTCACGAGTGCCCTGTCTTTGTG
TCTTGACAACAAGGTGTGTTTTCGAGTATGCAGAGAAATTGTTGGCAGCT
TTCCGTGCGTTATTTGTTATTTTACCTTTTTGACTTCTTCGAGCAGGCAT
TCATGGGTACTAATAATAGTAGTAACGTTCTTCGGTGCGATCTACTGTAT
GATATGTCGCCAAGAGTTGACACTTCGGAACCAGTGCGGCTTAGGCGGGT
GGACCTAAAAAGTTTTGGAAACAACTCGCTTCTTCGTTGTTGATGTGTTG
AAAAATTAAATAAAACCGATACCTTTCGTAGGTGTTCGTTTATTAAGGCT
CGAACAAAATTGGAACACGGGGTCCAATCCCGGGGCCGAACCCCTTGCCA
CGGATAGTCCCTAAGCTGCCCCCTTTTTTCCAGATTCGAACCCGCGTCCA
ATCTTGTTCGTTTATGAATGGTCTAGAGGTCAAGCCTTAATAAACAAACA
ATAGGGACCTTACTGCTTCACTTTTTCGACAAATTACTGGGCGGCACAGA
AGCAAGCAAAGCCCGGTGATTTTTCCGACGCACTCTCTTTGCCAGCTGAC
TTTTGATTTCTGGACGGGATCCAACCGTCCTCCAGGTGGTATACAACTAC
GCCGTCCTGCGCGAAGCGCTCAACGTTATGTCTCAGGTTCCACCGCCTGG
CGCAAGCGCGAAACAGCTCCCTCTGCTCCTAATGCGCACGGTCATCATGT
CCGTCACGAAGTTCGCCGATCTAAAGAACTTCGTCGCCACCGTGGTGCTG
GTTCGATTGGTACAGCACAAGGTTCGGTTTAGTTTGGTTTGGAGCAATAG
TTTATAACAAGGAAGACACAGTATCATCAGTTAGCGCTTATTGCGGCTTC
GCTGGTTCTTTTGTCTGGTATGGCTGAATTGCGTGAGGCTCGCGGTTGTT
TTGATAACCCCACTATTATAGACCCGAAAAAATCACCAACCAAATGGCGC
ATAGTAGAGCCCGTCCAGGTGGTATGTGTCTCCGTCTGTGTGTGTGCGCG
AACGCGCGTGTTCATCTACCTCTATACTTGTATACTATGGGAGGTGTTTT
TCCCCCATATCTTGTGGATTGACTCAAATGACCCCTCCGCGAGGCATTAC
CCCTCTCTCCTGCATGGTCCCTCTCGGAACCTATCTGATCATACTAGAGT
CACTGAAAGATCCTCATGGTCCTGGACACTAAACTGTATCAATAATAGCG
TACACTCTTCGGTTGCTGGGAATGAGCTTATTAAAGTAATGTAATTATTA
TCTGGAATAATGGAATAATGGACTAACGATGTACTGTTCCCGTGGTGGTG
GCGGTGAAGGTCTGGACGCAGCCGCGAATTTGGGACGGATTTTTGCGGTG
CTCCAAAATGATGGCCAAGGAGTCGGGGGCGACATCCTTCATTGCCATGG
TGCAGCTGCCCGCAGCCAGGTTGAAGGAGGCGCTCGCCAGCCCCATGATG
AAGGTGCCATGCCATGTCATGTGCCGACAGAGAGAGTCCACCGGCGCCCC
TCGTGCCTGTACTGTTGAGAAGGAAGATTCACATACTAACACGCTTCCAT
ATTTTTTTCAGCTTTGTCCTATGTCGCAACTGTTCAACTGTTCAACTCGA
CTCGAAGAGCACGAATGGTGGGTGTCCATTCTCCATGACTACTGAAGCTA
GTCTTGGGACCAATTTTAGTGTGGAGAATTCGCGACCATTGGTTCTCTTA
ATTATGCGCCGACAAGAAACCTCGGTCGAAGCACATCCTCAGTACCGGAG
GACATTTTTGTTGACTGACCGAGTGTGATTTTTCCCACCAAAGAAAATAC
TTTTTGGCCTTTTACCGCACCACTGCTCCACTGTCGTACCTTTTGCGTGG
GGGGGGTAAGTCTGGCATGCTTGCTGAGTCAAGTGTGTGACTTGCGCTAT
TAACAGTATACCCGGCAGTTTTCGTGTGCTGGTGATGTCAAACAAGGCGA
AATCGTTTGAGGCTGGGTATGTCTCGAGCGCCTAACGAGCACCCCAGATC
TTTACTCCTTGAATTTTCGCTTTTGTAGTAATGTAGTAATATAATAGTAT
CACAGTAATATCCTAAAGTAATACATGTAAATACAGGAAGTAATGTAGTA
AAGTCATACAGCAATATAGTATAATACAGCAGTGTAGTATTGTAGAACAG
TAATGTAATAATTAGTATCCAAAAAATAATTCGAATCCTTTCCTGATATG
CTCCGGTACGTGTCCGCTTCATTTACAGGGAGTAAAGGAATCCTTGCGGC
GGTATGCGCAGACGCTGGTTAAAGTTGATTCAGGGGTCAGAGCTGTGCTG
GGAATGGAGGTCGGTGGCGCAGAATCAGTCTCGAAGAAAATCTAGGACTC
CACCATGAGGGACTCTCTGCGCTGCTGTATATGCCAAGATACCTCGATAA
AAAAGCGAACTAGGAGCTGCGAAGATGGATGGAAGCTGCAACAATCTAGT
GCCTGGTAGAGGAAAGCAGAGGATATCTGTGCGGTTTCATGCTTGTGTTT
GGGCCGAATTGTGTGGTTGTCGCCCGTCCATATTAGACGTGGTGATTCCA
CCTTCCTATTTTACGTCTTGATGTGGTGACCAGACATATCCGACATGCTC
CAGCATAAACCTGTATGCATTATTCACGCAATAGAGACCGGTTTGACCCT
GTAAGGAGGCGTCAGTGCCGGTGTGTCCCCTAGCCCCCCCTTGCGGAGGG
TTCCCCTTGGAGGTTGTGGACTGATCGATTGCGCGCACGTTCGCTACAAG
CTTGTTACGAGGTGCTGCAGAACCTCTATACAGTACTACATATTTTTGTT
TGGCGCCGATGAAATGAAAGCCTAGTATTTACTTTTTATCGACTGGTAAG
TGTGGTCGGCCGGGTTTCGAGAATGATCCCCGGCACAAAGAGTACCCTCG
TGCTGTCATTATCAGTGTCGCACCGGGGTCCAAAATGACACTTCC
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Coding sequence (CDS) from alignment at H-elongata_contig1819:2442..14636-

>mRNA_H-elongata_contig1819.4873.1 ID=mRNA_H-elongata_contig1819.4873.1|Name=mRNA_H-elongata_contig1819.4873.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7188bp|location=Sequence derived from alignment at H-elongata_contig1819:2442..14636- (Himanthalia elongata Himel1 dioecious)
ATGGTCGCCGACTTTCAGATGGTCGCCGACTTTCAGATGGATTTCAACGT
CGGCTCCCGAAAGTTCGTGGCATCGTTCATGCGAGAAATTGTGCGAGCTC
ATCCGGAGCACGTGGATCTTGTGGTCCCAGTGGCTCGTAACCTAATGAGC
GACGACAACGCAAACGTCAAGAAGATGGATTTCAACGTCGGCTCCCGAAA
GTTCGTGGCATCGTTCATGCGAGAAATTGTGCGAGCTCATCCGGAGCACG
TGGATCTTGTGGTCCCAGTGGCTCGTAACCTAATGAGCGACGACAACGCA
AACGTCAAGAAGATGGCTGTTCTTCTGGCCAACACCGTCTACAGACCAGC
CCTGCAACGACTGGTGGATGACGGGAGCATGGAAAGCGCTCGACAAGAAT
GGTCGGCCTTGGAAGGACTCAGATGGCTGTTCTTCTGGCCAACACCGTCT
ACAGACCAGCCCTGCAACGACTGGTGGATGACGGGAGCATGGAAAGCGCT
CGACAAGAATGGTCGGCCTTGGAAGGACTCAGCAGACACAAAGTGCTAAG
CACCATCACGGACCCCGCCGGGGCAGCCGACATTTCTATGGTGGCATTCA
AGTTCGCTGAGACCGTGGTTCTAGCCTGCGTCGGCGGGCGCGGCCTTGGT
CCGGGAGCCTCCCGCGAGGACAGATCCGTGCATCGCGACCTCAGCCCGAC
CCACCCATTTCTGCTGGCGGACACTCTCGATCAAGCCGGCCACGCGCTGG
CGCGGCAGATGGTGGGGTGGCTGGGGACTAGCAGCAGCGGAGGCGGGGCC
GGTAGTACTAGTGCTGTTGGTACTACCAGTGCTGTCAAAGGCGCCACATG
GGGCTCGGGGTTTCGTGCTCAGCACTATGCGGCGCTGATCAACGCTCTTC
AGAGCCTCGCCACGAACCGCGCAGCGCTCTTCCCGGATATCGTGCCTGGC
CTCGCGTCCGCGCTTGAGAGCGTCACCGCGGGAAGGACGACTAATCCCGT
CACCGTCACCGCCCCTGGGCAGACACAAAGTGCTAAGCACCATCACGGAC
CCCGCCGGGGCAGCCGACATTTCTATGGTGGCATTCAAGTTCGCTGAGAC
CGTGGTTCTAGCCTGCGTCGGCGGGCGCGGCCTTGGTCCGGGAGCCTCCC
GCGAGGACAGATCCGTGCATCGCGACCTCAGCCCGACCCACCCATTTCTG
CTGGCGGACACTCTCGATCAAGCCGGCCACGCGCTGGCGCGGCAGATGGT
GGGGTGGCTGGGGACTAGCAGCAGCGGAGGCGGGGCCGGTAGTACTAGTG
CTGTTGGTACTACCAGTGCTGTCAAAGGCGCCACATGGGGCTCGGGGTTT
CGTGCTCAGCACTATGCGGCGCTGATCAACGCTCTTCAGAGCCTCGCCAC
GAACCGCGCAGCGCTCTTCCCGGATATCGTGCCTGGCCTCGCGTCCGCGC
TTGAGAGCGTCACCGCGGGAAGGACGACTAATCCCGTCACCGTCACCGCC
CCTGGGGGTGCTGTCCCCGAGGGGCTGCGAGACGCGGCAAGCTCTCTTCG
AAGCGCTTGTCTGAAGCTGCTCAAGCTTGCCCCGGGGGTGAGCAAGGGCG
TGCAACGGCTCGCTGCGGCCGCGGCTCTAGCTGGGTCGGATGGCGAGGCG
AAGGCAGCTGTTAGTGGGAATTCAGCGCTGAGAGGACGCGTGATCTTGCC
CGCTCGTCCGAGGGAGCGAACGACAGAAACACCACCAAAGACATCGCCAA
AAACACCAAGCCCGCAAGGTAGGGGTGCTGTCCCCGAGGGGCTGCGAGAC
GCGGCAAGCTCTCTTCGAAGCGCTTGTCTGAAGCTGCTCAAGCTTGCCCC
GGGGGTGAGCAAGGGCGTGCAACGGCTCGCTGCGGCCGCGGCTCTAGCTG
GGTCGGATGGCGAGGCGAAGGCAGCTGTTAGTGGGAATTCAGCGCTGAGA
GGACGCGTGATCTTGCCCGCTCGTCCGAGGGAGCGAACGACAGAAACACC
ACCAAAGACATCGCCAAAAACACCAAGCCCGCAAGGTAGGGAACGGCTCG
CGCTGGCGGATCTGGCGGCGTCGGCCTGTAGAAGGAAGGTGCCCAAGCCA
CCCCCGGGGTACAAACACAAACGCACCCCGGGCTTCCCCCTGGCAGACCT
GGAACTCCTCTTAGGGCATGTGCTGAACGCTCTCGGGCCGGATCTGGCGA
CGGCCAAGGGTGATGTGGCGTCTCCGCAGCACGCAGAAGGGAAGGCGCCA
GTGAACAATAAGAGGCCACGGAGTTCGCGAAATTGTAGTGGTAGTCAAAG
CAATAGTAGTGAAAGTAGGGTAGAGGGCGGGACCAAGAAGAGAAGGTCCG
GAGACCAGCACCAAAATACCGGTACCGGTGCAGTCATGAACAGCAACGGG
CAGAAAGAAGCCTCGGGAAACGGACGGTCTCCGATAGACGAACTGGGAGA
ACGAAGGTCGAGACAAGCGGGCGCCGCCTCGAAGGTAAGCCCGGGGGATG
CGTCGGAAGCGGAAGCGGAGGCAGAGGCGCAACCCTCGGCGGAGGCGGAG
CAAGAGAAAAAGCCGGAGGCGGCGGACCTAACGGAGGCAAAGAGAGCGTT
CTCTCGAGTGCTGTGTGTGTGGGAAGGAGCGGCGACGGAGGGGAAACGTG
GGCTCCACCAGAGGGTCATCGCAAGACTGGGTAGGATGTTGGCGCAAGCG
GAGGTGGAAGCAGAGACAAAGGCGACCGGAATGGACGTGCAGCGAACGGC
TCGCGCTGGCGGATCTGGCGGCGTCGGCCTGTAGAAGGAAGGTGCCCAAG
CCACCCCCGGGGTACAAACACAAACGCACCCCGGGCTTCCCCCTGGCAGA
CCTGGAACTCCTCTTAGGGCATGTGCTGAACGCTCTCGGGCCGGATCTGG
CGACGGCCAAGGGTGATGTGGCGTCTCCGCAGCACGCAGAAGGGAAGGCG
CCAGTGAACAATAAGAGGCCACGGAGTTCGCGAAATTGTAGTGGTAGTCA
AAGCAATAGTAGTGAAAGTAGGGTAGAGGGCGGGACCAAGAAGAGAAGGT
CCGGAGACCAGCACCAAAATACCGGTACCGGTGCAGTCATGAACAGCAAC
GGGCAGAAAGAAGCCTCGGGAAACGGACGGTCTCCGATAGACGAACTGGG
AGAACGAAGGTCGAGACAAGCGGGCGCCGCCTCGAAGGTAAGCCCGGGGG
ATGCGTCGGAAGCGGAAGCGGAGGCAGAGGCGCAACCCTCGGCGGAGGCG
GAGCAAGAGAAAAAGCCGGAGGCGGCGGACCTAACGGAGGCAAAGAGAGC
GTTCTCTCGAGTGCTGTGTGTGTGGGAAGGAGCGGCGACGGAGGGGAAAC
GTGGGCTCCACCAGAGGGTCATCGCAAGACTGGGTAGGATGTTGGCGCAA
GCGGAGGTGGAAGCAGAGACAAAGGCGACCGGAATGGACGTGCAGCCGGC
GATAGACTTCTTTACGGAGGACTACAAAAGGCGGTATCATGCGGCGCTCA
CCCTGCTTATGGATTTCTACGCCGCGGACGTGGTCGCAGCCACAGCCAGA
GTCGCTAATAGCAGCAGCAGTAAAAACGGCGTCGAAACGAGTGAGAAAAA
TAAAGATCCGGCGGGGGACGAGTCCGGGCGAGCCAAGAGAGGGCAAGGGT
TCGAGGTATACGACAAGGCACTACTGACCCTGCTGACTAGATTGTCCGAG
TCGCTGGAGTCAACGTGGCGGCAGAAGCTGTTCACGCAGACGTTGCTCGA
TTGTCCCCGCGTGCCGCAGGCGGCCCTGGAGGCGGTGTGCGGTCTATGTC
AAGCGGTCTCCAGGCCGCACGACGTGCAGACTGCGGCGATAGACTTCTTT
ACGGAGGACTACAAAAGGCGGTATCATGCGGCGCTCACCCTGCTTATGGA
TTTCTACGCCGCGGACGTGGTCGCAGCCACAGCCAGAGTCGCTAATAGCA
GCAGCAGTAAAAACGGCGTCGAAACGAGTGAGAAAAATAAAGATCCGGCG
GGGGACGAGTCCGGGCGAGCCAAGAGAGGGCAAGGGTTCGAGGTATACGA
CAAGGCACTACTGACCCTGCTGACTAGATTGTCCGAGTCGCTGGAGTCAA
CGTGGCGGCAGAAGCTGTTCACGCAGACGTTGCTCGATTGTCCCCGCGTG
CCGCAGGCGGCCCTGGAGGCGGTGTGCGGTCTATGTCAAGCGGTCTCCAG
GCCGCACGACGTGCAGACTGGTCTGGTTACGCTAAAGGACTTGATATTCC
ACAAGCCAGCAACAAGGAGCGTGTGCGTGCCCAGCGTTCTTCATCTGACC
CACCATTCGGACAATGACGTCAGAACCAAAGCCGTTCGCCTGGCCGCCAA
TCTACTATGGCCGGATCCGGCGTTCACGGCTACTGTAGAGGCGTTCGCGA
AGCAGGTCTGGTTACGCTAAAGGACTTGATATTCCACAAGCCAGCAACAA
GGAGCGTGTGCGTGCCCAGCGTTCTTCATCTGACCCACCATTCGGACAAT
GACGTCAGAACCAAAGCCGTTCGCCTGGCCGCCAATCTACTATGGCCGGA
TCCGGCGTTCACGGCTACTGTAGAGGCGTTCGCGAAGCAGGCGCTGGCGA
GCGTTCGTTCTCCGGAGACCAAGGTGGTAGATGTGAAAAAGGAGGAGGAG
AAAGAAGAAAAGACGCCACCACAAGAACAAGAAGCACAAGAGGCGCTGGC
GAGCGTTCGTTCTCCGGAGACCAAGGTGGTAGATGTGAAAAAGGAGGAGG
AGAAAGAAGAAAAGACGCCACCACAAGAACAAGAAGCACAAGAGCAAGAT
GTGGTGGACTTTGAGGACGACGAGGAGGATGAAGTTGAGACACCGCTCCC
CGCGCCGCCTCCGGCGATGATCGTGGCCAGTCCGTGGCTGGCGCCGCCGG
AAACGGAAACCGTTGCGAGGACTCGGTTGTCCCTTTACTTCGCCCTCTGC
GTAAAGTCGCGTCAGATGCTTGCCGGACTGTTAGAAGCCCACGTCACGGC
CGCCTCCGCCGCTAAAGCGGGGTTAATAGCGGAGCTACCGTTGCTCGCGA
GAGCGGCGGCGAAAGGATTCGGGGAGCAGGGGGTTGTTGGACTGATGGGG
GCGGCACCCTCTGGAGCTAAGACGTTGGTGTTAGCGATGCTGGATCTGCT
GGTGCCAAAGGAGACGAACAAGCCGTCACAGGAACTGGTTGTCGCCGTGC
GACGACTGAGACAAGCTCGCGTAGCTGCCTTAGCGGAGACGGTAAGGCAC
TGTTTTGACTGTTATAACATACTCTACCGCTCTCGCAAGATGTGGTGGAC
TTTGAGGACGACGAGGAGGATGAAGTTGAGACACCGCTCCCCGCGCCGCC
TCCGGCGATGATCGTGGCCAGTCCGTGGCTGGCGCCGCCGGAAACGGAAA
CCGTTGCGAGGACTCGGTTGTCCCTTTACTTCGCCCTCTGCGTAAAGTCG
CGTCAGATGCTTGCCGGACTGTTAGAAGCCCACGTCACGGCCGCCTCCGC
CGCTAAAGCGGGGTTAATAGCGGAGCTACCGTTGCTCGCGAGAGCGGCGG
CGAAAGGATTCGGGGAGCAGGGGGTTGTTGGACTGATGGGGGCGGCACCC
TCTGGAGCTAAGACGTTGGTGTTAGCGATGCTGGATCTGCTGGTGCCAAA
GGAGACGAACAAGCCGTCACAGGAACTGGTTGTCGCCGTGCGACGACTGA
GACAAGCTCGCGTAGCTGCCTTAGCGGAGACGGTAAGGCACTGTTTTGAC
TGTTATAACATACTCTACCGCTCTCGGCACGCTACTGGGGTCGAGTACAT
GGTGCCCGTCCTGGGTGGATTAGGGCGCGAAGGCGTGGCGTTGGAACTGC
CCGCCTTGTTGCAGGCACGCTACTGGGGTCGAGTACATGGTGCCCGTCCT
GGGTGGATTAGGGCGCGAAGGCGTGGCGTTGGAACTGCCCGCCTTGTTGC
AGGCTGATGACGCTATAGTGAGGACGGGCTTCCGGCGGCTTACGCATCCC
GCGAAGGGGGCCACATACACTCCGGCGGAGCTTGTGGTACTCCTGAACGA
CTTCGATCATGTGGCGGCGGGAGTGCCCATGAAGCGCCTCACGAGTGCCC
TGTCTTTGTGTCTTGACAACAAGGCTGATGACGCTATAGTGAGGACGGGC
TTCCGGCGGCTTACGCATCCCGCGAAGGGGGCCACATACACTCCGGCGGA
GCTTGTGGTACTCCTGAACGACTTCGATCATGTGGCGGCGGGAGTGCCCA
TGAAGCGCCTCACGAGTGCCCTGTCTTTGTGTCTTGACAACAAGGTGGTA
TACAACTACGCCGTCCTGCGCGAAGCGCTCAACGTTATGTCTCAGGTTCC
ACCGCCTGGCGCAAGCGCGAAACAGCTCCCTCTGCTCCTAATGCGCACGG
TCATCATGTCCGTCACGAAGTTCGCCGATCTAAAGAACTTCGTCGCCACC
GTGGTGCTGGTTCGATTGGTACAGCACAAGGTGGTATACAACTACGCCGT
CCTGCGCGAAGCGCTCAACGTTATGTCTCAGGTTCCACCGCCTGGCGCAA
GCGCGAAACAGCTCCCTCTGCTCCTAATGCGCACGGTCATCATGTCCGTC
ACGAAGTTCGCCGATCTAAAGAACTTCGTCGCCACCGTGGTGCTGGTTCG
ATTGGTACAGCACAAGGTCTGGACGCAGCCGCGAATTTGGGACGGATTTT
TGCGGTGCTCCAAAATGATGGCCAAGGAGTCGGGGGCGACATCCTTCATT
GCCATGGTGCAGCTGCCCGCAGCCAGGTTGAAGGAGGCGCTCGCCAGCCC
CATGATGAAGGTCTGGACGCAGCCGCGAATTTGGGACGGATTTTTGCGGT
GCTCCAAAATGATGGCCAAGGAGTCGGGGGCGACATCCTTCATTGCCATG
GTGCAGCTGCCCGCAGCCAGGTTGAAGGAGGCGCTCGCCAGCCCCATGAT
GAAGGGAGTAAAGGAATCCTTGCGGCGGTATGCGCAGACGCTGGTTAAAG
TTGATTCAGGGGTCAGAGCTGTGCTGGGAATGGAGGTCGGTGGCGCAGAA
TCAGTCTCGAAGAAAATCTAGGGAGTAAAGGAATCCTTGCGGCGGTATGC
GCAGACGCTGGTTAAAGTTGATTCAGGGGTCAGAGCTGTGCTGGGAATGG
AGGTCGGTGGCGCAGAATCAGTCTCGAAGAAAATCTAG
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