mRNA_H-elongata_contig181543.4861.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig181543.4861.1
Unique NamemRNA_H-elongata_contig181543.4861.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0JZQ3_9PHAE (ABC transporter domain-containing protein n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0JZQ3_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 1.460e-158
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 1
Query:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKK+KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKNKSIILITHYKRLLEYIKPDFIHVMQD 230          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0JYB8_MACPY (ABC transporter domain-containing protein n=30 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYB8_MACPY)

HSP 1 Score: 412 bits (1058), Expect = 3.080e-144
Identity = 206/230 (89.57%), Postives = 222/230 (96.52%), Query Frame = 1
Query:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            M+KN +VPLLE+KNLHA+I+  KILKGV+L IFEGEIHAIMGTNGSGKSTLSK+IAGHPSY +TEGEILF+G+NICDLDPDLRSHLG+FLAFQYPVEIAGVDNQEFLQAIYNAKQVSM+LP+VNPLFFYELLREKL MVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETIN LM+ KSKS+ILITHYKRLLEYI+PDFIHVMQD
Sbjct:    1 MSKNNKVPLLEIKNLHANIDGTKILKGVDLCIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYEVTEGEILFQGQNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMDLPKVNPLFFYELLREKLKMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINTLMKNKSKSVILITHYKRLLEYIRPDFIHVMQD 230          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A6G6D7A2_ECTSI (ABC transporter domain-containing protein n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7A2_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 2.440e-143
Identity = 204/227 (89.87%), Postives = 218/227 (96.04%), Query Frame = 1
Query:   10 NIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            N  +PLLE++NLHA+INNNKIL+GVNLSIFEGEIHAIMGTNGSGKSTLSK+IAGHPSY + EGEILF+GKNICDLDPDLRSHLG+FLAFQYPVEIAGVDNQEFL+AIYNAKQVSMNLP+ NPLFFYELLREKL MV LDESFISRNVNEGFSGGEKKRNEILQFALLDS LGILDETDSGLDIDALKSIS+TIN+LME K+KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct:    3 NKTIPLLEIRNLHANINNNKILRGVNLSIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYDVIEGEILFQGKNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLEAIYNAKQVSMNLPKANPLFFYELLREKLKMVNLDESFISRNVNEGFSGGEKKRNEILQFALLDSILGILDETDSGLDIDALKSISKTINILMENKNKSIILITHYKRLLEYIKPDFIHVMQD 229          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A2R4QQ20_9PHAE (Iron-sulfur cluster formation ABC transporter ATP-binding subunit n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ20_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.090e-137
Identity = 196/230 (85.22%), Postives = 221/230 (96.09%), Query Frame = 1
Query:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            M KNI+VPLLE++NLHA+IN+NKILKGVNLSI+EGE+HAIMG NGSGKSTLSK+IAGHPSY I +GEILF+GK+I +LDPDLRSHLG+FLAFQYPVEIAG+DNQEFL+AIYNAK++SMNLP+VNPLFFYELLR+KL MVKLDESFISRNVNEGFSGGEKKRNEILQFALLDS+LGILDETDSGLDIDALKSISETIN +++ ++KSIILITHYKRLLEYIKPDFIHVM D
Sbjct:    1 MIKNIKVPLLEIRNLHANINDNKILKGVNLSIYEGEVHAIMGINGSGKSTLSKVIAGHPSYNIIKGEILFQGKDISNLDPDLRSHLGLFLAFQYPVEIAGLDNQEFLEAIYNAKRLSMNLPKVNPLFFYELLRKKLKMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSQLGILDETDSGLDIDALKSISETINTIIKTENKSIILITHYKRLLEYIKPDFIHVMDD 230          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A120HYF8_9PHAE (SufC n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A120HYF8_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 3.130e-134
Identity = 191/230 (83.04%), Postives = 218/230 (94.78%), Query Frame = 1
Query:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            M K  ++PLLE+KNLHA+I+++KILKG+NLSIFEGE+HAIMG NGSGKSTLSK+IAGHPSY+IT+GEILFEGK+I +L+PDLRSHLG+FLAFQYP+EIAGVDNQEFL AIYNAKQ+S +LP+VNPL FYEL++EKL MVKLDE FISRNVNEGFSGGEKKRNEILQFALLDSK+GILDETDSGLDIDALKSISETIN L++KK+KSIILITHYKRLLEYIKPDFIH+M D
Sbjct:    1 MIKKTKLPLLEIKNLHANIDDSKILKGINLSIFEGEVHAIMGVNGSGKSTLSKVIAGHPSYSITKGEILFEGKDISNLEPDLRSHLGLFLAFQYPIEIAGVDNQEFLAAIYNAKQLSRDLPKVNPLTFYELVKEKLKMVKLDERFISRNVNEGFSGGEKKRNEILQFALLDSKVGILDETDSGLDIDALKSISETINTLIKKKNKSIILITHYKRLLEYIKPDFIHIMDD 230          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8E6D6C7_9PHAE (Iron-sulfur cluster formation ABC transporter n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6C7_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 8.260e-126
Identity = 181/230 (78.70%), Postives = 204/230 (88.70%), Query Frame = 1
Query:    1 MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            MN N ++PLLE+KNLHA IN NKIL GVNLSIF G+IHAIMGTNGSGKSTLSKII GHPSYT+TEGEILF G+NIC+L+PD RSH+G+FLAFQYPVEIAGV N++FL+  YNAKQ   NLP ++PL F+ +++EKL M+K+D SF+ RN+NEGFSGGEKKRNEILQFALLDS LGILDETDSGLDIDALKSISETIN LM  K KSIILITHYKRLLEYIKPDFIHVMQD
Sbjct:    1 MNNNRKIPLLEIKNLHATINGNKILNGVNLSIFPGQIHAIMGTNGSGKSTLSKIIVGHPSYTLTEGEILFMGQNICELEPDARSHIGLFLAFQYPVEIAGVGNEDFLRLAYNAKQTYFNLPVIDPLDFHMIMQEKLEMIKMDPSFLQRNLNEGFSGGEKKRNEILQFALLDSILGILDETDSGLDIDALKSISETINQLMLNKEKSIILITHYKRLLEYIKPDFIHVMQD 230          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8F0F7B5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7B5_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 1.020e-122
Identity = 177/225 (78.67%), Postives = 204/225 (90.67%), Query Frame = 1
Query:   16 RVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            ++P+LE+KNLHA+I + +ILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYT+TEGEILFEGKNIC+LDPD+RSHLG+FLAFQYPVE+ GV N+ FL+A   AK+    LP +N L F  LL EK+ MVKL++SF+SRNVNEGFSGGEKKRNEILQFA+LDSK+GILDETDSGLDIDALKSIS++IN LM KK+KSIILITHYKRLLEY+KPDF+HVMQD
Sbjct:    4 KMPILEIKNLHANIEDTQILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTLTEGEILFEGKNICELDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTLEFTNLLLEKMRMVKLEKSFLSRNVNEGFSGGEKKRNEILQFAVLDSKIGILDETDSGLDIDALKSISDSINQLMLKKNKSIILITHYKRLLEYVKPDFVHVMQD 228          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A2I4Q2M5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M5_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.150e-113
Identity = 169/224 (75.45%), Postives = 196/224 (87.50%), Query Frame = 1
Query:   19 VPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            +PLLEVKNLHA ++  +ILKGVNLSIF+GEIHAIMGTNGSGKSTLSKIIAGHPSY + EGEILF+GK+IC LDP+ RSHLG+FLAFQYPVE+ GV+N+ FL+A   A++ S +LP +N L F  LL EKL +VKLD++F++RNVNEGFSGGEKKRNEI QFA+LDS+L ILDETDSGLDIDALKSIS  IN LM KK+KSIILITHYKRLLEYIKPDFIHVM +
Sbjct:    5 IPLLEVKNLHAQVDEVEILKGVNLSIFKGEIHAIMGTNGSGKSTLSKIIAGHPSYQLIEGEILFKGKDICLLDPESRSHLGLFLAFQYPVELTGVNNEAFLKAAVTAQRQSKDLPPLNSLEFTSLLLEKLKLVKLDKNFLARNVNEGFSGGEKKRNEIFQFAVLDSELAILDETDSGLDIDALKSISNAINELMAKKAKSIILITHYKRLLEYIKPDFIHVMHN 228          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: A0A8E5BHM2_9PHAE (FeS cluster assembly suf system ATPase SufC n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BHM2_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 8.770e-110
Identity = 166/227 (73.13%), Postives = 194/227 (85.46%), Query Frame = 1
Query:   10 NIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            N +VPLLE+KNLH +IN  KILKG++L+IFEGEIHAIMG NGSGKSTLSK+IAGHPSY I +G+ILF+G NI  L+P+LRSHLG+FLAFQYP+EI GV+N EFLQ++YN KQ +M L   NPL FYELL +K+  V+LD+SF+ RNVNEGFSGGEKKRNEILQF LLDS LGI DETDSGLDID+LKSIS+TIN L  +K K IILITHYKRLLE IKPDFIH+M +
Sbjct:    2 NNKVPLLEIKNLHVNINEIKILKGIDLTIFEGEIHAIMGKNGSGKSTLSKVIAGHPSYKIVKGDILFKGINISTLEPNLRSHLGLFLAFQYPIEIPGVNNLEFLQSMYNTKQRAMYLSVTNPLNFYELLLDKIKQVQLDKSFLFRNVNEGFSGGEKKRNEILQFLLLDSILGIFDETDSGLDIDSLKSISQTINSLKLEK-KGIILITHYKRLLEKIKPDFIHIMSN 227          
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Match: B7T1Z2_VAULI (ABC ATPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Z2_VAULI)

HSP 1 Score: 317 bits (812), Expect = 6.580e-107
Identity = 160/222 (72.07%), Postives = 188/222 (84.68%), Query Frame = 1
Query:   25 LLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNVNEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLMEKKSKSIILITHYKRLLEYIKPDFIHVMQD 690
            +LEVKNLH  I+N +ILKGVN S+  GEIHAIMG NGSGKST SKI+AGHPSY IT GEIL+ G+NICD DPD+R+H GIFLAFQYPVEI GV+N++FL+  YN++Q ++   E+ PL F E+L EKL +V LD  F+SRNVNEGFSGGEKKRNEILQFALL+S+LGILDE DSGLDIDALK+ISE +N L++ K KSIILITHYKRLLEYIKPDFIHVM +
Sbjct:    6 MLEVKNLHVTIDNIEILKGVNFSLNSGEIHAIMGPNGSGKSTFSKILAGHPSYKITSGEILYNGENICDFDPDIRAHKGIFLAFQYPVEIPGVNNEDFLRLAYNSRQKALQQNELEPLKFLEVLVEKLKLVNLDPIFLSRNVNEGFSGGEKKRNEILQFALLNSELGILDEMDSGLDIDALKTISEAVN-LLKTKDKSIILITHYKRLLEYIKPDFIHVMMN 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181543.4861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZQ3_9PHAE1.460e-15899.57ABC transporter domain-containing protein n=2 Tax=... [more]
A0A8F0JYB8_MACPY3.080e-14489.57ABC transporter domain-containing protein n=30 Tax... [more]
A0A6G6D7A2_ECTSI2.440e-14389.87ABC transporter domain-containing protein n=9 Tax=... [more]
A0A2R4QQ20_9PHAE1.090e-13785.22Iron-sulfur cluster formation ABC transporter ATP-... [more]
A0A120HYF8_9PHAE3.130e-13483.04SufC n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A120... [more]
A0A8E6D6C7_9PHAE8.260e-12678.70Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A8F0F7B5_9PHAE1.020e-12278.67ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2I4Q2M5_9PHAE1.150e-11375.45ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8E5BHM2_9PHAE8.770e-11073.13FeS cluster assembly suf system ATPase SufC n=1 Ta... [more]
B7T1Z2_VAULI6.580e-10772.07ABC ATPase n=1 Tax=Vaucheria litorea TaxID=109269 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181543contigH-elongata_contig181543:1..690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.5
Seed ortholog evalue1.1e-111
Seed eggNOG ortholog2880.D1J705
Preferred nameycf16
KEGG koko:K09013
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.ATPase activity
EggNOG OGs2QS88@2759,COG0396@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size690
Cds size690
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930047.0257833-CDS-H-elongata_contig181543:0..6901622930047.0257833-CDS-H-elongata_contig181543:0..690Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig181543 1..690 -
1691679260.1831176-CDS-H-elongata_contig181543:0..6901691679260.1831176-CDS-H-elongata_contig181543:0..690Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig181543 1..690 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181543.4861.1prot_H-elongata_contig181543.4861.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig181543 1..690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig181543.4861.1

>prot_H-elongata_contig181543.4861.1 ID=prot_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MNKNIRVPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKST
LSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAG
VDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVKLDESFISRNV
NEGFSGGEKKRNEILQFALLDSKLGILDETDSGLDIDALKSISETINVLM
EKKSKSIILITHYKRLLEYIKPDFIHVMQD
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mRNA from alignment at H-elongata_contig181543:1..690-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig181543.4861.1 ID=mRNA_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=690bp|location=Sequence derived from alignment at H-elongata_contig181543:1..690- (Himanthalia elongata Himel1 dioecious)
ATGAATAAAAATATTAGAGTACCACTTTTAGAAGTAAAAAATTTGCATGC TCATATTAATAATAATAAAATTTTAAAAGGAGTTAATTTATCGATTTTTG AAGGAGAAATACATGCTATAATGGGGACAAATGGTTCTGGAAAAAGCACA CTTTCTAAAATAATTGCTGGTCATCCATCTTATACTATTACCGAAGGAGA AATATTATTCGAAGGGAAAAATATTTGCGATTTAGATCCAGACTTACGTT CTCATTTAGGAATATTTTTAGCTTTTCAATACCCTGTTGAGATTGCAGGT GTTGATAACCAAGAATTTTTACAGGCAATCTACAATGCAAAACAAGTCTC AATGAATTTACCAGAAGTTAATCCTCTATTCTTTTATGAGTTATTAAGAG AAAAATTAAGCATGGTTAAATTAGACGAAAGTTTTATTTCTAGAAATGTT AATGAAGGTTTTTCTGGAGGAGAAAAAAAACGAAATGAGATTCTTCAGTT TGCATTATTAGATTCGAAACTTGGCATTCTTGATGAAACAGATTCAGGTC TAGATATCGATGCATTAAAATCTATTTCTGAGACAATTAATGTATTAATG GAAAAAAAAAGTAAAAGTATAATTCTTATTACACATTATAAAAGATTATT AGAATATATAAAACCAGATTTTATTCATGTAATGCAAGAT
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Coding sequence (CDS) from alignment at H-elongata_contig181543:1..690-

>mRNA_H-elongata_contig181543.4861.1 ID=mRNA_H-elongata_contig181543.4861.1|Name=mRNA_H-elongata_contig181543.4861.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig181543:1..690- (Himanthalia elongata Himel1 dioecious)
ATGAATAAAAATATTAGAGTACCACTTTTAGAAGTAAAAAATTTGCATGC
TCATATTAATAATAATAAAATTTTAAAAGGAGTTAATTTATCGATTTTTG
AAGGAGAAATACATGCTATAATGGGGACAAATGGTTCTGGAAAAAGCACA
CTTTCTAAAATAATTGCTGGTCATCCATCTTATACTATTACCGAAGGAGA
AATATTATTCGAAGGGAAAAATATTTGCGATTTAGATCCAGACTTACGTT
CTCATTTAGGAATATTTTTAGCTTTTCAATACCCTGTTGAGATTGCAGGT
GTTGATAACCAAGAATTTTTACAGGCAATCTACAATGCAAAACAAGTCTC
AATGAATTTACCAGAAGTTAATCCTCTATTCTTTTATGAGTTATTAAGAG
AAAAATTAAGCATGGTTAAATTAGACGAAAGTTTTATTTCTAGAAATGTT
AATGAAGGTTTTTCTGGAGGAGAAAAAAAACGAAATGAGATTCTTCAGTT
TGCATTATTAGATTCGAAACTTGGCATTCTTGATGAAACAGATTCAGGTC
TAGATATCGATGCATTAAAATCTATTTCTGAGACAATTAATGTATTAATG
GAAAAAAAAAGTAAAAGTATAATTCTTATTACACATTATAAAAGATTATT
AGAATATATAAAACCAGATTTTATTCATGTAATGCAAGATATGAATAAAA
ATATTAGAGTACCACTTTTAGAAGTAAAAAATTTGCATGCTCATATTAAT
AATAATAAAATTTTAAAAGGAGTTAATTTATCGATTTTTGAAGGAGAAAT
ACATGCTATAATGGGGACAAATGGTTCTGGAAAAAGCACACTTTCTAAAA
TAATTGCTGGTCATCCATCTTATACTATTACCGAAGGAGAAATATTATTC
GAAGGGAAAAATATTTGCGATTTAGATCCAGACTTACGTTCTCATTTAGG
AATATTTTTAGCTTTTCAATACCCTGTTGAGATTGCAGGTGTTGATAACC
AAGAATTTTTACAGGCAATCTACAATGCAAAACAAGTCTCAATGAATTTA
CCAGAAGTTAATCCTCTATTCTTTTATGAGTTATTAAGAGAAAAATTAAG
CATGGTTAAATTAGACGAAAGTTTTATTTCTAGAAATGTTAATGAAGGTT
TTTCTGGAGGAGAAAAAAAACGAAATGAGATTCTTCAGTTTGCATTATTA
GATTCGAAACTTGGCATTCTTGATGAAACAGATTCAGGTCTAGATATCGA
TGCATTAAAATCTATTTCTGAGACAATTAATGTATTAATGGAAAAAAAAA
GTAAAAGTATAATTCTTATTACACATTATAAAAGATTATTAGAATATATA
AAACCAGATTTTATTCATGTAATGCAAGAT
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