mRNA_H-elongata_contig181371.4853.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A6A5PAZ3_LUPAL (Uncharacterized protein (Fragment) n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5PAZ3_LUPAL) HSP 1 Score: 62.0 bits (149), Expect = 4.280e-9 Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 61 WWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDK 264
WW TYG P+L ++A+C S+ +++G ERNWS +E + + R+ ++ LVFVR NLRLQ K
Sbjct: 409 WWETYG-CRTPNLQRLAVCVLSQTCSASGCERNWSAFEHIHTNKRNRLEHKKLNDLVFVRYNLRLQQK 475
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A2K3K1Y4_TRIPR (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K1Y4_TRIPR) HSP 1 Score: 58.5 bits (140), Expect = 8.070e-9 Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 61 WWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKDPPKR 279
WW YG P+L K+AI S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ+++ K+
Sbjct: 3 WWEMYGTEA-PNLKKLAIRILSQTCSASGCERNWSVFEHIHSKKRNRLEHQKLNDLVFVRYNLRLQNRNQKKQ 74
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: UPI00092ED33F (uncharacterized protein LOC109339874 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092ED33F) HSP 1 Score: 60.8 bits (146), Expect = 1.060e-8 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 52 PAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKD 267
P WW +YG G P+L ++AI S+ +S+G ERNWS++E + + R+ ++ LV+VR NLRLQ ++
Sbjct: 260 PDQWWESYG-CGAPNLQQLAIRILSQTYSSSGCERNWSVFEHIHSNKRNRLEHQKLNDLVYVRYNLRLQQRN 330
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A2Z6NFM0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NFM0_TRISU) HSP 1 Score: 60.5 bits (145), Expect = 1.490e-8 Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 52 PAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKDPPK 276
P WW YG P+L K+AI S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ+++ K
Sbjct: 510 PDQWWEMYGTEA-PNLKKLAIWILSQTCSASGCERNWSVFEHIQSKKRNRLEHQKLNDLVFVRYNLRLQNRNKKK 583
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A6N2KDR5_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KDR5_SALVM) HSP 1 Score: 60.5 bits (145), Expect = 1.510e-8 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 1 TGKFKGHMFLPYAQNMSPAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKDPPK 276
TG F + + + ++P WW +G +L K AI S+ ++ G ERNWS++E + R R+ +R LVFVR NLR+Q ++ K
Sbjct: 512 TGDFGMALAIHQREKLNPVAWWEQFGN-DTQELQKFAIRVLSQCCSATGCERNWSVFEFIHSKRRNRLEHKRLNDLVFVRYNLRIQQRNLSK 602
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A6A5MXA4_LUPAL (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MXA4_LUPAL) HSP 1 Score: 58.5 bits (140), Expect = 1.890e-8 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 61 WWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDK 264
WW TYG P+L K+A+ S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ +
Sbjct: 5 WWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 71
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A6A5PAT6_LUPAL (Uncharacterized protein (Fragment) n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5PAT6_LUPAL) HSP 1 Score: 60.1 bits (144), Expect = 2.040e-8 Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 61 WWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDK 264
WW TYG L +L K+A+C S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ +
Sbjct: 417 WWETYGCRTL-NLQKLAVCVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKFNDLVFVRYNLRLQQR 483
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: UPI00092EBF14 (uncharacterized protein LOC109333050 n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092EBF14) HSP 1 Score: 59.7 bits (143), Expect = 2.140e-8 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 52 PAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKD 267
P WW +YG G P+L ++AI S+ +++G ERNWS++E + + R+ ++ LV+VR NLRLQ ++
Sbjct: 119 PDQWWESYG-CGAPNLQQLAIRILSQTCSASGCERNWSVFEHIHSNKRNRLEHQKLNDLVYVRYNLRLQQRN 189
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: A0A6A5M7K7_LUPAL (Phosphopyruvate hydratase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5M7K7_LUPAL) HSP 1 Score: 59.7 bits (143), Expect = 2.840e-8 Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 52 PAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDK 264
P WW TYG P+L K+A+ S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ +
Sbjct: 676 PDQWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 745
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Match: UPI00092F4EA0 (uncharacterized protein LOC109333975 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F4EA0) HSP 1 Score: 58.9 bits (141), Expect = 4.950e-8 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 61 WWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYEDVMGGRHARMGPERARKLVFVRANLRLQDKD 267
WW TYG P+L K+A+ S+ +++G ERNWS++E + + R+ ++ LVFVR NLRLQ ++
Sbjct: 249 WWETYG-CRAPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQRN 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181371.4853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig181371.4853.1 >prot_H-elongata_contig181371.4853.1 ID=prot_H-elongata_contig181371.4853.1|Name=mRNA_H-elongata_contig181371.4853.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp MFLPYAQNMSPAGWWVTYGKIGLPDLAKVAICTTSKVPASAGSERNWSLYback to top mRNA from alignment at H-elongata_contig181371:211..504- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig181371.4853.1 ID=mRNA_H-elongata_contig181371.4853.1|Name=mRNA_H-elongata_contig181371.4853.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=294bp|location=Sequence derived from alignment at H-elongata_contig181371:211..504- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig181371:211..504- >mRNA_H-elongata_contig181371.4853.1 ID=mRNA_H-elongata_contig181371.4853.1|Name=mRNA_H-elongata_contig181371.4853.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=546bp|location=Sequence derived from alignment at H-elongata_contig181371:211..504- (Himanthalia elongata Himel1 dioecious)back to top |