mRNA_H-elongata_contig1813.4848.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: B1N8E9_9PHAE (Glutathione S-transferase 4 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E9_9PHAE) HSP 1 Score: 190 bits (482), Expect = 2.130e-56 Identity = 97/199 (48.74%), Postives = 139/199 (69.85%), Query Frame = 1
Query: 49 PISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASKFKYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEWYSSK 645
P YF +P RGEA R+AL + G+++ DK ++++E A +FK +PV Q++GT+Y+QST+LLRY G L G +P+ PL +LKVDE+VM AED+FI + +TM KD KKLE + GKIK++LE + K + S F G S+TIAD+ +HA++ +++ G L GIPTT+V D PSLK + VME+PKVK +Y+SK
Sbjct: 2 PAVFNYFGIPARGEATRVALAVAGVDYEDKRMSFEEFGACEFKTLPVYQMDGTDYTQSTALLRYAGKLGGQYPECPLASLKVDEIVMIAEDVFINLFSTMGEKDEAKKLEKCQTLMAGKIKDLLEDIARKVEANKCSTFCVGASLTIADIQVHAVIATVQAGFLTGIPTTMVEDICPSLKALDHAVMEHPKVKAYYASK 200
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: D7G537_ECTSI (Glutathione S-transferase n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G537_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.720e-46 Identity = 93/204 (45.59%), Postives = 130/204 (63.73%), Query Frame = 1
Query: 40 MTAPISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASKF--KYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEWYSSK 645
M + +L YF +PGRGEA R+AL G +F D + + E A K+ K +PVL+++ Y+QST+LLRY G L GL+P D L ALKVDE+VM AED+ + M +D K EGKIK ++ L AK + +PSSKFF G S TIADL +HA++ + E L G+PTT ++D AP+L + ++E+PKVK +Y+SK
Sbjct: 1 MPSTATLNYFGLPGRGEATRVALAYAGKDFEDNRMGFPEYGACKWAGKGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCMGQEDDT----VAKEVLEGKIKTLVGMLVAKLAANPSSKFFVGNSPTIADLQVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPKVKAYYASK 200
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: D7G5G1_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G1_ECTSI) HSP 1 Score: 140 bits (353), Expect = 9.670e-37 Identity = 83/198 (41.92%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 40 MTAPISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASKFKYV--PVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLI--IHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPK 621
M + +L+YF+ PGR EA R+AL G +F D + + E ASK+ + PVL+++ Y+QST+LLRY G L GL+P D L ALKVDE+VM AED+ + + KD EGKIK ++E L ++ + + SSKFF G TIADL +HA++ + E L G+PTT ++D AP+L + ++E+PK
Sbjct: 1 MPSTATLHYFDDPGRAEATRVALAYAGKDFEDNIMGFPEYGASKWAGIGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCVDQKDDT----MANGLLEGKIKTLVEMLTSRLAANASSKFFVGHPPTIADLQARVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPK 194
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: A0A6H5JNS9_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS9_9PHAE) HSP 1 Score: 139 bits (351), Expect = 6.640e-36 Identity = 80/186 (43.01%), Postives = 117/186 (62.90%), Query Frame = 1
Query: 76 PGRGEAIRIALVLGGIEFNDKHLTYQELSASKF--KYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVK 627
PGRGEA +AL GG +F D + + E A K+ K +PVL+++ Y QST+LLRY G + GL+P D L AL+VDE+VM AED+ + M D K EGKIK ++E L AK +T+ SSKFF G S TIA+L +HA++ + E L +PTT+++D AP++ + + ++++PK K
Sbjct: 55 PGRGEATGVALAYGGKDFVDNTMGFSEHGACKWAGKGLPVLEMDDAEYFQSTALLRYAGKMGGLYPDDALAALEVDEIVMIAEDVLTNMFKCMGQTDDT----VAKGVLEGKIKTLVEMLVAKLATNQSSKFFVGNSPTIANLQVHAVIKNFEANFLTDLPTTLIADTAPTVMEMEVALLQDPKEK 236
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: D7G5G0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G0_ECTSI) HSP 1 Score: 129 bits (324), Expect = 3.880e-33 Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 40 MTAPISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASKF--KYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADL 498
M++ +L YF +PGR EA R+AL G EF+DK LT+ E A K+ K +PVLQ++G Y+QST+LLRY G L GL+P D L ALKVDE+VM ED+ + M +D K EGK+K ++E L +K + +PSSKFF G S TIADL
Sbjct: 1 MSSTPTLNYFELPGRAEATRVALAYAGKEFDDKRLTFPEYGACKWAGKGLPVLQMDGAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIGEDILANMFKCMGAEDDT----VAKGVLEGKVKGLVELLVSKLAANPSSKFFVGTSPTIADL 151
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: A6G3Q7_9DELT (Glutathione S-transferase-like protein n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6G3Q7_9DELT) HSP 1 Score: 124 bits (311), Expect = 9.250e-31 Identity = 77/208 (37.02%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 40 MTAP-ISLYYFNVPG-RGEAIRIALVLGGIEFNDKHLTYQELSASK--FKY--VPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEWYSSK 645
MT P +++ YF+V G RGEA R+AL +GGI F D L + E A K F Y +P L ++G ++S + RYV TL GL+P DP+E L+ DE++ AED+ I +M + D E K AR+A V L + +++F GE++TIAD+ + + + G D IPT +V AP+L V+ +PK++E+Y+++
Sbjct: 1 MTHPDLAITYFDVDGGRGEAARLALFIGGIPFKDDRLAFPEFGARKSSFPYGKIPTLTVDGVEIAESVGINRYVATLAGLYPADPIEGLRCDEILSVAEDMSNLIGPSMRMPDGEAKQAAREALVANDYPRVFAQLARRLG---DNQWFVGETMTIADIRVFVFLRAFAFGAFDHIPTDLVPRLAPTLAAHSERVLAHPKIREYYAAR 205
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: A0A1S8VHC2_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VHC2_9FUNG) HSP 1 Score: 124 bits (310), Expect = 1.330e-30 Identity = 72/200 (36.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 52 ISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASK----FKYVPVLQING-TNYSQSTSLLRYVGTLVGLFPK-DPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEW 633
+ L YF + R EA R+AL +GG+ F D+ ++ + A K F +P+L ING T +QS ++LRY G+L GL+P DP++A VD++VM ED+ + +T+ KDPE K++ RK A+ K + ++LE S K+ G+SI++ADL I+ +++ ++ G DG+P + + + ++ V+ +PKV EW
Sbjct: 8 LKLTYFGIRARAEASRLALYVGGVPFEDERVSGEGWGAMKQATPFGQLPLLTINGSTQIAQSNAILRYAGSLGGLYPAADPIKAALVDQIVMHIEDMSNTVYSTVREKDPEVKMQQRKVIAQDKYPAMFKSLEQVIEKHSSGKWAVGDSISVADLAIYVLIVLIKTGIWDGVPVDVADSFV-RVSAVYTAVLTHPKVAEW 206
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: A0A8K1CB83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB83_PYTOL) HSP 1 Score: 127 bits (319), Expect = 4.760e-30 Identity = 78/203 (38.42%), Postives = 121/203 (59.61%), Query Frame = 1
Query: 40 MTAPISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELS----ASKFKYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPL-EALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEW 633
+T + L YFN PGR E IR+A +LGG+EF D+ + + ++ A F VP L I+G +SQS +LRY GT GL+P L +AL+VDEV+ +DL A++ T + +PE +L ARK A+ ++L L+ K+ K+ G +TIADL I++ ++ + G L GIP T+ ++ ++ I+ +VM P V+EW
Sbjct: 211 VTPKLKLTYFNGPGRAEPIRLAFLLGGVEFEDERIEFGDMEKLRPALPFGQVPTLSIDGEIHSQSLQILRYAGTRAGLYPSTDLKQALRVDEVLCLFDDLHNAVSLTYPM-EPETQLAARKVLAQETFPKLLGALD-KRIAGWGGKYAVGNELTIADLAIYSSILGFKDGHLTGIPATVTDSYSHIVR-IYEQVMNLPTVQEW 410
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: T0QG46_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG46_SAPDV) HSP 1 Score: 122 bits (306), Expect = 4.770e-30 Identity = 75/204 (36.76%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 52 ISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASK----FKYVPVLQINGTNYSQSTSLLRYVGTLVGLFP-KDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKK-STSPSSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEWYSSK 645
+ L YFN PGR E R+AL L I F D+ ++Y E A K F+ +P L ++G ++QS + RYVG L GL+P DPL A +VDEV+ ++D+ + ++ +D EKKL RKA A + + LEA+ + + F GE++++AD+ + + +S+ +DGIPTTI + P I V PKV+ WY+ +
Sbjct: 6 LKLTYFNAPGRAELTRLALFLHDIPFEDERISYNEFMARKPSLPFQQLPTLTVDGEVFAQSHGMARYVGHLTGLYPMSDPLGAYRVDEVLAASDDIVNKLIPSLFERDMEKKLAMRKALAAETLPTLYACLEARLVAANAKGPFLLGETLSLADIELFVMRLSMRSRHMDGIPTTICDKY-PRWNAIADAVAVLPKVQAWYAQR 208
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Match: A0A1V9ZC73_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZC73_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.030e-30 Identity = 76/206 (36.89%), Postives = 121/206 (58.74%), Query Frame = 1
Query: 40 MTAP--ISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASK----FKYVPVLQINGTNYSQSTSLLRYVGTLVGLFPKDPLEALKVDEVVMTAEDLFIAIAATMVIKDPEKKLEARKAAAEGKIKEVLETLEAKKSTSP--SSKFFFGESITIADLIIHAIVMSLECGELDGIPTTIVSDWAPSLKNIHIEVMENPKVKEW 633
MTAP I L YFN+ GR E R+AL +GGIEF D+ L+ ++ K + +PVL ++G ++QS+++ RY G L GL+P DPL AL+VDEV+ A+D+F + T+ D K++ R+ AE K+ + LE + + + F G S+T+ADL ++ + ++ G +G+PTT+ + A + I V +PKV+ W
Sbjct: 1 MTAPRVIKLTYFNLTGRAEIARLALHIGGIEFEDERLSRAVVAERKAILPYGQLPVLTVDGRVFAQSSAIARYAGALSGLYPTDPLAALQVDEVLEHAKDIFDTLVPTLREPDAAKRIAMRQELAERKVAPMCAALERRVAATKVFPGDFLLGSSLTLADLELYLTMGLVKSGWFEGLPTTLCDNHA-TWGGIAQSVARHPKVQSW 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1813.4848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1813.4848.1 >prot_H-elongata_contig1813.4848.1 ID=prot_H-elongata_contig1813.4848.1|Name=mRNA_H-elongata_contig1813.4848.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp MTAPISLYYFNVPGRGEAIRIALVLGGIEFNDKHLTYQELSASKFKYVPVback to top mRNA from alignment at H-elongata_contig1813:11017..14722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1813.4848.1 ID=mRNA_H-elongata_contig1813.4848.1|Name=mRNA_H-elongata_contig1813.4848.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3706bp|location=Sequence derived from alignment at H-elongata_contig1813:11017..14722+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1813:11017..14722+ >mRNA_H-elongata_contig1813.4848.1 ID=mRNA_H-elongata_contig1813.4848.1|Name=mRNA_H-elongata_contig1813.4848.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at H-elongata_contig1813:11017..14722+ (Himanthalia elongata Himel1 dioecious)back to top |