mRNA_H-elongata_contig18122.4844.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: D8LHU5_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU5_ECTSI) HSP 1 Score: 177 bits (449), Expect = 3.230e-52 Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 1
Query: 1 VSVLKRANLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEARAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLM 333
V +LKRANLS +D+AQLADAVEP+ FADGDTII EGDDDRSLFKFYIVE+GEARAYV E GEEVLMS L P GD+FGEKALVE+TPRTATV+AH LKCAALSIAGFERLM
Sbjct: 206 VEILKRANLSATDIAQLADAVEPIAFADGDTIIKEGDDDRSLFKFYIVEDGEARAYVHEDGEEVLMSHLHP-GDHFGEKALVEKTPRTATVKAHGPLKCAALSIAGFERLM 315
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A6H5KKA4_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA4_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.690e-48 Identity = 88/137 (64.23%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 85 GDTIITEGDDDRSLFKFYIVEEGEARAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLM---------------------------GPCDEILKTTYRNPADVKNGKLSPTGG 414
GDTII EGDDDRSLFKFYIVEEGEARAYV E GE+VLMS L P GD+FGEKALVE+TPRTATV+AH LKCAALSIAGFERLM GPC++IL T Y NPADVK G+ +P GG
Sbjct: 20 GDTIIKEGDDDRSLFKFYIVEEGEARAYVHEDGEDVLMSHLHP-GDHFGEKALVEKTPRTATVKAHGPLKCAALSIAGFERLMRGIVAYLVSQSLILVSAFHGSSLTTKQGPCEDILTTAYNNPADVKTGRQTPRGG 155
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A835Z5U7_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U7_9STRA) HSP 1 Score: 155 bits (393), Expect = 8.540e-44 Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 22 NLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEARAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILK----TTYRNPADVKNGKLSPTG 411
+L+ +++AQLADAVEP++FA +T+I +GD DR FKFYIVEEG+A+A++ + G +VLMS LG GDYFGEKALV+ TPRTATV+A + LKCA LSIA FERLMGPC E+LK T Y + +V G++SP G
Sbjct: 202 HLTPAEIAQLADAVEPLSFAAAETVIEQGDGDRQSFKFYIVEEGQAQAFIRKDGNDVLMSTLG-VGDYFGEKALVQMTPRTATVKAQTALKCACLSIAAFERLMGPCAELLKERASTGYNDVDEVIAGRVSPKG 334
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A835Z617_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z617_9STRA) HSP 1 Score: 140 bits (354), Expect = 7.530e-38 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 22 NLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEARAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILKTTYRNPADV 384
+L+ D+AQLADAVEP++F GDTII +GD DR FKFYI+EEGE++A++ + G +VLMS LG G+YFGEKALVE TPRTATV+A S +KCA LSIA FERLMG C ++ + DV
Sbjct: 221 HLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGE-GEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDV 340
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A1V9Z0Y3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0Y3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.910e-21 Identity = 51/125 (40.80%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 22 NLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEAR-AYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILK---TTYRNPADV 384
+L+ ++V+ +ADA++P T+A GD II + DD+ + F FYIV +G+ Y +G+ ++ +GP+G YFGEKAL E++ R +V A + ++C ++ +A FERLMGP EI + T+Y N ++V
Sbjct: 221 HLTHAEVSVIADALQPATYAAGDVIIHQDDDNYNAFHFYIVVQGDCNFVYTDSEGKSSVVGSVGPSG-YFGEKALTEKSKRAVSVVAATEVQCLSMDVATFERLMGPFQEIFERQITSYANASEV 344
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: T1FN99_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FN99_HELRO) HSP 1 Score: 96.3 bits (238), Expect = 4.760e-21 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 19 ANLSKSDVAQLADAVEPVTFADGDTIITEGD--DDRSLFKFYIVEEGEARAYVLEKG--EEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILKT---TYRNPADVKN 390
ANL + ++ +ADA+EP++F + + II +GD DD FYI+ EGEA+ ++G E+V + +LGP+ DYFGE AL+ PR ATV A S LKC L FER++GPC +ILK TY+N + + N
Sbjct: 215 ANLDEWEILTVADALEPISFQENEIIIKQGDAGDD-----FYIIVEGEAKVLQKKEGSDEQVEVGKLGPS-DYFGEIALLLSQPRAATVMATSNLKCVKLDRPRFERVLGPCSDILKRNIETYKNYSQLIN 339
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A6J2YNH8_SITOR (cAMP-dependent protein kinase type I regulatory subunit isoform X1 n=2 Tax=Curculionidae TaxID=7042 RepID=A0A6J2YNH8_SITOR) HSP 1 Score: 94.0 bits (232), Expect = 3.550e-20 Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 VSVLKRANLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEA--RAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILK 357
VS+L+ NL K + +ADA+EPV+F DG+TI+ +G+ FYI+ EG A + E GE V + RLGP+ DYFGE AL+ PR ATV A+ LKC L A FER++GPC +ILK
Sbjct: 215 VSILE--NLDKWERLTVADALEPVSFEDGETIVRQGEQGDD---FYIIVEGSATVKQKQAEGGEAVEVGRLGPS-DYFGEIALLLDRPRAATVVANGPLKCVKLDRARFERVLGPCADILK 329
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: E4WQI0_OIKDI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WQI0_OIKDI) HSP 1 Score: 88.2 bits (217), Expect = 2.360e-19 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 22 NLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEARA--YVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILKTTYRN 372
NL + + +ADA+E V F G+ ++ +GD KFY++ +G+A +V EE L+ LGP+ DYFGE AL+ PR ATV A STLKC L + FER++GPC +ILK N
Sbjct: 43 NLDEWERLTIADALEEVIFQSGEEVVKQGDQGN---KFYMIIQGQADVTQHVALDEEEKLVGTLGPS-DYFGEVALLSDRPRAATVTAKSTLKCVRLDRSRFERVLGPCVDILKRNINN 157
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: A0A161MK06_TRIIF (Camp-dependent protein kinase type i regulatory subunit isoform x2 n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MK06_TRIIF) HSP 1 Score: 86.7 bits (213), Expect = 5.860e-19 Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 1 VSVLKRANLSKSDVAQLADAVEPVTFADGDTIITEGD--DDRSLFKFYIVEEGEARAYVL--EKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILK 357
VS+L+ +L K + +ADA+EPV+F D +TI+ +G+ DD FYI+ EG A E GE + + +LGP+ DYFGE AL+ PR ATV A LKC L A FER++GPC +ILK
Sbjct: 19 VSILE--SLDKWERLTVADALEPVSFTDSETIVKQGEPGDD-----FYIIVEGTALVLQCRGEGGEPIEVGKLGPS-DYFGEIALLLDRPRAATVVAKGPLKCVKLDRARFERVLGPCADILK 133
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Match: B3RUK5_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RUK5_TRIAD) HSP 1 Score: 90.1 bits (222), Expect = 1.130e-18 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 4 SVLKRANLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEGEARAYVLEKGEEVLMSRLGPAGDYFGEKALVERTPRTATVRAHSTLKCAALSIAGFERLMGPCDEILK---TTYRNPAD 381
SV + L + LADA+E F D D II +GDD + FY VE+G+ R + + EE ++RLG GDYFGE ALV + R A+V A AAL + FERL+GPC EILK T Y++ AD
Sbjct: 232 SVEMLSELEAYERTNLADALESKKFKDNDVIIKQGDDADA---FYFVEKGQCRVIIQKGSEEKEVARLGK-GDYFGELALVTHSKRAASVYAVGDTSIAALEVGAFERLLGPCMEILKRNMTKYQDVAD 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18122.4844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18122.4844.1 >prot_H-elongata_contig18122.4844.1 ID=prot_H-elongata_contig18122.4844.1|Name=mRNA_H-elongata_contig18122.4844.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp VSVLKRANLSKSDVAQLADAVEPVTFADGDTIITEGDDDRSLFKFYIVEEback to top mRNA from alignment at H-elongata_contig18122:4833..6976- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18122.4844.1 ID=mRNA_H-elongata_contig18122.4844.1|Name=mRNA_H-elongata_contig18122.4844.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2144bp|location=Sequence derived from alignment at H-elongata_contig18122:4833..6976- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18122:4833..6976- >mRNA_H-elongata_contig18122.4844.1 ID=mRNA_H-elongata_contig18122.4844.1|Name=mRNA_H-elongata_contig18122.4844.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig18122:4833..6976- (Himanthalia elongata Himel1 dioecious)back to top |