mRNA_H-elongata_contig181006.4833.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig181006.4833.1
Unique NamemRNA_H-elongata_contig181006.4833.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A6H5KWD1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD1_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.870e-25
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:    4 SVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            S+D+LKKN  FV+LRDHFE+TYGD  S RFLEAQRNFVNS+AAYSLA YVLQIKDRHNGN+
Sbjct: 1635 SIDALKKNAGFVTLRDHFERTYGDPASSRFLEAQRNFVNSLAAYSLASYVLQIKDRHNGNI 1695
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BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: D7G1H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H8_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.190e-23
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1 
Query:    4 SVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            S+D+LKKN   V+LRDHFE+TYG+  S RFLEAQRNFVNS+AAYSLA YVLQIKDRHNGN+
Sbjct: 1417 SIDALKKNTGVVTLRDHFERTYGEPASSRFLEAQRNFVNSLAAYSLASYVLQIKDRHNGNI 1477
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BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A4W5LDX4_9TELE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5LDX4_9TELE)

HSP 1 Score: 90.1 bits (222), Expect = 6.990e-21
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 1 
Query:    1 RSVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            +S+D+LKK  N+ SLR HFE+TYGD +S  F  AQRNFV S+AAYSL C++LQIKDRHNGN+
Sbjct:   41 QSLDALKKQKNYKSLRVHFERTYGDPSSVGFRTAQRNFVQSLAAYSLVCFILQIKDRHNGNI 102
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BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A067CBP8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBP8_SAPPC)

HSP 1 Score: 90.1 bits (222), Expect = 1.350e-19
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 1 
Query:    1 RSVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            +S+D+LKK  N+ SLR HFE+TYGD +S  F  AQRNFV S+AAYSL C++LQIKDRHNGN+
Sbjct:  580 QSLDALKKQKNYKSLRVHFERTYGDPSSVGFRTAQRNFVQSLAAYSLVCFILQIKDRHNGNI 641
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BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: F0WM94_9STRA (Phosphatidyl inositol kinase (PIKG1) putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM94_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.850e-19
Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:    4 SVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            S+D LKK   + SL  HFEK+YG+VTS RFL+A++NF+ S+A YS+ CY+LQIKDRHNGN+
Sbjct:  927 SLDGLKKREGYTSLLHHFEKSYGNVTSSRFLQARKNFIESLAGYSIVCYLLQIKDRHNGNI 987
[Close]
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A1V9YMM1_9STRA (Phosphatidylinositol kinase (PIK-H2) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMM1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.510e-19
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1 
Query:    1 RSVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            +S+D+LKK+  + SLR HFE+TYGD  S  F  AQRNFV S+AAYSL CY+LQIKDRHNGN+
Sbjct:  568 QSLDALKKHKEYKSLRAHFERTYGDPGSTGFRTAQRNFVQSLAAYSLVCYILQIKDRHNGNI 629
[Close]
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A1V9YTD1_9STRA (Phosphatidylinositol kinase (PIK-H2) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTD1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.730e-19
Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 1 
Query:    1 RSVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            +S+D+LKK  ++ SLR HFE+TYGD TS  F  AQRNF++S+AAYSL  Y+LQIKDRHNGN+
Sbjct:  581 QSLDALKKRKDYKSLRIHFERTYGDPTSNSFRTAQRNFLHSLAAYSLVSYILQIKDRHNGNI 642
[Close]
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: M2XFY2_GALSU (Phosphatidylinositol 4-kinase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XFY2_GALSU)

HSP 1 Score: 85.9 bits (211), Expect = 4.160e-18
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    4 SVDSLKKN-PNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            S+ +LKK  PNFV+L D+FE+ YG   SKRF  AQRNFV S+A YSL CY+LQIKDRHNGN+
Sbjct:  763 SLHALKKRTPNFVTLLDYFERVYGGKDSKRFRRAQRNFVESMAGYSLVCYLLQIKDRHNGNI 824
[Close]
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A3M6VR83_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR83_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.160e-18
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:    4 SVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            S+D LKK   +VSL  HFEK+YG   S+RF EAQR F+ S+A YSL CY LQIKDRHNGN+
Sbjct:  873 SLDGLKKREGYVSLLHHFEKSYGPPDSRRFKEAQRKFIRSMAGYSLVCYFLQIKDRHNGNI 933
[Close]
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Match: A0A2P6NGB3_9EUKA (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NGB3_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 5.660e-18
Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 1 
Query:    4 SVDSLKKN-PNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACYVLQIKDRHNGNV 186
            SVDSLKK  PN  SL D F   YG+ TS RF+EAQRNFV S+AAYSL  Y+LQIKDRHNGN+
Sbjct:  546 SVDSLKKRIPNMKSLEDFFLSVYGEKTSMRFMEAQRNFVESLAAYSLVTYLLQIKDRHNGNI 607
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181006.4833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWD1_9PHAE3.870e-2580.33PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
D7G1H8_ECTSI1.190e-2377.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4W5LDX4_9TELE6.990e-2166.13PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A067CBP8_SAPPC1.350e-1966.13Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
F0WM94_9STRA1.850e-1962.30Phosphatidyl inositol kinase (PIKG1) putative n=1 ... [more]
A0A1V9YMM1_9STRA2.510e-1966.13Phosphatidylinositol kinase (PIK-H2) n=1 Tax=Achly... [more]
A0A1V9YTD1_9STRA8.730e-1964.52Phosphatidylinositol kinase (PIK-H2) n=1 Tax=Thrau... [more]
M2XFY2_GALSU4.160e-1866.13Phosphatidylinositol 4-kinase n=1 Tax=Galdieria su... [more]
A0A3M6VR83_9STRA4.160e-1863.93Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A2P6NGB3_9EUKA5.660e-1869.35PI3K/PI4K catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181006contigH-elongata_contig181006:676..861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.8
Seed ortholog evalue5.8e-20
Seed eggNOG ortholog2880.D7G1H8
Preferred namePI4KB
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010259,GO:0010604,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036211,GO:0036213,GO:0042176,GO:0042710,GO:0043062,GO:0043063,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0045732,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048518,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060255,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0070647,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0080090,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901564,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759,KOG1818@1,KOG1818@2759
EC2.7.1.67
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size186
Cds size186
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930043.6930182-CDS-H-elongata_contig181006:675..8611622930043.6930182-CDS-H-elongata_contig181006:675..861Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig181006 676..861 +
1691679258.9402468-CDS-H-elongata_contig181006:675..8611691679258.9402468-CDS-H-elongata_contig181006:675..861Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig181006 676..861 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181006.4833.1prot_H-elongata_contig181006.4833.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig181006 676..861 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig181006.4833.1

>prot_H-elongata_contig181006.4833.1 ID=prot_H-elongata_contig181006.4833.1|Name=mRNA_H-elongata_contig181006.4833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
RSVDSLKKNPNFVSLRDHFEKTYGDVTSKRFLEAQRNFVNSVAAYSLACY
VLQIKDRHNGNV
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mRNA from alignment at H-elongata_contig181006:676..861+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig181006.4833.1 ID=mRNA_H-elongata_contig181006.4833.1|Name=mRNA_H-elongata_contig181006.4833.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=186bp|location=Sequence derived from alignment at H-elongata_contig181006:676..861+ (Himanthalia elongata Himel1 dioecious)
CGCAGCGTCGACTCACTCAAGAAGAACCCCAACTTCGTGAGCCTGCGAGA
TCACTTCGAGAAGACATACGGGGACGTGACTTCGAAGCGGTTCCTTGAGG
CGCAGCGTAACTTCGTGAACAGCGTGGCTGCGTACTCGCTCGCGTGCTAC
GTGCTACAAATCAAAGACAGGCACAACGGTAACGTG
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Coding sequence (CDS) from alignment at H-elongata_contig181006:676..861+

>mRNA_H-elongata_contig181006.4833.1 ID=mRNA_H-elongata_contig181006.4833.1|Name=mRNA_H-elongata_contig181006.4833.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=372bp|location=Sequence derived from alignment at H-elongata_contig181006:676..861+ (Himanthalia elongata Himel1 dioecious)
CGCAGCGTCGACTCACTCAAGAAGAACCCCAACTTCGTGAGCCTGCGAGA
TCACTTCGAGAAGACATACGGGGACGTGACTTCGAAGCGGTTCCTTGAGG
CGCAGCGTAACTTCGTGAACAGCGTGGCTGCGTACTCGCTCGCGTGCTAC
GTGCTACAAATCAAAGACAGGCACAACGGTAACGTGCGCAGCGTCGACTC
ACTCAAGAAGAACCCCAACTTCGTGAGCCTGCGAGATCACTTCGAGAAGA
CATACGGGGACGTGACTTCGAAGCGGTTCCTTGAGGCGCAGCGTAACTTC
GTGAACAGCGTGGCTGCGTACTCGCTCGCGTGCTACGTGCTACAAATCAA
AGACAGGCACAACGGTAACGTG
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