mRNA_H-elongata_contig17997.4786.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 7.070e-157 Identity = 283/648 (43.67%), Postives = 386/648 (59.57%), Query Frame = 1
Query: 31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS-----LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKD--SSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRGI 1947
F +N A V GGAV++S G GP+F N++F NSA VGG V + G G S ++ +F+ C F+GN+A TGGAI+ A G YFV T G AS+ SC EN S + A+ +G+ +N SF +NG+DC G FL A D F VC GC C C P +PTC +EHS G TLETL IQ GYWRAT T V ACY+ +AC GGVTG+ YC GY PYC++C+E Y + FTC C D+A I +AA VV L + A ++++S ER G I RV +P+ S+KI+ +WQI+TQFT +A++ YP +YQ L L+ FNFD + MLS C+V VDFH R L+ T+GPI L+L+ TY R H + E ++ R KHV +L + F VYSS S+ + + F C L+DGK YLL DY I+CD+ +H+ +AG +L+Y GIP ++FLLF++R VL + +D S S SDLWKPYKP FYYEVVE +RR+ L V++ +S+AQ+++ L++AF F +I+E LAPY S WD I+R+GH VV SM ALLLKVD + + +S VFE VL+ HV+M+++ +AE + +
Sbjct: 946 FTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRL-AGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRD--TLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLAL 1590
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 478 bits (1231), Expect = 9.800e-149 Identity = 279/644 (43.32%), Postives = 378/644 (58.70%), Query Frame = 1
Query: 22 NCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGT-----SLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAE 1929
N +FI N A V GGAV++S TG GP FT + F+ NSA VGG V G G + +FD C FI N+A TGGAI+ A G FV + G ASL +C +NIS A+ +GS L ++N +F N +DCD GM+L A G+ + C GC+ C+ C P PTC MEH GT VTLE L ++ GYWRA+ S V ACYN +AC GGVTG YC GY PYC+VC++ Y L F CT+C A I +AAV VV L VAFA ++ S S + AR+ +P+ S+KI I +WQILTQFT++A++ YP +Y+ L LD FNFD + +LS C+ +DFH R L TV P+ +L L TY + E +++ +KHVS +L + FL+YSS S+ + + F C L+DG YL DYTIDCD+ +H+ +AG ++VY VGIP +AFLLF++R VL D + RE+ + S SDLWKPYKP FYYEV+E RR+ L V++ ++AAQ+++ L++AF F +++E LAP+ S WDA ++R GH VVF SM ALLLKVD + + S V+E+VL+ H MIL + E
Sbjct: 589 NVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRL-AGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPVP-PTCTDVMEHITSAGGT--VTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTE 1228
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 3.010e-146 Identity = 268/649 (41.29%), Postives = 372/649 (57.32%), Query Frame = 1
Query: 22 NCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL-DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRGI 1947
N F+ N A V GGA+++S T GP+F N S + NSA VGG + + G GTS + + +F+ C F N+A TGGA++ A G FV + G A + +C EN+S A+ +G + N SF N Y C GMFL G + +C GC +CE C+ +P +P C +EHS GT VTL+ L+I+PGYWRAT S V CYN +AC GGVTGS YC GY PYC+VC+ Y LG C+KC D A SI + +V L A ++ S E G + + R +P+ S+KI I +WQILTQFT++A+I +P +YQ L L+ FNFD +LS C+ VDFH R L+ T+ PI +L L A Y R S E ++ KHVS +L + FLVY+S S+++ Q F C LDD K YL DY I+CD+ +H +AG I++Y VGIP + LF++ VL D+ RE+ + + +DLWKPY+P FYYEV+E +RR+ L V++ ++AAQ+++AL++A VFA+I+E LAPY S WD + R+GHAVV SM ALLLKVD +D+ +S VFE +L+ HV M+ + + E M I
Sbjct: 310 NTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRL-AGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGT--VTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAI 955
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 3.430e-144 Identity = 264/646 (40.87%), Postives = 379/646 (58.67%), Query Frame = 1
Query: 28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVL-LDKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRG 1944
+F+ N A + GGAVY+S T GP+F++ F NSA VGG V G G G+ + +F C F N+A TGGA++ A+G F T G ASL +C EN+S A+ +G ++ N +F N ++C FL T+ GD C GC C+ C +P +P C + HS G +VTLETL I PGYWRATN ST V ACYN +AC GG+TG+ +YC GY PYC++C+++Y LGFTC+KCP+ A I +A V+ LF A +++ T + + LP+ +LKI + +WQI+TQFT+ A++ YP +YQ L LD FNFD + +LS C++ +DFH R L+ T+GPI +L L ATY +R + + +++ D+HVS +L ++FLVYS SS+V Q F C L+ G YL DY I+CD+ +H+ +AG IL+YPVGIP F+ LL ++R VL D + RE V SIS+LW+PY+P +YYEV+E RR+ L +++ ++AAQ+++ L++ VFA+++E L PY WD +SR+ HAVVF S+ ALLLKVD +++ +S VFE VL+ H MIL + E + G
Sbjct: 355 SFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRL-AGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGG--LVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLG 994
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 470 bits (1210), Expect = 6.930e-144 Identity = 271/644 (42.08%), Postives = 378/644 (58.70%), Query Frame = 1
Query: 28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDH-AWSITVAAVATVVSLFVAFAAFTHLTSPE-RLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRG 1944
+F+ N AGV G A+++S+ GP F + I G GT G + +FD C FIGN+A TGGAI A G + G A + +C EN S A+ +G + N SF NG+DC G F T D F +C GC+ C+ C + S P C M+HS G VTL+TL I G+WRA+ ST V ACY+ +AC GGVTG+ YC+ GY PYC +C++ Y + L F C+KC ++ A I VA V ++ +F+A A +++TS E +G I V +P+ SLKI I SWQILTQFT++A++ YP +YQ LL VLD FNFD + +LS C+V ++FH R L+ T+ PI +L+L TY R + E + I +KHV+ +L + F VYSS SS + + F C LD K YL DY+I+C++ HR + +AG I++Y VGIP +A LLFK+R VL D++ RE+ V SIS+LW+PYKP FYYEV+E RR+ L V++ ++AAQ+++ L++AF FA+++E LAPY S WD ISR+GH VVF SM ALLLKVD +D+ +S +VFE VL+ +HV MIL + EA ++
Sbjct: 849 SFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDA-IENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGN--VTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQA 1489
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 4.400e-137 Identity = 261/612 (42.65%), Postives = 353/612 (57.68%), Query Frame = 1
Query: 28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS-----LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDDCEYCTV-GKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKH-GTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKD--SSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLK 1833
+FI+N A V GGAV++S+ G G +F +SF+ NSA +GG V G G S ++ +FD C F+GN+A TGGAI+ A G +FV T G AS+ +C EN S A+ +G + +F NG+DC GMFL D F VC GC +P +P C +EHS P G +TLE L IQ GYWRAT S V ACY+ AC GGVTG+ YC GY PYC+VC+ + GFTC +C D A I +A V +F A +++TS +R G I RV +P+ S+KI+ +WQ++TQFT +A+I YP +YQT L L FNFD +LS C+ VDFH R L+ T+GPI +++L TY TR H G ++ ++ DKHV +L + F VYSS SS + + F C L DGK YL DY I+CD+ RH+ +AG+ +LVY VGIP + FLL+++R L +++ ++ S V S SDLWKPY+P FYYEV+E RR+ L V++ +S AQ+++ LV+AFVF +I+E L+PY S WD ISR GH VV SM ALLLK
Sbjct: 754 SFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRL-AGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGK--LTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 9.670e-137 Identity = 261/654 (39.91%), Postives = 369/654 (56.42%), Query Frame = 1
Query: 28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS---LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGD-RFAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL-DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEA-TMRGIH*KRRR 1965
+F N AG GGAV++S G GP+F++ SF+ N A VGG + G G L + FD C FI N A +GGA++ A G V G +S A+ +G M N SF NG+ C +FL A + F VC GC C+ C+ +P +PTC M+H G VTLETL I PGYWRAT+ S + CYN +AC GGVTG+ YC Y PYCS+C++ Y LG++C+KC + I A V++LFVA ++ S E + R+ +P+ S+KI I SWQILTQF + A+++YP +YQ L L F FD ++S C++ + FH R L T+GPI +L+L TY TR + + E ++I DKHV L + FLVYSS SS + + F C L+DGK YL DY I+CD+ +H+V +AG IL+YP+GIP+ ++ LLFK+R VL DK R+ + V S S+LW+PYKP FYYEV+E RR+ L +++ ++AAQ+++ L++AF FA+++E ++PY S W+ ++R+GH VV SM ALLLKVD +D+ S VFE VL+ +H MIL + E + G+ +R R
Sbjct: 762 SFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQD-IVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGK--VTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLR 1412
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 452 bits (1162), Expect = 9.860e-135 Identity = 276/647 (42.66%), Postives = 376/647 (58.11%), Query Frame = 1
Query: 31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGT-----SLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCD---DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHR-LPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATM 1938
F N A V GGAV++S GP ++ F N A VGG V G G L F C F+ N+A TGGA+E A G FV XXXXX G A+L +C EN+S+ A+ +GS KM N S+R N + C GMFL A GD C GC D + C +P +P C + MEH+ GT+ +TL L + G+WRAT + V CYN NAC GVT S C +GY PYCS+C++ Y GL F C++C D A I +A+ VV+L VA A +++ S +++G S T L R +P+ S KI+ SWQILTQFT +A++ YP +YQ L L FNFD + +LS C+V VDFH R LI T+GPI +L L TY TR + + E +++ ++HVS +L + VYSS SS + Q F C L DG+ YL DY I CD+ +H+ L +AG+ ++VY VGIP + LLF++R VL RE+ + V+S S+LWKPYKP FYYEV+E RR+ L V++ ++A Q+++ L++AF F +++E LAPY S WD +SR+GHAVVF SM ALLLKVD +++ S VFEVVL+ H MIL+ + E +
Sbjct: 1401 FSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFV-DCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-FEEPPLVPICALAMEHTGSAGGTNNITL--LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVS-DKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVV 2042
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 1.660e-134 Identity = 270/644 (41.93%), Postives = 369/644 (57.30%), Query Frame = 1
Query: 31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCS-FRSNGYDCDHGMFLPATAVGDRFAVVCFGC--DDCEYCTVGKPSD-IPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIITS-WQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL--DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAE 1929
F N AG GGAV +S GP F +F N A GG V+ G +G + C+F N+A TGGAIE A G F GG+A L +C +N ++ D PA+ LG L ++ S F N C++GM+L + GDR+ VC GC ++ ++ + D +P CV++++H+ G + T+ETL + GYWRATN S V ACYN++AC GG+T P +C GY PYCSVC+E Y L FTCT+C D I + V V L A A HL S E G + RV+ RLP+ S+KI+ WQILTQF+++A++ YP +YQ L ++ NFD + S C+V VDFH R L+ T+GP+ + +L TYT R+ SE ++ R KH+S +L I FLVYSS S+ V Q F C LDD K YL DY I+CD+ H+ +AG+ ILVYPVGIPLF+ +LL+K+R VL D R+ V ISDLW PYKP RFYYEV+E RR+ L V++ ++AAQV++ L++AF F + + +LAPY S WDA IS +GH +VF SM ALL KVD +D+ S +VF VL+ H M++ + E
Sbjct: 1112 FESNTAGA-GGAVMLSGVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYD-FAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAE-DEGPAVSNLGV-LDLEGTSRFSGNVLSCENGMYLDSVD-GDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDT--TIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVE 1748
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 2.570e-132 Identity = 258/648 (39.81%), Postives = 368/648 (56.79%), Query Frame = 1
Query: 16 NNNCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGKMS-ASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDR-FAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPD-HAWSITVAAVATVVSLFVAFAAFTHLTSPER-LGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKDSS-VVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATM 1938
N + +F+ N AGV GGA+++S GP FT +F N A +GG V + G G G + +FD C F+ N+ TGGAIE A G F + GAA ++C N + A+ +G +++ F N +DC M+L D F V+C GC+ CE C + +P C MEH+ G +TLE L I GYWRAT S V ACY+ AC GGVT + YC GY PYCSVC+ Y + LGF C+KCP+ + I + V V + V A ++++TS E +GT RV +P+ S+KI I +WQILTQFT++A++ YP +Y+ L VLD FNFD LSV+C + +DFH R L+ T+ PI+ +L L TY + + + + KH S +L + F VYSS SSI+ + F C L D KIYL DY I+CD+ +H+ +A ILVY VGIP +A LLF++R +L + +D V SI+DLW+PY FYYEV+E RR+ L V++ ++AAQ+++ L++AF F +++E L PY+S WD I+R+GH VVF SM LLLKV+ +D++ AS VFE+VL+ +H LM++ + E +
Sbjct: 954 NVDISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRL-AGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGN--ITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVV 1598 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17997.4786.1 >prot_H-elongata_contig17997.4786.1 ID=prot_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=589bp MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATLFKGNIAWSGGGALRIback to top mRNA from alignment at H-elongata_contig17997:2626..6214+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17997.4786.1 ID=mRNA_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3589bp|location=Sequence derived from alignment at H-elongata_contig17997:2626..6214+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17997:2626..6214+ >mRNA_H-elongata_contig17997.4786.1 ID=mRNA_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3534bp|location=Sequence derived from alignment at H-elongata_contig17997:2626..6214+ (Himanthalia elongata Himel1 dioecious)back to top |