mRNA_H-elongata_contig17997.4786.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17997.4786.1
Unique NamemRNA_H-elongata_contig17997.4786.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 7.070e-157
Identity = 283/648 (43.67%), Postives = 386/648 (59.57%), Query Frame = 1
Query:   31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS-----LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKD--SSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRGI 1947
            F +N A V GGAV++S  G GP+F N++F  NSA VGG V + G G S     ++     +F+ C F+GN+A  TGGAI+ A G  YFV T                 G AS+ SC   EN S  +   A+  +G+    +N SF +NG+DC  G FL   A  D F  VC GC   C  C    P  +PTC   +EHS    G    TLETL IQ GYWRAT   T V ACY+ +AC GGVTG+  YC  GY  PYC++C+E Y   + FTC  C D+A  I +AA   VV L +  A  ++++S ER G    I  RV   +P+ S+KI+  +WQI+TQFT +A++ YP +YQ  L  L+ FNFD + MLS  C+V VDFH R L+ T+GPI   L+L+ TY    R H  + E ++  R KHV  +L + F VYSS S+ + + F C  L+DGK YLL DY I+CD+ +H+    +AG  +L+Y  GIP  ++FLLF++R VL  +    +D  S   S SDLWKPYKP  FYYEVVE +RR+ L  V++    +S+AQ+++ L++AF F +I+E LAPY S WD  I+R+GH VV  SM  ALLLKVD + +  +S  VFE VL+  HV+M+++ +AE  +  +
Sbjct:  946 FTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRL-AGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRD--TLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLAL 1590          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 9.800e-149
Identity = 279/644 (43.32%), Postives = 378/644 (58.70%), Query Frame = 1
Query:   22 NCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGT-----SLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAE 1929
            N +FI N A V GGAV++S TG GP FT + F+ NSA VGG V   G G       +      +FD C FI N+A  TGGAI+ A G   FV +                 G ASL +C   +NIS      A+  +GS L ++N +F  N +DCD GM+L   A G+ +   C GC+  C+ C    P   PTC   MEH     GT  VTLE L ++ GYWRA+  S  V ACYN +AC GGVTG   YC  GY  PYC+VC++ Y   L F CT+C   A  I +AAV  VV L VAFA  ++  S       S + AR+   +P+ S+KI I +WQILTQFT++A++ YP +Y+  L  LD FNFD + +LS  C+  +DFH R L  TV P+  +L L  TY      +    E +++  +KHVS +L + FL+YSS S+ + + F C  L+DG  YL  DYTIDCD+ +H+    +AG  ++VY VGIP  +AFLLF++R VL D +  RE+ +   S SDLWKPYKP  FYYEV+E  RR+ L  V++    ++AAQ+++ L++AF F +++E LAP+ S WDA ++R GH VVF SM  ALLLKVD + +   S  V+E+VL+  H  MIL  + E
Sbjct:  589 NVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRL-AGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPVP-PTCTDVMEHITSAGGT--VTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTE 1228          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 3.010e-146
Identity = 268/649 (41.29%), Postives = 372/649 (57.32%), Query Frame = 1
Query:   22 NCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL-DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRGI 1947
            N  F+ N A V GGA+++S T  GP+F N S + NSA VGG + + G GTS + +       +F+ C F  N+A  TGGA++ A G   FV +                 G A + +C   EN+S      A+  +G    + N SF  N Y C  GMFL     G  +  +C GC  +CE C+  +P  +P C   +EHS    GT  VTL+ L+I+PGYWRAT  S  V  CYN +AC GGVTGS  YC  GY  PYC+VC+  Y   LG  C+KC D A SI +    +V  L    A  ++  S E  G +  +  R    +P+ S+KI I +WQILTQFT++A+I +P +YQ  L  L+ FNFD   +LS  C+  VDFH R L+ T+ PI  +L L A Y    R    S E ++    KHVS +L + FLVY+S S+++ Q F C  LDD K YL  DY I+CD+ +H     +AG  I++Y VGIP  +   LF++  VL  D+  RE+ + +   +DLWKPY+P  FYYEV+E +RR+ L  V++    ++AAQ+++AL++A VFA+I+E LAPY S WD  + R+GHAVV  SM  ALLLKVD +D+  +S  VFE +L+  HV M+ + + E  M  I
Sbjct:  310 NTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRL-AGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGT--VTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAI 955          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 3.430e-144
Identity = 264/646 (40.87%), Postives = 379/646 (58.67%), Query Frame = 1
Query:   28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVL-LDKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRG 1944
            +F+ N A + GGAVY+S T  GP+F++  F  NSA VGG V   G G    G+    +  +F  C F  N+A  TGGA++ A+G   F  T                 G ASL +C   EN+S      A+  +G   ++ N +F  N ++C    FL  T+ GD     C GC   C+ C   +P  +P C   + HS    G  +VTLETL I PGYWRATN ST V ACYN +AC GG+TG+ +YC  GY  PYC++C+++Y   LGFTC+KCP+ A  I +A    V+ LF   A  +++       T   +   +   LP+ +LKI + +WQI+TQFT+ A++ YP +YQ  L  LD FNFD + +LS  C++ +DFH R L+ T+GPI  +L L ATY   +R +  +   +++  D+HVS +L ++FLVYS  SS+V Q F C  L+ G  YL  DY I+CD+ +H+    +AG  IL+YPVGIP F+  LL ++R VL  D + RE    V SIS+LW+PY+P  +YYEV+E  RR+ L  +++    ++AAQ+++ L++  VFA+++E L PY   WD  +SR+ HAVVF S+  ALLLKVD +++  +S  VFE VL+  H  MIL  + E  + G
Sbjct:  355 SFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRL-AGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGG--LVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLG 994          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 470 bits (1210), Expect = 6.930e-144
Identity = 271/644 (42.08%), Postives = 378/644 (58.70%), Query Frame = 1
Query:   28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDD-CEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDH-AWSITVAAVATVVSLFVAFAAFTHLTSPE-RLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATMRG 1944
            +F+ N AGV G A+++S+   GP F               + I G GT   G +  +FD C FIGN+A  TGGAI  A G    +                   G A + +C   EN S      A+  +G    + N SF  NG+DC  G F   T   D F  +C GC+  C+ C   + S  P C   M+HS    G   VTL+TL I  G+WRA+  ST V ACY+ +AC GGVTG+  YC+ GY  PYC +C++ Y + L F C+KC ++ A  I VA V  ++ +F+A A  +++TS E  +G    I   V   +P+ SLKI I SWQILTQFT++A++ YP +YQ LL VLD FNFD + +LS  C+V ++FH R L+ T+ PI  +L+L  TY    R +    E + I  +KHV+ +L + F VYSS SS + + F C  LD  K YL  DY+I+C++  HR +  +AG  I++Y VGIP  +A LLFK+R VL D++  RE+   V SIS+LW+PYKP  FYYEV+E  RR+ L  V++    ++AAQ+++ L++AF FA+++E LAPY S WD  ISR+GH VVF SM  ALLLKVD +D+  +S +VFE VL+ +HV MIL  + EA ++ 
Sbjct:  849 SFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDA-IENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGN--VTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQA 1489          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 4.400e-137
Identity = 261/612 (42.65%), Postives = 353/612 (57.68%), Query Frame = 1
Query:   28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS-----LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCDDCEYCTV-GKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKH-GTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKD--SSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLK 1833
            +FI+N A V GGAV++S+ G G +F  +SF+ NSA +GG V   G G S     ++     +FD C F+GN+A  TGGAI+ A G  +FV T                 G AS+ +C   EN S      A+  +G     +  +F  NG+DC  GMFL      D F  VC GC          +P  +P C   +EHS  P G   +TLE L IQ GYWRAT  S  V ACY+  AC GGVTG+  YC  GY  PYC+VC+  +    GFTC +C D A  I +A    V  +F A    +++TS +R G    I  RV   +P+ S+KI+  +WQ++TQFT +A+I YP +YQT L  L  FNFD   +LS  C+  VDFH R L+ T+GPI  +++L  TY   TR H G ++  ++   DKHV  +L + F VYSS SS + + F C  L DGK YL  DY I+CD+ RH+    +AG+ +LVY VGIP  + FLL+++R  L +++  ++   S V S SDLWKPY+P  FYYEV+E  RR+ L  V++    +S AQ+++ LV+AFVF +I+E L+PY S WD  ISR GH VV  SM  ALLLK
Sbjct:  754 SFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRL-AGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGK--LTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 449 bits (1156), Expect = 9.670e-137
Identity = 261/654 (39.91%), Postives = 369/654 (56.42%), Query Frame = 1
Query:   28 AFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTS---LDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGD-RFAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL-DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEA-TMRGIH*KRRR 1965
            +F  N AG  GGAV++S  G GP+F++ SF+ N A VGG   + G G     L   +   FD C FI N A  +GGA++ A G    V                   G            +S      A+  +G    M N SF  NG+ C   +FL   A  +  F  VC GC   C+ C+  +P  +PTC   M+H     G   VTLETL I PGYWRAT+ S  +  CYN +AC GGVTG+  YC   Y  PYCS+C++ Y   LG++C+KC   +  I  A    V++LFVA     ++ S E       +  R+   +P+ S+KI I SWQILTQF + A+++YP +YQ  L  L  F FD   ++S  C++ + FH R L  T+GPI  +L+L  TY   TR +  + E ++I  DKHV   L + FLVYSS SS + + F C  L+DGK YL  DY I+CD+ +H+V   +AG  IL+YP+GIP+ ++ LLFK+R VL  DK  R+  + V S S+LW+PYKP  FYYEV+E  RR+ L  +++    ++AAQ+++ L++AF FA+++E ++PY S W+  ++R+GH VV  SM  ALLLKVD +D+   S  VFE VL+ +H  MIL  + E   + G+  +R R
Sbjct:  762 SFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQD-IVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGK--VTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLR 1412          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 9.860e-135
Identity = 276/647 (42.66%), Postives = 376/647 (58.11%), Query Frame = 1
Query:   31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGT-----SLDGKMSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDRFAVVCFGCD---DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHR-LPIHSLKIIT-SWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNL-REKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATM 1938
            F  N A V GGAV++S    GP  ++  F  N A VGG V   G G       L       F  C F+ N+A  TGGA+E A G   FV     XXXXX         G A+L +C   EN+S+     A+  +GS  KM N S+R N + C  GMFL   A GD     C GC    D + C   +P  +P C + MEH+    GT+ +TL  L +  G+WRAT  +  V  CYN NAC  GVT S   C +GY  PYCS+C++ Y  GL F C++C D A  I +A+   VV+L VA A  +++ S +++G  S  T   L R +P+ S KI+  SWQILTQFT +A++ YP +YQ  L  L  FNFD + +LS  C+V VDFH R LI T+GPI  +L L  TY   TR +  + E +++  ++HVS +L +   VYSS SS + Q F C  L DG+ YL  DY I CD+ +H+ L  +AG+ ++VY VGIP  +  LLF++R VL      RE+ + V+S S+LWKPYKP  FYYEV+E  RR+ L  V++    ++A Q+++ L++AF F +++E LAPY S WD  +SR+GHAVVF SM  ALLLKVD +++   S  VFEVVL+  H  MIL+ + E  +
Sbjct: 1401 FSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFV-DCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-FEEPPLVPICALAMEHTGSAGGTNNITL--LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVS-DKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVV 2042          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 1.660e-134
Identity = 270/644 (41.93%), Postives = 369/644 (57.30%), Query Frame = 1
Query:   31 FIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGK----MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCS-FRSNGYDCDHGMFLPATAVGDRFAVVCFGC--DDCEYCTVGKPSD-IPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPERLGTSSTITARVLHRLPIHSLKIITS-WQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLL--DKNLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAE 1929
            F  N AG  GGAV +S    GP F   +F  N A  GG V+    G   +G         +  C+F  N+A  TGGAIE A G   F                   GG+A L +C   +N ++ D  PA+  LG  L ++  S F  N   C++GM+L +   GDR+  VC GC  ++ ++    +  D +P CV++++H+    G +  T+ETL +  GYWRATN S  V ACYN++AC GG+T  P +C  GY  PYCSVC+E Y   L FTCT+C D    I +  V  V  L  A A   HL S E  G    +  RV+ RLP+ S+KI+   WQILTQF+++A++ YP +YQ  L  ++  NFD   + S  C+V VDFH R L+ T+GP+  + +L  TYT   R+   SE  ++  R KH+S +L I FLVYSS S+ V Q F C  LDD K YL  DY I+CD+  H+    +AG+ ILVYPVGIPLF+ +LL+K+R VL   D   R+    V  ISDLW PYKP RFYYEV+E  RR+ L  V++    ++AAQV++ L++AF F + + +LAPY S WDA IS +GH +VF SM  ALL KVD +D+   S +VF  VL+  H  M++  + E
Sbjct: 1112 FESNTAGA-GGAVMLSGVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYD-FAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAE-DEGPAVSNLGV-LDLEGTSRFSGNVLSCENGMYLDSVD-GDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDT--TIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVE 1748          
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 2.570e-132
Identity = 258/648 (39.81%), Postives = 368/648 (56.79%), Query Frame = 1
Query:   16 NNNCAFIKNKAGVWGGAVYISATGEGPSFTNSSFLFNSAHVGGGVFITGRGTSLDGKMS-ASFDGCMFIGNKAEETGGAIEIATGSAYFVATXXXXXXXXXXXXXXXXGGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMFLPATAVGDR-FAVVCFGCD-DCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVVTLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYCSVCTENYVKGLGFTCTKCPD-HAWSITVAAVATVVSLFVAFAAFTHLTSPER-LGTSSTITARVLHRLPIHSLKI-ITSWQILTQFTTLASIIYPAIYQTLLKVLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITRKHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIYLLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDKNLREKDSS-VVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAAQVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKVDATDDYQASPDVFEVVLICIHVLMILLAIAEATM 1938
            N + +F+ N AGV GGA+++S    GP FT  +F  N A +GG V + G G    G  +  +FD C F+ N+   TGGAIE A G   F  +                 GAA  ++C    N +      A+  +G    +++  F  N +DC   M+L      D  F V+C GC+  CE C   +   +P C   MEH+    G   +TLE L I  GYWRAT  S  V ACY+  AC GGVT +  YC  GY  PYCSVC+  Y + LGF C+KCP+ +   I +  V  V +  V  A ++++TS E  +GT      RV   +P+ S+KI I +WQILTQFT++A++ YP +Y+  L VLD FNFD    LSV+C + +DFH R L+ T+ PI+ +L L  TY      +    + +   + KH S +L + F VYSS SSI+ + F C  L D KIYL  DY I+CD+ +H+    +A   ILVY VGIP  +A LLF++R +L     + +D   V SI+DLW+PY    FYYEV+E  RR+ L  V++    ++AAQ+++ L++AF F +++E L PY+S WD  I+R+GH VVF SM   LLLKV+ +D++ AS  VFE+VL+ +H LM++  + E  +
Sbjct:  954 NVDISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRL-AGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGN--ITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVV 1598          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17997.4786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC0_ECTSI7.070e-15743.67Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G301_ECTSI9.800e-14943.32Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI3.010e-14641.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHH1_ECTSI3.430e-14440.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE6.930e-14442.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LIY0_ECTSI4.400e-13742.65Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI9.670e-13739.91Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G5Y7_ECTSI9.860e-13542.66Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JY65_9PHAE1.660e-13441.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI2.570e-13239.81Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17997contigH-elongata_contig17997:2626..6214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.9
Seed ortholog evalue1.7e-129
Seed eggNOG ortholog2880.D8LSC0
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size2448
Cds size1767
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17997.4786.1prot_H-elongata_contig17997.4786.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17997 2812..5719 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930038.347594-UTR-H-elongata_contig17997:2625..28111622930038.347594-UTR-H-elongata_contig17997:2625..2811Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17997 2626..2811 +
1691679256.969817-UTR-H-elongata_contig17997:2625..28111691679256.969817-UTR-H-elongata_contig17997:2625..2811Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17997 2626..2811 +
1622930038.432625-UTR-H-elongata_contig17997:5719..62141622930038.432625-UTR-H-elongata_contig17997:5719..6214Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17997 5720..6214 +
1691679257.0387561-UTR-H-elongata_contig17997:5719..62141691679257.0387561-UTR-H-elongata_contig17997:5719..6214Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17997 5720..6214 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930038.361945-CDS-H-elongata_contig17997:2811..31261622930038.361945-CDS-H-elongata_contig17997:2811..3126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 2812..3126 +
1691679256.9801493-CDS-H-elongata_contig17997:2811..31261691679256.9801493-CDS-H-elongata_contig17997:2811..3126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 2812..3126 +
1622930038.3812697-CDS-H-elongata_contig17997:3312..35921622930038.3812697-CDS-H-elongata_contig17997:3312..3592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 3313..3592 +
1691679256.9895158-CDS-H-elongata_contig17997:3312..35921691679256.9895158-CDS-H-elongata_contig17997:3312..3592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 3313..3592 +
1622930038.3978217-CDS-H-elongata_contig17997:3827..40781622930038.3978217-CDS-H-elongata_contig17997:3827..4078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 3828..4078 +
1691679257.006692-CDS-H-elongata_contig17997:3827..40781691679257.006692-CDS-H-elongata_contig17997:3827..4078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 3828..4078 +
1622930038.4148304-CDS-H-elongata_contig17997:4798..57191622930038.4148304-CDS-H-elongata_contig17997:4798..5719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 4799..5719 +
1691679257.0257614-CDS-H-elongata_contig17997:4798..57191691679257.0257614-CDS-H-elongata_contig17997:4798..5719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17997 4799..5719 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17997.4786.1

>prot_H-elongata_contig17997.4786.1 ID=prot_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=589bp
MSASFDGCMFIGNKAEETGGAIEIATGSAYFVATLFKGNIAWSGGGALRI
GGAASLYSCVLEENISKVDHYPAIIMLGSELKMQNCSFRSNGYDCDHGMF
LPATAVGDRFAVVCFGCDDCEYCTVGKPSDIPTCVMKMEHSFIPAGTSVV
TLETLIIQPGYWRATNKSTIVSACYNKNACNGGVTGSPDYCDNGYTEPYC
SVCTENYVKGLGFTCTKCPDHAWSITVAAVATVVSLFVAFAAFTHLTSPE
RLGTSSTITARVLHRLPIHSLKIITSWQILTQFTTLASIIYPAIYQTLLK
VLDNFNFDPTKMLSVACMVTVDFHWRFLIVTVGPISVILMLIATYTYITR
KHGTSEEIIKIARDKHVSSLLFILFLVYSSTSSIVLQMFTCTMLDDGKIY
LLVDYTIDCDALRHRVLMPWAGLAILVYPVGIPLFFAFLLFKNRSVLLDK
NLREKDSSVVSISDLWKPYKPMRFYYEVVEFSRRLGLIVVLMATEDDSAA
QVSLALVLAFVFAIITEMLAPYESHWDARISRLGHAVVFFSMLYALLLKV
DATDDYQASPDVFEVVLICIHVLMILLAIAEATMRGIH*
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mRNA from alignment at H-elongata_contig17997:2626..6214+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17997.4786.1 ID=mRNA_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3589bp|location=Sequence derived from alignment at H-elongata_contig17997:2626..6214+ (Himanthalia elongata Himel1 dioecious)
ATCCGTTTTAATAAAAACAACAATTGTGCCTTCATCAAGAATAAAGCGGG GGTGTGGGGGGGAGCGGTTTATATCTCGGCTACAGGTGAAGGCCCTAGTT TCACCAATTCGAGTTTTCTGTTCAATTCTGCCCATGTCGGTGGCGGCGTA TTTATTACTGGACGCGGAACGTCTCTCGACGGCAAAATGTCAGCCTCGTT TGATGGATGCATGTTTATCGGCAACAAGGCAGAGGAGACTGGCGGGGCCA TCGAAATTGCAACTGGCTCGGCTTACTTCGTGGCGACGTTGTTCAAAGGC AACATTGCTTGGTCGGGGGGAGGAGCTCTACGGATAGGTGGCGCGGCGAG CCTGTATTCGTGCGTATTAGAGGAGAATATTTCGAAGGTGGACCACTATC CGGCGATAATTATGCTTGGGAGCGAGCTAAAAATGCAAAACTGCTCATTT CGCAGCAACGGGTACGATTGTGACCACGGGATGTTTCTTCCCGCGACAGC GGTGAGCTTCTATTTCAGTCAGTACGAATTTGGTATACTATGGAACCATC ACCGGTCGTTGGTGGTGTTTTGTATGAAATTTCGAACGAGGGGAGAAAAA TTGGGACCTCACATGAATATTCGATATAATAAGTGTTAAACCTCAAGAGA TAATGTGCTTCTTTCATCATTTTATGTTATATTGCAGGTGGGGGACAGGT TTGCAGTGGTCTGTTTCGGATGCGACGACTGCGAATATTGCACAGTCGGG AAGCCGTCGGATATCCCGACATGCGTGATGAAGATGGAGCATTCATTTAT ACCCGCTGGAACGAGTGTTGTAACGCTCGAGACGCTTATAATTCAGCCCG GGTATTGGCGGGCAACTAACAAAAGCACCATCGTCTCGGCCTGCTACAAT AAAAATGCATGCAATGGAGGGGTGACGGGCTCTCCTGACTACTGCGATAA CGGCTACACTGAACCATGTAGGTTGGCGCGTAGTGTTCACACTCTTTCTT CGTAGCGTAGTGATCTTGGTGGTTGTAAAATGTCCGTCAACCACCGGGAC GCAAAATATTGTGTGGAACCTCTCCTACATCAGGGAAACTTTCGTATATA GCTATCCGTCTGCTCCCTTTGCCCATTTATTTTGACTATTTTCCGCAATA AACGTAAAGCAAACTGGAACTCCAACCCATGCATATTTCCGGGGGGGGGA AGATTGTTCGGTCTGCACAGAGAACTACGTCAAGGGTTTAGGCTTCACCT GCACAAAGTGCCCCGACCACGCATGGAGCATAACGGTTGCTGCGGTCGCC ACCGTGGTATCCCTTTTCGTTGCTTTCGCTGCCTTCACGCATCTGACATC GCCTGAGAGGTTGGGGACGAGTAGTACGATCACAGCCCGCGTGCTCCATC GGTTGCCGATCCATTCCTTAAAGATCATCACGTCTTGGCAGATTCTAACA CAGGTGAAATAGAAACCCCCAAAAAAAACATTTAAACCACTGAGCCGATT CGTTACGATATAGCTCCGGTGAAATATGTGGAAAATGTCGTCACATATGT CTTTCCTAATGGTATTTGGTGCGTCGCTATAAATTTAAGGTGTACGCGCC GAGCGATTCTGGAAAGGCGCTGTTGCTTTGAAAACCCCTAGGAAATGGTC TGACAGTCCCGCAACCTAGTGGATCAAGTCGTTAATAGAAGCACCGATTT TTATCTTTGAGCCAGAGCTTTCGTTTGAGCAACTCCACGGGGGCGACCAT TTAAGATCGATACACTAGGCTGGTGACGTAAAGCAAGAAATTGTCATCCA TGATGAAAACCCCTATTCTTACCGTATCAACCAAACCAAGGGCTGATATG CGGGATGAATCTGTTTGTTCTTAGTTAAGTAATTATAGCTCTATGACGCT CCATTATGAGACGGGTTACCAGCAAACAAACCTTATTTGCATCTCGCGCG GTGAGGCAAAGTTTAAAATATAAAAGGGATAATTTTCTATCTAACATATC GGGATATCTTTAGCGGGATATGCACAGTCGCCGTCATGGAATTTGACACC AGACTTAGTTGTCTATAGCACGGAGCAGCACACCGGAGACCTGAGACCTA ACGCCCTACTCTAACACTGTCTGTGTGAACCCGTAAAATCTCTACCTAAT ACCGCGGGTGGTTTCTTTCGAAGTTTACTACTCTGGCCAGCATCATCTAC CCGGCAATATATCAGACCTTGCTGAAGGTTTTGGATAATTTCAATTTCGA TCCTACAAAGATGCTGTCGGTGGCATGCATGGTCACCGTGGACTTCCACT GGCGATTTTTAATTGTGACGGTTGGACCCATCTCTGTCATCCTAATGCTT ATCGCGACGTATACCTACATCACGCGAAAACATGGCACATCGGAAGAAAT TATCAAGATCGCTCGAGACAAGCATGTATCTTCTCTCCTCTTTATATTGT TCCTGGTGTACTCTAGCACCAGCTCTATAGTGTTACAGATGTTCACATGC ACCATGCTCGATGACGGAAAGATTTATCTTTTGGTAGATTACACCATTGA CTGTGACGCGCTTAGACACCGAGTTCTTATGCCCTGGGCCGGGCTCGCGA TATTGGTGTATCCAGTTGGTATACCTCTATTTTTCGCCTTTCTTCTGTTC AAAAATCGTAGTGTGCTCCTTGACAAGAATCTCCGCGAAAAAGACTCAAG CGTAGTTTCGATTTCAGATCTCTGGAAACCGTACAAGCCGATGAGGTTTT ATTACGAGGTCGTCGAGTTTAGTCGGCGACTCGGGCTAATAGTCGTGTTG ATGGCTACTGAAGACGATTCGGCCGCTCAGGTTTCCCTGGCCCTTGTGCT TGCATTCGTATTTGCTATCATAACGGAAATGTTGGCGCCGTACGAGTCGC ACTGGGACGCCCGGATAAGTCGATTGGGGCATGCGGTGGTGTTTTTCAGC ATGCTTTATGCTCTGTTATTAAAGGTTGATGCTACGGACGATTATCAAGC CAGTCCAGACGTGTTCGAGGTTGTGCTAATATGTATCCATGTTCTTATGA TTCTTCTAGCAATCGCCGAGGCGACTATGAGGGGTATACACTAAAAAAGA CGCAGGTAGATGATCCTTGGCCAAGAAAACGTCTCTACCGGTCAGACGAG TTTCGTTCTGCCTCTCGTTCAGTGAATTTCACGTCGAGGGTAGTTCCCGT CGACGAGATAGAATTATCAGTACGTACGCCACGTTGAAGAACAACATCAG GCAGTTTGAGGGCTGGTTGCGACCCCACGTTTGCCCGTTTGCTACAAATA GCAGAACAATCGGATCGGAAACTCGTATCTTCGTCCCCGAGATATCTTCT AGTACAAACGAGGTATAGCATATTATGTCCTCGGCATCCATATAATAGGC CTTAGTTAAACTCTAATATTGAAGCATCCAAAATGTATCTTTTGGTGGGA CTCGCCCGTGTCCTGTACTGTTTTAGCCATGTCTGGGCGATAAAGTTGGA CTAGGGTTGGCGACTCCCATGGAATCCAGTTTTTTTTGCTTGCACTCTAT AGCTTTATGCATTTGTATAATATATGGTGTTACTCGCGG
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Coding sequence (CDS) from alignment at H-elongata_contig17997:2626..6214+

>mRNA_H-elongata_contig17997.4786.1 ID=mRNA_H-elongata_contig17997.4786.1|Name=mRNA_H-elongata_contig17997.4786.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3534bp|location=Sequence derived from alignment at H-elongata_contig17997:2626..6214+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCCTCGTTTGATGGATGCATGTTTATCGGCAACAAGGCAGAGGA
GACTGGCGGGGCCATCGAAATTGCAACTGGCTCGGCTTACTTCGTGGCGA
CGTTGTTCAAAGGCAACATTGCTTGGTCGGGGGGAGGAGCTCTACGGATA
GGTGGCGCGGCGAGCCTGTATTCGTGCGTATTAGAGGAGAATATTTCGAA
GGTGGACCACTATCCGGCGATAATTATGCTTGGGAGCGAGCTAAAAATGC
AAAACTGCTCATTTCGCAGCAACGGGTACGATTGTGACCACGGGATGTTT
CTTCCCGCGACAGCGATGTCAGCCTCGTTTGATGGATGCATGTTTATCGG
CAACAAGGCAGAGGAGACTGGCGGGGCCATCGAAATTGCAACTGGCTCGG
CTTACTTCGTGGCGACGTTGTTCAAAGGCAACATTGCTTGGTCGGGGGGA
GGAGCTCTACGGATAGGTGGCGCGGCGAGCCTGTATTCGTGCGTATTAGA
GGAGAATATTTCGAAGGTGGACCACTATCCGGCGATAATTATGCTTGGGA
GCGAGCTAAAAATGCAAAACTGCTCATTTCGCAGCAACGGGTACGATTGT
GACCACGGGATGTTTCTTCCCGCGACAGCGGTGGGGGACAGGTTTGCAGT
GGTCTGTTTCGGATGCGACGACTGCGAATATTGCACAGTCGGGAAGCCGT
CGGATATCCCGACATGCGTGATGAAGATGGAGCATTCATTTATACCCGCT
GGAACGAGTGTTGTAACGCTCGAGACGCTTATAATTCAGCCCGGGTATTG
GCGGGCAACTAACAAAAGCACCATCGTCTCGGCCTGCTACAATAAAAATG
CATGCAATGGAGGGGTGACGGGCTCTCCTGACTACTGCGATAACGGCTAC
ACTGAACCATGTGGGGGACAGGTTTGCAGTGGTCTGTTTCGGATGCGACG
ACTGCGAATATTGCACAGTCGGGAAGCCGTCGGATATCCCGACATGCGTG
ATGAAGATGGAGCATTCATTTATACCCGCTGGAACGAGTGTTGTAACGCT
CGAGACGCTTATAATTCAGCCCGGGTATTGGCGGGCAACTAACAAAAGCA
CCATCGTCTCGGCCTGCTACAATAAAAATGCATGCAATGGAGGGGTGACG
GGCTCTCCTGACTACTGCGATAACGGCTACACTGAACCATATTGTTCGGT
CTGCACAGAGAACTACGTCAAGGGTTTAGGCTTCACCTGCACAAAGTGCC
CCGACCACGCATGGAGCATAACGGTTGCTGCGGTCGCCACCGTGGTATCC
CTTTTCGTTGCTTTCGCTGCCTTCACGCATCTGACATCGCCTGAGAGGTT
GGGGACGAGTAGTACGATCACAGCCCGCGTGCTCCATCGGTTGCCGATCC
ATTCCTTAAAGATCATCACGTCTTGGCAGATTCTAACACAGATTGTTCGG
TCTGCACAGAGAACTACGTCAAGGGTTTAGGCTTCACCTGCACAAAGTGC
CCCGACCACGCATGGAGCATAACGGTTGCTGCGGTCGCCACCGTGGTATC
CCTTTTCGTTGCTTTCGCTGCCTTCACGCATCTGACATCGCCTGAGAGGT
TGGGGACGAGTAGTACGATCACAGCCCGCGTGCTCCATCGGTTGCCGATC
CATTCCTTAAAGATCATCACGTCTTGGCAGATTCTAACACAGTTTACTAC
TCTGGCCAGCATCATCTACCCGGCAATATATCAGACCTTGCTGAAGGTTT
TGGATAATTTCAATTTCGATCCTACAAAGATGCTGTCGGTGGCATGCATG
GTCACCGTGGACTTCCACTGGCGATTTTTAATTGTGACGGTTGGACCCAT
CTCTGTCATCCTAATGCTTATCGCGACGTATACCTACATCACGCGAAAAC
ATGGCACATCGGAAGAAATTATCAAGATCGCTCGAGACAAGCATGTATCT
TCTCTCCTCTTTATATTGTTCCTGGTGTACTCTAGCACCAGCTCTATAGT
GTTACAGATGTTCACATGCACCATGCTCGATGACGGAAAGATTTATCTTT
TGGTAGATTACACCATTGACTGTGACGCGCTTAGACACCGAGTTCTTATG
CCCTGGGCCGGGCTCGCGATATTGGTGTATCCAGTTGGTATACCTCTATT
TTTCGCCTTTCTTCTGTTCAAAAATCGTAGTGTGCTCCTTGACAAGAATC
TCCGCGAAAAAGACTCAAGCGTAGTTTCGATTTCAGATCTCTGGAAACCG
TACAAGCCGATGAGGTTTTATTACGAGGTCGTCGAGTTTAGTCGGCGACT
CGGGCTAATAGTCGTGTTGATGGCTACTGAAGACGATTCGGCCGCTCAGG
TTTCCCTGGCCCTTGTGCTTGCATTCGTATTTGCTATCATAACGGAAATG
TTGGCGCCGTACGAGTCGCACTGGGACGCCCGGATAAGTCGATTGGGGCA
TGCGGTGGTGTTTTTCAGCATGCTTTATGCTCTGTTATTAAAGGTTGATG
CTACGGACGATTATCAAGCCAGTCCAGACGTGTTCGAGGTTGTGCTAATA
TGTATCCATGTTCTTATGATTCTTCTAGCAATCGCCGAGGCGACTATGAG
GGGTATACACTAATTTACTACTCTGGCCAGCATCATCTACCCGGCAATAT
ATCAGACCTTGCTGAAGGTTTTGGATAATTTCAATTTCGATCCTACAAAG
ATGCTGTCGGTGGCATGCATGGTCACCGTGGACTTCCACTGGCGATTTTT
AATTGTGACGGTTGGACCCATCTCTGTCATCCTAATGCTTATCGCGACGT
ATACCTACATCACGCGAAAACATGGCACATCGGAAGAAATTATCAAGATC
GCTCGAGACAAGCATGTATCTTCTCTCCTCTTTATATTGTTCCTGGTGTA
CTCTAGCACCAGCTCTATAGTGTTACAGATGTTCACATGCACCATGCTCG
ATGACGGAAAGATTTATCTTTTGGTAGATTACACCATTGACTGTGACGCG
CTTAGACACCGAGTTCTTATGCCCTGGGCCGGGCTCGCGATATTGGTGTA
TCCAGTTGGTATACCTCTATTTTTCGCCTTTCTTCTGTTCAAAAATCGTA
GTGTGCTCCTTGACAAGAATCTCCGCGAAAAAGACTCAAGCGTAGTTTCG
ATTTCAGATCTCTGGAAACCGTACAAGCCGATGAGGTTTTATTACGAGGT
CGTCGAGTTTAGTCGGCGACTCGGGCTAATAGTCGTGTTGATGGCTACTG
AAGACGATTCGGCCGCTCAGGTTTCCCTGGCCCTTGTGCTTGCATTCGTA
TTTGCTATCATAACGGAAATGTTGGCGCCGTACGAGTCGCACTGGGACGC
CCGGATAAGTCGATTGGGGCATGCGGTGGTGTTTTTCAGCATGCTTTATG
CTCTGTTATTAAAGGTTGATGCTACGGACGATTATCAAGCCAGTCCAGAC
GTGTTCGAGGTTGTGCTAATATGTATCCATGTTCTTATGATTCTTCTAGC
AATCGCCGAGGCGACTATGAGGGGTATACACTAA
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