mRNA_H-elongata_contig1799.4782.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 4.370e-120 Identity = 331/1012 (32.71%), Postives = 478/1012 (47.23%), Query Frame = 1
Query: 10 IPVLLERIGDHEDNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEGSSE-ESW-----------LQSGGG-------------NLLRFLQGW--------DRVQGILAPGESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*---------DTRSRFKTATKFLRMSKYFTS*RW-------DSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVLGKGWLGAGIA---------WRSLSPSISSTTPGTSSIP*P*HW*AWRSCSGSWHLAKAGQLTGTFSHNT-FFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVESDLEDAFGTFWRSLLTMFESMLGSF---DFDVLLSAHECN-RPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEYNPTEPLPAGDLMASADTDPSRTTAANTARKENMTPGQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRW----------------FYPARTN----KWKGCTWTVGSVAIQICCWVLMSAVTLVYCCACAIAGS-VLWLWGLCSVVDWVKWGLTD-GREAFSKRKYRLI---VPGEERNEDWKKA-REIAKARNYTY-NATDSEQFSVGPLLKMTTGMDLAQLALHVQPNAEANRVKNYR-SPSLSRMISNQTLD 2772
IP LL D E+ +++ VM + +ASNPLV+ AG S+++++AEVD PM++ L L+ +D L+ +LLD LPHTVRG+G L P++ H QQ + D + L GY+VV W+LEP + K YN D +DPLQ ALDRGS L FV+S LVLDY+++KF ++P+W S + I+ FYTY E E W GG LLRFLQGW ++ +G N PH+T+LP LQF+LAG+IG P F+ VPAVRF L+ + Y+ + ++ + + W D AR+ + A + V G+G A W L ST + + L + G FF+AQ+ L+ASAPLLF+R+L +SQID TLGPM Q+IW M+S RF +F++VVMA FALAF+ +F +CD SDL++++G+F + LT+F++ LG F DFD + N P A +A +LLV + V++A+++LNLLIAV++TAH V A+ E+EFHLAR +LILQ++R VA+ R+P PFNL+ +GFL+D G+ SE A + CG + +H F+ P + +Y W T G RL+FA T+GL AV ++A+LW++S PW+AWRI+ W F R K++ W + I C + L AV L C +AGS VLWL G+C+V +W W L++ GR + K +PG+ER +W+ A + +AKARN+ + DSE F V PLL+ TTG+D+ Q L + +++ SPS + + LD
Sbjct: 703 IPTLLTSAEDEEE-VMDIVMYAVGNASNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQQIVDHLMNQLLDKLPHTVRGMGMTL------LRPMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRHLNRQATVGKRYNGPDYMDPLQRALDRGSKALFFVDSPLVLDYIYVKFSCTLPNWASSSSIPKTINAGFYTYTAFDEYEFWEVLSVRPGPPEANQGGALQPQPWNSKKWDDRLLRFLQGWNPTDMSPEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTV----------------FLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDA-GSDLDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLD------------GV-------------------------------------------SELAWWAVRGADRCG-----------------------LRQHKESFA-------------PITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKKGKFRAFLWVF--LGIIACVFALGFAVAL---CGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIRHEHDSEHFHVAPLLQATTGLDMEQFCLLAKEKFNDKNQEHWADSPSAGKCVGGGGLD 1594
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 355 bits (912), Expect = 7.460e-99 Identity = 317/994 (31.89%), Postives = 455/994 (45.77%), Query Frame = 1
Query: 7 HIPVLLERIGDHEDNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYE------------------GSSEESWLQSGG------------GNLLRFLQGWDRVQGIL-----------APGESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAV---RFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVL-GKGWLGAGIAWRSLS----PSISSTTPGTSSIP*P*HW*AWRSCSGSWHLAKAGQLTGTFSH------NTFFL--AQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTC-----------DGVESDLEDAFGTFWRSLLTMFESMLGSFDFDVLLSAHE---CNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEYNPTEPLPAGDLMA-SADTDPSRTTAANTARKENMTP-GQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRWFYPA-------------RTNKWKGCTWTVGSVAIQI-----------CCW----VLMSAVTLVYCCACAIAGSVLWLWGLCSVVDWVKWGLTDGREAFSKRKYRLIVPGEERNEDWKKAREIAKARNYTYNAT-DSEQFSVGPLLKMTTGMDLAQLA 2682
H+P LLE IGDHE ++I+T++ + SNP + AG SR ++ ++VD PM+ GL RL+ +D ++L+ LP TVRG+G AL G H+P +G+ +Q KR R+ L G++VV+W+LEP+L + K Y D LDPL+ ALDRGS L F+N+ LV DY+HIKF ++PSWTSR+ F ++ F+ Y+ GS +E +S G LLRFLQGWD +L A + + S P RF + S++ R D+ + S L + + ST+L G + AG+ + + P+I + + + W S G L TF + FFL AQ+ +ASAPLLFSR+L +SQID TLGPMTQVIW M+S RF+ F+ VVM SFALAFH +F TC D + L DAFGTF RS +T+F + LG DF++ +A C PD A EA ++L+VV+ VIMA++LLNLLIAV++TAHS V + ++EFHLARAKLI Q++R V R P P NL+ +G L+D TEP+ M + D + A+ A G E DA++ E A + IG S G DE +++++ W T +GG R++FAFT G AA+ MSA+LW +S PW+AW +LR +P TN+ G + ++ W V+ +AV + C + VLW GL + WV+ T E+ + + +PG+E + W++A ++ RN+ D F+V P LK TG+D LA
Sbjct: 769 HMPFLLENIGDHEHDVIDTILAAVASTSNPFAMAAGVSRTLRMSKVDFPMHSEGLGRLQSIMDDFTSKVLEQLPQTVRGMGVALLGGHQPI------VFGEGLEQGKRHRLTNLAGFIVVQWILEPNLLVGKINTQKKYAGPDYLDPLRRALDRGSEALDFLNTPLVKDYVHIKFACTLPSWTSRNPFQPTVNEGFFKYDDFDTYPLSEVFSAPDENLGSKDE---ESRGLKAALKEQFLTKSFLLRFLQGWDHRDSLLKWNIPIGDIRFASKKFKSDTRASNNXXXXXXXXXXXXXXXXXXXXXPGCCGGRFKSIIPSWLLCCNGNVSGNAXXXXXXNA----RGDAHDSSAHXXXXXXXXXXXSSCRQPLWFNDKPKRWTIPHSTILPGLQFSLAGVLGKPETFYQVPAIRFVFEIFTYLYV--FYDTWNFLDTS----TIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDAT------------------TEPVRFRRWMVRNPPEDENEANPADGAXXXXXXXXGHEN--DAVEGE---------AEGDQGNIGGGSPGDCPIA------------GTPGDEFIA----WTQTHEWRTFEGGVQRVLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVEKRAENLEDEEDDTNQGLGDIEEEEEMKEKVHPGYFRRIFITFLWSAVLVVATAVAAILCALYILFSVVLWFVGLHMIYKWVRTNWTP--ESNDRPR---AMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLA 1693
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 340 bits (873), Expect = 5.130e-94 Identity = 315/1030 (30.58%), Postives = 433/1030 (42.04%), Query Frame = 1
Query: 7 HIPVLLERIGDHEDNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEGSSEESWLQSGG----GNLLRFLQGWD---------------RVQGILAPGE--------------------SANA--------------FPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAV---RHAALIVSTVLGKGWLGAGIAWRSLSPSISSTTPGT------SSIP*P*HW*AWR----SCSGSWHLAKAGQLTGTFSHNTFFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTC-----------DGVESDLEDAFGTFWRSLLTMFESMLGSFDFDVLLSAHE---CNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEYNPTEPLPAGDLMASADTDPSRTTAANTARKENMTPGQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRWFYPARTNKWKGCTWTVGSV--------------------------------------AIQICCWVLMSAVTLVYCCACAI-AGSVLWLWGLCSVVDWVKWGLTDGREAFSKRKYRLIVPGEERNEDWKKAREIAKARNYTYNATDSE-QFSVGPLLKMTTGMDLAQLAL-----HVQPNAEANRVK 2721
HIP LLE IGDHE +IIET++ + +ASNP + AG SR ++ +EVD PM++ GL RL+ +D ELLD LP TVRG+G L G H+P T+G+ Q K R+ L G++ V+W LEP + + Y D +DPL+ ALDRGS GL Y + F ++ ++ + EG E+S Q G LLR LQGWD R +G A G +ANA PHST+LPGLQF+LAGI G P TF+ VP +RF ++ SY+ F + K S W ++ F+ A +R + L R + RH G G P IS G S+ + W S G +A ++ F AQ+ + SAPLLFSR+L +SQID TLGPMTQVIW MMS+ RF+ F+ +VM SFALAFH +F TC D L DAFGTF S +T+F LG DF+ A C+ P+ A A ++LLVV+ + M ++LLNLLIAV++T H V A+AE+EFH ARA+LI Q++R V+ +R P P NLI G L+D V+ +G++ G S AR + +PFS ++ W T +GG RL FAFT G+AAV +S +LWIVS PW+AW + R + A I+ C +L++ V + C I A +LW G+ + +PG+E WK+A E+A RN A + F + PLLK TG+D+ LA H + N+EA ++
Sbjct: 711 HIPALLENIGDHEKDIIETILATVTNASNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTMELLDKLPRTVRGMGMELIGGHQPI------TFGEGFHQGKHHRLGNLAGFIAVQWFLEPRVLLGDVAVENRYKEPDYIDPLRRALDRGSKGL----------YKYDDF----ETYKLSEILSTPVKPPTANQEG--EQSPAQKEGFISMTFLLRLLQGWDHRDPKRRCNFPSRVFRAKGQEASGAQAXXXXXXXXXXXXXXPVSAAANAQAPASRPEPPNQWRIPHSTMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYL-----VMLVLFCFSVLLKEHDSIPWGE--VTFYVFA-----AGLLWREI-LEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIALDDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDAFPLRDAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVW----RVGVWVTR----------------------------------------------------------------GRSQARML--------------------------KPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCLHRLVHKAEEETXXXXXXXXXXXXXXXXXERDDGXXXXXXXXXXXXXKEKPHLGYFRRFLSGIKSMCSLLVAMVAASFLCLLYIFATMILWAVGIXXXXXXXXXXXDKKNGDMPEP-----MPGQEDGHHWKRAWELASLRNQGARANRGQAHFHIAPLLKSKTGLDMQHLAQLTKNRHDESNSEAKLIE 1606
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 316 bits (810), Expect = 5.710e-87 Identity = 238/664 (35.84%), Postives = 324/664 (48.80%), Query Frame = 1
Query: 7 HIPVLLERIGDHEDNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYE--------------------------GSSEESWLQSGGGN------------LLRFLQGWDRVQGILAPGESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAV---------RHAALIVSTVLGKGWLGAGIAWRSLSPSISSTTPGTSSIP*P*HW*AWRSCSGSW----HLAKAGQLTGTF-SHNTFFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTC-----------DGVESDLEDAFGTFWRSLLTMFESMLGSFDFDVLLSAHE---CNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDL 1800
HIP LL IGDHE +IIETV+ + +ASNP + AG SR +++A VD PM++ GL RL+ R+D E +WMLEPSL E + +K Y DPLQ ALDRGS L F+ S LVLDY+H+KF ++P W+SR+ F I+ Y Y+ G+S S + G+ LLRFLQGWD + + +S + PH T+LPGLQF+LAGI+G P TFF VP +RF+ ++ SY L M F S S + +F R ++ F A L R + RH G + GI+ + + + + W S +A ++ F S F AQ+ + SAPLLFSR+L +SQID TLGPMTQVIW MMS++ RF+ F+ +VM SFALAFH +F TC D L DAFGTF SLLT+F S LG +FD+ A CN P A A + ++VV+ + M+++LLNLLIAV++TAH V +AE+EFHLARA+L++Q++R VA+ R P P NL+ G L+D+
Sbjct: 633 HIPALLVSIGDHEQDIIETVLFAVANASNPFGMAAGVSRFLRRARVDHPMHQRGLRRLQTRIDRFTLE----------------------------------------------------QWMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPHWSSRNPFQPTINEGLYKYDNFEVYDLAKLLRGSKNDQATGRTAPSGASSASTGSTNRGSFLWRSPGSIMSFLLRFLQGWDHPR---SNDQSVWSIPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSY--------------LVMLVLFCS----SVLLKEPDFIPRDEVIFYIF-AAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYV---FYDTWNFMDTSTICCIFVAFIFRMIARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEHSEPQCTLDDDDAFPLRDAFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKLGFGVLIDV 1219
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 301 bits (770), Expect = 9.150e-81 Identity = 279/904 (30.86%), Postives = 415/904 (45.91%), Query Frame = 1
Query: 1 HAHIPVLLERIGDHEDNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHE---------PSEPILSHTYGDLTQQRKRDRIDGLLGYVVV-------RW-------MLEPSLTSEFLKDSKNYNSRDIL-------------------DPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEGSSE------------ESWLQSGGG----NLLRFLQGWDR-VQGILAPGES--ANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVLGKGWLGAGIAWRSLSPSISSTTPGT---SSIP*P*HW*AWRSCSG-----------------SW---------------------HLAKAGQLTGTFSHNT-----FFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVESD-LEDAFGTFWRSLLTMFESMLGSFDFDVLLSAHE--CNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEY----------------------------NPTEPLPAGDLMASADTDPSRTTAANTARKENMTPGQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRW 2298
HAH+ L+ IGD E+ +I TVM + ++SNP V A AS + K D + GL RL++ +D ELL LP TV+GVG L S E P T +L R+++ + +GY+ V W + + ++ S+ D K + +L DPLQ AL +GS F+N+ LVLDYL +K+ + P+ R+ I+ F TY + +++L+ GG +LLR LQGWDR +L E + FPH+T+LPG QF LAG++G P FF VP VRFM + SY+ + + Y W S +Y + ++ F A L R + + +V S S + S+ G SS P A SG +W ++A Q T NT FF+A++ L+A APLLF+RVL ++Q+D+T GPMTQ+IW M+ +LARF++F+LVVM SFALAFH+++ + E D L +++ T SLL MF SMLG +FD + C P W ++A + LL ++ V+ AIL+LNLLIAV++T H V +A EFHLAR++ I ++ V RLP P NL+ AA+ +VD+ + C+ +G + P E G ++++ D DP AA P + SED +K E+ P G + +GN+ A+ E + DG+ +T+ P ++ A GG +RL+FA T+G A+A+S+VLW +S P +A RI+RW
Sbjct: 963 HAHLATLIGDIGDAEEQVIATVMCAVENSSNPFVTSAIASVCMAKHGRDCSKDRLGLARLQEEIDQFTTELLGKLPQTVKGVGLELISSFEQPDLGKNDEPDGEEEPATEAELA--RRKNIMANHVGYIAVVVHCLILDWEGGGIKDIKQIAIASQQALDEKAFALCSVLGACVSWLVSKMISATLQDLDPLQQALTKGSDAHDFINAPLVLDYLELKWKCTTPNLDRRNPLDYTINEGFSTYRSGNGKYTLPEKGVDIGDTFLERGGTTAEESLLRLLQGWDRGPTRVLRFKEKHLLHGFPHTTVLPGTQFLLAGLLGKPTDFFLVPFVRFMFETFSYL-------------VMLGLY-----WSSVAIQYSDIIPADEILFYLF-AAGLLFREILEFRDALPPSVSSSS-----SPTSSPSDATMSSDDGEDHGSSEPDSLAARAREERSGLSQRRVTSGLRRYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTILGNTLIGQAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQIIWNMLFHLARFSVFMLVVMVSFALAFHSLYSDPNCSEGDELFESYRTLRESLLDMFRSMLGDANFDRFEADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLLMAAILIVVDVFGEI---CHWVGKSLRFLSGCGKARPVASSAAVPASGGAGSDPRRRPEERKGPG-MISARDVDPVMPGAAAGFTAPAAAPAFDASEDEVKGESGPGVGG----GGNILVGNN------AKAASSEASRDSGDGLV----PMTEWPIAKR-----AVGGLERLLFALTMGPVALALSSVLWAISIPSLAGRIVRW 1817
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 296 bits (758), Expect = 7.750e-80 Identity = 212/604 (35.10%), Postives = 312/604 (51.66%), Query Frame = 1
Query: 46 DNIIETVMLVIMHASNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHLPHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEGSSEESWLQ------------SGGGN-----------LLRFLQGW--------DRVQGILAPGESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*---------DTRSRFKTATKFLRMSKYFTS*RW-------DSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVLGKGWLGAGIA---------WRSLSPSISSTTPGTSSIP*P*HW*AWRSCSGSWHLAKAGQLTG-------TFSHNTFFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVESDLEDAFGTFWRSLLTMFESMLGSF---DFDVLLSAHECN-RPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAH 1656
D++I T++ SNPLV+ AG S+++++AEVD PM++ L L+ +D L+ +LLD LPHTVRG+G L P++ H QQ + D + L GY+VV W+LEP L + K YN D +DPLQ ALDRGS L FV+S LVLDY+H+KF ++P+W S + I+ FYTY E ++ + GGG+ LLRFLQGW ++ +G N PH+T+LP LQF+LAG+IG P F+ VPAVRF L+ + Y+ + ++ + + W D AR+ + + + M ++ A + +V G+G A W L ST LA +L G T + FF+AQ+ L+ SAPLLF+R+L +SQID+TLGPM Q+IW M+S RF +F++VVMA FALAF+ +F +CD S L++++G+F +LLT+F++ LG F DFD + N P A +A +LLV + +++A+++LNLLIAV++TAH
Sbjct: 719 DDLIPTLL-----TSNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQRIVDHLINQLLDKLPHTVRGMGMTL------LRPMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRLLNRQATVGKRYNGPDYMDPLQRALDRGSKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEVLSVRPEPPEANPGGGSQPCNSKKWDDRLLRFLQGWNPTDMNPEEQPRGKSTRRSDRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCSCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNLLDTLTLSTV----------------------FLAFVFRLLGIREFGGPTDPGDYFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDA-GSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAH 1288
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 263 bits (672), Expect = 7.210e-70 Identity = 208/550 (37.82%), Postives = 281/550 (51.09%), Query Frame = 1
Query: 367 RWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYE------------GSSEESWLQSGGGN--------------------------------LLRFLQGWDRVQGILAPGESANAF-PHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTV--LGKGWLGAGIAWRSLSPSISSTTPGT------SSIP*P*HW*AWRSCSGSWH----LAKAGQLTGTF-SHNTFFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTC-----------DGVESDLEDAFGTFWRSLLTMFESMLGSFD---FDVLLSAHECNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDL 1800
+WMLEPSL E + +K Y DPLQ ALDRGS L F+ S LVLDY+H+KF ++P W SR+ F I+ F+ Y+ GS + Q+ GGN LLR LQGWD + ES + PH T+LPGLQF+LAGI+G P TFF VP +RF+ + SY L M F S S + +F R ++ F A L R + + + + +G LG + R + P IS G+ S+ + W S +A ++ F S F AQ+ + SAPLLFSR+L +SQID TLGPMTQVIW MMS++ RF+ F+ +VM SFALAFH +F TC D L DAFGTF S +T+F S LG + FD + S CN P A A + ++VV+ + M+++LLNLLIAV++TAH V +AE+EFHLARA+L++Q+++ VA+ R P P NLI G L+DL
Sbjct: 66 QWMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEYDDFEVYDLAKLLRGSGND---QAKGGNEPSGTPTASTGSTAGESLGSFLWQLPGSFMSFLLRVLQGWDHPRS----NESVWYYVPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSY--------------LVMLVLFCS----SVLLKEPDFIPRDEVIFYIF-AAGLLWREVLEFLDGVPTRRHRISRG-LGPEVGGR-VKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMIARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDPFPLRDAFGTFGDSFVTVFSSALGGPEIDLFDDVGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSAQSVAHLRPPPPLNLIKLGFGVLIDL 587
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 249 bits (636), Expect = 1.350e-65 Identity = 273/956 (28.56%), Postives = 384/956 (40.17%), Query Frame = 1
Query: 88 SNPLVVWAGASRDIQKAEVDLPMYKFGLNRLRDRLDALVFELLDHL------------------------PHTVRGVGRALHGSHEPSEPILSHTYGDLTQQRKRDRIDGLLGYVVVRWMLEPS---------LTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEG---------------------SSEESWLQSGGGNLLRFL-----------------QGWDRVQGILAPG-----ESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVLGKGWLGAGIAWRSL-SPSISSTTPGTSSIP*P*HW*AWRSCSGSWHLAKAGQLTGTFSHNTFFLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTC-----------DGVESDLEDAFGTFWRSLLTMFESMLGSFDFDVLLSAHECNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEYNPTEPLPAGDLMASADTDPSRTTAANTARKENMTPGQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRWFYPARTNKWKGCTWTVGSV--AIQICCWVLMSAVTLVYCCACAI-AGSVLWLWGLCSVVDWVKWGLTDGREAFSKRKYRLIVPGEERNEDWKKAREIAKARNYTYNATDSEQFSVGPLLKMTTGMDLAQLA 2682
SNP + AG SR ++ +EVD PM++ GL RL+ +D E + + P VRG+G L G H+P T+G+ Q K R+ L G++ V L S + ++ + Y D +DPL+ LDRGS GL VNS LV DY+H+KF ++P WTSR+ F ++ Y Y+ E S Q G + FL Q AP + PHST+ PGLQF+LAGI G P TF+ R +L+ + + R K + ++ K + R S + + +S R R R IVST W W+ L +P+I G +A ++T F A++ + SAP LFSR+L +SQID TLGPMTQVIW MMS+ RF+ F+ +VM SFALAFH +F TC D + DAFGTF S +T+F CN P+ A A ++LLVV+ V M ++LL LLIAV++T H V +AE+EFH ARA I Q++R V+ +R P P NLI G L+D A +L A F+ G S A+ + +PFS S+ T +GG RL FAFT G+AAV +SA+LWIVS PW+ + + A + +W + ++ I+ +L++ V + C + A +LW G+ +V W GL P E R A+A F V PLLK TG+D+ LA
Sbjct: 82 SNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTKEACESIKSPRLVLNVPRGVSVSQRAALGQAPTPVRGMGTELIGGHQPI------TFGEGFHQGKHHRLGNLAGFIAVA--LSESRIVATNTGRVANKRVTSHSRYKEPDYIDPLRRVLDRGSKGLDMVNSPLVRDYVHVKFTGTLPHWTSRNPFQPIVNEGLYKYDDFETYGLSEILSTPVKPPTANQEGEHSPAQKQGFISMTFLLTLPSQAPTPPMPVPPVQPVSATTNAQAPACRQKPTNQRRIPHSTMPPGLQFSLAGIQGKPHTFYKGLLWREILEFRNGV--PARRHKPPKR--QVPKNEDNTRAGS------------EQSLSSPRISRPGTRNRFNR---IVSTFT---WNVFYDTWKFLDTPTI-----------------------GCILVAFIFRVTTLDDKFFLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHIEPQCTFDDDDAFPIRDAFGTFGDSFVTVFTDC-------------RCNLPEGARNAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIKLVCGILLD---AGTMLWRAGAWFRR-----------------------------------------------------------------GRSQAKML--------------------------KPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVDSCLHCLVHKAG----EAASWLLQTIFSGIRSMFSLLIAMVAASFLCVLYVFATMILWAVGIWMIVTW---GLG------------ACQPAESR----------ARANRA------QAHFRVAPLLKSKTGLDMKHLA 842
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI) HSP 1 Score: 195 bits (495), Expect = 4.880e-49 Identity = 149/482 (30.91%), Postives = 231/482 (47.93%), Query Frame = 1
Query: 1315 MTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVESDLEDAFGTFWRSLLTMFESMLGSFDF----DVLLSAHECNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFNLIGAAMGFLVDLPHAVYLLCYAMGIFKEYNPTEPLPAGDLMASADTDPSRTTAANTARKENMTPGQEGSEDALKCENAPNACGRTATSESCQIGNSSARFITARKVVPEHNSLFSDGVENDENTITDEPFSRSYLWLTAQGGWDRLIFAFTIGLAAVAMSAVLWIVSAPWIAWRILRWFY-----------------PARTNKWKGCTWTVGSVAIQICCWV-LMSAVTLVYCCACAIAGSVLWLWGLCSVVDWVKWGLTDGREAFS---KRKYRLIVPGEERNEDWKKA-REIAKARNYTY-NATDSEQFSVGPLLKMTTGMDLAQL 2679
M Q+IW MMS RF +F++VVMA FALAF T+F +C+ +S L ++FG+F + L++FE+ LG F F DV + P A +A +LLV + V++A+++LNLL+AV+TTAH V+A+ E+EFHLAR +LILQ++R VA+ R+P P NL+ +G L+D G+L D R C++ F+ P + +Y W T G RL F T+GL AVA++++LW++S PW+AWR++ W P + K + +G++A CW+ L+ A L C AC + LW G+ +V +WV+W ++ + S ++ +PG+E ++W+ A + +AKARN + SE F V PLL+ TTG+D+ +L
Sbjct: 1 MIQIIWRMMSQTLRFGVFIVVVMAGFALAFTTVFGSCNA-DSLLGESFGSFGTAFLSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQLIVGLLLDT------------------------VGELAWWVRLDAGR----------------------------------------CKLRQEGEGFV---------------------------PITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKRGKLRESLLALGTIAA---CWLALLFAAAL--CGACIVGSFFLWFRGVWNVWEWVRWRRSEEGKFVSGETDQECPTAMPGQEHGQNWRHAWQHVAKARNLRIRHEHGSEHFHVAPLLQSTTGLDMKRL 385
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 138 bits (347), Expect = 3.000e-29 Identity = 144/482 (29.88%), Postives = 215/482 (44.61%), Query Frame = 1
Query: 349 LGYVVVRWMLEPSLTSEFLKDSKNYNSRDILDPLQHALDRGSSGLAFVNSALVLDYLHIKFWSSIPSWTSRDVFHEAIHTSFYTYEGSSEESWLQSGGG---NLLRFLQGWDRVQGI--LAPGESANAFPHSTLLPGLQFTLAGIIGNPVTFFAVPAVRFMLDLMSYM*DTRSRFKTATKFLRMSKYFTS*RWDSFGARYWNFSRRFQLAPTSFRAMRLTIRRAVRHAALIVSTVLGKGWLGAGIAWRSLSPSISSTTPGTSSIP*P*HW*AWRSCSGSWHLAKAGQLTGTFSHNTF---FLAQYCLSASAPLLFSRVLFMSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVESDLEDA--FGTFWRSLLTMFESMLGSFDFDVLLSAHECNRPDWAYEASVWLLVVFEVIMAILLLNLLIAVMTTAHSAVDAHAEEEFHLARAKLILQTSRGVANARLPTPFN 1764
+G +V+ MLEP L RD PL A+ S + F+ + LV+DYL +KF + +P+ E W + G NL RF+ D Q + + G ++ P T LPGLQF LAG+ G FF VPA+R LD++ Y S F LR T+ WD Y L ++ + V+ A + + W + +T + S AW C G TG+ S N +LAQY +ASAP + +VLF++Q+ +LGP+ + ++ L RF +LV+ FALAF+ +F + D D + T++ S+LT+F SMLG+F F+V A EA L+V F +M I LLNLLIA++ TAH+ ++ +A++E L+ A +I Q R + LP+P N
Sbjct: 526 VGTTLVQEMLEPELAG--------LQPRDCAGPLAQAMQ--SRHVDFIYTPLVVDYLRLKFSAGLPN-------------------PFRETDWRREHGRVDRNLARFMVNEDESQLMVYILQGGCPDS-PSWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYT-GVVSVFVLKVVVLRDVGRITA--WDVLWLVY--------LVGAIWKQV-----HEVQEAGSLRVHLFNP--------WNV----VEATKLASLSTAFFFRMHAWV-CDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPDGGDIAEYDTYYSSILTLFSSMLGNFSFEVFKGAPMA-------EAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLN 941 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1799.4782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1799.4782.1 >prot_H-elongata_contig1799.4782.1 ID=prot_H-elongata_contig1799.4782.1|Name=mRNA_H-elongata_contig1799.4782.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=528bp MSQIDDTLGPMTQVIWVMMSYLARFTIFLLVVMASFALAFHTIFFTCDGVback to top mRNA from alignment at H-elongata_contig1799:8798..15348+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1799.4782.1 ID=mRNA_H-elongata_contig1799.4782.1|Name=mRNA_H-elongata_contig1799.4782.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6551bp|location=Sequence derived from alignment at H-elongata_contig1799:8798..15348+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1799:8798..15348+ >mRNA_H-elongata_contig1799.4782.1 ID=mRNA_H-elongata_contig1799.4782.1|Name=mRNA_H-elongata_contig1799.4782.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3168bp|location=Sequence derived from alignment at H-elongata_contig1799:8798..15348+ (Himanthalia elongata Himel1 dioecious)back to top |