mRNA_H-elongata_contig179290.4752.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 215 bits (547), Expect = 5.510e-61 Identity = 122/337 (36.20%), Postives = 192/337 (56.97%), Query Frame = 1
Query: 28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAV----RDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKT-SIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
+P ++ EA S+EWP+WK AI EM + G + +VE PK ++G++ VF K + + IE YK RLVAQGF +V GI + E+ +P A I ++L++ WE Q+DV A L D+EEEIY++ P + K+ V L++ +Y L +G + KK EL + G RS+ D CVF W+ N ++I+++ L V ++T + AV R++ + F + DLGE + LG ++ RDR+ TL+ QH YI + F + S+ + + LS P T + E+M+ IPYR+++G+LM+ A TRPDI++A L++F N
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLI---ALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQN 443
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 213 bits (542), Expect = 3.050e-58 Identity = 120/339 (35.40%), Postives = 188/339 (55.46%), Query Frame = 1
Query: 4 GSTRQLDREPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KALSKSDSPQTDPEVEEMRQIP-YRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
G ++D P ++ EA+AS EW +WK+A+ EM G + + P G+ +G + VF++K D+DG I +YK RLVAQG+ ++ G+ Y E+ +P +R L + E Q+DV A L ++EEEIY+ PE Y D +V LRK +Y L +G W ++F +L + GF + +AD CV++ I G + II V+VD LL+ + T D + +L + F +KDLGE +G +I RDR GT++ Q QYI + FG+ +S+ + K +TD V + + Y+ ++G+L++ A TRPDIS A +L +F N
Sbjct: 870 GDDIKIDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKK---RTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASN 1204
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GR04_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GR04_9APHY) HSP 1 Score: 211 bits (537), Expect = 1.070e-57 Identity = 122/332 (36.75%), Postives = 185/332 (55.72%), Query Frame = 1
Query: 28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
+P T +A S + +W++A E+ A W +V P GKR +G+ VF K + DG +E+YK RLVA+G+ + G Y E +PT Q +R++L++ A E +D+ A L D+EEEIY++ PE + + V L K++Y L W KK L GF R Q+D ++ +I G V +I+ V++D + +A+ +K+ + V++L S F ++DLG + LG I RD T++ Q QYI M E +G++ +S+ A LSK+ +PQT E E M ++PY VGALM+ A TRPDI FA LA+FN N
Sbjct: 743 DPWTYKQAMGSPDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYI-RGDVHIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDHAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMDPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNAN 1073
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY) HSP 1 Score: 211 bits (537), Expect = 1.420e-57 Identity = 122/332 (36.75%), Postives = 185/332 (55.72%), Query Frame = 1
Query: 28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
+P T +A S + +W++A E+ A W +V P GKR +G+ VF K + DG +E+YK RLVA+G+ + G Y E +PT Q +R++L++ A E +D+ A L D+EEEIY++ PE + + V L K++Y L W KK L GF R Q+D ++ +I V +I+ V++D + +A+ +K+ + V++L S F ++DLG + LG I RDR T++ Q QYI M E +G++ +S+ A LSK+ +PQT E E M ++PY VGALM+ A TRPDI FA LA+FN N
Sbjct: 883 DPRTYKQAMGSPDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYIRED-VRIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNAN 1213
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GXP1_9APHY (Integrase catalytic domain-containing protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXP1_9APHY) HSP 1 Score: 209 bits (533), Expect = 3.110e-57 Identity = 122/331 (36.86%), Postives = 183/331 (55.29%), Query Frame = 1
Query: 31 PTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
P T +A SS+ +W++A E+ A W +V P GKR +G+ VF K + DG +E YK RLVA+G+ + G Y E +PT Q + ++L++ A E R +D+ A L D+EEEIY++ PE + + V L K++Y L W KK L GF Q+D ++ +I G V +I+ V++D + +A+ +K+ + V++ S F ++DLG + LG I RDR T++ Q QYI M EH+G++ +S+ A LSK+ +PQT E E M ++PY VGALM+ A T PDI FA LA+FN N
Sbjct: 485 PRTYKQAMGSSDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVEHYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALHLILALAAAEDLELRSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTHLQSDRSIYVYI-RGDVRIIVPVFIDDMTLASKSKKALDDTVKESKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLEHYGLSDCKSVSTPMDPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTCPDIMFAIGCLARFNAN 814
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GDH6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GDH6_9APHY) HSP 1 Score: 201 bits (511), Expect = 5.370e-57 Identity = 109/330 (33.03%), Postives = 181/330 (54.85%), Query Frame = 1
Query: 28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
EP T+ +A+ S EWP+W++A+ E++ W++VE P+ ++ +G + V ++K +K+G I KYK RLVA+G+ ++ G+ Y E+ +P IR +L + L WE Q+DV A L ++EE+Y+ PE Y D + L+K +Y L +G W +L GF+R +DPC + I G I I+ ++VD LL+ +Q R+L + F + DLGE +G +I RD + T+ Q +YI ++ G+T + + + + + P+TD E + R Y ++G+LM+TA +TRPDI+ L+ F N
Sbjct: 105 EPKTLSDAKRSLEWPKWEQAVQTELNQLQGMETWELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFTPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYCICKLKKTLYRLKQSGREWNIVLNRKLLDVGFKRLFSDPCAYIQI-KGDKIEIVTIWVDDLLIFTNDCALMDQLKRELQNMFEVTDLGEPQKIVGIEIERDHSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKEEPETDDECD--RDNGYASLIGSLMYTAIVTRPDIAHPVQWLSSFTAN 431
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 209 bits (532), Expect = 6.680e-57 Identity = 122/333 (36.64%), Postives = 190/333 (57.06%), Query Frame = 1
Query: 37 TMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEA--DVEEEIYVELPE--AYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVT--KTSIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
T+ EA+ +WP+W AI E++ G W++V+RP V+G++ V K D G I+KYK RLVAQGF ++ GI Y E+ +P + IR++L++ GW+ + D + A L + D +E IY+E P A +D + V LRKA+Y L G W + I L GF R+++D VF + ++ I ++ ++VD + ++ + R + +P+ DLGE S+ LG +++RDR A TL+ QH YI ++ F T K S I + L+KS P + ++ MR+IPYR+ +G+LM+ A TRPDISFA LA+F+ N
Sbjct: 965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVF-FAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQN 1295
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A4S4MA66_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MA66_9APHY) HSP 1 Score: 198 bits (503), Expect = 1.640e-56 Identity = 113/316 (35.76%), Postives = 173/316 (54.75%), Query Frame = 1
Query: 76 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISS-VAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
W A E + A G W+V P G +G + VF+ K DG +++YK RLVA+GF + G Y E+ +PT A +R++L++ E D+ A + D++ EIY++ PE ++ V +RK +Y L AG LW +K L + GF R +AD V+ + G+ VII ++VD + + +K + EQ + +L F ++ LG+ S+ LG +I RDR +L+ Q QY+ M + FG + S +S+ + K L +T E +EM+ IPY VGALM+ AT TRPDI+F LA+FN N
Sbjct: 20 WTAAALDEYNNLIANGTWEVTSLPPGFHAIGCKWVFLTKYLADGSVDRYKARLVAKGFSQRPGFDYVETFAPTVRMATLRIILALAALENLEIVSTDISQAFINGDLDVEIYMQQPEGFKHGNPGDVLRIRKGLYGLKQAGRLWNQKLNAALLSIGFLRVKADASVYVY-ARGSCRVIIPIHVDDITLVGPSKPEIEQIISELSQHFKLRVLGDTSWLLGIEIIRDRAKCSLSLSQRQYVVNMLDRFGFSSCSPVSTPMEPGKRLGPDQCARTFAEQQEMQAIPYINAVGALMYLATSTRPDIAFTVSTLARFNCN 334
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 201 bits (510), Expect = 8.260e-56 Identity = 122/332 (36.75%), Postives = 182/332 (54.82%), Query Frame = 1
Query: 28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGL-LRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISS-VAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
EP T +A S QW+ A+ EM + G W +VE P G++ +G++ V+ K DG IE++K RLVA+GF + G Y E+ + T Q +R VL++ R +D+ A + +D++ EIY+ PE +R ++ L K++Y L A LW +K GI ++Q N V VI+ V+VD + +A+ ++ ++ V L F ++DLG SY LG +I+R+R L Q QYI E FG+T ++ + LSKS SPQT EVEEM +IPY VG+L++ ATMTRPDI++ A LA+FN N
Sbjct: 103 EPVTYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIY--------------IYQ---NDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSN 417
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A2N9IT45_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IT45_FAGSY) HSP 1 Score: 202 bits (513), Expect = 8.880e-56 Identity = 117/339 (34.51%), Postives = 189/339 (55.75%), Query Frame = 1
Query: 25 REPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAY--RDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*------KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
++P+T +A + +W A+ E D GVW++V+R +G +V+G + +F RK D G +EK+K RLVA+G+ + G+ +EE+ SP IR +LS++ +E Q+DV A L D+EE++Y+E PE + + +V L K++Y L A W KF + GF ++ ++PCV+ ++ V VI+ +YVD +L+A ++ + L F +KDLGEASY LG +I RDR L+ Q YI T+ E F ++ ++G ++LS+ D P+ D E + + PY VG+LM+ TRPDI+FA +++F N
Sbjct: 329 KDPSTYSQAIKDFDSKKWISAMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKV-VILTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLEKF-----HMVDCLSGRIPYNNLRSLSQKDCPKNDQETLDPKLYPYASAVGSLMYLMICTRPDIAFAVGMVSRFQSN 661 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig179290.4752.1 >prot_H-elongata_contig179290.4752.1 ID=prot_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRback to top mRNA from alignment at H-elongata_contig179290:268..1284+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig179290.4752.1 ID=mRNA_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1017bp|location=Sequence derived from alignment at H-elongata_contig179290:268..1284+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig179290:268..1284+ >mRNA_H-elongata_contig179290.4752.1 ID=mRNA_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig179290:268..1284+ (Himanthalia elongata Himel1 dioecious)back to top |