mRNA_H-elongata_contig17925.4748.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A6H5J9X5_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9X5_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 2.950e-155 Identity = 239/434 (55.07%), Postives = 310/434 (71.43%), Query Frame = 2
Query: 218 LQPGLYCKRSPRTEAVVSMVPALRYPHYEGTPWVIGGDLATIFPYLAF-----YLPAPTFIRRWLSVDAD-----GSPRRNVSN----NSCHTLNDATADDIDG-----------------KRGIGNEGARTRTSADHHKEAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAEGKISGLKTPLLAVSALDDPIMISEGSPVDEIVDVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAIAATDNI 1426
L+PGL+C R+ RT+A++SMV AL++PHY+GTPW+IGGDLAT++P+LAF ++P + RRWLSVDAD G+ + V N +N + D +DG G G G +KEA+ALD+ALP+ GLD SKPFY+VLHGL GGSAE YVLDF HAL RG G+CVM++RGCMGTPVRG+ FHGAR+SD R+TVKA+R++LP TPL MVGYSMGGIIA NYA G +SG++CCVS+SG FD+R + +HS +VWQP+LA LKE+FV+ N R+I R G+++ I+ CK V+DIDT++VAP+ GY V YY DMSAAA+GKI+GL+TP LAV++LDDPIM ++GSP+ E+ + NLF LLTR GGHVGWP GW P RN+W WMS+T+LDFCEA+ AT ++
Sbjct: 117 LRPGLHCGRTARTDAIISMVTALQHPHYKGTPWIIGGDLATLYPFLAFRSFAFHVPVVKYARRWLSVDADDTRTNGTKAQEVGGGNGTNGGIGVNHDSPDSLDGFTTCGGTPSAPGAVPSAANGHGTGGDGKGLDDGDNKEAVALDIALPDTGLDPSKPFYLVLHGLTGGSAEPYVLDFVTHALGRGCGLCVMISRGCMGTPVRGDNFFHGARISDVRSTVKALRRSLPEHTPLVMVGYSMGGIIATNYAALTGENSGVSCCVSISGSFDTRTNIES-RHSQQVWQPLLAMALKEHFVLSNTREIVKR---GLNVSAIEACKNVLDIDTHLVAPYNGYPDVAAYYADMSAAADGKIAGLRTPTLAVTSLDDPIMTADGSPIAEVDTIKNLFILLTRNGGHVGWPTGWNPNRNRWGWMSTTSLDFCEAVVATADL 546
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A835ZIP5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIP5_9STRA) HSP 1 Score: 306 bits (784), Expect = 7.280e-94 Identity = 180/388 (46.39%), Postives = 236/388 (60.82%), Query Frame = 2
Query: 176 DKHFGVAVLG-HSPPLQPGLYCKRSPRTEAVVSMVPALRYPHYEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQ-IIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAEGKISGLKTPLLAVSALDDPIMISEGSPVDEIVDVDNLFFLLTRKGGHVGW 1333
D+ +AV G H ++ GLY + + V+ VPALR P Y GTPW+ GDL T+ PY+ F + + RRWL V P ++ L DA A D D G + +R + A+ALD+A+PE G D +KPFY+VLHGLNG SAE Y+LDF AL RGS V++ RG GTP + +FHGAR+SD A V +R+AL TPLA+VG+S+GGIIA+NY GA + LN VS++G FD+R +S + HS R WQP+LA LK FV PN ++A ARGVD R + VVD D+++VAP+ GY V YY DMSA GK + PLLAV ALDDPIM G P+ ++ DNL+ L+T+KGGH+GW
Sbjct: 56 DEQLRLAVTGRHDSGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATH-----LQDAIAHDNDN----GTDASR--------QLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPC-ADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMS-HAHSRRAWQPLLAIELKRRFVAPNAARMA---ARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGW 421
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A0L0FS42_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FS42_9EUKA) HSP 1 Score: 234 bits (598), Expect = 1.780e-65 Identity = 139/397 (35.01%), Postives = 203/397 (51.13%), Query Frame = 2
Query: 218 LQPGLYCKRSPRTEAVVSMVPALRYPHYEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALP-EGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAEGKISGLKTPLLAVSALDDPIMISEGSPVDEIVDVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEA 1405
+QPG Y +PR + + V HY T W+ G AT++P+L + + + R W+ DG E + LD+A P + G +P +VLHGLNGGS E Y +D A +G VM+ RG M TP+ +F+G R SD RAT+ A++ LP +T + G+SMG II NY TR G D+GL VS+SG FDS SLY S +VWQP L LK+NF+ N + + +DL R + V++ DT + AP G+ ++E+YY +MS + ++ ++ PLLA+ A+DDPI+ + P+ NLFFL+T GGHVGWP G P ++++ +MS+ L FC +
Sbjct: 187 VQPGFYYSNTPRNNRIAAGVDE----HYNPTWWLFTGTHATLYPFLTYTIEEVRYKRMWVWNPVDG-------------------------------------------EKVGLDIAFPSDKGFQPDRPVLLVLHGLNGGSKELYCMDLVKRACAQGYTCVVMIARGLMQTPLTSANLFNGTRTSDLRATIVALKDVLPSDTKMVGCGFSMGAIILNNYLTRCGDDAGLEAAVSLSGGFDSVKN-SLYDASRKVWQPFLVYALKKNFITEN---LDHPGFQEIDLHRAHRARDVIEFDTALSAPLAGFPTLEDYYREMSGNYDDRMDQIRIPLLALHAVDDPIVDVDSIPLAHTATNANLFFLVTMNGGHVGWPTGVRPNQSQFGFMSNVVLSFCHS 532
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A7S4MNZ9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNZ9_9STRA) HSP 1 Score: 236 bits (603), Expect = 2.110e-65 Identity = 153/434 (35.25%), Postives = 214/434 (49.31%), Query Frame = 2
Query: 209 SPPLQPGLYC-KRSPRTEAVVSMVPAL--RYPHYEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALPEGGLDA-SKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKEN----FVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAE-----------GKISGLKTPLLAVSALDDPIMISEGSP--VDEIVDV-----DNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAIAATDNI*Q 1432
+P L+PG Y ++P T A+V+ Y GTPW++ GD T P++ +LP +RRWL D G KEA+ LD A P G+ KP Y++LHGLNGGS E YV DF + GS + ++VTRG M +P+ GE + + ARM+D + KA+R+ +A VGYSMG I ANY R+G++ L+ VS+SG D+R L +KHSL WQP LAK L+E F+ RRK+ + V+ ++V++D ++GY +VE YY ++ A + G+IS + P L V+ALDDPI G P + + V N+F LLTRKGGHVGWP+G P + W WMS A F ++ N Q
Sbjct: 219 NPELEPGFYYDSKNPLTSAIVNNWDETFRTYDDGRGTPWLVTGDTRTGIPFVVNHLPEQKLVRRWLPTDVPGE-----------------------------------------KEAVILDFAFPNDGIHRRDKPMYLILHGLNGGSNEDYVKDFVARSRVEGSTIAILVTRGLMNSPIYGENLINFARMNDISSAAKALRRVAGPNQTVAGVGYSMGAICLANYLARSGSNCDLDAAVSISGALDTRVQLH-FKHSLHFWQPFLAKTLRETITGKFMNKLRRKLTPEQVLDVE-----EAASIVELDRAFFVRYYGYDNVEHYYSELGAMGDWVSFHGPPHKTGRISNVSVPFLTVNALDDPI----GDPRCIRDPAKVAKSGKGNVFVLLTRKGGHVGWPLGINPSKEGWRWMSDVASSFVHSVDRVRNTQQ 601
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A7S2LSQ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSQ2_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.190e-62 Identity = 148/423 (34.99%), Postives = 208/423 (49.17%), Query Frame = 2
Query: 212 PPLQPGLYCKRSP-RTEAVVSMVPALRYPHYEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALPEGGLDAS-KPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAE-------------GKISGLKTPLLAVSALDDPI---MISEGSPVDEIVDVDN--LFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAIAATD 1420
P + G Y S R++A+V P + GTPW++ GD+ T+ P+L + IRRW+ D G EA+ALDL P G+ S KP Y++LHGLNGGS E +V DF + + GS V VM+TRG TPV GE + H AR SD A V+AI++ + VGYSMG I ANY ++G L+ V++SG D+R LS Y+ S R+WQP+LA+ +K RK+ R R + I R + +D + ++P+ G+ S +YY +M A + G+I+ + PLL ++ALDD + GS ++V N LF LLTR GGHVGWP GW P + W WMS+ A F A+ T+
Sbjct: 262 PNISDGFYFDASNNRSKAIVEEWPVENRIYSRGTPWILNGDMRTVIPWLLNSVDVLPHIRRWVPSDVPGD-----------------------------------------NEAVALDLFFPANGVYYSEKPIYIILHGLNGGSDEPFVQDFVSRQIAEGSTVAVMITRGFRNTPVVGENLPHFARTSDFEAAVRAIKRVSKDSQLIVGVGYSMGAITLANYVAKSGEICHLDVAVAISGALDTREQLS-YERSKRIWQPLLARTMKNMLRKKFERKLLERLGRQRFISFI-RSSNMASLDEHGMSPYHGFNSTVQYYAEMCAMGDMDLHEFNSYPSTVGRIADISIPLLTINALDDTVGAWRSLAGSDPSKLVHTGNGNLFILLTRHGGHVGWPTGWNPSYDAWQWMSNAAGSFALAVERTN 641
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A7S1UTR3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTR3_9STRA) HSP 1 Score: 221 bits (564), Expect = 7.530e-61 Identity = 126/310 (40.65%), Postives = 177/310 (57.10%), Query Frame = 2
Query: 542 KEAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQ-ALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAE---------GKISGLKTPLLAVSALDDPIMI------SEGS--PVDEIVDVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAIAAT 1417
+EA+ LD+A P G D +K Y++LHGLNGGS E +V DF + E G + +M+ RG M TPV G IFHGAR +DA A K +++ A+ LA VGYSMG I+ NYA R G D L+ V +SG D RP +K + R+W+P++A L++ FV+ + R R ++ + R + ID V + G+ + YY +MSA + G+I + PL VSALDDP++ +EG P + + NL LLT+ GGHVGWPMGW PW++KW WM++ A F EA+ AT
Sbjct: 198 EEAVRLDVAFPPTGHDPTKTLYLLLHGLNGGSLEGFVQDFVHRRHEEGHTIVIMIARGLMDTPVVGWDIFHGARTTDAHAAAKVLKEKAVGPNEMLAGVGYSMGAIVLTNYAARYGEDCALDVVVPVSGGLDMRPQ-EFFKRAKRLWEPMIAFTLRDQFVIGKFGERYRMRLRKQEMLALMRSTDISMIDREAVVTYNGFDDLRHYYSEMSAMGDIPADGNEVGGRILSVAVPLCVVSALDDPLISWKTVAGNEGGRHPSELVKASPNLVLLLTKGGGHVGWPMGWFPWQHKWEWMNNAAHSFVEAVVAT 506
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A7S4ADV3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADV3_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.130e-59 Identity = 121/319 (37.93%), Postives = 172/319 (53.92%), Query Frame = 2
Query: 545 EAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQAL----------------------PFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPL---SLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAEGKISGL------KTPLLAVSALDDPIMISEGSPVDEIVDVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAI 1408
EA+ALD+ P G + K +++LHGLNGGS E YVLD A G + V++ RG M TPVRG+ FHGAR SD V A+ AL ++ + MVG+SMGGII ANYA ++ SGL +S SG + L +HS +WQ LA GLK + P+ K + G+ +Q ++ ++V +IDT +V + GY +V +YY DMSA G GL + PLLAV A+DDPI I E + + + DN+ L T+ GGH+GWP GW P +N+W +M ++++ +
Sbjct: 19 EAVALDICFPTNGYQSDKATFLILHGLNGGSTEPYVLDLARCATREGHTLAVVINRGLMKTPVRGDVTFHGARTSDVGCAVDALHYALYGKGCRTXXXXXXXXXXXXXXNTIKSKIVMVGFSMGGIIVANYAAKSKHHSGLAGALSFSGTLCTARNLLDCPAARHSTDIWQTPLAWGLKASIFKPSMHKFVKK---GITVQNVEDVQSVREIDTQLVCKYHGYPTVYDYYKDMSAGGLGDEHGLQRLNNTRIPLLAVHAIDDPITIYEVTLAEHVDQTDNVMLLATKHGGHIGWPTGWFPSQNRWKFMMDISMEYAAEV 334
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A1E7FUG7_9STRA (Hydrolase_4 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUG7_9STRA) HSP 1 Score: 209 bits (533), Expect = 3.620e-59 Identity = 119/281 (42.35%), Postives = 163/281 (58.01%), Query Frame = 2
Query: 596 KPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQAL-----------PFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSG-------IFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAEG------KISGLKTPLLAVSALDDPIMISEGSPVDEIVDVDNLFFLLTRKGGHVGWPMGWLPWRNKW 1366
KP ++V HGLNGGS E YVLD A + G V VM+ RG M TP++G + FHGAR SD TV A+ AL ++ + MVG+SMGGIIAANY ++ +SG+ + SG + + PP +HS++VWQP LA GLK + P K A R + + ++ TV+DIDT++V + GY+SV +YY D SA G ++ G K PLLAV A+DDPI + E + +EI DN+ L T+ GGH+GWP GW P +N+W
Sbjct: 1 KPTFLVSHGLNGGSTEPYVLDLARRATKEGCTVAVMINRGLMKTPIKGYESFHGARTSDLGCTVDALNYALYGTSTGTTXXXXKKSKIIMVGFSMGGIIAANYTAKSKENSGIAGTLCFSGSICASKLLLKNCPPA---QHSMKVWQPSLAWGLKATIIKPLMPKFAQRN---ITMAQVENVYTVIDIDTDLVCKYHGYSSVHDYYEDNSAGGLGDTKGMNRLMGTKVPLLAVHAIDDPISLYEVTLHNEISKTDNVMLLSTKHGGHIGWPTGWFPSKNRW 275
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: B7G6F1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6F1_PHATC) HSP 1 Score: 209 bits (531), Expect = 1.140e-55 Identity = 133/393 (33.84%), Postives = 188/393 (47.84%), Query Frame = 2
Query: 299 YEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQALPFETPLAMVGYSMGGIIAANYATRAGADSGLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTVVDIDTNMVAPFFGYTSVEEYYIDMSAAAE--------------GKISGLKTPLLAVSALDDPIMISEGSPVDEIV---------DVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEAI 1408
Y +PW+ GD T P+L + ++ R WL +D DG E ALD+ PE G D +KP Y++LHGLNGGS E YV DFT GS V VM+ RG P+RG +FHGAR+SDA +RQ L + LA VGYSMG II +NY R+G + L+ V++SG D R Y+ + R+WQP+LA+ L+++FV+ + R ++ + R V +ID V + G+ ++ YY +MSA + +I L PLL + ALDDP++ + + NL LLT+ GGHVGWP+GW + N W WM+ A+ F A+
Sbjct: 216 YGASPWIPTGDGRTGLPFLLNLVRDFSYTRVWLPLD-DG-------------------------------------------EVTALDIGFPEAGHDVTKPLYLILHGLNGGSQEGYVQDFTWRRTGEGSTVVVMIARGLGDLPIRGWDVFHGARISDAHTAALRLRQTLIGDQILAGVGYSMGAIILSNYVARSGENCALDSAVAISGGLDMRFEADFYR-AQRLWQPMLAQTLRDDFVVGKWGERVHARLTKDQMKNLMRAAHVSEIDETAVVAYNGFRDLDHYYSEMSALGDIPIEEYNGPSLEPQRRIQSLSIPLLVIHALDDPLVTFRTVGANHGLMHPTNLTKTGTGNLLLLLTKGGGHVGWPLGWFFFLNTWKWMNDAAMSFTNAV 563
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Match: A0A7S1UFM6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM6_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.380e-55 Identity = 136/416 (32.69%), Postives = 199/416 (47.84%), Query Frame = 2
Query: 218 LQPGLYCKRSPRTEAVVSMVPALRYPHYE--GTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPRRNVSNNSCHTLNDATADDIDGKRGIGNEGARTRTSADHHKEAIALDLALPEGGLDASKPFYVVLHGLNGGSAEAYVLDFTNHALERGSGVCVMVTRGCMGTPVRGEQIFHGARMSDARATVKAIRQAL-PFETPLAMVGYSMGGIIAANYATRAGADS------------GLNCCVSMSGIFDSRPPLSLYKHSLRVWQPVLAKGLKENFVMPNRRKIATRRARGVDLQIIDRCKTV--VDIDTNMVAPFFGYTSVEEYYIDMSAAAEGKISGLKTPLLAVSALDDPIMISEG-SPVDEIV--DVDNLFFLLTRKGGHVGWPMGWLPWRNKWLWMSSTALDFCEA 1405
++PG Y +PR AV + PAL +YE GTPW+ GD T FP+++ + RRW+ DG E +A D P GG D KP ++LHGLNGGS EAY+LD LERG VM++RG M TP+ F+GAR SD A V+ +++++ P+A VG+SMGG++ +NY G GL V++SG D S +S VWQP LA LKE FV A++ G+D+ + + V D D + + Y ++YY DMS A ++ + P+L + A DDPI+ + +P + +NLFF +++ GGHVG+P+GW P +W +M++ + F EA
Sbjct: 42 VKPGFYFAPTPRNAAVAAACPALAPGYYERQGTPWLWNGDFTTFFPFISMNCAPVNYRRRWIRA-GDG-------------------------------------------ERVATDWTFPAGGFDPEKPVVLILHGLNGGSDEAYILDMVPRLLERGWTCVVMISRGLMNTPIESGNCFNGARTSDVHAAVRMLQKSVGALGAPIAAVGFSMGGVVLSNYCGTYGDPEKRREVSGEVPPFGLEAAVNLSGCIDCVKN-SRCVYSRTVWQPFLAYQLKETFVGRFADLFASK---GLDVHEVVKGHVVDVTDFDRETIVKVYDYEDTDDYYRDMSLAYHDRVRHVAKPVLWLHATDDPIIDCDSFAPGIKAAAEGQENLFFAISKTGGHVGFPLGWWPVPRRWEYMTTATVQFVEA 409 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17925.4748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17925.4748.1 >prot_H-elongata_contig17925.4748.1 ID=prot_H-elongata_contig17925.4748.1|Name=mRNA_H-elongata_contig17925.4748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=386bp MVPALRYPHYEGTPWVIGGDLATIFPYLAFYLPAPTFIRRWLSVDADGSPback to top mRNA from alignment at H-elongata_contig17925:1425..6604+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17925.4748.1 ID=mRNA_H-elongata_contig17925.4748.1|Name=mRNA_H-elongata_contig17925.4748.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5180bp|location=Sequence derived from alignment at H-elongata_contig17925:1425..6604+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17925:1425..6604+ >mRNA_H-elongata_contig17925.4748.1 ID=mRNA_H-elongata_contig17925.4748.1|Name=mRNA_H-elongata_contig17925.4748.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2316bp|location=Sequence derived from alignment at H-elongata_contig17925:1425..6604+ (Himanthalia elongata Himel1 dioecious)back to top |