mRNA_H-elongata_contig17860.4716.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17860.4716.1
Unique NamemRNA_H-elongata_contig17860.4716.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: D7FMY7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY7_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 1.550e-139
Identity = 223/311 (71.70%), Postives = 259/311 (83.28%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFSENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERPTASDEGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQVCN 933
            WK RKAAY  V S++QQ  S     F DYA FLKGMVQDSNASCLD ALDA+LAF++ Y  A E   +LAPGIVAKGLSGRPGT++RAE VLLK MEVDTP+VV  VLL+GL++KKPKVPPACVGI+  A++LFGARAMP+K++K+ALPGM SHK+V VRQQGLAL AE+ISWCGE  LASV SELRSAQKTDLD +V EKATGSPRVPT YLRK+RP+ SDE    S+       FDPR+F++PVDIL KLPKTEFNQK+AATKWS+ILEGLNIA++MIG VPKLT GDYG++VQK+KRLGDHSHVQV +
Sbjct:  117 WKDRKAAYDQVLSLYQQAMSDDSDVFRDYAPFLKGMVQDSNASCLDAALDAVLAFADGYVKACEHAPELAPGIVAKGLSGRPGTVSRAEAVLLKFMEVDTPDVVAAVLLEGLSDKKPKVPPACVGILANAIQLFGARAMPLKDLKAALPGMISHKVVPVRQQGLALAAEIISWCGEPMLASVTSELRSAQKTDLDGLVKEKATGSPRVPTLYLRKDRPSESDEVGDESKGPAVEEVFDPREFIEPVDILSKLPKTEFNQKVAATKWSEILEGLNIAIEMIGDVPKLTAGDYGDMVQKLKRLGDHSHVQVAS 427          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A836C9S4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S4_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.620e-76
Identity = 148/320 (46.25%), Postives = 200/320 (62.50%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQA-FHDYAVFLKGMVQDSNASCLDVALDALLAFSENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP----------TASDEGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK A++ +   F   +  GD A F++YA FL   V DS+A+CLD A+DA+LA+++    A+     LA  I++KG S R  T  +AE  LLK MEVDTP VV   LL GL +KKPKVPPAC+  +T+A + FGA  +P+KE++  L G+  HK   VR   LAL  EL+ W G  PLA V+ ELRSAQK +++    +   G+ + P+ YLRK RP           A D+G    ++ P   AFD RD ++ VD+L +L KTEFN K+A  KWS+ + GL IA+D+IG VPKLT GDY + V++ + L DHSHV V
Sbjct:   87 WKVRKPAFEALTQCFTLAALVGDSAVFNEYAPFLSKAVGDSHAACLDAAMDAVLAYADAAPKATATAEALAGDIISKGFSARGTTPAKAEAALLKFMEVDTPEVVTLALLQGLNDKKPKVPPACLACITKAADAFGAATLPLKELRGKLKGVLEHKDTNVRTAALALVTELVKWVGVAPLAGVIDELRSAQKAEIEAATKDLVPGACK-PSVYLRKLRPKPKAAAAGGDAAEDDGDVEVDAAP---AFDARDMIEAVDLLERLKKTEFNAKMAEEKWSEKVAGLKIALDVIGDVPKLTSGDYHDFVKQARTLTDHSHVMV 402          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A2D4C1Y1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Y1_PYTIN)

HSP 1 Score: 207 bits (528), Expect = 1.060e-56
Identity = 122/319 (38.24%), Postives = 184/319 (57.68%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFSENYSNASEFTVDLAPGI----VAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP--TASDEGA----GTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK AY+ V +I +Q   + D       +F K M +D+NAS ++  + A+LA++   +    F   +  G+    V KG + RPGT+    E+++  +E    +  V  L++G  NKKPKVPPACV  + + L+ FG R +PI+ +K+ALP +    + GVR   L + AE+  W G   +  +VS LR AQ+T+ + +  E   G  + PT+++R  RP   A+  GA      S +   P A DPR+F + V++L KLPKTEF  KLA  KWS+ +EGL I +D++G+VPKL  GDY  LV  +K L + S+V +
Sbjct:  240 WKVRKEAYEHVKAICEQPGVRTDDVSPILDLFPK-MCEDANASAMEAGIQAVLAYT---TKVEPFFKGIVSGVMKRVVDKGFASRPGTVXLCXELVMAFIEAGAADDTVAALIEGTKNKKPKVPPACVSSILEGLKAFGPRVIPIQTVKAALPTLCESTVNGVRPVALNVIAEIHRWTGPTLVQDIVSNLRQAQQTEYESLTKEIVPGQAQ-PTKFVRGSRPPTVATARGAVRNSAASGAAMAPGAIDPREFAETVNLLEKLPKTEFRAKLAHPKWSEKVEGLKIILDLVGSVPKLANGDYYELVNTLKILSNDSNVNI 553          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A024G375_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G375_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.550e-56
Identity = 125/319 (39.18%), Postives = 181/319 (56.74%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFSENYSNASEFTV-DLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP------TASDEGAGTSESQ---PPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK AY+ +  I++      D A       L+ + QDSNAS LD  L A+ ++ EN ++     V  L  G++ KG SGRP TIT  E ++ KL+E       V  L++G  +KKPKVPPACV  + QAL+LFG R + I  +KSALP +    +  VR   L L  E+  W G V +  +VS LR AQ+T+ + +  +   GS + PT++++   P      +++     T +S+   P   A DPRDFVD V++  KL KTE+  K+ +TKW D +  L I +++IG VPKL  GDYG+LV  +K L   S+V +
Sbjct:  147 WKVRKEAYEKMDLIWKT-KPFDDSATSSLLCHLEKLCQDSNASALDAGLQAVTSYIENTNSLQNSIVPSLMKGVIDKGFSGRPTTITLCESLIPKLIENGATEETVQALIEGTKHKKPKVPPACVSSLLQALQLFGPRIISIPALKSALPSLCESTVNNVRPLALKLLVEIHRWTGPVVIQDIVSNLRHAQQTEYEALTKDVVPGSAQ-PTKHVKGMAPKGEIGKSSNTSRRNTIKSKSVLPETSAMDPRDFVDAVNLTEKLAKTEYKAKIGSTKWKDKVAALKIVLEVIGPVPKLANGDYGDLVATLKLLSQDSNVNI 463          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A3R7CJ93_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CJ93_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.800e-54
Identity = 116/324 (35.80%), Postives = 186/324 (57.41%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFS-----ENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP----------TASDEGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK  Y D+ + F+ G  +  +  +   +F K +V DSNA+ ++  L A+LA++     + ++NA    V   P +V KG SGRPG++  AEE++L+ + + +    +  LL+G  NKKPKVPP CV  + +  + FG R +P+  +K  L  +    +  VR   L L  E+  W G   +  +V+ LR AQ+T+ + M++E + G   VPTRY++ + P          T + +G  T+ +     +FDPR+F + V++L  LPKTEF  K+A  KWS+ +E L I +D++G+VPKL  GDYG+LVQ +K     ++V +
Sbjct:  156 WKVRKEVYDDLKAAFESG--RAIEGGNVTELFGK-LVDDSNAAAMECGLAAVLAYAVQVSPQQWNNAIVGRV--LPKVVDKGFSGRPGSVKLAEELVLEFVHLGSAEDTITALLEGTKNKKPKVPPLCVSSILECFKAFGPRVVPVVAVKKELKALCESTVNNVRPNALKLIGEMYRWTGPTLVQDIVATLRPAQQTEYEAMISEISPGQA-VPTRYVKGKEPKPAKSAATGSTKAGKGXATASAPAGGGSFDPREFAETVNLLDLLPKTEFKAKMALPKWSEKVEALKIILDIVGSVPKLATGDYGDLVQTLKLCTQDANVNI 473          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A024UFT9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFT9_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.570e-54
Identity = 118/322 (36.65%), Postives = 179/322 (55.59%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSS-KGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFS-----ENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP-------TASDEGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK  Y D+ + F+ G + +G      +  F    V DSNA+ ++  L A+LA++       ++NA    V   P ++ KG SGRPGT+  AEE++L+ + + +    +  LL+G  NKKPKVPP CV  + +  + FG R +P+  +K  L  +    +  VR   L L  EL  W G   +  +V+ LR AQ+T+ + M+ E   G   VPTRYL+ + P       T +  G G + ++     FDPR+F + V++L +LPKTE+  K+A  KWS+ +E L I +D IG+VPKL  GDY +LVQ +K     S+V +
Sbjct:  169 WKVRKEVYDDLKAAFECGRAIEGGNVTELFGKF----VDDSNAAAMECGLAAVLAYTVQASAHQWNNAIVGRV--MPKVIDKGFSGRPGTVKLAEELVLEFVHLGSAEDTITALLEGTKNKKPKVPPLCVNSILECFKAFGPRVVPVVAVKKELKALCESTVNNVRPTALKLIGELYRWTGPTLVQDIVASLRPAQQTEYEAMIHEITPGQA-VPTRYLKGKEPKPASATATKAGGGKGAATAKTDGGGFDPREFAETVNLLDRLPKTEYKAKMALPKWSEKVEALKIILDTIGSVPKLANGDYSDLVQTLKLCTQDSNVNI 483          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A6G0W9F2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9F2_9STRA)

HSP 1 Score: 199 bits (507), Expect = 6.450e-54
Identity = 117/320 (36.56%), Postives = 179/320 (55.94%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFS-----ENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERPTASDEGAGTSESQ------PPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WK+RK  Y+D+ + F+ G  +G +  +   +F K MV DSNA+ ++  L A+LA++     + ++NA    V   P +V K  SGRP T+  AEE++L+ + + +    V  LL+G  NKKPKVPP CV  + +  + +G R +P+  +K  L  +    +  VR   L L  E+  W G   +  +V+ LR AQ+T+ + M+ E   G    P R+L+ + P A+    G S         P P A DPR+F + V +  KLPKTEF  K+A  KWS+ +  LNI +++IG+VPKL  GDYG+LVQ +K     S+V +
Sbjct:  163 WKIRKEVYEDLKTAFETG--RGIEGGNVTELFGK-MVDDSNAAAMECGLAAVLAYALQVPPQQWNNAIVGRV--MPKVVDKCFSGRPSTVKLAEELVLEFVHLGSAEDTVNALLEGTKNKKPKVPPLCVNSILECFKTYGPRVVPVVAVKKELKSLCESTVNNVRPTALKLIGEMYRWTGPTLVQDIVASLRPAQQTEYENMIKEITPGQA-APLRFLKGKEPKAAPAKGGKSGGNDGGGGAPAPSAMDPREFAETVSLFDKLPKTEFKAKMALPKWSEKVGALNIILEIIGSVPKLANGDYGDLVQTLKLCTQDSNVNI 476          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: W4GH90_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GH90_9STRA)

HSP 1 Score: 199 bits (506), Expect = 8.810e-54
Identity = 114/324 (35.19%), Postives = 185/324 (57.10%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFS-----ENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERP----------TASDEGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK  Y D+ + F+ G  +  +  +   +F K +V DSNA+ ++  L A+LA++     + ++NA    V   P +V KG SGRPG++  AEE++L+ + + +    +  LL+G  NKKPKVPP CV  + +  + FG R +P+  +K  L  +    +  VR   L L  E+  W G   +  +V+ LR AQ+T+ + M++E + G   VPTRY++ + P          T + +G   + +     +FDPR+F + +++L  LPKTEF  K+A  KWS+ +E L I +D++G+VPKL  GDYG+LVQ +K     ++V +
Sbjct:  156 WKVRKEVYDDLKAAFESG--RAIEGGNVTELFGK-LVDDSNAAAMECGLAAVLAYAVQVSPQQWNNAIVGRV--LPKVVDKGFSGRPGSVKLAEELVLEFVHLGSAEDTITALLEGTKNKKPKVPPLCVSSILECFKAFGPRVVPVVAVKKELKALCESTVNNVRPNALKLIGEMYRWTGPTLVQDIVATLRPAQQTEYEAMISEISPGQA-VPTRYVKGKEPKPAKSAATGSTKAGKGGAAASAPAGGGSFDPREFAETINLLDLLPKTEFKAKMALPKWSEKVEALKIILDIVGSVPKLATGDYGDLVQTLKLCTQDANVNI 473          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A067D3P9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D3P9_SAPPC)

HSP 1 Score: 199 bits (505), Expect = 1.190e-53
Identity = 116/319 (36.36%), Postives = 178/319 (55.80%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFS-----ENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERPTASDE-----GAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WKVRK AY D+   F+ G  +G    +    F K MV DSNA+ ++  L A+LA++     + +SN+          ++ K  +GRPGT+  AEE++L+ +        +  L++G  NKKPK PP CV ++ +AL+ FG R +PI  +K+ALP +    +  VR   L +  EL  W G   +  +V+ LR AQKT+ ++++ +   G   V TRY++ + P A+       G   + + P     DPRDF + +D+L KLPKTEF  KLA  KWS+ +  L I +D +G+VPKL  GDYG+LV  +K     ++V +
Sbjct:  130 WKVRKEAYDDLKLAFETG--RGVDGGNPIEFFGK-MVDDSNAAAMEAGLAAVLAYTKEATPQQWSNS--VIARTMTKVIDKCFTGRPGTVKLAEELVLEYIHQGGAEDTIAALIEGTKNKKPKAPPLCVSLMLEALKTFGPRVVPIPPLKAALPALCESTVNNVRPTALKVICELYRWTGAPLIQDIVNGLRPAQKTEYEELIKDITPGQATV-TRYVKGKEPRAAPAPRGAPGRAAAAAAPVAATMDPRDFAETIDLLAKLPKTEFKAKLALPKWSEKVAALQIILDTVGSVPKLANGDYGDLVHTLKLCMQDANVNI 442          
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Match: A0A1W0ACM4_9STRA (Cytoskeleton-associated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACM4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.520e-53
Identity = 116/319 (36.36%), Postives = 175/319 (54.86%), Query Frame = 1
Query:    1 WKVRKAAYQDVHSIF--QQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALDALLAFSENYSN---ASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDTPNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPGMFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTEKATGSPRVPTRYLRKERPTASD-----EGAGTSESQPPPVAFDPRDFVDPVDILFKLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKRLGDHSHVQV 927
            WK+RK  Y+ + + F  QQG   G+       +F K MV DSNA+ ++  L A+LA+++  S+   ++       P ++ K  +GRPGT+  AEE++L+ +        +  LL+G  NKKPKVPP C+  + +  + FG R +PI  +KS LP +    +  VR   + L  E+  W G   LA +V+ LR AQKT+ ++ + +   G   V TRY++   P A+       G       P     DPRDF + VD+L KLPKTEF  KLA  KWS+ +  L I ++ +G+VPKL  GDYG+LVQ +K     ++V +
Sbjct:  137 WKIRKEVYEVMKTAFETQQGVDGGNVT----ELFGK-MVDDSNAAAMEAGLAAVLAYTKEASSKQWSNSVIARTMPKVIDKCFAGRPGTVKLAEELVLEYVHQGGAEDTIAALLEGTKNKKPKVPPLCINSILECFKTFGPRVIPIPPLKSTLPALCESTVNNVRPAAMKLICEIYRWTGPALLADIVNGLRPAQKTEYEESIKDITPGQATV-TRYVKGMEPKAAPTRPGARGGAXXXXXPAAATMDPRDFAETVDLLAKLPKTEFKAKLALPKWSEKVAALTIIIETVGSVPKLANGDYGDLVQTLKLCMQDANVNI 449          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17860.4716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMY7_ECTSI1.550e-13971.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9S4_9STRA1.620e-7646.25Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A2D4C1Y1_PYTIN1.060e-5638.24Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A024G375_9STRA2.550e-5639.18Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A3R7CJ93_9STRA1.800e-5435.80Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A024UFT9_9STRA2.570e-5436.65Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0W9F2_9STRA6.450e-5436.56Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GH90_9STRA8.810e-5435.19Uncharacterized protein n=13 Tax=Aphanomyces astac... [more]
A0A067D3P9_SAPPC1.190e-5336.36Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0ACM4_9STRA1.520e-5336.36Cytoskeleton-associated protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17860contigH-elongata_contig17860:225..2496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.1
Seed ortholog evalue1.7e-123
Seed eggNOG ortholog2880.D7FMY7
Preferred nameCKAP5
KEGG koko:K11664,ko:K16803
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000086,GO:0000132,GO:0000212,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000578,GO:0000741,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000911,GO:0000919,GO:0000922,GO:0000940,GO:0000942,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005816,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005886,GO:0005911,GO:0005938,GO:0006403,GO:0006810,GO:0006886,GO:0006928,GO:0006935,GO:0006996,GO:0006997,GO:0007010,GO:0007017,GO:0007018,GO:0007019,GO:0007020,GO:0007029,GO:0007030,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0007098,GO:0007143,GO:0007163,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007338,GO:0007344,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007399,GO:0007405,GO:0007409,GO:0007411,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008283,GO:0008298,GO:0008356,GO:0008358,GO:0008360,GO:0008595,GO:0008608,GO:0009506,GO:0009524,GO:0009566,GO:0009574,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009798,GO:0009832,GO:0009880,GO:0009920,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010256,GO:0010389,GO:0010564,GO:0010638,GO:0010968,GO:0010970,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016325,GO:0016740,GO:0017145,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030010,GO:0030030,GO:0030031,GO:0030054,GO:0030139,GO:0030154,GO:0030182,GO:0030705,GO:0030863,GO:0030951,GO:0030952,GO:0030981,GO:0031023,GO:0031109,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031175,GO:0031334,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032886,GO:0032984,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034501,GO:0034502,GO:0034613,GO:0034622,GO:0035282,GO:0035371,GO:0036445,GO:0040001,GO:0040011,GO:0042221,GO:0042330,GO:0042546,GO:0042886,GO:0043021,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044454,GO:0044464,GO:0044703,GO:0044732,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0044877,GO:0045165,GO:0045184,GO:0045196,GO:0045450,GO:0046785,GO:0046907,GO:0048103,GO:0048284,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048522,GO:0048599,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050000,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051010,GO:0051128,GO:0051130,GO:0051179,GO:0051225,GO:0051231,GO:0051234,GO:0051236,GO:0051258,GO:0051261,GO:0051276,GO:0051293,GO:0051294,GO:0051298,GO:0051301,GO:0051303,GO:0051310,GO:0051315,GO:0051321,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0055044,GO:0055057,GO:0055059,GO:0060271,GO:0060810,GO:0060811,GO:0061351,GO:0061564,GO:0061640,GO:0061863,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070199,GO:0070462,GO:0070507,GO:0070727,GO:0070840,GO:0070850,GO:0070925,GO:0071459,GO:0071554,GO:0071669,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071963,GO:0072089,GO:0072594,GO:0072686,GO:0072687,GO:0090063,GO:0090307,GO:0097427,GO:0097435,GO:0097485,GO:0097708,GO:0097711,GO:0098687,GO:0098722,GO:0098813,GO:0098840,GO:0099070,GO:0099080,GO:0099081,GO:0099111,GO:0099118,GO:0099512,GO:0099513,GO:0099568,GO:0120031,GO:0120036,GO:0120039,GO:0140013,GO:0140014,GO:0140056,GO:0140096,GO:0140210,GO:1901987,GO:1901990,GO:1902410,GO:1902749,GO:1902850,GO:1902903,GO:1902905,GO:1903046,GO:1903047,GO:1904511,GO:1990498,GO:1990752
EggNOG free text desc.microtubule plus end polymerase
EggNOG OGsKOG1820@1,KOG1820@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size936
Cds size936
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17860.4716.1prot_H-elongata_contig17860.4716.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17860 225..2496 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930031.2641437-CDS-H-elongata_contig17860:224..4251622930031.2641437-CDS-H-elongata_contig17860:224..425Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 225..425 -
1691679253.8385813-CDS-H-elongata_contig17860:224..4251691679253.8385813-CDS-H-elongata_contig17860:224..425Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 225..425 -
1622930031.2818427-CDS-H-elongata_contig17860:849..9341622930031.2818427-CDS-H-elongata_contig17860:849..934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 850..934 -
1691679253.851115-CDS-H-elongata_contig17860:849..9341691679253.851115-CDS-H-elongata_contig17860:849..934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 850..934 -
1622930031.2991562-CDS-H-elongata_contig17860:1109..13111622930031.2991562-CDS-H-elongata_contig17860:1109..1311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1110..1311 -
1691679253.8599207-CDS-H-elongata_contig17860:1109..13111691679253.8599207-CDS-H-elongata_contig17860:1109..1311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1110..1311 -
1622930031.3139594-CDS-H-elongata_contig17860:1527..16841622930031.3139594-CDS-H-elongata_contig17860:1527..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1528..1684 -
1691679253.8698747-CDS-H-elongata_contig17860:1527..16841691679253.8698747-CDS-H-elongata_contig17860:1527..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1528..1684 -
1622930031.3264205-CDS-H-elongata_contig17860:1910..21131622930031.3264205-CDS-H-elongata_contig17860:1910..2113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1911..2113 -
1691679253.8774304-CDS-H-elongata_contig17860:1910..21131691679253.8774304-CDS-H-elongata_contig17860:1910..2113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 1911..2113 -
1622930031.3382833-CDS-H-elongata_contig17860:2408..24961622930031.3382833-CDS-H-elongata_contig17860:2408..2496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 2409..2496 -
1691679253.8863814-CDS-H-elongata_contig17860:2408..24961691679253.8863814-CDS-H-elongata_contig17860:2408..2496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17860 2409..2496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17860.4716.1

>prot_H-elongata_contig17860.4716.1 ID=prot_H-elongata_contig17860.4716.1|Name=mRNA_H-elongata_contig17860.4716.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bp
WKVRKAAYQDVHSIFQQGSSKGDQAFHDYAVFLKGMVQDSNASCLDVALD
ALLAFSENYSNASEFTVDLAPGIVAKGLSGRPGTITRAEEVLLKLMEVDT
PNVVVGVLLDGLANKKPKVPPACVGIVTQALELFGARAMPIKEIKSALPG
MFSHKIVGVRQQGLALTAELISWCGEVPLASVVSELRSAQKTDLDKMVTE
KATGSPRVPTRYLRKERPTASDEGAGTSESQPPPVAFDPRDFVDPVDILF
KLPKTEFNQKLAATKWSDILEGLNIAVDMIGAVPKLTPGDYGNLVQKVKR
LGDHSHVQVCN*
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mRNA from alignment at H-elongata_contig17860:225..2496-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17860.4716.1 ID=mRNA_H-elongata_contig17860.4716.1|Name=mRNA_H-elongata_contig17860.4716.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2272bp|location=Sequence derived from alignment at H-elongata_contig17860:225..2496- (Himanthalia elongata Himel1 dioecious)
TGGAAGGTGCGGAAGGCGGCGTACCAAGATGTGCATTCCATATTTCAGCA AGGTTCATCTAAAGGCGACCAAGCCTTCCATGACTATGGTATGTGTCGAG TCGTACCAGATGTTCAGTATATTCCTTGCTGCACTGGTCCATAACGTTTG GGAAGCTCTCATGGCGAGTTCACCGCTAAACGGTTCGTAAATTAGTTCGT TTTCCGAATACTCCGTATCGCATCCCCAACGTTTTGTGCGAATTGCCTAA AAGACGCTCCGGTAATACGTTATAAAAAATATATTGAGATGGAAAGTAAA AACTTAAAAAGTGAATCGCCGGCACTTCCCTCCTCTGCCCTTGCTTTGTT TTCCTTCTCCTCAAATTATTTCTTGGATTCCAGCTGTATTTCTAAAGGGA ATGGTTCAAGATTCGAACGCATCCTGCCTTGATGTGGCTCTGGATGCTCT TCTCGCCTTTTCGGAGAACTACAGCAACGCCAGCGAGTTCACTGTGGACC TGGCTCCAGGAATTGTAGCAAAAGGTTTGAGCGGCCGGCCTGGCACCATC ACGAGAGCGGAGGAAGTTCTCCTCAAACTAATGGAGGTAATATGTACCGG TATATGTATACATAACAAAATATTTGACCCATCACCACTATAAAGTGACG AAATACTTTATAGTAGGGTGAAGTCTCTTTGTTATCATATTTATAGCGCC TCTCTGTTATCAGTTAGTTCGTTAGTTCGCTACCCTGTCATCTACCCAAT CGCTAATGCCCTCGTTCCATCGCGTCATTGCTTCATTGCTTCATTGCTTC ATTGCTTCATAGGTCGATACTCCAAACGTGGTGGTAGGCGTGTTGCTGGA TGGCCTCGCTAACAAAAAGCCCAAGGTCCCACCTGCTTGCGTGGGTATCG TGACTCAGGCGCTCGAGCTATTCGGAGCTAGAGCAATGCCTATAAAGGAA ATCAAGTCAGCTCTGCCAGGTGCCGAGCAATCACATTCGTCTTAGTACTA AGCAATCACATTCGTCGTAGTACTAAGCAATCACATCCATCCTGCTCGAA ATAATAAGTACCTCGTACATTTTACCTCTCTCTTCCCCTTCTTGATGTTG GTTGGTCATTATTCATTGGTCGGTCATTGGTTATTATTCATCGGTCATTA TTCATTGGTCGTGGTATATTACTCGTCACTCGCAGGAATGTTCTCGCACA AGATCGTTGGTGTTCGCCAGCAAGGGCTTGCTCTCACGGCTGAGCTCATT AGCTGGTGTGGTGAGGTTCCGCTGGCGTCCGTCGTGTCAGAACTTCGATC CGCTCAAAAAACTGATCTCGACAAGATGGTGACAGAAAAAGCCACGGGAT CTCCACGCGTACCCACACGTTATCTGAGAAAAGAGCGGTGAGATTATGTG ATAAGAGGGGGATGTCGTGTTTTTACATGGGCTGTGATGGATGTTTGTAT CTATCTGATGACATCGTGCCGCGACAATCAATACCATTAATGCCATCAAT AATGAATAGCTACCCTTCTGTGCAACGTGACCTCTAACGTTTTTTACTGC AACCTCTAACAGACCAACAGCGTCGGACGAGGGAGCAGGAACATCGGAGA GCCAACCGCCGCCGGTAGCGTTCGATCCTCGAGATTTCGTCGATCCGGTA AAAAATATTTGCTGCAGTGTCTGTGTTTCTGTTAAACGGAATACGAATTT GAAAATTTAAGTGTATACTGTTGTTGTTGTTTCTCACATTCAGCGCATTG GTTGCNNNNNNNNNNGCCAACCCGAAAAAAATACTTTACACGGTGGCCAA TCCCGCTCGTGGTCTGCTGAACAGGGAAAAAAAGAAAAAGTCTGGCAGCG CACCCCCATCCCTCCGCGCGCTGCTCGTTCGGGGAAAAATCAAATCAAAT CACGTGACGTAAATAGCGGATAGCCAGTGGAACATTACATCAGCGTATTC CTCGTTCATTTTATGACGAGTGACTAAATTAATGTAAGATGTAAGGATGT AAGATTTGATAATATTGGATTAGATATAACTTTGCTAAGGATGTTTCGTT TACGATGCGATTTATGGCCAGGTTGACATCCTTTTCAAGCTTCCGAAGAC GGAATTCAATCAGAAACTGGCCGCCACCAAATGGAGCGATATCTTAGAGG GTCTTAACATAGCCGTTGATATGATTGGTGCCGTTCCTAAGCTGACTCCC GGTGACTACGGTAACTTAGTCCAGAAAGTCAAGCGCCTCGGAGATCACTC CCATGTTCAGGTATGTAATTGA
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Coding sequence (CDS) from alignment at H-elongata_contig17860:225..2496-

>mRNA_H-elongata_contig17860.4716.1 ID=mRNA_H-elongata_contig17860.4716.1|Name=mRNA_H-elongata_contig17860.4716.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1872bp|location=Sequence derived from alignment at H-elongata_contig17860:225..2496- (Himanthalia elongata Himel1 dioecious)
TGGAAGGTGCGGAAGGCGGCGTACCAAGATGTGCATTCCATATTTCAGCA
AGGTTCATCTAAAGGCGACCAAGCCTTCCATGACTATGTGGAAGGTGCGG
AAGGCGGCGTACCAAGATGTGCATTCCATATTTCAGCAAGGTTCATCTAA
AGGCGACCAAGCCTTCCATGACTATGCTGTATTTCTAAAGGGAATGGTTC
AAGATTCGAACGCATCCTGCCTTGATGTGGCTCTGGATGCTCTTCTCGCC
TTTTCGGAGAACTACAGCAACGCCAGCGAGTTCACTGTGGACCTGGCTCC
AGGAATTGTAGCAAAAGGTTTGAGCGGCCGGCCTGGCACCATCACGAGAG
CGGAGGAAGTTCTCCTCAAACTAATGGAGCTGTATTTCTAAAGGGAATGG
TTCAAGATTCGAACGCATCCTGCCTTGATGTGGCTCTGGATGCTCTTCTC
GCCTTTTCGGAGAACTACAGCAACGCCAGCGAGTTCACTGTGGACCTGGC
TCCAGGAATTGTAGCAAAAGGTTTGAGCGGCCGGCCTGGCACCATCACGA
GAGCGGAGGAAGTTCTCCTCAAACTAATGGAGGTCGATACTCCAAACGTG
GTGGTAGGCGTGTTGCTGGATGGCCTCGCTAACAAAAAGCCCAAGGTCCC
ACCTGCTTGCGTGGGTATCGTGACTCAGGCGCTCGAGCTATTCGGAGCTA
GAGCAATGCCTATAAAGGAAATCAAGTCAGCTCTGCCAGGTCGATACTCC
AAACGTGGTGGTAGGCGTGTTGCTGGATGGCCTCGCTAACAAAAAGCCCA
AGGTCCCACCTGCTTGCGTGGGTATCGTGACTCAGGCGCTCGAGCTATTC
GGAGCTAGAGCAATGCCTATAAAGGAAATCAAGTCAGCTCTGCCAGGAAT
GTTCTCGCACAAGATCGTTGGTGTTCGCCAGCAAGGGCTTGCTCTCACGG
CTGAGCTCATTAGCTGGTGTGGTGAGGTTCCGCTGGCGTCCGTCGTGTCA
GAACTTCGATCCGCTCAAAAAACTGATCTCGACAAGATGGTGACAGAAAA
AGCCACGGGATCTCCACGCGTACCCACACGTTATCTGAGAAAAGAGCGGA
ATGTTCTCGCACAAGATCGTTGGTGTTCGCCAGCAAGGGCTTGCTCTCAC
GGCTGAGCTCATTAGCTGGTGTGGTGAGGTTCCGCTGGCGTCCGTCGTGT
CAGAACTTCGATCCGCTCAAAAAACTGATCTCGACAAGATGGTGACAGAA
AAAGCCACGGGATCTCCACGCGTACCCACACGTTATCTGAGAAAAGAGCG
ACCAACAGCGTCGGACGAGGGAGCAGGAACATCGGAGAGCCAACCGCCGC
CGGTAGCGTTCGATCCTCGAGATTTCGTCGATCCGACCAACAGCGTCGGA
CGAGGGAGCAGGAACATCGGAGAGCCAACCGCCGCCGGTAGCGTTCGATC
CTCGAGATTTCGTCGATCCGGTTGACATCCTTTTCAAGCTTCCGAAGACG
GAATTCAATCAGAAACTGGCCGCCACCAAATGGAGCGATATCTTAGAGGG
TCTTAACATAGCCGTTGATATGATTGGTGCCGTTCCTAAGCTGACTCCCG
GTGACTACGGTAACTTAGTCCAGAAAGTCAAGCGCCTCGGAGATCACTCC
CATGTTCAGGTATGTAATTGAGTTGACATCCTTTTCAAGCTTCCGAAGAC
GGAATTCAATCAGAAACTGGCCGCCACCAAATGGAGCGATATCTTAGAGG
GTCTTAACATAGCCGTTGATATGATTGGTGCCGTTCCTAAGCTGACTCCC
GGTGACTACGGTAACTTAGTCCAGAAAGTCAAGCGCCTCGGAGATCACTC
CCATGTTCAGGTATGTAATTGA
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