mRNA_H-elongata_contig17856.4711.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17856.4711.1
Unique NamemRNA_H-elongata_contig17856.4711.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 5.740e-77
Identity = 194/400 (48.50%), Postives = 235/400 (58.75%), Query Frame = 2 
Query:  863 QEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQNTQASSAPILSAVRRAVPARAALA--ATAMAVARSTLGEETTAGHLCPPPE-----VKIFVTRVAFDRSKVQVCGCALDEYHGKIITRFWLVNTWRVVSLSTTPARFGSLSHAHQAEQQALRERVDLPIRQAVDSTETAPEGRGRNGRGGKCSR-GRAP---VPSGTAINWIDALGTGRGAGRGGGDDASVQAEVALSATGRMQGAVSKGVLTPRMRSRLCRALLLEAAERVARLIPAGVAPLGDRDLAAFDVGRGGTSVSKDEVEGGGKAGEAEDMEEMSPPPARSYWRLKRSCESYRIRRSEMLLTATFGSWLVGSRRQQEFAVDER-GYVPLA 2026
            +EQ +GALRIKSSRSNISEEGRTMSMSCSDKLAKWA LG+QGGLL+SWVEP+FLSSIV+SA  +      AP+ SA+ RA+P RAALA   ++      T+G E    H   P E     + +FV+ V F RSK Q      D+  G   +   + +   +     T +   +      A   A   R  +P        ET+   R  N   GK SR  R P   VPSGT++NWI+ LGTGRG G GGGD A +QAEV LSATGRMQGAVSKGVLT R RSRLCRA LLEAA  VAR      AP+ D   +  +    GT    + V+    AGE     E      RSYWRLK++  +YR+RR  ML T TF +WLVG + +Q FAVDER G V LA
Sbjct:  319 EEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWVEPIFLSSIVISADPRTD--GPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMAVFVSEVTFARSKAQSEQRVFDD-EGSCSSTSGVGSPGSITPAKATVSSVKASPSIADASIAAGSARQRMPGDNDRSGRETSQGTRSDNSIIGKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDTARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAANLVARAYLPQRAPMCDHHYSDIE----GTGEETETVQ----AGEGASGSEGPESGGRSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVLLA 707
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.360e-14
Identity = 51/141 (36.17%), Postives = 71/141 (50.35%), Query Frame = 1 
Query:    1 LRVMTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELELVIPKSGRSPSCRHPPCETDEERSRADAEMITALPPPISWGIKAEPPLYVDVPLDGNRALLLLEPTDQGAWRLKSSLRLHLYVSDPPCGDASIY 423
            L V+ LATG KC+G+ K+P DGS+VHDSHAEVLARR L+  L + L   + ++G S          D+ R+  ++  +                                    +G +RL+   RLHLY+S+PPCGDASIY
Sbjct:   19 LAVIALATGTKCMGQSKLPPDGSIVHDSHAEVLARRCLVRLLGEHLRAALTRAGGS----------DDSRNFLESTGV------------------------------------EGRFRLRRGHRLHLYISEPPCGDASIY 113
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A2P4XLQ8_9STRA (tRNA-specific adenosine deaminase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLQ8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.320e-12
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 2 
Query:  701 SGTSDGRPRPDKMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQ 1054
            SG +D +    ++  TGAK     ++  A  ++ + AD+                 QA+G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FLSSIVVS   Q
Sbjct:  174 SGQADDQSERSELRLTGAKAHKRSRDVDAQCDQDSPADKKFA--------------QAVGIARMKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIVVSGDDQ 277
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: K0R2A8_THAOC (A to I editase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2A8_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 3.420e-12
Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 2 
Query:  734 KMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSW-VEPVFLSSIVVS 1042
            ++ FTGAKI+ +  E        ++ + P+G   E+ +R+ REQ Q +  LR+KSSRSNI  + R+MS+ C+DK+ +W+V GLQG LLS + +EP+ L+SI VS
Sbjct:  193 EVNFTGAKIILSGGEEHQTTNITSLQEEPEG---EVKVRLGREQVQIVKKLRVKSSRSNIPNKMRSMSLCCADKIVRWSVFGLQGALLSKFLIEPITLTSICVS 293
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A7S0N650_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N650_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 5.260e-12
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 2 
Query:  872 ALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQNTQASSAPILSAVRRAVPARAALAATAMAVARSTLGE 1165
            ++G +R K  RS++    RT+S+SCSDK+ +WAVLGLQGG LS WV PV L S+VVSA   +  ASS  + +A+RR++  R+ LAA A A  R+  GE
Sbjct:    1 SIGGVRTKPGRSDVPPARRTLSVSCSDKICRWAVLGLQGGALSRWVAPVPLHSVVVSA---DPAASSQALAAALRRSLAQRS-LAAAAGARVRAWWGE 94
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: L1J7A1_GUITC (A to I editase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7A1_GUITC)

HSP 1 Score: 74.7 bits (182), Expect = 9.560e-12
Identity = 53/147 (36.05%), Postives = 70/147 (47.62%), Query Frame = 1 
Query:    4 RVMTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELELVIPKSGRSPSCRHPPCETDEERSRADAEMITALPPPISWGIKAEPPLYVDVPLDGNRALLLLEPT---DQGA---WRLKSSLRLHLYVSDPPCGDASIYE 426
            R+++LATGNKC+G  K+  DG V++DSHAEVLARRA M  L+ ++EL                                                    L+ +R L LL+ +   DQGA    RLK + +LHLYVS  PCGDAS +E
Sbjct:   78 RLLSLATGNKCLGASKLRGDGRVLNDSHAEVLARRAFMSFLYSQVELF---------------------------------------------------LEDDRHLCLLDRSSKLDQGAASRLRLKHACQLHLYVSQAPCGDASNFE 173
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BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A833X2Q8_PHYIN (Adenosine-deaminase (Editase) domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X2Q8_PHYIN)

HSP 1 Score: 78.6 bits (192), Expect = 1.070e-11
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  845 LRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 1042
            L+ D++  QA+G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FLSSI+VS
Sbjct:  194 LQPDKKFAQAVGIARVKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIIVS 259
[Close]
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A662WKZ4_9STRA (A to I editase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKZ4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.320e-11
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 2 
Query:  737 MTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVV 1039
            +  TGAK  A  + RG+              AGE     ++  EQ +G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FL SIVV
Sbjct:  458 LRLTGAKAHAGKRSRGSES------------AGEQEEPPEKRFEQTMGLARVKSGRSDLPVEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLRSIVV 546
[Close]
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A329S331_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S331_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.720e-11
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2 
Query:  851 IDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 1042
            +D++  QA+G  R+KS RS++  E +T+SMSCSDKLA+W  LGLQG LL  W EP+FLSSI+VS
Sbjct:  202 LDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVS 265
[Close]
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: I0YYL1_COCSC (A to I editase domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YYL1_COCSC)

HSP 1 Score: 77.8 bits (190), Expect = 2.660e-11
Identity = 52/162 (32.10%), Postives = 78/162 (48.15%), Query Frame = 1 
Query:    1 LRVMTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELELVIPKSGRSPSCRHPPCETDEERSRADAEMITALPPPISWGIKAEPPLYVDVPLDGNRALLLLEPTDQGAWRLKSSLRLHLYVSDPPCGDASIYEQQREGKEEDEYDFLPCLRWR 486
            + V+++ TG KC+G  K    G V++DSHAEV+ARRAL+  L+ E+E V             P E+ EE   +D  ++ A   P   G +        +         L E T  G +R +   +LH+++S PPCGDA I+  Q     + E+      RWR
Sbjct:   66 MHVVSIGTGTKCLGFSKRSTSGEVLNDSHAEVVARRALLRWLYTEVETV-------------PSESAEE---SDEPVLRATLRPQFLGQEHSSKAGKALATQRRVHWPLFERTASGTYRRRGRWQLHMFISQPPCGDACIFANQAPFGTDSEHP--KATRWR 209
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI40_ECTSI5.740e-7748.50A to I editase domain-containing protein n=2 Tax=E... [more]
A0A835ZEK1_9STRA3.360e-1436.17A to I editase domain-containing protein n=1 Tax=T... [more]
A0A2P4XLQ8_9STRA2.320e-1242.37tRNA-specific adenosine deaminase n=2 Tax=Phytopht... [more]
K0R2A8_THAOC3.420e-1244.23A to I editase domain-containing protein n=1 Tax=T... [more]
A0A7S0N650_9CHLO5.260e-1250.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
L1J7A1_GUITC9.560e-1236.05A to I editase domain-containing protein n=1 Tax=G... [more]
A0A833X2Q8_PHYIN1.070e-1160.61Adenosine-deaminase (Editase) domain n=1 Tax=Phyto... [more]
A0A662WKZ4_9STRA1.320e-1146.53A to I editase domain-containing protein n=1 Tax=N... [more]
A0A329S331_9STRA1.720e-1159.38A to I editase domain-containing protein n=1 Tax=P... [more]
I0YYL1_COCSC2.660e-1132.10A to I editase domain-containing protein n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17856contigH-elongata_contig17856:2171..6877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.3
Seed ortholog evalue4.6e-73
Seed eggNOG ortholog2880.D8LI40
KEGG rclassRC00477
KEGG koko:K12968,ko:K15440
KEGG ReactionR10231
KEGG Pathwayko04623,ko05162,ko05164,map04623,map05162,map05164
EggNOG free text desc.adenosine deaminase activity
EggNOG OGsKOG2777@1,KOG2777@2759
EC3.5.4.34,3.5.4.37
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAdenosine deaminase/editase
Ec32 orthologEc-04_003130.1
Exons6
Model size2032
Cds size1611
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.9480298-CDS-H-elongata_contig17856:2170..25311622930030.9480298-CDS-H-elongata_contig17856:2170..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 2171..2531 -
1691679253.7277145-CDS-H-elongata_contig17856:2170..25311691679253.7277145-CDS-H-elongata_contig17856:2170..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 2171..2531 -
1622930030.971762-CDS-H-elongata_contig17856:2911..33221622930030.971762-CDS-H-elongata_contig17856:2911..3322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 2912..3322 -
1691679253.7397923-CDS-H-elongata_contig17856:2911..33221691679253.7397923-CDS-H-elongata_contig17856:2911..3322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 2912..3322 -
1622930030.9890952-CDS-H-elongata_contig17856:3836..41111622930030.9890952-CDS-H-elongata_contig17856:3836..4111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 3837..4111 -
1691679253.7510004-CDS-H-elongata_contig17856:3836..41111691679253.7510004-CDS-H-elongata_contig17856:3836..4111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 3837..4111 -
1622930031.0083053-CDS-H-elongata_contig17856:4525..50441622930031.0083053-CDS-H-elongata_contig17856:4525..5044Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 4526..5044 -
1691679253.7591586-CDS-H-elongata_contig17856:4525..50441691679253.7591586-CDS-H-elongata_contig17856:4525..5044Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 4526..5044 -
1622930031.0249074-CDS-H-elongata_contig17856:5313..53581622930031.0249074-CDS-H-elongata_contig17856:5313..5358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 5314..5358 -
1691679253.7675076-CDS-H-elongata_contig17856:5313..53581691679253.7675076-CDS-H-elongata_contig17856:5313..5358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17856 5314..5358 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930031.0407295-UTR-H-elongata_contig17856:5358..56861622930031.0407295-UTR-H-elongata_contig17856:5358..5686Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17856 5359..5686 -
1691679253.7765243-UTR-H-elongata_contig17856:5358..56861691679253.7765243-UTR-H-elongata_contig17856:5358..5686Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17856 5359..5686 -
1622930031.0560822-UTR-H-elongata_contig17856:6784..68771622930031.0560822-UTR-H-elongata_contig17856:6784..6877Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17856 6785..6877 -
1691679253.7859104-UTR-H-elongata_contig17856:6784..68771691679253.7859104-UTR-H-elongata_contig17856:6784..6877Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17856 6785..6877 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17856.4711.1prot_H-elongata_contig17856.4711.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17856 2171..5358 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17856.4711.1

>prot_H-elongata_contig17856.4711.1 ID=prot_H-elongata_contig17856.4711.1|Name=mRNA_H-elongata_contig17856.4711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=537bp
MSNNGRGRRRMNMISFHACGGGGDNGGDSKTETAASPRGEERGSGGRTKK
RYRCNGLNCSVAYSPCSSPFFRCSCTDLRPVEHAHGGGEERCLSGTSDGR
PRPDKMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQ
ALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVF
LSSIVVSASSQNTQASSAPILSAVRRAVPARAALAATAMAVARSTLGEET
TAGHLCPPPEVKIFVTRVAFDRSKVQVCGCALDEYHGKIITRFWLVNTWR
VVSLSTTPARFGSLSHAHQAEQQALRERVDLPIRQAVDSTETAPEGRGRN
GRGGKCSRGRAPVPSGTAINWIDALGTGRGAGRGGGDDASVQAEVALSAT
GRMQGAVSKGVLTPRMRSRLCRALLLEAAERVARLIPAGVAPLGDRDLAA
FDVGRGGTSVSKDEVEGGGKAGEAEDMEEMSPPPARSYWRLKRSCESYRI
RRSEMLLTATFGSWLVGSRRQQEFAVDERGYVPLAN*
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mRNA from alignment at H-elongata_contig17856:2171..6877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17856.4711.1 ID=mRNA_H-elongata_contig17856.4711.1|Name=mRNA_H-elongata_contig17856.4711.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4707bp|location=Sequence derived from alignment at H-elongata_contig17856:2171..6877- (Himanthalia elongata Himel1 dioecious)
CTGCGCGTGATGACCCTAGCGACGGGTAACAAGTGCGTCGGACGGGACAA
GATCCCCGAGGACGGATCGGTCGTTCACGACTCCCACGCAGAGGTATGAA
GAAGGCCTTAGCAAGGCTTAGCTCTCTGACGAAGAAAGGCAATCGACGGG
GCAGTTTTGCGTCGCAGTGCTGTTAGCTTTGTCTGTCCGTCGGTCCGTCA
GTCTGTTCGTGGGAGCAAGATATATCCTGTAGAACAAATCAAAGCAAAAC
AAACACCAAGACAAGCCATACCATACCATACCAAACCTTCGAAATAGCCT
TGCAAACAAGTCTTGCCTTACGTTAAAATGAATAAAAAAGGGGCGCTTCC
CAGAAGCAGGTTGTTGAGTAGACTCCTTCTTGAATCTAAGGAGCGTCGAC
AGATCTTAAGCCCGGACTACTCGTCTGGATCGGCCTCGGTCGGACCACCC
CCGTTTCGGGCAAGTCGATTGACAGCAGCGTCGTGTTGACCCCTTTATAT
TAGGTATTACCGCGACCTTATTGTTGAGGGTGCGTGTGACTTCCTCGTGG
ACTTCATCGGGCATCTGGGAAGCAGCGCTTTCTACACCCCTGTTGTTGGT
GTCCTCTGGTGCATCTCCTCGTCAAGTGTCTCGATGTCAATTGTCTCGAT
GCGTCCTCGTTGACTCCGTGACTGTGTGTGTGTGGTAGGCTGGCTCTATG
ACGCTTTTTAATTTTATTTTCTTCTAGGAGTGAGTAGAACGAGGCAGCGA
CCACCCTCCCTTTCCCTTCCGCCCGATCGAATCCAACGGACAAAATGAAA
ATATAATCCGGATTTATTACACGAAAGCTCTCAAATGATATGAATATATT
CAAAATCCCCCCCCCCCCTTGAAATAACAGGTATATCAAAAGAACGTACC
GTTTATGTCCGAGTCTCAGCCAACATTGTCAATCGTGTCGGGAGCAATAT
CACACAAACACACACAAGGCAAGTCGCTCGCTATGCTTGTGGCACCACAG
TTTGTTTTTCTTCGAAAAACAATTCACCTCGATATTCGCTTGATTCGCTA
CAGATTTGACGCTTGCAAAATCGTTCGCGAGGCTCGAGCCGCGCCGTACG
CAGTCTCCGTGTCATAGCATTTACTTTGTGCTTCACCTCTTTATGCCCCC
CCCCTCCCACACTCTGTTATACATGCGTATGCCCCGGACAGGTGCTCGCT
CGCAGAGCGCTTATGCTACGGCTTTGGAAAGAGCTCGAGCTCGTGATACC
CAAATCCGGGCGAAGTCCCTCTTGCCGCCATCCTCCCTGCGAGACCGACG
AGGAGCGTTCTCGCGCCGACGCAGAAATGATCACGGCTTTGCCCCCGCCG
ATTTCTTGGGGGATCAAGGCCGAGCCTCCCCTCTACGTCGACGTGCCCTT
GGACGGCAACCGCGCGCTGCTCCTGCTGGAGCCGACCGACCAAGGCGCGT
GGAGGCTGAAGTCGTCCCTCCGCCTGCACTTGTACGTGAGCGACCCGCCA
TGCGGGGACGCGTCGATCTATGAGCAACAACGGGAGGGGAAGGAGGAGGA
TGAATATGATTTCCGTCGTGGGCCGCGGCGATCGCCTTCCGAGCTTGATA
TTACTCCCGCCGGAGGAGCGTCGGCGTCTTCTTGCGGAGGCGTCGAAGCC
GTAGAGATCGCGAAAGAAGCCACCGCCGCGCGCTCGGAGATAAATCGATT
CGCGGTTGAAGCATCTGCAGCGGGGCGTCTTCTTGGCGACCCCACGATCG
GGGTTGCGATCGCATCCAGGAAAAGCCTCGGGGCGGAGACGAGTCAGGAG
GGGAGTAGTGGATGCGGTGAATCGGGGGAGAAGTTCCATGCCTGCGGTGG
CGGTGGCGACAATGGTGGTGACAGTAAGACGGAAACGGCTGCTTCTCCGC
GAGGAGAAGAGCGCGGAAGCGGCGGCCGCACGAAAAAGAGATACCGGTGC
AACGGGCTGAACTGCAGCGTCGCTTATTCTCCGTGTTCGTCGCCTTTCTT
CCGCTGTAGCTGTACCGACCTCCGCCCCGTGGAGCACGCCCATGGTGGAG
GCGAGGAGAGGTGTCTGTCTGGCACGAGCGATGGGCGGCCGCGGCCGGAC
AAGATGACCTTCACCGGCGCGAAGATCGTCGCCGCCGTGAAGGAGAGGGG
CGCCGCTGGTGAAAAGTTTGCGGTAGCCGATCGTCCCGACGGGCTGGCGG
GAGAGCTCGTCCTGCGGATCGATCGCGAACAGGAGCAGGCGCTGGGCGCG
TTGAGGATCAAGTCTAGCCGGAGCAACATCTCGGAAGAGGGGCGGACGAT
GTCCATGTCCTGTAGTGACAAGCTGGCCAAGTGGGCGGTGCTTGGCCTGC
AGGTGTGTTGGTCGCGGGCGATATGGCGCCCGAATCGGCGCCCCCTTCTC
CCAGAAAGTTTGCCACACTCTGAAAGTTTCTACCATTTTTACACCGCGTT
TTGTTTTCTTATTTTCTTGTTACTTGTGCTATTACAAGAGCGAATTTTAG
CATCTACGACGCTTGTACGTGGTGCATGGCCTCAATGTGCGAGGACAATC
ATGCTTCTGAGGAAGAGTATGTTTCCCAACCCCCACCCACCCACCCCCAC
CCTACCTATTTTTCAATCTTGGTGCATTACCGCAATGCAGTTAAGTACAC
CCGCTTTTATTCGACAGTTCCGCCTTCAGGACAACTCCTTGTTTGATCAA
AAGCCTTCACCCTAAACCCCTCTCATCCATTATTTCCCTCTCTTGTCATC
ATCTCCCCAAGGGTAGGGCGGCCTCTTGTCTTCCTGGGTAGAACCCGTAT
TCCTCTCGTCTATTGTGGTCAGCGCGTCGAGCCAAAATACCCAGGCTTCT
TCTGCCCCCATCCTGTCGGCGGTGAGGCGAGCGGTTCCCGCGAGAGCGGC
GTTGGCGGCGACGGCGATGGCGGTAGCACGCTCGACTTTGGGGGAAGAGA
CGACGGCTGGCCATCTTTGCCCCCCGCCGGAGGTGAAGATCTTCGTCACC
CGTGTTGCGTTCGACAGGTCAAAGGTGCAGGTTTGCGGCTGGTCTTGTTT
TGAGGCCGAGGAGGAGCTTACGGTTTGCGACTGATTTTGTTTTTGTTTGG
TTCTTGTTGTGTAGTCATACCAATTGGGCCGATCCCCCTATTGGGAGGAT
CAATGCGAGAGTAATCTAGAAGAGCTAGCATGACAGGGCCGGATTGCGCG
GTTATGTGCAATTTAATACATGCACACACACACACACATACACACGCCAG
GACACAGGTAGGACACCCACCCAAAGTGTGTAAAGGCATCCATGCATTGG
TGGAAAAAGCAGGCACTGTACATTACTCAAAATAATGTTTGTAGAGGACG
CGAGGAGGCGAAGAGTGACTTTGTCACTGAGAGTAGAGCGCAGCAAGTCT
TGATAGCTTAAACTCTATCACGCGTGCTGGTTTGCAGAAGTAATAAGTCT
GTTTGCGTGTTTTTTCGGGAAGGGTCGGGGTGAGGGGAGCGGAAGAACGC
TCTCCGGTCCATCGCACGGTGACTCCCTCAATGTGTCCGCCGCTCGGCCT
CCAAGTGCCTTAGACGAATACCATGGAAAAATAATCACGCGCTTCTGGTT
GGTAAATACATGGCGTGTTGTGAGCCTCTCGACCACACCCGCCCGGTTCG
GTTCCTTGTCACACGCGCACCAGGCCGAGCAGCAAGCACTACGAGAACGC
GTAGATTTACCCATTCGGCAAGCCGTCGACTCCACGGAGACCGCTCCGGA
GGGTCGCGGTCGGAACGGGCGGGGCGGCAAGTGCTCCCGAGGGCGGGCTC
CGGTGCCGAGCGGGACGGCGATCAACTGGATCGACGCGCTTGGGACGGGC
AGAGGAGCCGGGCGTGGCGGAGGCGATGATGCCAGCGTTCAGGCCGAGGT
GGCGCTTTCGGCAACGGGCAGGATGCAAGGTGCTGTATCGAAAGGGGTGC
TGACCCCGCGCATGAGGTGGGTAGGTCTGACCTGTTGTGCGCCGTCGGTT
TCTACCCTTCTTCCCCACCCCACCGACGACTTGAGTGCTGCGTAGCGTTG
ATACGATTCCCGTCTATGCAAACAGGGTACGCAGTGTATTTAGTCGTAAG
TTACATTGCTTCGTCTAGAGCCAGGAGCGACTATATTTCGCCTCCAAACG
TTTACGTCGTGGGTTCGATCCCTTGTATCCGTTTTTTAGGGCTGTTGTGG
TCGGGGGGGTTTTTTCCTTCACTTTTTCTAGTTTGATAAAACCCCATCAC
AGCTCACCGTTACTTTCTCCCTCTCCACACATAATACGCGCGCGCGCACA
CACACGTATGTATACACGTGATTTGTTTCTGTTACGTCTGGGCCAGATCT
CGATTGTGCCGCGCGCTGTTATTGGAGGCTGCCGAAAGAGTCGCGCGCTT
AATCCCGGCCGGCGTGGCGCCGCTGGGCGATCGCGACCTCGCTGCGTTCG
ACGTCGGCAGAGGAGGCACTAGTGTAAGTAAAGATGAGGTGGAGGGGGGG
GGGAAAGCGGGCGAAGCCGAAGATATGGAGGAAATGTCACCGCCGCCTGC
ACGGTCGTATTGGAGGCTGAAGCGATCTTGCGAATCGTATCGAATTCGAC
GCTCCGAAATGCTGTTGACGGCGACGTTCGGTTCGTGGCTGGTGGGGAGT
AGGCGCCAGCAGGAGTTCGCGGTGGACGAGCGTGGTTACGTGCCGCTTGC
TAATTGA
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Coding sequence (CDS) from alignment at H-elongata_contig17856:2171..6877-

>mRNA_H-elongata_contig17856.4711.1 ID=mRNA_H-elongata_contig17856.4711.1|Name=mRNA_H-elongata_contig17856.4711.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3222bp|location=Sequence derived from alignment at H-elongata_contig17856:2171..6877- (Himanthalia elongata Himel1 dioecious)
ATGAGCAACAACGGGAGGGGAAGGAGGAGGATGAATATGATTTCCATGAG
CAACAACGGGAGGGGAAGGAGGAGGATGAATATGATTTCCTTCCATGCCT
GCGGTGGCGGTGGCGACAATGGTGGTGACAGTAAGACGGAAACGGCTGCT
TCTCCGCGAGGAGAAGAGCGCGGAAGCGGCGGCCGCACGAAAAAGAGATA
CCGGTGCAACGGGCTGAACTGCAGCGTCGCTTATTCTCCGTGTTCGTCGC
CTTTCTTCCGCTGTAGCTGTACCGACCTCCGCCCCGTGGAGCACGCCCAT
GGTGGAGGCGAGGAGAGGTGTCTGTCTGGCACGAGCGATGGGCGGCCGCG
GCCGGACAAGATGACCTTCACCGGCGCGAAGATCGTCGCCGCCGTGAAGG
AGAGGGGCGCCGCTGGTGAAAAGTTTGCGGTAGCCGATCGTCCCGACGGG
CTGGCGGGAGAGCTCGTCCTGCGGATCGATCGCGAACAGGAGCAGGCGCT
GGGCGCGTTGAGGATCAAGTCTAGCCGGAGCAACATCTCGGAAGAGGGGC
GGACGATGTCCATGTCCTGTAGTGACAAGCTGGCCAAGTGGGCGGTGCTT
GGCCTGCAGTTCCATGCCTGCGGTGGCGGTGGCGACAATGGTGGTGACAG
TAAGACGGAAACGGCTGCTTCTCCGCGAGGAGAAGAGCGCGGAAGCGGCG
GCCGCACGAAAAAGAGATACCGGTGCAACGGGCTGAACTGCAGCGTCGCT
TATTCTCCGTGTTCGTCGCCTTTCTTCCGCTGTAGCTGTACCGACCTCCG
CCCCGTGGAGCACGCCCATGGTGGAGGCGAGGAGAGGTGTCTGTCTGGCA
CGAGCGATGGGCGGCCGCGGCCGGACAAGATGACCTTCACCGGCGCGAAG
ATCGTCGCCGCCGTGAAGGAGAGGGGCGCCGCTGGTGAAAAGTTTGCGGT
AGCCGATCGTCCCGACGGGCTGGCGGGAGAGCTCGTCCTGCGGATCGATC
GCGAACAGGAGCAGGCGCTGGGCGCGTTGAGGATCAAGTCTAGCCGGAGC
AACATCTCGGAAGAGGGGCGGACGATGTCCATGTCCTGTAGTGACAAGCT
GGCCAAGTGGGCGGTGCTTGGCCTGCAGGGCGGCCTCTTGTCTTCCTGGG
TAGAACCCGTATTCCTCTCGTCTATTGTGGTCAGCGCGTCGAGCCAAAAT
ACCCAGGCTTCTTCTGCCCCCATCCTGTCGGCGGTGAGGCGAGCGGTTCC
CGCGAGAGCGGCGTTGGCGGCGACGGCGATGGCGGTAGCACGCTCGACTT
TGGGGGAAGAGACGACGGCTGGCCATCTTTGCCCCCCGCCGGAGGTGAAG
ATCTTCGTCACCCGTGTTGCGTTCGACAGGTCAAAGGTGCAGGTTTGCGG
CTGGGCGGCCTCTTGTCTTCCTGGGTAGAACCCGTATTCCTCTCGTCTAT
TGTGGTCAGCGCGTCGAGCCAAAATACCCAGGCTTCTTCTGCCCCCATCC
TGTCGGCGGTGAGGCGAGCGGTTCCCGCGAGAGCGGCGTTGGCGGCGACG
GCGATGGCGGTAGCACGCTCGACTTTGGGGGAAGAGACGACGGCTGGCCA
TCTTTGCCCCCCGCCGGAGGTGAAGATCTTCGTCACCCGTGTTGCGTTCG
ACAGGTCAAAGGTGCAGGTTTGCGGCTGTGCCTTAGACGAATACCATGGA
AAAATAATCACGCGCTTCTGGTTGGTAAATACATGGCGTGTTGTGAGCCT
CTCGACCACACCCGCCCGGTTCGGTTCCTTGTCACACGCGCACCAGGCCG
AGCAGCAAGCACTACGAGAACGCGTAGATTTACCCATTCGGCAAGCCGTC
GACTCCACGGAGACCGCTCCGGAGGGTCGCGGTCGGAACGGGCGGGGCGG
CAAGTGCTCCCGAGGGCGGGCTCCGGTGCCGAGCGGGACGGCGATCAACT
GGATCGACGCGCTTGGGACGGGCAGAGGAGCCGGGCGTGGCGGAGGCGAT
GATGCCAGCGTTCAGGCCGAGGTGGCGCTTTCGGCAACGGGCAGGATGCA
AGGTGCTGTATCGAAAGGGGTGCTGACCCCGCGCATGAGTGCCTTAGACG
AATACCATGGAAAAATAATCACGCGCTTCTGGTTGGTAAATACATGGCGT
GTTGTGAGCCTCTCGACCACACCCGCCCGGTTCGGTTCCTTGTCACACGC
GCACCAGGCCGAGCAGCAAGCACTACGAGAACGCGTAGATTTACCCATTC
GGCAAGCCGTCGACTCCACGGAGACCGCTCCGGAGGGTCGCGGTCGGAAC
GGGCGGGGCGGCAAGTGCTCCCGAGGGCGGGCTCCGGTGCCGAGCGGGAC
GGCGATCAACTGGATCGACGCGCTTGGGACGGGCAGAGGAGCCGGGCGTG
GCGGAGGCGATGATGCCAGCGTTCAGGCCGAGGTGGCGCTTTCGGCAACG
GGCAGGATGCAAGGTGCTGTATCGAAAGGGGTGCTGACCCCGCGCATGAG
ATCTCGATTGTGCCGCGCGCTGTTATTGGAGGCTGCCGAAAGAGTCGCGC
GCTTAATCCCGGCCGGCGTGGCGCCGCTGGGCGATCGCGACCTCGCTGCG
TTCGACGTCGGCAGAGGAGGCACTAGTGTAAGTAAAGATGAGGTGGAGGG
GGGGGGGAAAGCGGGCGAAGCCGAAGATATGGAGGAAATGTCACCGCCGC
CTGCACGGTCGTATTGGAGGCTGAAGCGATCTTGCGAATCGTATCGAATT
CGACGCTCCGAAATGCTGTTGACGGCGACGTTCGGTTCGTGGCTGGTGGG
GAGTAGGCGCCAGCAGGAGTTCGCGGTGGACGAGCGTGGTTACGTGCCGC
TTGCTAATTGAATCTCGATTGTGCCGCGCGCTGTTATTGGAGGCTGCCGA
AAGAGTCGCGCGCTTAATCCCGGCCGGCGTGGCGCCGCTGGGCGATCGCG
ACCTCGCTGCGTTCGACGTCGGCAGAGGAGGCACTAGTGTAAGTAAAGAT
GAGGTGGAGGGGGGGGGGAAAGCGGGCGAAGCCGAAGATATGGAGGAAAT
GTCACCGCCGCCTGCACGGTCGTATTGGAGGCTGAAGCGATCTTGCGAAT
CGTATCGAATTCGACGCTCCGAAATGCTGTTGACGGCGACGTTCGGTTCG
TGGCTGGTGGGGAGTAGGCGCCAGCAGGAGTTCGCGGTGGACGAGCGTGG
TTACGTGCCGCTTGCTAATTGA
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