mRNA_H-elongata_contig17848.4706.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17848.4706.1
Unique NamemRNA_H-elongata_contig17848.4706.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 4.740e-75
Identity = 126/162 (77.78%), Postives = 138/162 (85.19%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEIRYSS 486
            YERTTELR LCDTLRQHISNLQKHSAA            RLRGWE W +D IELHLQTRFAQLEVAAGL+LWTEGFRTV DIYNIMQIGK TPKARLMASYY++LTRI WVSE+YLFHAYAWYKF++LG+EYNK LT EAK +QA+CVLLAA+SIP+IR  S
Sbjct:  195 YERTTELRRLCDTLRQHISNLQKHSAAQTTN--------RLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQIGKKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSES 348          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.340e-66
Identity = 114/159 (71.70%), Postives = 129/159 (81.13%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEIR 477
            Y RTTE R LCDTLRQHISNLQ+H+ A   T        RLRGWE W ++ IELHLQTRFAQLEVAA L+LWTEGFRTV DIYNIMQIGK  PKARLMASYY++LTRI  VSE++LFHAYAWYK+YTL  EYNKALT E +T QA CVLLAA++IPE++
Sbjct:  193 YARTTEFRRLCDTLRQHISNLQRHTGAAAAT--------RLRGWEGWTSEGIELHLQTRFAQLEVAANLELWTEGFRTVEDIYNIMQIGKKVPKARLMASYYEKLTRIFLVSENHLFHAYAWYKYYTLSREYNKALTAEERTQQACCVLLAALAIPEVK 343          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A6H5KVX7_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX7_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 3.640e-61
Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 1
Query:   94 LLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEIRYSS 486
            LL      RLRGWE W +D IELHLQTRFAQLEVAAGL+LWTEGFRTV DIYNIMQIGK TPKARLMASYY++LTRI WVSE++LFHAYAWYKF++LG+EYNK LT EAK +QA+CVLLAA+SIP+IR  S
Sbjct:    8 LLATQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQIGKKTPKARLMASYYEKLTRIFWVSENFLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSES 138          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A6V1NAU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAU3_HETAK)

HSP 1 Score: 185 bits (470), Expect = 1.170e-54
Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
Query:    7 RTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPE 471
            R  E R LC+T+RQH+ +LQKH A H           RLRGW+ +  +++ELHLQTRFAQL+ A  L++WTE FRT+ DIY+IMQI K  PKARLMA+Y+++LTRI WVS++ LFHAYAW K+Y LG EYNK LT E K +QA  VLLAA+++PE
Sbjct:  196 RMLEFRRLCETMRQHVGHLQKHVAQHTAQ--------RLRGWDGFTPESVELHLQTRFAQLKAATALEVWTEAFRTIEDIYSIMQINKKAPKARLMAAYFEQLTRIFWVSQNRLFHAYAWLKYYQLGREYNKVLTEEEKRAQAGKVLLAALAVPE 342          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A7S2R6Z3_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.350e-52
Identity = 91/156 (58.33%), Postives = 116/156 (74.36%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIP 468
            Y+R  E R LCD LR H+SNLQK+++         +ND RL+ W+ W +++IELHLQTRF QLE  A L+LWTEGF+TV DI+ IMQI K  PKAR+MA YY++L RI WVSE+YLFHAYAW+K++TL   +NK +T E +T  A CVLLAA+SIP
Sbjct:  193 YKRRLEFRRLCDLLRLHLSNLQKYASGPNA-----ANDKRLKVWDGWTDESIELHLQTRFRQLETTAKLELWTEGFKTVEDIHGIMQINKKAPKARVMAMYYEKLQRIFWVSENYLFHAYAWFKYFTLSESHNKGMTNEERTELASCVLLAAMSIP 343          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A7S3PZF8_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZF8_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.280e-49
Identity = 90/169 (53.25%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDP--RLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQI---------GKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEI 474
            Y+R  E + LCD LR H+ NLQK+ +      +     P  R+RGWE W +++IELHLQTRF QLE A+ L L+TEGFRTV DI+NI+QI         G   PKA++MA+YY++LT + WVSE+YLFHA+AWYKFYTL  EYN+ +T E KT QA  VLL+A+ IP +
Sbjct:  196 YKRNVEFKRLCDLLRMHLQNLQKYGSFAAMAKIEEGGKPNNRVRGWEGWTSESIELHLQTRFTQLETASTLHLYTEGFRTVEDIFNILQISNSRRKVAGGSAAPKAKIMAAYYEKLTTLFWVSENYLFHAFAWYKFYTLCREYNRGMTVEQKTQQASAVLLSALCIPSL 364          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A7S2WH75_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WH75_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.630e-49
Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNT-------PKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEIRYSSDSDS 498
            Y+R TE R LCD LR H+ NLQK+             + ++RGWE W  D++ELHLQTRFAQLE A+ L L+TEGFRTV DIYNI++I ++        P+A+LMA+YY++LT + WVSE+YLFHA+AWYK+YTL  EYN+++T E    QA  VLL+A+ IP    +S S S
Sbjct:  219 YKRRTEFRRLCDMLRMHLGNLQKYGGTAFNASADGKLNNKIRGWEGWTMDSLELHLQTRFAQLETASTLSLYTEGFRTVEDIYNILEISQSNAKRLGGMPRAKLMATYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEYNRSMTEEKMQMQASAVLLSALCIPPNHAASASQS 391          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: F0XXZ4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXZ4_AURAN)

HSP 1 Score: 176 bits (445), Expect = 9.510e-49
Identity = 89/158 (56.33%), Postives = 116/158 (73.42%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKA-LTPEAKTSQADCVLLAAVSIPE 471
            +ER TELR LC+TLRQH+SNLQ+ +A         +N  RLRGWE W  + +E+HL TRFAQLEVA+ L+LWTEGFRTV DI+ IM+I K  PKA+LMA YY+RLT+I WVS ++LFHA+AW++   L  E  K   TPE ++ +A  VLLAA++IP+
Sbjct:  188 FERKTELRRLCETLRQHLSNLQRAAAT--------NNTSRLRGWEGWTQEGVEMHLTTRFAQLEVASALELWTEGFRTVEDIHQIMRISKKPPKAKLMAKYYERLTKIFWVSGNHLFHAFAWWRHAQLAKEAEKRPATPEERSHRACAVLLAALAIPD 337          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A448Z9Q6_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9Q6_9STRA)

HSP 1 Score: 178 bits (451), Expect = 9.890e-49
Identity = 94/172 (54.65%), Postives = 116/172 (67.44%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIG----KNTP-----KARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEIRYSSD 489
            Y+R TE R LCD LR H+ NLQK+             + ++RGWE W +D+IELHLQTRFAQLE A+ L L+TEGFRTV DIYNI+QI     KN P     KA+LMA YY++L  + WVSE+YLFHA+AWYK+Y L  EYNK ++ E K  QA  VLLAA+ IP +   SD
Sbjct:  204 YQRRTEFRRLCDLLRMHLGNLQKYGDDSASAKP----NSKVRGWEGWTSDSIELHLQTRFAQLESASYLKLYTEGFRTVEDIYNILQISHHRRKNNPDFAPPKAKLMAKYYEQLIELFWVSENYLFHAFAWYKYYVLCKEYNKGMSEEVKAQQASAVLLAALCIPSLPSKSD 371          
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Match: A0A7S4R7B1_9STRA (Eukaryotic translation initiation factor 3 subunit A n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7B1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.120e-48
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 1
Query:    1 YERTTELRHLCDTLRQHISNLQKHSAAHV-GTLLGHSNDPRLRGWERWNNDNIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNT----------PKARLMASYYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLLAAVSIPEI 474
            Y R TE R LCD LR H+ NLQK+ +  V G   G   + ++RGWE W  ++IELHLQTRFAQLE A+ L L+TEGFRTV DIYNI+QI  +           PKA+LMA+YY++LT + WVSE+YLFHA+AWYK+YTL  E+N+ ++ E +  QA  VLLAA+ IP +
Sbjct:  200 YRRRTEFRRLCDMLRMHLGNLQKYGSGVVPGVEEGGKPNNKVRGWEGWTTESIELHLQTRFAQLETASVLHLYTEGFRTVEDIYNILQISHSRRKIPGVAAPPPKAKLMAAYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSVEMRQMQASAVLLAALCIPTV 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17848.4706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL6_ECTSI4.740e-7577.78Eukaryotic translation initiation factor 3 subunit... [more]
A0A836CG33_9STRA1.340e-6671.70Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KVX7_9PHAE3.640e-6177.10PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6V1NAU3_HETAK1.170e-5458.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2R6Z3_9STRA4.350e-5258.33Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3PZF8_9STRA1.280e-4953.25Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2WH75_9STRA1.630e-4952.02Eukaryotic translation initiation factor 3 subunit... [more]
F0XXZ4_AURAN9.510e-4956.33PCI domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A448Z9Q6_9STRA9.890e-4954.65Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4R7B1_9STRA1.120e-4853.85Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17848contigH-elongata_contig17848:5060..6932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.4
Seed ortholog evalue7.1e-65
Seed eggNOG ortholog2880.D7FZL6
Preferred nameTIF32
KEGG koko:K03254
KEGG Pathwayko03013,map03013
GOsGO:0000131,GO:0001732,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0035690,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070887,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG2072@1,KOG2072@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Hectar predicted targeting categoryother localisation
Exons4
Model size501
Cds size501
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17848.4706.1prot_H-elongata_contig17848.4706.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17848 5060..6932 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.4147055-CDS-H-elongata_contig17848:5059..51951622930030.4147055-CDS-H-elongata_contig17848:5059..5195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 5060..5195 -
1691679253.4302685-CDS-H-elongata_contig17848:5059..51951691679253.4302685-CDS-H-elongata_contig17848:5059..5195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 5060..5195 -
1622930030.4272013-CDS-H-elongata_contig17848:5641..57451622930030.4272013-CDS-H-elongata_contig17848:5641..5745Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 5642..5745 -
1691679253.4416537-CDS-H-elongata_contig17848:5641..57451691679253.4416537-CDS-H-elongata_contig17848:5641..5745Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 5642..5745 -
1622930030.4401393-CDS-H-elongata_contig17848:6078..62231622930030.4401393-CDS-H-elongata_contig17848:6078..6223Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 6079..6223 -
1691679253.4511604-CDS-H-elongata_contig17848:6078..62231691679253.4511604-CDS-H-elongata_contig17848:6078..6223Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 6079..6223 -
1622930030.4593303-CDS-H-elongata_contig17848:6816..69321622930030.4593303-CDS-H-elongata_contig17848:6816..6932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 6817..6932 -
1691679253.4606802-CDS-H-elongata_contig17848:6816..69321691679253.4606802-CDS-H-elongata_contig17848:6816..6932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17848 6817..6932 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17848.4706.1

>prot_H-elongata_contig17848.4706.1 ID=prot_H-elongata_contig17848.4706.1|Name=mRNA_H-elongata_contig17848.4706.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
YERTTELRHLCDTLRQHISNLQKHSAAHVGTLLGHSNDPRLRGWERWNND
NIELHLQTRFAQLEVAAGLDLWTEGFRTVGDIYNIMQIGKNTPKARLMAS
YYDRLTRISWVSESYLFHAYAWYKFYTLGTEYNKALTPEAKTSQADCVLL
AAVSIPEIRYSSDSDS*
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mRNA from alignment at H-elongata_contig17848:5060..6932-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17848.4706.1 ID=mRNA_H-elongata_contig17848.4706.1|Name=mRNA_H-elongata_contig17848.4706.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1873bp|location=Sequence derived from alignment at H-elongata_contig17848:5060..6932- (Himanthalia elongata Himel1 dioecious)
TACGAGAGGACCACCGAGCTTCGACACCTCTGCGACACCTTGAGGCAGCA CATCTCCAACCTGCAAAAGCACTCCGCAGCCCACGTTGGTACCCTCCTGG GACACTCCAACGACCCGTATGAAATCCTCGCGAAGTAGCTTTCGTTGCTT TCTCCTTCTCAAATGTGCCCGTTTCACGGTTACGATTTGTTACCATTTCG CGCTACGGTAGTCTCAAGTGTGTACCGAACAGGGAAGAAAACATTTAAAA TTAAACATGAAATAAAAAATTGTCCCTGCTCAATCGTTAAGCAAAAAGAG GTTTTTGTTTGATCGCCGACGTTGTCATCTTTTCTCATTTTTGCTTGTGT AGTATAAAAAACCCATTCAATGTTGTAGGTAACTAGTCTCACCTACTGCA GTGTTGCCCATCCCGCCCTTGGTCTTAAGAGATCAATCAGACCACCTACC CCCGGTTGGTTCACGCCTCCTTACGATTTCATTATCGTCATGGAAGCTCA GCACTCCCGCAGCTCGATTAAGTGGTGGAGAATATTGGTCTACCGTGGGC GGGCGTGTTGCCTCCAGCACACCACTAGGCATCGAGCACTGGTGCTGACG GGGTATTACGATGAGGGGAGGGGCATTCTGGTTGTTCGCACTCTTTCTGA CGGAGTTGATTTGATTGTGCTGTCTTTGATCGGGGGTTTTCGGCCAATCA GACGACGAGCCGTCTTCGCGGGTGGGAAAGATGGAACAACGACAACATCG AGCTGCATCTACAGACGCGCTTCGCCCAGCTAGAGGTGGCCGCTGGCCTG GACCTCTGGACAGAGGGTTTCCGCACCGTGGGAGATATCTACAACATCAT GCAGGTCTCTATCTTTCTTTCTCTGTTGGAAAACCAAATGTTTGGAAAAT GAGAAAATAAAATCCTACCTTTGGGGAAAATGGTGATTTTCAAAGATTTC CAATACTTTTCTTGAGGCTTTGACGAAAAAATTAAATAAATCAGCGAATT GGCATACCGAGAAATTTTAATAGGCCAAACGCATGGCGTCATGATAACAC AGGAGGGGAGTTGGCGTATATTCTATGTCAGCGAGCCAGATGCCATCCGT ATGAGGTATGCGTAAATCTATTGCTGATGATGCTTCTCAAACCTCGAAAA ATCGAACTCGTCACATCCCTATTTGGGGTTTCCACAGATCGGCAAAAATA CGCCCAAGGCCAGGCTAATGGCAAGCTACTACGATAGGCTTACGCGAATT TCCTGGGTTAGCGAGAGTTACCTCTTCCACGCCTATGCCTGGTGAGACTA CCTATACCATTCTTTTTTTTCTTCTTTGTTTTTAGCCTTTAAACCCTTAA TCATATAAATTATATACCAGCTTGTGTAAGCGACCGAATGCTGTGCAATT AAAAGCGGCGCAGAAGCAATGCAAATCTAGGATGCAACCATCGAACGCCA GTGGACGGGTACAACGTTTCGTTCAGCTTGAAGTGGAGTCGGTTACGACA GTCGTGCTTGAGCAGCTTCGGCAGCCGAAGCAATAGACAGCATCAAACGC CTTGCGGCAACTTTTCCCCCCCACGGATATTCTTGGTGCACGGTGCTTGT AACTTGTGACTCTCTCTCTCTGTCTGTCTCTCTCGATCATGCTGCTGCTG CCGTTGCTGTGTAGGGATGTTGTTTTTCGCGGCGGTCGAATAATCCATTG CCTTATTGCCTTACACGAAATGTGTGTTGATGGTCAGGTATAAGTTCTAC ACTCTCGGCACGGAGTACAACAAGGCCCTCACGCCCGAGGCCAAGACTAG TCAGGCCGATTGCGTGCTCCTCGCCGCGGTATCCATCCCCGAGATTAGGT ACAGTTCTGATAGTGATAGTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig17848:5060..6932-

>mRNA_H-elongata_contig17848.4706.1 ID=mRNA_H-elongata_contig17848.4706.1|Name=mRNA_H-elongata_contig17848.4706.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig17848:5060..6932- (Himanthalia elongata Himel1 dioecious)
TACGAGAGGACCACCGAGCTTCGACACCTCTGCGACACCTTGAGGCAGCA
CATCTCCAACCTGCAAAAGCACTCCGCAGCCCACGTTGGTACCCTCCTGG
GACACTCCAACGACCCTACGAGAGGACCACCGAGCTTCGACACCTCTGCG
ACACCTTGAGGCAGCACATCTCCAACCTGCAAAAGCACTCCGCAGCCCAC
GTTGGTACCCTCCTGGGACACTCCAACGACCCCCGTCTTCGCGGGTGGGA
AAGATGGAACAACGACAACATCGAGCTGCATCTACAGACGCGCTTCGCCC
AGCTAGAGGTGGCCGCTGGCCTGGACCTCTGGACAGAGGGTTTCCGCACC
GTGGGAGATATCTACAACATCATGCAGCCGTCTTCGCGGGTGGGAAAGAT
GGAACAACGACAACATCGAGCTGCATCTACAGACGCGCTTCGCCCAGCTA
GAGGTGGCCGCTGGCCTGGACCTCTGGACAGAGGGTTTCCGCACCGTGGG
AGATATCTACAACATCATGCAGATCGGCAAAAATACGCCCAAGGCCAGGC
TAATGGCAAGCTACTACGATAGGCTTACGCGAATTTCCTGGGTTAGCGAG
AGTTACCTCTTCCACGCCTATGCCTGATCGGCAAAAATACGCCCAAGGCC
AGGCTAATGGCAAGCTACTACGATAGGCTTACGCGAATTTCCTGGGTTAG
CGAGAGTTACCTCTTCCACGCCTATGCCTGGTATAAGTTCTACACTCTCG
GCACGGAGTACAACAAGGCCCTCACGCCCGAGGCCAAGACTAGTCAGGCC
GATTGCGTGCTCCTCGCCGCGGTATCCATCCCCGAGATTAGGTACAGTTC
TGATAGTGATAGTTGAGTATAAGTTCTACACTCTCGGCACGGAGTACAAC
AAGGCCCTCACGCCCGAGGCCAAGACTAGTCAGGCCGATTGCGTGCTCCT
CGCCGCGGTATCCATCCCCGAGATTAGGTACAGTTCTGATAGTGATAGTT
GA
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