mRNA_H-elongata_contig17847.4704.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17847.4704.1
Unique NamemRNA_H-elongata_contig17847.4704.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: D7FM80_ECTSI (GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FM80_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.630e-184
Identity = 262/287 (91.29%), Postives = 277/287 (96.52%), Query Frame = 1
Query:    1 SITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKVELKESPNWVSPSELSV 861
            S+TGFDVVP IIDKMNDAG+KC HPD+CP DLNADIVLLSVPTPL+KETQRLDMKYVWSTIPLVVKLIEQSSGL PILVIRSTVPPGTT KWEA+V+AKT KPF VAFQPEFLRAVSCEEDARAPWQIVFGCAKDAD+TRARMSNCFLDFVGRDENKLTVL IAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+I+AQKVLYLVS+TAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAP+GSVFREFLSGTGKINEWI++TP LKVEL ESPNWVSPSEL+V
Sbjct:   29 SLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMKYVWSTIPLVVKLIEQSSGLTPILVIRSTVPPGTTLKWEAEVRAKTDKPFQVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITNTPSLKVELTESPNWVSPSELNV 315          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: D7G3J5_ECTSI (GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae TaxID=2870 RepID=D7G3J5_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 4.340e-162
Identity = 237/286 (82.87%), Postives = 257/286 (89.86%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTP--QLKVELKESPNWVSPSEL 855
            + GFDVVP II+KMN AGI C HPDNCP DLN +IVLLSVPTPL+KETQRLDMKYVWST+PLVVKLIEQS+G+API VIRSTVPPG T KW A VK KT KPFHVAFQPEFLRAVSCEEDARAPWQ+VFG     ++ RARM+N FL+FVGRDE+KLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+I+AQKVLYLVS+TAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAP+GSVFREFLSGTGKINEWISS     ++VEL ESPNWVSP  L
Sbjct:   43 VRGFDVVPAIIEKMNAAGIPCCHPDNCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVRARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDAL 328          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A6H5KTU6_9PHAE (UDPG_MGDP_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU6_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 1.720e-143
Identity = 218/287 (75.96%), Postives = 231/287 (80.49%), Query Frame = 1
Query:    1 SITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKVELKESPNWVSPSELSV 861
            S+TGFDVVP IIDKMNDAG+KC HPD+CP DLNADIVLLSVPTPL+KETQRLDMK                                                  VAFQPEFLRAVSCEEDARAPWQIVFGCAKDAD+TRARMSNCFLDFVGRDENKLTVL IAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+I+AQKVLYLVS+TAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAP+GSVFREFLSGTGKINEWI++TP LKVEL ESPNWVSPSEL+V
Sbjct:    5 SLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMK--------------------------------------------------VAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITNTPSLKVELDESPNWVSPSELNV 241          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A3G5A9S5_9VIRU (GDP-mannose 6-dehydrogenase n=1 Tax=Hyperionvirus sp. TaxID=2487770 RepID=A0A3G5A9S5_9VIRU)

HSP 1 Score: 142 bits (358), Expect = 1.100e-33
Identity = 90/274 (32.85%), Postives = 146/274 (53.28%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDP----TINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKV 813
            + G +    +I+K+       H  DN       D V++S+ TPL  + ++LD+ Y++S++P V ++++ +  +  +++IRSTV PGTT +++AD++A   K   V FQPEFLRA S  EDAR PW IV G     D T+  + N +  F   D   ++ + I EAE +K  HN  N  KIS+ N  + L   ++     T++  K+   ++ T E  L+ KYG   G  + G CLPKD  EL +L  +  +     +   K+N+ I  T   ++
Sbjct:   42 VIGIEANKELINKLKLKFEMYHIKDNLSLITGIDFVMISINTPL--KGKKLDLTYLFSSLPNVAEIVKNNPDV--MVIIRSTVEPGTTKRYKADLEALVGKRVDVLFQPEFLRAKSALEDARNPWHIVLGVDASTDITK--LMNLYTQFT--DAKHISTMTIEEAEILKSFHNCYNAAKISWFNQAHLLVKRINESKGLTMDIHKITTTLTKTCEGLLNPKYGTTAGHAFYGSCLPKDSTELATLEQEYGLEAPLFTSVVKVNDIIKRTDTAEI 307          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A3G4ZX75_9VIRU (GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZX75_9VIRU)

HSP 1 Score: 137 bits (345), Expect = 5.810e-32
Identity = 84/274 (30.66%), Postives = 145/274 (52.92%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFAN----CIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKV 813
            + G +    +++K        H  D+     + D + LS+ TPL + TQ+L++KY++S+IP V  +++ S     ++V+RSTVPP TT  ++ +++A      +V FQPE+LRA S ++D+ AP  I+ G  +D     + +   +  F+ R+  K+  + I EAE  KL HN  N  KIS+ N     +  +  E    INA +V+  ++ T E   +R+YGL+ G  +GG CLPKD+ +   L     +  +       +NE   +T + ++
Sbjct:   46 VVGIEASKELVEKFKKEFETYHISDDLSHVKDVDFIFLSINTPLDEATQKLNLKYLFSSIPNVCTIVKNSPKA--LVVVRSTVPPTTTNTYKKELEALCGFKVNVLFQPEYLRAYSAKKDSEAPLYIIIG--RDEGTDVSSLIELYSKFIARE--KIEEMTIEEAELQKLFHNCFNATKISYFNQCKLLMDAVNKEHKSNINADRVIMSLANTCEGLWNRRYGLKSGHAFGGFCLPKDMKQAAYLEKIYGLKAQIFKSVNDVNEIYKATDREEI 313          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A814QHR5_9BILA (UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A814QHR5_9BILA)

HSP 1 Score: 134 bits (337), Expect = 4.590e-31
Identity = 91/279 (32.62%), Postives = 148/279 (53.05%), Query Frame = 1
Query:    1 SITGFDVVPGIIDKMNDAGIKCHHPDNCP-----PDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVI-RSTVPPGTTPKWEADVKAKTTKP---FHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFV----GRDENKLTVLNIAE-AEFMKLVHNYANGLKISFANCIYGLAN----ELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINE 783
            S+ G D      ++M +    C  PD         D+  D++L+++PTP    T  L  + +  +I L+  LI++     P+++I +STV  GT+ K    +K   T     +H+ + PEFLRA   + DA  P + +FG      +         L+ +    G   + +T+++ +E AEF+KLVHN++N ++ISF+NC   LA+    +LD  I+A +VL +VS TAE F + KYG++ G PY G CLPKD+    ++  +   +R+FL     INE
Sbjct:   26 SMVGIDTCMIARNRMINMNFSCFSPDEVMFEEKMNDILVDVILIALPTPFCSLTNTLSDESIMLSIGLISYLIKKKKDDNPVMIILQSTVSVGTSRKLFNGLKLFNTDDNCNYHLFYHPEFLRAEKSQYDALHPIKQIFGLTDGKPKMDLSYYENILEEIFSPIGSFRSSITMMSSSEEAEFLKLVHNFSNAMRISFSNCCAHLASLLSSKLDKEIDASRVLSVVSETAESFYNNKYGIKPGYPYSGACLPKDIQCFMNIT-EQYPYRQFLESVHLINE 303          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A3G5A2J2_9VIRU (GDP-mannose 6-dehydrogenase 2 n=1 Tax=Harvfovirus sp. TaxID=2487768 RepID=A0A3G5A2J2_9VIRU)

HSP 1 Score: 127 bits (320), Expect = 1.130e-28
Identity = 78/241 (32.37%), Postives = 132/241 (54.77%), Query Frame = 1
Query:  103 DIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPT----INAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKV 813
            D V++S+ TPL     +LD+  ++ ++P V  ++  +  +  +++IRSTV PGTT +++A ++A   K   V FQPEFLRA +  EDAR PW IV G   D+     ++   + ++   +   +T+L+I EAE MKL HN  N  KIS+ N    L + ++      ++ +K+   ++ T E  L+  YG   G  Y G CLPKD  EL+ L  +  +     +   ++N+ + +T + +V
Sbjct:   70 DFVMISIDTPL--RDDKLDLTNLFRSLPNVATIVNNNPDV--MIIIRSTVEPGTTVRYKAQLEALVNKEVKVLFQPEFLRAKTALEDARNPWHIVLGA--DSKTIVTKLLGLYTNYTALEN--ITILSIEEAESMKLFHNCYNAAKISWHNQAQRLVDRINARKGLKMDIKKITEAMTRTCEGLLNPAYGTTPGHAYYGTCLPKDSKELSRLEKEYGLEAPLFTAVVQVNDLVKATDKAEV 302          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A1M5XVU1_9ACTN (UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A1M5XVU1_9ACTN)

HSP 1 Score: 117 bits (294), Expect = 1.730e-25
Identity = 90/279 (32.26%), Postives = 130/279 (46.59%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNAD---IVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTT-----PKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFREFLSGTGKINEWISSTPQLKVE 816
            +T  DV    +D +   G+          DL+A+    + L++PTP V    + D+    +    V K +  ++G  P++V+RSTVPPGT      P  E        + F +A  PEFLRA +  ED R PW  V   A  +  TR R+      F G         N AEAEF+K  HN  N  KISF N ++ +   L   ++   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA    V    L     +N+ ++   +L+ E
Sbjct:   27 VTFIDVAQQRLDHLRSEGLDAR----ADLDLSAEPDAFIFLTLPTPNVGH--QYDLSAFEAGTASVGKALADATG-TPVVVVRSTVPPGTAEGLVQPLLEKHSGKNVGEGFSLASNPEFLRAATAVEDFRHPWMTVI--ASRSVRTRERLGELLAPFGGETR---VFSNPAEAEFVKCAHNIYNATKISFWNEMWLVGQHLG--LDLDPIAQTVARSAEASYNPHYGIRGGAPYGGVCLPKDTQGFLGLAASIGVDMPLLQAVVAVNDKLAEVAELEAE 291          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A0G0BGR3_9BACT (Nucleotide sugar dehydrogenase n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0BGR3_9BACT)

HSP 1 Score: 115 bits (289), Expect = 1.010e-24
Identity = 86/275 (31.27%), Postives = 138/275 (50.18%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIK-CHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADV-----KAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFR-EFLSGTGKINEWISSTPQL 807
            +T  D+   +I+ +N  G++ C+   +C  D   DI ++SV TP + +   LD +++ S +  + ++++ ++   P+++IRSTVPPGT  K  A +       K  K F +A  PEFLR VS EED   PW ++ G  +       R++    +        +  + I EAE MK VHN  N  KISF N +  +A      ++A K+   V  +AE   ++KYG+R   P+ G CLPKD     + A + +  +   L    KINE +     L
Sbjct:   44 VTFVDINTILIESLNKEGLEACNIGASCSND--RDIYVVSVLTPTIND--HLDFRFIDSALASLGRVLKSNANW-PLIIIRSTVPPGTVEKRFAPILEKYSDKKADKDFGIAMNPEFLREVSAEEDFMHPWIVILGSREP------RVAQILQELYQPFNAPIIHMTIKEAEMMKYVHNIYNANKISFFNEMRLVAESAG--VDADKIFEAVVESAEASWNKKYGIRNFGPFDGSCLPKDTLAFLNWANEKTKKKMPLLHAVIKINEHLKEKEYL 305          
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Match: A0A0G0APE8_9BACT (UDP-glucose 6-dehydrogenase n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APE8_9BACT)

HSP 1 Score: 114 bits (286), Expect = 2.470e-24
Identity = 80/240 (33.33%), Postives = 126/240 (52.50%), Query Frame = 1
Query:    4 ITGFDVVPGIIDKMNDAGIK-CHHPDNCPPDLNADIVLLSVPTPLVKETQRLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTT-----PKWEADVKAKTTKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDFVGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINAQKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKD 705
            +T  D+   +I+ ++  G++ C+  D C    N DI ++SV TP + +  +LD +++ S I  + ++++ +S   P++VIRSTVPPGT      P  E   + K  K F +A  PEFLR  S EED   PW I+ G          +++    +     +  +  + I EAE  K VHN  N  KISF N +  +A  +   ++A KV   V  +AE   +++YG+R   P+ G CLPKD
Sbjct:   43 VTFVDINTILIESLSKEGLETCNINDFC--SNNRDIYIISVLTPTIND--KLDFRFIDSAIANLGRVLKDNSNW-PLIVIRSTVPPGTVQERFVPILEKYSEKKIEKDFGIAMNPEFLRETSAEEDFMHPWIIIIG------SNEPKVAQILEELYAPFKAPIVHMTIKEAEMTKYVHNIYNANKISFFNEMRLVAESIG--VDADKVFNTVVESAEASWNKQYGIRNFGPFDGSCLPKD 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17847.4704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM80_ECTSI1.630e-18491.29GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae T... [more]
D7G3J5_ECTSI4.340e-16282.87GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae T... [more]
A0A6H5KTU6_9PHAE1.720e-14375.96UDPG_MGDP_dh domain-containing protein n=1 Tax=Ect... [more]
A0A3G5A9S5_9VIRU1.100e-3332.85GDP-mannose 6-dehydrogenase n=1 Tax=Hyperionvirus ... [more]
A0A3G4ZX75_9VIRU5.810e-3230.66GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp... [more]
A0A814QHR5_9BILA4.590e-3132.62UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steine... [more]
A0A3G5A2J2_9VIRU1.130e-2832.37GDP-mannose 6-dehydrogenase 2 n=1 Tax=Harvfovirus ... [more]
A0A1M5XVU1_9ACTN1.730e-2532.26UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces Ta... [more]
A0A0G0BGR3_9BACT1.010e-2431.27Nucleotide sugar dehydrogenase n=3 Tax=Candidatus ... [more]
A0A0G0APE8_9BACT2.470e-2433.33UDP-glucose 6-dehydrogenase n=2 Tax=Candidatus Mor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17847contigH-elongata_contig17847:316..4642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score102.1
Seed ortholog evalue4.6e-19
Seed eggNOG ortholog365528.KB891103_gene4173
KEGG rclassRC00291
KEGG koko:K00012
KEGG ReactionR00286
KEGG Pathwayko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100
KEGG ModuleM00014,M00129,M00361,M00362
EggNOG free text desc.UDP-glucose/GDP-mannose dehydrogenase family, central domain
EggNOG OGs2IF5H@201174,COG1004@1,COG1004@2
EC1.1.1.22
COG Functional cat.M
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGDP-mannose 6-dehydrogenase
Ec32 orthologEc-16_004740.1
Exons6
Model size2355
Cds size864
Stop1
Start0
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.2663295-UTR-H-elongata_contig17847:315..18061622930030.2663295-UTR-H-elongata_contig17847:315..1806Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17847 316..1806 -
1691679253.3353384-UTR-H-elongata_contig17847:315..18061691679253.3353384-UTR-H-elongata_contig17847:315..1806Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17847 316..1806 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.2815013-CDS-H-elongata_contig17847:1806..18601622930030.2815013-CDS-H-elongata_contig17847:1806..1860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 1807..1860 -
1691679253.3511596-CDS-H-elongata_contig17847:1806..18601691679253.3511596-CDS-H-elongata_contig17847:1806..1860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 1807..1860 -
1622930030.2921295-CDS-H-elongata_contig17847:2348..26371622930030.2921295-CDS-H-elongata_contig17847:2348..2637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 2349..2637 -
1691679253.360519-CDS-H-elongata_contig17847:2348..26371691679253.360519-CDS-H-elongata_contig17847:2348..2637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 2349..2637 -
1622930030.3048053-CDS-H-elongata_contig17847:3152..32241622930030.3048053-CDS-H-elongata_contig17847:3152..3224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3153..3224 -
1691679253.370914-CDS-H-elongata_contig17847:3152..32241691679253.370914-CDS-H-elongata_contig17847:3152..3224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3153..3224 -
1622930030.3163605-CDS-H-elongata_contig17847:3566..37001622930030.3163605-CDS-H-elongata_contig17847:3566..3700Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3567..3700 -
1691679253.381015-CDS-H-elongata_contig17847:3566..37001691679253.381015-CDS-H-elongata_contig17847:3566..3700Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3567..3700 -
1622930030.3316987-CDS-H-elongata_contig17847:3972..41221622930030.3316987-CDS-H-elongata_contig17847:3972..4122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3973..4122 -
1691679253.3975923-CDS-H-elongata_contig17847:3972..41221691679253.3975923-CDS-H-elongata_contig17847:3972..4122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 3973..4122 -
1622930030.3419838-CDS-H-elongata_contig17847:4477..46421622930030.3419838-CDS-H-elongata_contig17847:4477..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 4478..4642 -
1691679253.4093037-CDS-H-elongata_contig17847:4477..46421691679253.4093037-CDS-H-elongata_contig17847:4477..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17847 4478..4642 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17847.4704.1prot_H-elongata_contig17847.4704.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17847 1807..4642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17847.4704.1

>prot_H-elongata_contig17847.4704.1 ID=prot_H-elongata_contig17847.4704.1|Name=mRNA_H-elongata_contig17847.4704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
SITGFDVVPGIIDKMNDAGIKCHHPDNCPPDLNADIVLLSVPTPLVKETQ
RLDMKYVWSTIPLVVKLIEQSSGLAPILVIRSTVPPGTTPKWEADVKAKT
TKPFHVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADETRARMSNCFLDF
VGRDENKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTINA
QKVLYLVSTTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPDGSVFR
EFLSGTGKINEWISSTPQLKVELKESPNWVSPSELSV*
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mRNA from alignment at H-elongata_contig17847:316..4642-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17847.4704.1 ID=mRNA_H-elongata_contig17847.4704.1|Name=mRNA_H-elongata_contig17847.4704.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4327bp|location=Sequence derived from alignment at H-elongata_contig17847:316..4642- (Himanthalia elongata Himel1 dioecious)
AGCATCACTGGTTTCGATGTGGTGCCCGGCATCATCGACAAGATGAACGA CGCGGGGATCAAGTGCCACCATCCGGACAACTGCCCCCCCGACCTCAACG CGGACATCGTCCTCCTGTCGGTGCCGACTCCTCTCGTGAAGGAAACTCAG CGCCTAGACATGAAGGTGGCCTACGTGTGAATAATCTTCTCTCGATCTCG TCGAACGAAGTAGTATATTAGTACATGGAATATAGTGAAATGAGAGGTGA GATATGATTTTTCGCGCGGTACGAGACCCGCCGCGGTGAAGCGCCGATGT GTGTATTTGTGCAGTTTTTTCCTTGGATTGTTTTTTTTTTGTTTTTGCGT GATAAGCTCGAATGACTTAAACTCTAATTTTGTTGTAAACGCAACCGGGA TCGGGAAGCGTGTATGCGCTCATTGGGACCAAGGCTGGCCCCTCCTGTCT CTGGCCGTCTCTCGCATCTCGTCCCCTCTTAACCCTCTGCTCTCCTCCAT CGTATTTTTCTTTCCCGCAGTACGTGTGGTCCACAATTCCCCTTGTGGTC AAGCTGATCGAGCAATCGTCCGGCCTGGCGCCAATCCTCGTGATTCGATC CACCGTGCCCCCGGGCACGACGCCAAAATGGGAGGCGGACGTCAAGGCCA AGACCACCAAGCCCTTTCACGTAAGCCGCGCGCCTGTCTCGGCGCGGTAA TGAAACACGCAGGTTGCACGAGTAGAAAAACGACGGTCTCGGGAGTCTTC CGGCTTAATATTCTCCCTCTTTTTTTCTCTCCTTTAGTGTCTCATCGGTC GTTACACAATAAAAACAATGCCTGGAATTCTGTGTAAAACACCCTTGATG ATGCTGGCGTCACAGAAAGACGATGATAGCCCTGTGTGCGAATGCAATCC CGTCATATCTTTTGCGATGCTCCCATCTATTTCGCTCTACAGGTGGCCTT CCAGCCCGAGTTCCTCCGCGCGGTATCTTGCGAGGAGGACGCCCGGGCGC CGTGGCAGATCGTATTCGGCTGTGCAAAGGACGCCGATGAAACCCGCGCC CGCATGTCCAACTGCTTCCTCGACTTGTGAGCACCTTGCAGGCCCGTGGA CATTGCGTGAAACGTATGGTTGTGTGTACCTTAGGTGGTCAAAACGACCG ATTAGTAATTTGCCTGGCACGATTACGGGACAAGCTGGAGAGATTGGTGG AGAAAAACATCGGCGGGCTTGTTGGGTTCGCACGCGTGCTCTCGGCACTT CTTTTTTTATGCGGGGTCAGTTGTTAACCGTGCCTATTTTGGTTTTGTTT GTTTTTTCCTTTCTCCTGGGCGATTAATTTGTCTTATTCGCGCCCTTCCG CCCTGTATTTTCCTGCCCGCTCGCTCGTGCCCGACGTTGTTGAACATGGG CACGAACCGCCTCACCAGCGTGGGGCGAGACGAAAACAAGCTGACTGTCC TAAACATCGCCGAGGCCGAATTTATGAAGCTTGTGCACAAGTGAGGGAGG CTCTCGATGCATTGTTCGATATCTTTTTGGGTTTATCGATAGATCGACGC TGGAAAAATAAATATAAGCACCGGATCTCCTTACCACTCGACGAGACGCG ACGGGTCCAGCAGCAGTGCGCTCACCCTTACATTACAGTGCTTCTAGAGT ATCGGTGAAGAATTCCAAAACCATGAGTGGTGCGTTCACAATCGTCGGTG TACGGCAAACTCCGTCACCCGTTGCTGCGGTGGCTGCAAATTTTGTACCG CTGTGTTAAACCTGACTCCGACACGAGCCTTGAAAATCCAACAACCCCCG ACGTGCTTTCTAGTGAATGTAAAAGCTTCGCGTGCAGGATATGCTGTGTG TGAGGAGAGCGATCGCGAAAATCCGCCGCCTCTCGAACCACGAACGGTGA AGTCATCCGATCTCTCCTGCGCCTGCCGAAAATGTCCCGCACCTCTCGCT GGTGTCGCGTCCCGCCGTTCTTATTTTCTTCGCTGCGATTTATTCGTCTG AACAGCTACGCTAACGGGCTCAAGATATCATTCGCCAACTGCATCTACGG CCTGGCCAACGAGCTTGACCCTACCATCAATGCGCAAAAGGTCTTGTACC TCGTCTCCACCACAGCCGAATGCTTCCTCAGCCGCAAGTACGGCCTCCGC GTGGGCGCTCCGTACGGCGGCGTGTGCCTCCCAAAGGACGTGCCGGAGCT CACAAGCTTGGCGCCCGACGGTTCCGTGTTCAGGGAGTTTCTTTCGGGAA CTGGCAAGATCAACGAGTGGATTTCGAGCACGCCACAGCTCAAGGTGATA ATGCTTGCGAGGCAGCGGTGCTGAATATTTTCCCCTTGGTTCTTTTTCTT GTTAGGTATACTCCACAAAACCGGCAACGCTGCCAGCGCGGTTATATATA CATATATATATATATATATATATATATATATATATATTAAAATGAACTCA TTCCAACCCTCCGAACATCCACACCTTCTTAGCGCCGTGAGAGGTGCAAT CGAAGGGACCAACTATCGTCAGGTTCGAATATGTACATTATTACCTTTTG AGTACAAAATCGTCCCACGTGAGTATGTAAGGTCAGTAAAGCACATGGTT GCATTGTACATATATCTCGATTAATTTCGGACTCCCCCTGCCGTAAAAGC GCACCCTCCCCCTTAGGGAAGAGTAGGAAGCCCCTCTTAAATGGTGGAGA GTGTTGGGTGCTGGTTCCACGTCTGGTCGAACATCGCCTCAAGATTTGTT CCACCTCCCGTGGTTTACTCTCTTCCCTTTAGGTCGAGCTGAAGGAGAGC CCAAACTGGGTATCGCCCAGCGAGCTTTCCGTCTAAGGTATACTGGACGT GGAGCGGCGAAGAATGTCTAAGAAAGGGGAGCTGACTCTAGTGGAAGTTT TGCGCGAAGTGTGTGAAACATTGGTACGTTTTTGTGCACACTTGTAAATT GTTAGGAGGGGCGGAGTAAGTACTCACAAAGAGCGAAAACATCATAGCAG TGCGAACGCTCGTCACCGACTTAAAAGTTCGCATCGCTTCTTAAATAATA CTAGGAAGAATTGTTGGTTGGCCGTATTTGGCTCACTCCTTTCGGAGTGG GAGGGTGGGAGCGGTCGGAGGAGCTGCGTCCTGTCGGCCGCACAGCTTTT GCTGCTAGATGCGTGACATCACGTGATTTATCATTCTCGCGCGACCCTTG GTACGCGTGTAGATGTTCCGGCACACAGGAGACTCATAAAATGTTTCTGA TCCGCAAGAAAAGGCAAAGACATGACAGAGAAAACAAAAATAGGGTAACC GTGCTCTAGTGTAGTATGTGGACAGTACCACCAGTGTCGCTACGTTGAAG AGGGAGGAGGGTCGTGATCTCGGTTTCGTTAGTTGACGTGAAGGCTCTGC GAACCTAATAGCCTACCTTTGGCGTGCAGGCTTGCTATCTCTTCCACGCT AACGCGTTGGCCTTACATGCGGCTCCCTTTTTATCATGATGTTGCACAAT ATCCAGCACCGTTGCGGCTGTCGATCTATTTATTACGCCGAGGAAAACGA GGGCAGAGGGTGGAAAACGCATTTGCACGGATTGCGTATTGTTTGGCCTG AACCCCCCACCCCCCCATCTTGGCCCGGTAGCCGATTAGCCGTCGATAGA GACTTCAGAGAGAAAGATATCGCCAAGAAAGTATGCGTCATCCATCTCTC TTTTCTTCGTAAGGCTACACTTACGTTGGCGGGAACTATTTTTCGGCACA TGTCTGTCTGAAGCGTGTCATTTGTTGAGATATTTTTGTTTGGTTTGTTT TTTCCCGGTCGTGTGTTTCGCGAAAACAAGGAATTTCAGCGTTCAGTTGT ACCGGTAGATTTTAGCGGGCGTCATTTGTTGCGCCCGGGAAATGATTTGG GACAATATTAGTCCGTGTCGTTCATTTTGATGTGGACAAACATTGGAAAT CAGTTTGGACGCAGTTAAAAAATAAACATGCGTACACTCGGATGACCCGA AGTAAAACACTCGAGAGTCTGGAGGTGAAATATCGCTGCACATTCAAGCT GGTAGTGTTGCGATAGCCGAAGGCCGAGCGCCGTACACATGCATATATAG TGTGCCCAGGTTTATGTCTCGCCACCCGAACTGATGTAAATTCTATTCCG TACTTTTCGGCGTGATATTTTCGTTAAGCCGTTTTCATCGAGTAGCCACG GAGCGGTTCGACCACAAAACATGTACTTGTGTTCTTATGTAGTATGTATA GTATACAATGTATTTTGTACACACTTGAACGTGATGAATACCATATATTA TATCGCTATATATATAATTAATTTCCA
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Coding sequence (CDS) from alignment at H-elongata_contig17847:316..4642-

>mRNA_H-elongata_contig17847.4704.1 ID=mRNA_H-elongata_contig17847.4704.1|Name=mRNA_H-elongata_contig17847.4704.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1728bp|location=Sequence derived from alignment at H-elongata_contig17847:316..4642- (Himanthalia elongata Himel1 dioecious)
AGCATCACTGGTTTCGATGTGGTGCCCGGCATCATCGACAAGATGAACGA
CGCGGGGATCAAGTGCCACCATCCGGACAACTGCCCCCCCGACCTCAACG
CGGACATCGTCCTCCTGTCGGTGCCGACTCCTCTCGTGAAGGAAACTCAG
CGCCTAGACATGAAGAGCATCACTGGTTTCGATGTGGTGCCCGGCATCAT
CGACAAGATGAACGACGCGGGGATCAAGTGCCACCATCCGGACAACTGCC
CCCCCGACCTCAACGCGGACATCGTCCTCCTGTCGGTGCCGACTCCTCTC
GTGAAGGAAACTCAGCGCCTAGACATGAAGTACGTGTGGTCCACAATTCC
CCTTGTGGTCAAGCTGATCGAGCAATCGTCCGGCCTGGCGCCAATCCTCG
TGATTCGATCCACCGTGCCCCCGGGCACGACGCCAAAATGGGAGGCGGAC
GTCAAGGCCAAGACCACCAAGCCCTTTCACTACGTGTGGTCCACAATTCC
CCTTGTGGTCAAGCTGATCGAGCAATCGTCCGGCCTGGCGCCAATCCTCG
TGATTCGATCCACCGTGCCCCCGGGCACGACGCCAAAATGGGAGGCGGAC
GTCAAGGCCAAGACCACCAAGCCCTTTCACGTGGCCTTCCAGCCCGAGTT
CCTCCGCGCGGTATCTTGCGAGGAGGACGCCCGGGCGCCGTGGCAGATCG
TATTCGGCTGTGCAAAGGACGCCGATGAAACCCGCGCCCGCATGTCCAAC
TGCTTCCTCGACTTGTGGCCTTCCAGCCCGAGTTCCTCCGCGCGGTATCT
TGCGAGGAGGACGCCCGGGCGCCGTGGCAGATCGTATTCGGCTGTGCAAA
GGACGCCGATGAAACCCGCGCCCGCATGTCCAACTGCTTCCTCGACTTCG
TGGGGCGAGACGAAAACAAGCTGACTGTCCTAAACATCGCCGAGGCCGAA
TTTATGAAGCTTGTGCACAACGTGGGGCGAGACGAAAACAAGCTGACTGT
CCTAAACATCGCCGAGGCCGAATTTATGAAGCTTGTGCACAACTACGCTA
ACGGGCTCAAGATATCATTCGCCAACTGCATCTACGGCCTGGCCAACGAG
CTTGACCCTACCATCAATGCGCAAAAGGTCTTGTACCTCGTCTCCACCAC
AGCCGAATGCTTCCTCAGCCGCAAGTACGGCCTCCGCGTGGGCGCTCCGT
ACGGCGGCGTGTGCCTCCCAAAGGACGTGCCGGAGCTCACAAGCTTGGCG
CCCGACGGTTCCGTGTTCAGGGAGTTTCTTTCGGGAACTGGCAAGATCAA
CGAGTGGATTTCGAGCACGCCACAGCTCAAGCTACGCTAACGGGCTCAAG
ATATCATTCGCCAACTGCATCTACGGCCTGGCCAACGAGCTTGACCCTAC
CATCAATGCGCAAAAGGTCTTGTACCTCGTCTCCACCACAGCCGAATGCT
TCCTCAGCCGCAAGTACGGCCTCCGCGTGGGCGCTCCGTACGGCGGCGTG
TGCCTCCCAAAGGACGTGCCGGAGCTCACAAGCTTGGCGCCCGACGGTTC
CGTGTTCAGGGAGTTTCTTTCGGGAACTGGCAAGATCAACGAGTGGATTT
CGAGCACGCCACAGCTCAAGGTCGAGCTGAAGGAGAGCCCAAACTGGGTA
TCGCCCAGCGAGCTTTCCGTCTAAGTCGAGCTGAAGGAGAGCCCAAACTG
GGTATCGCCCAGCGAGCTTTCCGTCTAA
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