mRNA_H-elongata_contig17763.4673.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A6H5K090_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K090_9PHAE) HSP 1 Score: 453 bits (1166), Expect = 1.560e-155 Identity = 226/351 (64.39%), Postives = 272/351 (77.49%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDN--SLELPEDYCGSCYGARKDCCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPH--------PAGDAS-VKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNA----VILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRR 1008
TFHSI CL+VHVDAMDVAG+NQIDIDH M KQRL PDG AIGE F EVPG+ D+ + LPEDYCGSC+GA++ CCN CRDV +AY A GW++ DIRRTAEQCIRDNH+E P+V GEGC LSGFMSVNKVSGNFHVA GEGVMR+G+H+HLY + AV FN+SH+I+ LSFGEP+PGM+PNPLD SRIIDED+ TG FQY++KLVPTV + P P G + + ++LTSQF+YTYKFRSLKG TEY + +G++ +A G KD +N+ V+LP GVFF+YDVSPFMVE++P + P HLLIRLCAVAGGAFA+S IVDS VF++SNRLRR
Sbjct: 113 TFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGKVDDDPAQSLPEDYCGSCFGAKEGCCNMCRDVVEAYTAKGWSVQDIRRTAEQCIRDNHIETPIVIGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPYPGMKPNPLDSTSRIIDEDVGTGAFQYYIKLVPTVHSLNPQSETSRSPLPKGKREEAEQQQHSSLTSQFTYTYKFRSLKGLTEYHADHEEGEEQAK-EAEKGSTKDGGVNSFANSVLLP-GVFFVYDVSPFMVEVVPAEQPPFSHLLIRLCAVAGGAFAISGIVDSAVFYLSNRLRR 461
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A836CGD9_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD9_9STRA) HSP 1 Score: 316 bits (809), Expect = 1.800e-101 Identity = 169/372 (45.43%), Postives = 228/372 (61.29%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----LPEDYCGSCYGARKD-----------------CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATL-TSQFSYTYKFRSLKGETEYKKERADGDDLPHH-------------DAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRR 1011
TFH+I+CL++HVDAMDVAG+NQ+D++H MLKQRL A GEP A E + LE LP DYCG+CYG+ CCNTC V +++ GW+ ++R+TAEQCIR+ H+E P+ E EGC LSG M VNKV+GNFH+A GE +++DG+H+H++N DD+ FN SHTIH LSFG+ +P M NPLDG R++ ED TGL QY++ LVP V A GE L T+QF+YT KFRS+ G +++ HH D A G+ K + +LP GVFF+YD++PFM+E+ V PL H LIRLCAV GG +AVS ++D ++HV + ++ R
Sbjct: 111 TFHAINCLDLHVDAMDVAGDNQLDVEHAMLKQRLS----AAGEPLAPAISEEVSQLEHRATLPRDYCGNCYGSDSRGRAAAAAERAASGGSIRCCNTCHAVVESFALRGWSTAEVRKTAEQCIREAHLEVPMQEMEGCNLSGKMRVNKVAGNFHMAMGESMVKDGRHVHIFNIDDSDTFNISHTIHSLSFGDTYPDMPANPLDGVVRMVGEDTGTGLMQYYINLVPAVY--------KAEGSSGEKTELVTTQFTYTMKFRSVYGYDDFQAHEHHDQPGHHHAIGEHRDVPGDEGDGAGGKRKRREITNYLLP-GVFFVYDMAPFMLEV-EVWQQPLSHFLIRLCAVVGGVYAVSGMLDQALYHVISHMKGR 468
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S3M7C1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7C1_9STRA) HSP 1 Score: 276 bits (705), Expect = 9.050e-87 Identity = 149/336 (44.35%), Postives = 208/336 (61.90%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE-LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDN--HMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHV 990
TFHS++C EVH+DAMDVAG+NQ++++H+M+KQR+ GI IG E+ GEG +E P +YCG C+GA CCNTC + AY W++ +I R + QCI D H N + EGC +SG MSVNKV+GNFH+A GE ++RDG+HIH +N A FN SHTIH LSFG+P+P M NPLD RII ED STGLFQYF++++PT+ + + G T+Q++ T +FR L +A+GD+ P ILP G+FF+Y++SPFM+E ++ MP H + +LCA+ GG F V ++DS++F +
Sbjct: 90 TFHSLTCNEVHLDAMDVAGDNQLNVEHEMVKQRMSRHGIPIGAAGVEIIGEGPIEVEDHPPNYCGDCFGADTPEIRCCNTCDQLIQAYQLKQWSVSEILRNSTQCIHDRAKHFAN-IGADEGCTVSGKMSVNKVAGNFHIAHGESIVRDGRHIHQFNPALAPKFNVSHTIHSLSFGDPYPSMPANPLDSVKRIIAEDESTGLFQYFIRVIPTIY----------TNEYGR-QVFTNQYTITDRFRPLN------MPQANGDNKPQE--------------AILP-GIFFVYELSPFMIEASRIR-MPFLHFVTKLCAIVGGVFTVLGVLDSILFRL 391
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: W7UAM5_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAM5_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.040e-84 Identity = 155/355 (43.66%), Postives = 214/355 (60.28%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHM---ENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRRRSSLLG 1029
TFH+++C +VHVDAMDVAG+NQ+ ++H+MLKQRL G IG PF E P + D+ P DYCGSC+ AR CCN+C+D+ AY G + I+ TA QC+ P+ +GEGC L GFMSVNKV+GNFH+A G+ V++DG+HIH + +A FN SHTI +SFG+ +PG R NPLDG + + + TGLFQYF+K++PT H G A GE A T++ S T +F+ L E E R GD H+D +LP GVFF+YD+SPF VE+ V ++P H L++LCA+AGG F++S ++D+V ++ L + L G
Sbjct: 103 TFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSSQGERIGFPFLEDPTDFDSKKADALLGAAPWDYCGSCFQARTHTGACCNSCQDLEQAYLTQGLPMGKIKTTAPQCLPGFQAPAPSGPMQKGEGCNLKGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHTIQHVSFGDEYPG-RVNPLDGKVKYVSSTVGTGLFQYFIKVIPT------HYKGRA----GE-AIRTNRISVTERFKPLHKEGEA---RLTGDSHAHNDQTS-----------VLP-GVFFIYDLSPFNVEVSTV-SVPFSHFLVKLCAIAGGVFSISRLLDNVFYYSGLFLGKGTGFLAG 429
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: B7FRC3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRC3_PHATC) HSP 1 Score: 243 bits (619), Expect = 1.040e-72 Identity = 147/361 (40.72%), Postives = 210/361 (58.17%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDG-IAIGEPFAEVPGEGDNSLE-------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMEN---PLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPG------MRPNPLDGASRIID-EDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDD----LPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRR 1008
TF S++C ++HVD MDVAG++Q++I+ + K+++ G E E + S + LP+ YCG CYGA+ D CCN C + DAY GW + TAEQCIR+ + PL++GEGC LSGFMS+N+V+GNFH+A GEG+ RDG+HIH+++ +D+ +N+SH IH LSFG G + + L+G ++++ E +TGLFQYF+K+VPT ++GP D S T+++ YT +FR L EY E A +D H H + +LP GVFF+Y++ PF VEI PV ++PL HLLIRL A GG F + VD+ V + R RR
Sbjct: 147 TFPSLACDDLHVDVMDVAGDSQLNIEDTLTKRKMDRTGRYGQAEILQSNQHEQEQSRKAKLRQDPLPDTYCGPCYGAQPDVDACCNNCDALLDAYKLKGWRTDLVLYTAEQCIREGRDQKKLRPLIQGEGCNLSGFMSLNRVAGNFHIAMGEGLQRDGRHIHVFDPEDSEHYNASHVIHHLSFGPEIQGKTKSGNLDSSSLNGVTKMVTPEHGTTGLFQYFIKVVPTT-YLGPGGRRDESGTFE-----TNRYFYTERFRPLM--KEYLPEEAVAEDPKQAAVHAGGGHRTHDHHHVRNSVLP-GVFFLYEIYPFAVEIHPV-SVPLTHLLIRLMATIGGVFTIVRWVDTAVLEGNPRNRR 497
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A1E7ETJ2_9STRA (DUF1692-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETJ2_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.400e-71 Identity = 152/372 (40.86%), Postives = 214/372 (57.53%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGP-DGIAIGEPFAEVP-----GEGDN-----SLELPEDYCGSCYGARK---DCCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDI-STGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLP-----------HHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVS-NRLRRRRSSLL 1026
TF ++C ++H+DA+DVAG++QI+I+ + K RL +G +V GE + + L EDYCG CYGA + CC TC DV +AY W ++ TAEQC+R D + +GEGC LSG+M+VN+VSGNFH+A GEG+ RDG+HIH Y +DA FN+SH IH+LSFG P PL+GA++I+ E STGLFQYF+K+VPT +VG G K+ E T+++ +T +F L E + E +GDD HH+ H ++++ +LP GVFF+Y++ PF +EI ++P HLLIRL A GG F ++ DSV+ S N R R SL+
Sbjct: 66 TFPGLACEDLHLDAIDVAGDSQINIEDTLKKIRLHEKNGRVYSRDEIKVELNAHRGEQEKKERILNENLDEDYCGPCYGAHEKEEQCCQTCDDVVEAYEKKKWKTELLQYTAEQCVREGRDRQEPKNMTQGEGCNLSGYMTVNRVSGNFHIAMGEGIERDGRHIHTYVPEDAPNFNASHIIHQLSFG---PEDGKEPLNGATKIVTEKTGSTGLFQYFIKIVPTT-YVGE---GSHFPKIDEAKMETNRYFFTERFMPLMTEL-LEDEHYEGDDYGKAAADAGYTGGHHNEDHHMKQNS-----VLP-GVFFIYEIYPFAMEITQ-NSVPFTHLLIRLMATIGGVFTLARWADSVLNERSRNNASRNRRSLI 422
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S2XV93_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV93_9STRA) HSP 1 Score: 231 bits (590), Expect = 8.050e-71 Identity = 125/265 (47.17%), Postives = 167/265 (63.02%), Query Frame = 1
Query: 217 CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEG--EGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPH--------PAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVV 981
CCNTC+++ +AY A+GW+L ++ AEQCIR+ + + EGC L+G + VNKV+GNFHVA GE V+RDG+HIHL++ ++A AFN SHT+HRLSFG+P+PGM NPLDG R DE+ TGL QYFV ++PT+ G H A D V + A LT+QFSYT +FR L K ER D P H ILP GVFF+YD+SPFM+E+ + PL HLL +LCA+AGG V+ ++D+ +
Sbjct: 38 CCNTCQELTEAYGAMGWSLGGLKNKAEQCIREKNTRQDISADAKEGCNLAGMLLVNKVAGNFHVAVGEAVVRDGRHIHLFDPEEAEAFNISHTVHRLSFGDPYPGMPTNPLDGRVRYFDEENGTGLLQYFVHIIPTIYSQGGHVDYTEINNQADDGQVITSD-ALLTNQFSYTERFRPLFDRP--KTERRDSM-TPRH-----------AFTPILP-GVFFIYDISPFMIEV-TYASTPLSHLLTKLCAIAGGVVTVAGVLDAAL 285
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S1D866_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D866_CYCTE) HSP 1 Score: 230 bits (587), Expect = 1.430e-68 Identity = 146/376 (38.83%), Postives = 210/376 (55.85%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNP-LDGASRII-DEDISTGLFQYFVKLVPT-------VRWVGPHPAGDASVKV-------GEPATL-TSQFSYTYKFRSLKGETEYKKERADGDDLPH------HDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRR 1011
TF S++C ++HVDAMDVAG++QID++ ++K+ L PDG V S + LPE+YCG C+GA+++ CC TC ++ +AY W + TAEQCIR D + +G+GC LSG+M+VN+V+GNFH+A GEG+ RDG+HIH + +DA FN+SH IH+LSFG PG ++G ++I+ DE +TGLFQYF+K+VPT + VG + A + G+ L T+++ +T +FR L E K + A+ DD H H + + ILP GVFF+Y++ PF VEI +P HLLIRL A GG F V S V++ + + R R
Sbjct: 75 TFPSMACEDLHVDAMDVAGDSQIDVEDTLVKKPLRPDGSPRSAEEIRVETNSHRSDQEKKEKILKEKLPENYCGPCFGAQEEDDQCCQTCDELLEAYKKKRWKSTLLMYTAEQCIREGRDKKEPKRMTKGQGCNLSGYMTVNRVAGNFHIAMGEGIERDGRHIHTFLPEDAPNFNASHVIHQLSFG---PGEEEAAAMNGVTKIVKDEHGTTGLFQYFIKVVPTTYRGKDMIARVGTEKSAQALPSLFEEVEDQGDDTVLETNRYFFTERFRPLMKEF-LKDDHAEEDDPKKAGVNAGHKGTHSNQDHHHVQNAILP-GVFFIYEIYPFAVEI-KTAAVPFTHLLIRLMATIGGVFTVVSWVEAALCAPGGKRRGR 444
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S1ZET6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZET6_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.950e-68 Identity = 149/393 (37.91%), Postives = 218/393 (55.47%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPG----------EGDNSLELPEDYCGSCYGARK---DCCNTCRDVADAYNALGWALHDIRRTAEQCIRDN--HMENPLV-EGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPL--------DGASRIIDE-DISTGLFQYFVKLVPT--------VRWVGPHPA---------GDASVKVGE------PATLTSQFSYTYKFRSLKGETEYKKERADGDD--LPHHDAAHGQEKDA--RLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRRRSSL 1023
TF S+ C ++HVD MD+AG++Q+ +D M+K+RL PDG +G +V EG + E+ ++YCG CYGA + CCNTC DV AY W ++ + AEQCIR+ ++ PL+ +GEGC LSG M VN+VSGNFH+A GEG+ +DG+HIH + +D FN+SH +H L+FG + + +GA++I+ E D +TGLFQYF+K+VPT VG P +KV E P T++F +T +FR L E + K+ + D + H A K + ++ ILP GVFF+Y++ PF VE+ V +PL HLLIR+ A GG F + VD++++ + R+R SL
Sbjct: 136 TFPSLHCNDLHVDVMDIAGDSQLGVDDSMVKRRLHPDGSPLGTKEIKVEANKAAEEHSKREGILAEEVGDNYCGPCYGAHETEDQCCNTCDDVQKAYKKKRWNSGEVVKLAEQCIREGVTSLQLPLMSKGEGCNLSGHMEVNRVSGNFHIAMGEGIEKDGRHIHQFTPEDTPNFNASHIVHELTFGPSLDSIFKKSIGVGQIAAMNGATKIVTEKDGTTGLFQYFIKVVPTSYRGTDLVTLVVGSSPTLTEKDSPLISFEKIKVSEEASDLEPVIHTNRFFFTERFRPLFTEWDDNKKNSGQLDTSIGHGSATKDGAKGSHHKVQNSILP-GVFFVYEIYPFAVEVRSV-TVPLTHLLIRIMATVGGVFTIVGWVDAMLYS-REKARKRAGSL 525
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A1Z5J8X2_FISSO (COPIIcoated_ERV domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X2_FISSO) HSP 1 Score: 227 bits (579), Expect = 2.400e-68 Identity = 141/362 (38.95%), Postives = 200/362 (55.25%), Query Frame = 1
Query: 1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEP-----FPGMRPNPLDGASRIIDEDI-STGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLK----GETEYKKERADGDD--------LPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVF 984
TF +++C ++HVD MDVAG++Q+DI ++K+RL G IG + + + LPE+YCG CYGA D CCNTC ++ DAY A W ++ T+EQC+R D + GEGC LSG++ VN+V+GNFH+A GEG+ RDGKHIH +N +D FN+SH IH LSFG F L+G S+I+ +TGLFQYF+K+VPT D+ V++ T+ + +T +FR L E +Y+ E +D H A D R NAV+ GVFF+Y++ PF V+I K +PL HLLIRL A GG F + + D++++
Sbjct: 4 TFPNLACEDLHVDVMDVAGDSQLDIFDTLVKKRLSRSGRPIGSDVLKAEANANQQRQEEKLRLLKEKLPENYCGPCYGANDDENQCCNTCDELLDAYIAKKWRTDIVQYTSEQCMREGRDKKEPKRMKRGEGCNLSGYLEVNRVAGNFHIAMGEGIERDGKHIHTFNPEDTPNFNASHIIHDLSFGASGTKVGFGEEPQKTLNGVSKIVTRQHGTTGLFQYFIKVVPTSYIT------DSGVRIA-----TNGYFFTERFRPLMKEYIAEDDYEDEDETDEDGKRTVAVQAGHAHKAKTSNHDVR-NAVL--PGVFFIYEIYPFEVQIRKNK-VPLTHLLIRLMATVGGVFTMFKLADNLLY 350 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17763.4673.1 >prot_H-elongata_contig17763.4673.1 ID=prot_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGback to top mRNA from alignment at H-elongata_contig17763:3611..6463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17763.4673.1 ID=mRNA_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2853bp|location=Sequence derived from alignment at H-elongata_contig17763:3611..6463- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17763:3611..6463- >mRNA_H-elongata_contig17763.4673.1 ID=mRNA_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig17763:3611..6463- (Himanthalia elongata Himel1 dioecious)back to top |