mRNA_H-elongata_contig17753.4669.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17753.4669.1
Unique NamemRNA_H-elongata_contig17753.4669.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: D8LH11_ECTSI (Zn-dependent peptidase, Cym1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH11_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 1.670e-99
Identity = 159/221 (71.95%), Postives = 183/221 (82.81%), Query Frame = 1 
Query:    1 QRAAGFTMISSTLRRSGFSGVSGARRGVIAFLGGT-----AAMPYSKSRWVST-LMSAAAVQSAAGGPSLKVVQKRESAQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNKTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQSKG 645
            + A  FTM+S  LRR+G      ARRG++AFLG T     ++ P + SRWVST +MSA+A    + GPSL V +++ES  H AY+V+EEDFVAEYGATTTLYKH+KSGAEVLSVQIDDDNKTIFPDNAYGVDSGGDP AIP+LTF+YFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLD YLS+FD S ADT  SQ+QWQKKK++PWRVTE+FPAGE SKG
Sbjct:   31 REATSFTMLSG-LRRTG------ARRGMMAFLGSTGVPSSSSTPKASSRWVSTAVMSASAQSVVSDGPSLSVSKRKESVAHDAYDVVEEDFVAEYGATTTLYKHKKSGAEVLSVQIDDDNKTIFPDNAYGVDSGGDPTAIPSLTFEYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDGYLSDFDASGADTSGSQVQWQKKKTEPWRVTEEFPAGEDSKG 244
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 4.030e-72
Identity = 158/357 (44.26%), Postives = 182/357 (50.98%), Query Frame = 1 
Query:    1 QRAAGFTMISSTLRRSGFSGVSGARRGVIAFLGGT-----AAMPYSKSRWVST-LMSAAAVQSAAGGPSLKVVQKRESAQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNK----------------------------------------------------------------------------------------------------------------------------------------TIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQSKG 645
            + A  FTM+S  LRR+G      ARRG++AFLG T     ++ P + SRW ST +MSA+A    + GPSL V +++ES  H AY+V+EEDFVAEYGATTTLYKH+KSGAEVLSVQIDDDNK                                                                                                                                        TIFPDNAYGVDSGGDP AIP+LTF+YFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLD YLS+FD S ADT  SQ+QWQKKK++PWRVTE+FPAGE SKG
Sbjct:   17 REATSFTMLSG-LRRTG------ARRGMMAFLGSTGVPSSSSTPKASSRWASTAVMSASAQSVVSDGPSLSVSKRKESVAHEAYDVVEEDFVAEYGATTTLYKHKKSGAEVLSVQIDDDNKVFGVTFRTPPEDSTGVPHILEHSVLCGSRNYPVKEPFVDLLKGSLQTFLNAFTYPDRTCYPVASQNLKDFYNLANVYLDAVFYPRAVSDPQVMEQEGWHYELEDTSDPLTYKGVVFNEMKGVYSSPDSLHGRTCQQTIFPDNAYGVDSGGDPSAIPSLTFEYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDGYLSDFDASGADTSGSQVQWQKKKTEPWRVTEEFPAGEDSKG 366
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.450e-39
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:  343 KTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQS 639
            + +FPDN YGVDSGGDP AIP+LTFDYFK FH+RFYHP NSR+YFYGDDP  KRLELLD+YLSEFD + AD   S IQWQK + +PW  TE FPA E++
Sbjct:  206 QALFPDNTYGVDSGGDPSAIPDLTFDYFKNFHRRFYHPANSRIYFYGDDPVPKRLELLDEYLSEFDRADADPAASTIQWQKMRQEPWSYTETFPASEEA 304
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A835ZGW9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.170e-38
Identity = 96/271 (35.42%), Postives = 110/271 (40.59%), Query Frame = 1 
Query:  223 HPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNKT----------------------------------------------------------------------------------------------------------------------------------------IFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPA 627
            HPAY+++ +DFV EYGA T LY+HRKSGAEVLSVQIDDDNK                                                                                                                                         +FPDN YGVDSGGDP  IPNLT+DYF+ FH+RFYHP NSRVYFYGDD   +RLELLD+YL EFD + AD   S IQWQKK+  PWR +  FPA
Sbjct:   30 HPAYDLVSQDFVQEYGAATALYRHRKSGAEVLSVQIDDDNKVFGVTFRTPPEDSSGVPHILEHSVLCGSRKFPTKEPFVELLKGSLQTFLNAFTYPDRTCYPVASQNTKDFYNLIHVYLDAVLFPRAASDPLVMQQEGWHYELEDPAQPLAYKGVVFNEMKGVYSSPDALHGRARKQALFPDNTYGVDSGGDPQDIPNLTYDYFQAFHRRFYHPANSRVYFYGDDAVPERLELLDEYLREFDAADADPAASAIQWQKKRGAPWRHSARFPA 300
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A7S2V8U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.640e-36
Identity = 95/278 (34.17%), Postives = 114/278 (41.01%), Query Frame = 1 
Query:  214 SAQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNKT----------------------------------------------------------------------------------------------------------------------------------------IFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQS 639
            SA HP Y++++ED+V E+GA TTLY+H KSGAEVLSVQIDDDNK                                                                                                                                         +FP+NAY VDSGGDP AIP+LTFDYFKGFH R+YHP NSR++FYGDD P KRLELLD YL EFDV      +S + +Q  K +PW + E FPAGE+S
Sbjct:   83 SAIHPNYQIIKEDYVKEFGAMTTLYRHLKSGAEVLSVQIDDDNKVFGATFRTPPEDSTGVPHILEHSVLCGSRNFPVKEPFVDLLKGSLQTFLNAFTYPDRTCYPVASQNTKDFYNLIHVYLDAVLFPRAVSDPLVMEQEGWHYELEKAEDPLTYKGVVYNEMKGVYSSPDSVMNRATQQALFPENAYSVDSGGDPNAIPDLTFDYFKGFHSRYYHPANSRIFFYGDDDPAKRLELLDSYLKEFDVPDQPA-KSAVDFQPLKQEPWYMKESFPAGEES 359
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A7I8J283_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J283_SPIIN)

HSP 1 Score: 129 bits (324), Expect = 1.000e-30
Identity = 70/167 (41.92%), Postives = 97/167 (58.08%), Query Frame = 1 
Query:  217 AQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNKT----------------------------IFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGE 633
            A+   ++ + E+ + E  +T  LYKH K+GAE++SV  DD+NK                             +FPDN YGVDSGGDP  IP LTF+ FK FH+++YHP N++++FYGDD P +RL +L   L ++D S     ES+I+ QK  S P RV E +PAGE
Sbjct:   16 AEKLGFKKISEEVIDECKSTAVLYKHLKTGAEIMSVINDDENKVFGIDFHTFQQEGCIMNLMIPLKRYPLKALFPDNTYGVDSGGDPKVIPKLTFEEFKDFHRKYYHPSNAKIWFYGDDDPNERLRILSANLDQYDKSPVSN-ESRIEPQKLFSTPVRVMEKYPAGE 181
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A7R9U8K2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.280e-30
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 1 
Query:  343 KTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQ 636
            + +F  N Y VDSGGDP AIPNLTF  FK FH RFYHP N+RVYFYGDD PL+RL +LDDYLSEF+    +   S IQW+KKK  PW+ T  FPA E+
Sbjct:  278 RELFSSNTYHVDSGGDPTAIPNLTFQDFKNFHGRFYHPSNARVYFYGDDDPLERLNVLDDYLSEFEPVDPN---SAIQWEKKKDAPWKKTSAFPASEE 372
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A6A6N500_HEVBR (M16C_associated domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6N500_HEVBR)

HSP 1 Score: 127 bits (319), Expect = 4.190e-30
Identity = 72/204 (35.29%), Postives = 102/204 (50.00%), Query Frame = 1 
Query:  211 ESAQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLSVQIDDDNKT---------------------------------------------------------------IFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGE 633
            E A+   +E + E+F+ E  +   L++H+K+GAEV+SV  DD+NK                                                                +FPDN YGVDSGGDP  IP LTF+ F+ FH+++YHP N+R++FYGDD P++RL +L +YL  FD S A   ES+I+ QK   +P R+ E +PAGE
Sbjct:   12 EVAEKFGFEKVSEEFIGECKSKAVLFRHKKTGAEVMSVSNDDENKVFGIVFRTPPHSTHIGTQCIMWVKKISLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKALFPDNTYGVDSGGDPKVIPTLTFEQFQEFHRKYYHPSNARIWFYGDDDPVERLRILSEYLDVFDASSAPN-ESKIELQKLFPEPVRIVEKYPAGE 214
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A803LE35_CHEQI (M16C_associated domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LE35_CHEQI)

HSP 1 Score: 126 bits (317), Expect = 8.110e-30
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:  337 DNKTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGE 633
            D + +FPDN YGVDSGGDP  IP LTF+ FK FHQRFYHP N+R++FYGDD P +RL LL +YL +FD S A   +SQIQ QK  S+P R+TE +PAG+
Sbjct:  309 DFEALFPDNTYGVDSGGDPNVIPKLTFEKFKEFHQRFYHPSNARIWFYGDDDPNERLRLLSEYLDKFDESSAPN-DSQIQPQKLFSEPVRITEKYPAGD 406
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BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Match: A0A7S1XMW9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.090e-29
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 1 
Query:  343 KTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRVYFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDFPAGEQ 636
            + +F  N Y VDSGGDP AIPNLTF+ FK FH R+YHP N+RVYFYGDD PL+RL +LD YL EFD   A    S IQW+ ++++PW VT  FPA E+
Sbjct:  202 RELFQSNTYHVDSGGDPTAIPNLTFEDFKNFHGRYYHPSNARVYFYGDDDPLERLNILDSYLGEFD---AVDPSSAIQWESRRTEPWSVTSKFPASEE 296
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17753.4669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH11_ECTSI1.670e-9971.95Zn-dependent peptidase, Cym1 homolog n=1 Tax=Ectoc... [more]
A0A6H5LB25_9PHAE4.030e-7244.26M16C_associated domain-containing protein n=1 Tax=... [more]
A0A835YY54_9STRA3.450e-3969.70Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A835ZGW9_9STRA1.170e-3835.42Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A7S2V8U1_9STRA1.640e-3634.17Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7I8J283_SPIIN1.000e-3041.92Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A7R9U8K2_9STRA1.280e-3062.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6A6N500_HEVBR4.190e-3035.29M16C_associated domain-containing protein n=1 Tax=... [more]
A0A803LE35_CHEQI8.110e-3061.62M16C_associated domain-containing protein n=2 Tax=... [more]
A0A7S1XMW9_9STRA1.090e-2959.18Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17753contigH-elongata_contig17753:1014..7139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.4
Seed ortholog evalue2e-80
Seed eggNOG ortholog2880.D8LH11
KEGG koko:K06972
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0031967,GO:0031974,GO:0031975,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0051604,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.metallopeptidase activity
EggNOG OGsCOG1026@1,KOG2019@2759
Ec32 ortholog descriptionZn-dependent peptidase, Cym1 homolog
Ec32 orthologEc-06_010790.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorymitochondrion
Exons3
Model size669
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17753.4669.1prot_H-elongata_contig17753.4669.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17753 1035..7139 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930026.8634152-UTR-H-elongata_contig17753:1013..10341622930026.8634152-UTR-H-elongata_contig17753:1013..1034Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17753 1014..1034 +
1691679251.8964055-UTR-H-elongata_contig17753:1013..10341691679251.8964055-UTR-H-elongata_contig17753:1013..1034Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17753 1014..1034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930026.8770397-CDS-H-elongata_contig17753:1034..13581622930026.8770397-CDS-H-elongata_contig17753:1034..1358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 1035..1358 +
1691679251.905543-CDS-H-elongata_contig17753:1034..13581691679251.905543-CDS-H-elongata_contig17753:1034..1358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 1035..1358 +
1622930026.8899486-CDS-H-elongata_contig17753:6366..65221622930026.8899486-CDS-H-elongata_contig17753:6366..6522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 6367..6522 +
1691679251.912839-CDS-H-elongata_contig17753:6366..65221691679251.912839-CDS-H-elongata_contig17753:6366..6522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 6367..6522 +
1622930026.9026115-CDS-H-elongata_contig17753:6971..71391622930026.9026115-CDS-H-elongata_contig17753:6971..7139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 6972..7139 +
1691679251.922535-CDS-H-elongata_contig17753:6971..71391691679251.922535-CDS-H-elongata_contig17753:6971..7139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17753 6972..7139 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17753.4669.1

>prot_H-elongata_contig17753.4669.1 ID=prot_H-elongata_contig17753.4669.1|Name=mRNA_H-elongata_contig17753.4669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MISSTLRRSGFSGVSGARRGVIAFLGGTAAMPYSKSRWVSTLMSAAAVQS
AAGGPSLKVVQKRESAQHPAYEVLEEDFVAEYGATTTLYKHRKSGAEVLS
VQIDDDNKTIFPDNAYGVDSGGDPVAIPNLTFDYFKGFHQRFYHPGNSRV
YFYGDDPPLKRLELLDDYLSEFDVSCADTMESQIQWQKKKSQPWRVTEDF
PAGEQSKGERASLFS*
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mRNA from alignment at H-elongata_contig17753:1014..7139+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17753.4669.1 ID=mRNA_H-elongata_contig17753.4669.1|Name=mRNA_H-elongata_contig17753.4669.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6126bp|location=Sequence derived from alignment at H-elongata_contig17753:1014..7139+ (Himanthalia elongata Himel1 dioecious)
CAGAGAGCAGCCGGGTTCACGATGATTTCGAGCACGCTACGTCGCTCGGG
CTTCTCCGGGGTGTCGGGAGCCAGACGGGGAGTGATAGCCTTTCTTGGTG
GAACAGCGGCTATGCCTTACTCTAAGTCTCGCTGGGTGAGCACGTTGATG
TCCGCTGCCGCTGTGCAGAGCGCTGCTGGAGGGCCATCCTTGAAAGTAGT
CCAGAAAAGGGAGTCTGCGCAGCACCCCGCCTACGAGGTTTTAGAGGAAG
ACTTCGTTGCAGAATACGGTGCCACGACGACGCTCTATAAGCACAGGAAG
TCGGGAGCGGAAGTGCTTAGCGTACAAATCGACGACGACAACAAGGTAGG
AAGTGGCCAAAGACCGAATAGGTGTCGGTGACAGGTATCACGTCAGCGCG
GCCGCTCGTCTCCACTGCATGCTAGCTCTACTCTTGAAAGTAAAGCTGAA
TTACTTGTGGATTCCTTATGTAGAATCTCAGAGAAAACGCAGAATGTAAG
CAAGTAAAGTCCAACCATAGGTCGATGAGGTGCTAAGGTTCTGAATTTGC
ATCGCGATTAAACAGCGCATGCGTAACGTGACCAAGCGAATAAGAGGTAC
AGGAGATATCAAGCACGACACGCCTGATTCTGTGGCGACGTTGAAACTGT
AGAGCAGCAACTTGAAAACCCATATAGAAACAGATCAAACATGAAAACCC
CTCCAGATGTATCGTAGGCGTGGATGTATTAATGAGTGGATATGTTTTTA
GAGGTAATATATTAATCCTCTACTCATTTATAGGAAATGAAAATACCGTG
TATTTTAAGGACGTCGCCTCTCTGATGAGGACCATCTATCCTCGCTGACC
AGGCTGTCTTTGCTGCTGTAAACTCGAGCTAAGAGCGTGGAATGCACCAT
TGGGGACGCCACCTTCGTCATCCCCCGCCCCCCGCCGCTGACAGGAAACC
CGGCACCCGGCCGAAGAGCGCAATTAATAGTGGAATGCTGCCGAAATTAT
CTTCACCTTGCACTTTGTCGTCTGCTGACTCTCGTACGCACTTTGTCGTC
TGTTTCCTTGAAGACTAATACCAAGTGTACGAAGCGCACAAAACGATCAC
CGGGTATTCAAATTATTTTTCTTGAAAGAACATATGAATTCATTCAAACC
CTCCAAACATCCACGCCTTCTTAGCACCGTTAGAGGTTCAGTTCAGGGTA
CCAACAATGGTCAGGTTCGAATATGTACCATAGTACATTTTGAGCTCTAA
ATCGTCACATGTGGTTAATCGTGTTAATAGTAAATTCATCGGGTCAACGG
TATAATAATGTCGGGGAGATGTCCATCATTATCCCGTGCACTTACATTAT
TCATTATTCATCATATGGAGACGCCAAACCAGAGCTTAGAGAGTGGGCTG
TAAAAAGTAAGATTTTTTTCTTCATTGTAAGGCATATACAACCTCTTAGT
ATTACTAGAGATATTGGTGAGTTATTAGTGTATATTTGGTAGTTATTAGT
ATTAGAAGAGGTGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGCATGTT
TTTTTGTGTGTTTAGGAGGTGTGGGGGGGTNNNNNNNNNNGGGTAAGCGG
TAGTGATATGTACTGGATGTCGCTTCTCAAAGGAGACCCATACCCAGCGA
TCTATGTTGCAATATGCGACAAATATCGGGTCAGCGAATAACTGAGGCAC
GATCTTTGCGTTGGCACGGTCTCGTCTGATTCCGGGTGCGAAATGTATGG
AGGCGTAGTCTATCCCGGGGCCTAACATGTAGGCCTAGACAAACGATAGA
ACGATATGGGGTGCATATGATAGCCACTGATCTATACCTGGTAGCAGAAT
TGAGTGCTACACAGAAATCTCTAGTTGCAGTAACGCGGAACACTTACGGT
AAAAAAGCGTTTAATTCGTTTAACCTCCCTTGAGTGGACAACCACGCTCT
AAAGTGGTCCAGAGAAGTTGAACTGAACCAAGGCGTTCGCTTGTAACATA
TACCTCATTAGAAGCAGATGGCAAAACACATTTCCAACAAATGTGGTCAC
CCAAGAGCATCCATGCCTTGGGGTGTATTCACAAGAGTCACTTCCTGGGT
GCGGCACTAAAGTGCATCCCGCATGCCGGTACATTTTAGATAGAGGTGCC
GTTGACCTAGAGGCTTCGTGGAACAGTTGCTCCGCATCCACTGCTCTCCG
ATTCGCGTTAAGCAACGAAAAAAATGTACCGTACGTAGTAGTATACTATT
AATAGAAGTAATATGAATAGTATTGGAGGAGGAGGAGTAAGTGATAGTGG
TAAGTCTCTCCTGTCTTGCGAGATGCTGACGTTAACAGATCGGCGAGAGG
TGATTGGGGAGATATAAAGCAATGTAAGATCAGCGCAGAATACGCCATTT
GAAGCGCACTCCCCGTACGGTAGTAGATTATCACCTCGTACGCGAACAGT
AACCCGCTGCTTCGTTCTTCGAAGAGTATGCTGACCGGAATAGATTTTCA
CTCCGCCGGAGAAAGAAAGAATGCTGCGGATAATGCTGTGGTTTGCATTT
TAAAAAATATGCCGCTTTTTCTTACAAGCTTCTCCCGGGCGAGGGGCAAA
TGTCTCTCGGCTGTTGCGACCCGCATGATCGAGCTCCATTATTTTCGAAG
GCTGGTGATTTTATATTAAGAGTCTCGAGTTAGGCACACCCACCAGACAC
GCTCGTCCACTTGCGCCCCCTATCCGTTCTGCATTAACGCCTCCACAGGT
TTTCGGCGTGACATTCCGCACCCCTCCCGAAGACAGCACCGGCGTGCCTC
ACATCCTGGAACACTCCGTGCTGTGCGGTAGCCGTAAGTTCCCCGTGAAG
GAGCCCTTCGTAGATCTCCTCAAGGCCTCCCTTCAGACGTTTCTCAACGC
CTTCACCTACCCCGACCGCACCTGCTACCCGGTGGCGTCTCAAAACCTGA
AGGTGCCCACCTTCTTGTCGTTTATCCTTGCTCCTGTTCTCTTCTGTAGA
AAAGCCACTTCATAAGTACTATACATTCAATTAAGTGTGGGATTTTGGCA
GCGCCGACGAGTGGAGCGTGTTTTTGGTACGAGTCACCCGTAAGAGTTAT
GTCTATGGTGGAAGGGCGCTTTAGAAGGGTAGTAGGTGTTTCCAGGGGTA
GTATAGATATATCTATATCTATATCTTGTGTGTGTGTAGATCTCCGTTGA
TGCTAGTTTGGGATTGCGCGGTCCAGCAGATGTCAAATTAGTCGCTACGG
TCTCTCGAATACCTCCCACATATATCTCTCCCGATGATCGTCGTGTCAGT
ATTCGAGGTTCCAATCACGACGCCTTTTTCTTGTATGTATTGTAGTCTCT
TGAGTGTTTGCTCTTTTCTCATTGCGTCTCGTGCTGCAGGATTTCTACAA
CCTCATGAACGTGTACCTTGACGCGGTGTTCTTTCCAAGGGCCGTCCACG
ACCCACAGGTGAATGGCGAACACAGTCGATGATAAGTAGAAACCCCGGGC
TCCCGTCATAGCCCCCACTGGTTGCACATCGATGCGGGTCGGGTCTGCCA
TCCTGCTTTTTGACTTGATTACCAAACGCACTTCGCGCCGTGGGCTAAGC
GATTTACAGATCTAAAACTAGAGGCGATGATCGCGTCCATCGCGAAGACA
GTCTCTATCGGCCTCGCCAAGGATAATAACTAAATTACACATGTGGTCGA
TTGTCGATTATATCGTGTGCTTGAGATAGGGCGCGTTTGCCTCTATCTCA
TTCCAACCATCCGAACATCCACGCCTTCTTAGAACCGTGAGAAGTACAGT
CCAGGGAACCAAGTATGGTCACCTTCGAATGTGTACACTACTACCTTTGA
GCACAATATCGTCCCATGTGATTAATCGTGTCCCCCATTAGTAAATTCAT
CGGGCCAACGGTGTAATTAATATGTACGATCTTATGATTATCCCGTACAC
TGACATAATTCATCATGTAGGGACTATGACGCCAGAGCTACAGTATAGCC
TAGAGAGTGAACTGTAGTTAGGAAGGGTTGTGAGGCGTAGGTATACGAGA
CGGGGTGCAGGAGAGAGGAATAGGCATATTATATATACTATTATATATAC
TATTATATATACTATTATATATACTTCATTGGTCAGGCGTGATAGAGATG
TTGCTGTTTCTGTGTATCAACTTACTAGTAATAGACGATATAAACTACTG
TAGGAATGCACTTCTACCATAATGTTAAATGAACGTTCGAGAAAATGATA
GGCAAGGGTGAGGTAAGGTAAGAAATTATAAACCATGTTCCTCGGATTTT
ACAGGTAATACAAAAGGGGTACCATGAGGGCGATGTACAGCGGTAAGGCT
CCGAGTATGATGTCCTCTCTCGTTCCTTCGCTCGGTCTTGGTTTATATAA
AGCGCAAGCCTGGCTCAGACCAAACATTTTTACATTTTACAAAGCAGCCC
TGGAGGGTCAACAGAACCGCGGTAATACGGTTGAGGAGCCACTCCTCCCC
GTAGTGGTGTAGTGGTGTGTGCCTCTACGCGGTGAAATAATTACGCCGCA
TTTTATGACATCGGAGTTGTCGTTCACCACCACGCCCGCCCACGGTACGA
TATTATTCGGTTCTTGTTTGCCATAGGTGATGCAGCAGGAGGGATGGCAC
TACGAGCTGGAAGACAAGAAACAGCCGCTGACGTACAAGGGGGTGGTTTT
CAACGAGATGAAGGGGGTTTACTCCTCGCCCGACTCGCTTCACGGCCGCA
CCTGCCAGCAGGTGAATGCGCGGCGGAGGCGACTGTTCTAATTTTGCCTG
GGAGGGGTGAGCAGAGAGCAAAAAAAAAGAGAGTTAAAGCGCTTGCGCAT
GAATCACTCACCATTGTATTTGTTGCACAAACGATTTTAACTCTACCTAC
TTATAGCGTATCTGGGATTCAAATCGTCTTTGTTTTTTGTTTTTTGTTTT
TTGCTTTTTTAACTTCATTAATATTATTTTTATTATTGTTGTTTTATTTT
TAAGTACCATAAGGTCGTGTGTAGACAAACGCACTTGTAAATATGCGAGA
GAGGCGTGTGGCGTACTGTAAAATTATCACGCCATCCTCCTCTTGAATCT
TCGCTCGTGGTTTGGCGCTTTCCGTGGCGTTTTCCCTCCCGGGTCAGCGT
TGAATGCTGAAAAAACGCCGCATTAGGTGGAAACCCTCGCGGCGTTAAGG
AATGGGAAGAATTGGTGTCCTGTAGATGGCCGCGCCCGCTACTAGAAAGA
AAGCAAACGCCGTTGTTTTTCGAACTGTTGTGCATCCACGCATACACCGC
TCGCACATCTTGCTTCTCCGACCAACCGCTGTCATGTTGCCCTTTGCGAA
CAGACCATATTCCCGGATAATGCCTACGGAGTGGACTCCGGGGGAGACCC
CGTCGCCATCCCCAACCTGACGTTCGATTACTTCAAGGGCTTCCACCAGC
GCTTTTACCACCCGGGAAACAGTCGCGTGTACTTCTACGGGGACGACCCC
CCGCTCAAGGTGTATTACGTTTGTAAAGGATCTTTGAGACAAGAGACAGA
GAGAGCGATAGAAGGAAGGAATTGGGAACGACGCCGTGAGGGTTTCCGTT
AGATAAGGAGGCTTGATGCTGTGCAAGGCCAAACGGTCACGAGACTTACG
GTTAGCAGACGTCAAAGGGTTTTTTTAGGACGAAGAGGGGAACCAATGGG
GGGGGGGGAGGGGGGATTGGCGTTTGTCTCATAGGTGAGGTTTCGTCTCG
TGTTTGCGGCACCACTACTTGCTGTTTGCTGTTTTTTGTTGTACCGTTGT
ATCAATCCTTCGGTCGCTTAGAAAAACCGGATGCAAAGACGAGAAGCATC
CAGAGACTGTGTAACGGCCTTCTTGTCCCCCTTAGCTGACCCCCCCTGGC
ATCCCCTCGTCTCCGGCCCTTTTTTCTCCTGTTCCCGTCGATCCCTTATT
TTGTTCAGCGACTGGAGCTTCTGGACGATTACCTGTCTGAGTTCGACGTG
TCTTGCGCAGACACCATGGAGTCTCAGATCCAGTGGCAGAAGAAAAAGTC
ACAGCCCTGGAGGGTGACCGAGGACTTCCCCGCCGGAGAGCAGAGCAAGG
GTGAGCGAGCTTCACTGTTCTCGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig17753:1014..7139+

>mRNA_H-elongata_contig17753.4669.1 ID=mRNA_H-elongata_contig17753.4669.1|Name=mRNA_H-elongata_contig17753.4669.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig17753:1014..7139+ (Himanthalia elongata Himel1 dioecious)
ATGATTTCGAGCACGCTACGTCGCTCGGGCTTCTCCGGGGTGTCGGGAGC
CAGACGGGGAGTGATAGCCTTTCTTGGTGGAACAGCGGCTATGCCTTACT
CTAAGTCTCGCTGGGTGAGCACGTTGATGTCCGCTGCCGCTGTGCAGAGC
GCTGCTGGAGGGCCATCCTTGAAAGTAGTCCAGAAAAGGGAGTCTGCGCA
GCACCCCGCCTACGAGGTTTTAGAGGAAGACTTCGTTGCAGAATACGGTG
CCACGACGACGCTCTATAAGCACAGGAAGTCGGGAGCGGAAGTGCTTAGC
GTACAAATCGACGACGACAACAAGATGATTTCGAGCACGCTACGTCGCTC
GGGCTTCTCCGGGGTGTCGGGAGCCAGACGGGGAGTGATAGCCTTTCTTG
GTGGAACAGCGGCTATGCCTTACTCTAAGTCTCGCTGGGTGAGCACGTTG
ATGTCCGCTGCCGCTGTGCAGAGCGCTGCTGGAGGGCCATCCTTGAAAGT
AGTCCAGAAAAGGGAGTCTGCGCAGCACCCCGCCTACGAGGTTTTAGAGG
AAGACTTCGTTGCAGAATACGGTGCCACGACGACGCTCTATAAGCACAGG
AAGTCGGGAGCGGAAGTGCTTAGCGTACAAATCGACGACGACAACAAGAC
CATATTCCCGGATAATGCCTACGGAGTGGACTCCGGGGGAGACCCCGTCG
CCATCCCCAACCTGACGTTCGATTACTTCAAGGGCTTCCACCAGCGCTTT
TACCACCCGGGAAACAGTCGCGTGTACTTCTACGGGGACGACCCCCCGCT
CAAGACCATATTCCCGGATAATGCCTACGGAGTGGACTCCGGGGGAGACC
CCGTCGCCATCCCCAACCTGACGTTCGATTACTTCAAGGGCTTCCACCAG
CGCTTTTACCACCCGGGAAACAGTCGCGTGTACTTCTACGGGGACGACCC
CCCGCTCAAGCGACTGGAGCTTCTGGACGATTACCTGTCTGAGTTCGACG
TGTCTTGCGCAGACACCATGGAGTCTCAGATCCAGTGGCAGAAGAAAAAG
TCACAGCCCTGGAGGGTGACCGAGGACTTCCCCGCCGGAGAGCAGAGCAA
GGGTGAGCGAGCTTCACTGTTCTCGTAACGACTGGAGCTTCTGGACGATT
ACCTGTCTGAGTTCGACGTGTCTTGCGCAGACACCATGGAGTCTCAGATC
CAGTGGCAGAAGAAAAAGTCACAGCCCTGGAGGGTGACCGAGGACTTCCC
CGCCGGAGAGCAGAGCAAGGGTGAGCGAGCTTCACTGTTCTCGTAA
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