mRNA_H-elongata_contig17744.4664.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A0A6H5K156_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K156_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 3.760e-125 Identity = 400/1142 (35.03%), Postives = 474/1142 (41.51%), Query Frame = 1
Query: 4 GEVLHLLAAVLHLRGKHLHPQPAEDSNGNVLLWNGE------VFDGLEVGPSESDTGKVLQALSGTRSHEEVVETLARISGPFSFVFWCLSRRELYYGRDAVGRRSLVARRPRTPQEPLIVMSCLPRRPVLA--GGCSS-NPAAMSAPA-------GAHGIAETGSPQP---------SIGVPFCGIDD---------------GAKGCWEEVSASGVYSLSL-GLSLP----GGRSPGGEWNAPSLKLHAWPASCVIGEGDGGSTTDSSTGDGHPAGVSDGINPGERGDGASQIPSLSPXXXXXXXXXXXXXTSLTTSGSR----GCTTVGLV--DEGQSIQPVCRDCMGPPTVEGNRQGPEDWWRGERGGKTPPREASAGCNEDEILGKSSRGMAERGRMSPAAVGLLGRLRDSIDRRVRSVPRP---------EACSWVEGMHISGAGDTCLAAESNVVPGRSQR-GEGTEARDATLAGA-SGPDGGGRIQSDGQ----------WCIAEKCNVGSPARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPL---------------------------------------TPSDPRS--------EGPTLVPLSTQLDLETPTGPASDTERTDIHIH-------------------------------------GVESQGKLNGDK-------KETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLDAAVSAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------PTDESTSER------------------------------------------------------------------------RQRLYKARALAEALRALEVHLATHFVE-LSTPFQAGELASLLERDIESSRRRVRAERSQHLCLLALESRPARGGNAAAIAERLSTKWCPAHKKLRSRGAQGDDCSHATSAWESAEAGAEQKPRGRSAAQATYTSKARVLLVGIGADEFMGGYSRHRNVYRRG 2694
G LHL+AAVLHLRG L QPAED++GNVLLWNGE VFDGL+VGP ESDT VL+ LS T +H EV L ISGPFSFV+WC RR LYYGRD GRRSLV RRPR+ E ++V+SCLP++ G CS NP + PA E QP + GV G A+ WEEV A G+Y LS G S G R G W AP +L+ W + PG G S+ SL LT G R G VG+ DEG ++ V + E GG+ R + G + GLL RLR SI RRV ++P P A S G + AES PGR G+ A DA A + P R+ DG ARVG+LFSGGLDSVVLAALLAE G + RG VP+GEPIDLINVCFDSP+GH SPDRLAS A GEL+ LFP HAWRLVCV+ASY DV+ VWRVMQPC TTMDFNIAAAF+FASRG+GWLYQ QPP TP D GP ++++ +P AS T GV G + + S KVNKN + LCPV GCRRLL PGC CSRCCLKAQGL++AA + XXXXXXXXXXXXX A P D +T + RQRL+KA A EA RALE HL F E LS PF+A ELA+LL R +C+ + + R A + +WCP H++ R +G + + E+ A E +P G SA + T S ARVLLVGIGADEFMGGYSRHRN + RG
Sbjct: 43 GWTLHLMAAVLHLRGDELCAQPAEDAHGNVLLWNGEARAWRVVFDGLDVGPGESDTAAVLRTLSSTCNHHEVAAALGGISGPFSFVYWCPGRRALYYGRDPAGRRSLVLRRPRSSGEKIVVLSCLPKKKSTEPPGICSPVNPTVSATPAHXXXXXXXXXXXXEFDDRQPPATVIDADDTAGVVAVGRXXXXXXXXXXXXXXXVVAAESDWEEVRADGIYVLSSDGTSATTSDGGARVDGNGWTAPRPQLYRWS-----------------------------VRPGS---GLSEA-SLG----------------LTPPGQRQRITGGDDVGVSAGDEGSKVEAVSNER-------------------EEGGR---RLGTWGSDXXXXXXXXX----------XXXXGLLERLRGSIRRRVCTIPHPASRRFNRRRRAASGDGGREEAKPQGFRGCAESEK-PGRGNGLGDALRAEDAAACAADTRPQ---RVWHDGAAGXXXXXXXXXXXXXXXXXXXXARVGILFSGGLDSVVLAALLAEEGA-QGRGPAVPKGEPIDLINVCFDSPSGHQSPDRLASFAAAGELKRLFPSHAWRLVCVDASYGDVLGRTEAVWRVMQPCSTTMDFNIAAAFWFASRGEGWLYQPLVQPPSTXXXXLDSGVNAGADGEAPGPAAALKVVPKVGGXXXXXAICGTPGDSPPLAAVVGVFRGPAAADGVSRVERPSPVTAASSTAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXATAASAXXXXXXXGTGVSQNGXXXXXXXXXXXCPRSRATEAMASGSAKTKVNKNGDELCPVDGCRRLLLPGCVLGTCSRCCLKAQGLIEAATAXXXXXXXXXXXXXXXXXLERARGLPGTPIGRAAXXXXXXETIPPDTATERKETXXXXXXXXXXXXXXXGEPMTANDHEGETATVAVTXXXXXXXXXXXXXXXXTPAEALPPSEGVDATTSAAERQRLFKAHAEEEARRALEGHLLERFDEDLSAPFRAEELAALLLLSPPLRRENNSGPSQAEVCIPSHDQRRLDPDAGARQGRQRPVRWCPVHRRFRRKGEERGE-------RETEAAAGEPRP-GTSATRVT--SAARVLLVGIGADEFMGGYSRHRNAFNRG 1088
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: D7G9H9_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H9_ECTSI) HSP 1 Score: 337 bits (865), Expect = 6.930e-97 Identity = 331/1046 (31.64%), Postives = 397/1046 (37.95%), Query Frame = 1
Query: 4 GEVLHLLAAVLHLRGKHLHPQPAEDSNGNVLLWNGEVFDGLEVGPSESDTGKVLQALSGTRSHEEVVETLARISGPFSFVFWCLSRRELYYGRDAVGRRSLVARRPRTPQEPLIVMSCLPRRPVLAG---GCSSNPAAMSAPAGAHGIAETGSPQPSI----------------GVPFCGIDD---------------GAKGCWEEVSASGVYSL-SLGLSLP----GGRSPGGEWNAPSLKLHAWPASCVIGEGDGGSTTDSSTGDGHPAGVSDGINPGER--GDGASQIPSLSPXXXXXXXXXXXXXTSLTTSGSRGCTTVGLVDEGQSIQPVCRDCMGPPTVEGNRQGPEDWWRGERGGKTPPREASAGCNEDEILGKSSRGMAERGRMSPAAVGLLGRLRDSIDRRVRSVPRP---------EACSWVEGMH-ISGAGDTCLAAESNVVPGRSQRGEGTEARDATLAGASGPDGGG-RIQSDGQWCIAEKCNVGSP-----------ARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLDA------AVSAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTDES-----------------------------------------------------------------------------------------------TSERRQRLYKARALAEALRALEVHLATHFVE-LSTPFQAGELASLLERDIESSRRRVRAERSQHLCLLALESRPARGGNAAAIAERLSTKWCPAHKKLRSRGAQGDDCSHATSAWESAEAGAEQKPRGRSAAQATYTSKARVLLVGIGAD 2646
G LHL+AAVLHLRG+ L QPAED++GNVLLWNGEVFDGL++GP ESDT VL+ LSGT +H+EV L ISGPFSFV+WC RR LYYGRD GRRSLV RRPR+ E ++V+SCLP + C P PA H AE P + GV G A+ WEEV A G+Y L S G S G R G W AP +L+ W G + G P ER G + GS G DEG ++ V + EG R+ LG GLL RLRDSI RRV ++P P A S +G G A PG A A A AS D R ++D ARVG+LFSGGLDSVVLAALLAE G E RG VP+GE IDLINVCFDSP+GH SPDRLAS+ AVGEL+ LFP HAWRLVCV+ASY DV+ VWRVMQ +R G P+ T E++ K+ KVNKN + LCPV GCRRLL PGC CSRCCLKAQGL++A A SAPR P D + +++ RQRL+KA A EA RALE HL F E LS PF+A ELA+LL R +C+ + + R A + +WCP H++ R +G + EA A + G SA + T S ARVLLV G +
Sbjct: 43 GWTLHLMAAVLHLRGEELCAQPAEDAHGNVLLWNGEVFDGLDIGPGESDTAAVLRTLSGTCNHQEVAAALGGISGPFSFVYWCPGRRALYYGRDPAGRRSLVLRRPRSSGEEMVVLSCLPEKQSTEPPGISCPVKPTIPVTPAHHHARAEDDERPPQVDDRQPQATAIDTDDAAGVVAVGXXXXXXXXXXXXXXXXXVAAESDWEEVRADGIYFLTSDGTSATTGDGGARVDGNGWTAPRPQLYRWSVRPEAGLPEAGRVL---------------TPPSERQRDTGGDDV-----------------------GGSAG-------DEGSKVEAVSNE-----REEGGRR----------------------------LGTEGSXXXXXXXXXXXXAGLLERLRDSIRRRVCTIPHPASHRFDRRRRAASGDDGREEAKPQGFREFAESEKTGPGNGL----ANALHAEGAAASATDTRPQRARNDXXXXXXXXXXXXXXXXXXXXXXXXXARVGILFSGGLDSVVLAALLAEEGA-EGRGPAVPKGEAIDLINVCFDSPSGHQSPDRLASIAAVGELKRLFPSHAWRLVCVDASYGDVLGRTEAVWRVMQ-----------------ARNGGXXXXXXXXXPRRRAT----------------------------------------EAKAKVKT-----------------KVNKNGDELCPVDGCRRLLLPGCVLGTCSRCCLKAQGLIEATSAPTAAASAPRRSVPPLEKARGLPGSPIGRAAAATATAEATPPDTANERXXXXXXXXXXXXXXTIGASQDRASCSLGASDSVVSPPERTAPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATTSADERQRLFKAHAEEEARRALEGHLLERFDEDLSAPFRAEELAALLLLSPPLRRENNSGPGQAEVCIPSHDQRRLDPEARAGQRRQRPVRWCPVHRRFRRKGEERGG--------RETEAAAGEPWPGTSATRVT--SAARVLLVFRGGE 921
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A0A5D6Y860_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y860_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.690e-34 Identity = 142/453 (31.35%), Postives = 187/453 (41.28%), Query Frame = 1
Query: 1345 PARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVL---ESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLDAAVSAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTDESTSERRQRLYKARALAEALRALEVHLATHFVELSTPFQAGELASLLERDIESSRRRVRAERSQHLCLLALESRPARGGNAAAIAERLSTKWCPAHKKLRSRGAQGDDCSHATSAWESAEAGAEQKPRGRSAAQATYTSKARVLLVGIGADEFMGGYSRHRNVYRRG 2694
PARV VLFSGGLDSVVLAAL P EP+DL+NVCFD+ +G SPDRLA+ ++V ELR LFP AWR V V+ + V DV +M PCDT MDFNI AAF+F +R +G + P+ QL L + + G + +L + R L +SD G ++ CP+G C+R KPGC F +C CCLK LLD LR H + ++ F G ++S Q LL + S+ ++ +A R + PA + R R + A S + +A AE R R A+A YTS ARVLLVGIGADE +GGY RH+ + G
Sbjct: 316 PARVAVLFSGGLDSVVLAALAH---------FHAPAREPVDLLNVCFDAASGFRSPDRLAAELSVAELRALFPARAWRFVRVDVPFAAVRAHQRDVAALMAPCDTHMDFNIGAAFWFLARAQGRQTTTAPE--------------------AGAQLQL---------ADLNAFLVRGEAAAAELRALEAAVRALRLCGHDSDSAGDSRDE-----CPLGACKRKKKPGCVFGICRLCCLKTHKLLDK----------------------------------------------------------LRRDTTHPSERLKSTTSLFDMGVVSS----------------DEQLQALLTVLSQHTADDDSERLASRAT--GAPACRVHRQRVHPSASVATAQST-DRDDAAAE---RARDTAEA-YTSPARVLLVGIGADEQLGGYGRHKTAFETG 644
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: G4YU12_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YU12_PHYSP) HSP 1 Score: 141 bits (356), Expect = 1.330e-31 Identity = 98/239 (41.00%), Postives = 118/239 (49.37%), Query Frame = 1
Query: 1345 PARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQ 2061
PARVGVLFSGGLDSVV+AAL V EP+DL+ VCFD + TSPDRLA+ +A EL LFP W LV VN D+ ++ S+V +M PCDT MDFNI AAF+F SRG G L Q+ P E T+ L+ L +R D+ + ET + LE GGK + LCPV C R K GC VC CC K Q
Sbjct: 171 PARVGVLFSGGLDSVVIAALTH---------FHVAVDEPVDLLTVCFDESSAFTSPDRLAAELAHAELCALFPSRQWNLVKVNVPRVDLSKQQSEVLTLMAPCDTHMDFNIGAAFWFLSRGLGELKQTAQAP------------ENATMEELNAFLK----------PQRADLR-------------ELETEVAFLELF--GGKAESDNTLLCPVDRCGRKRKHGCIVGVCKSCCFKMQ 363
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A0A8K1CDZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDZ2_PYTOL) HSP 1 Score: 141 bits (356), Expect = 5.870e-31 Identity = 140/452 (30.97%), Postives = 188/452 (41.59%), Query Frame = 1
Query: 1333 NVGSP-ARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLDAAVSAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTDESTSERRQRLYKARALAEALRALEVHLATHFVELSTPFQAGELASLLERDIESSRRRVRAERSQHLCLLALESRPARGGNAAAIAERLSTKWCPAHKKLRSRGAQGDDCSHATSAWESAEAGAEQKPRGRSAAQATYTSKARVLLVGIGADEFMGGYSRHRNVY 2685
N SP A VGVLFSGGLDSV+LAAL V EPIDL+NVCFD+ +G SPDRLA+ V+ EL TLFP W L+ VN +E V+ ++ +M PC+T MDFNI AAF+F SRG+G + +D S P V L+ L + ++ + G+ + N++ E CP CRR LKPGC +C CC +A+ LL TD T + R+R+ KARA ALE L + ++ST + +L + E+ R R + A E++P +S EA Q+ A YT++ARVLLVGIGADE +GGY RH+ Y
Sbjct: 305 NDASPHAYVGVLFSGGLDSVMLAALT--------HFHVVAPDEPIDLLNVCFDATSGFQSPDRLAAEVSFHELCTLFPTRKWNLIRVNIPFERVLEHQREIAALMTPCETHMDFNIGAAFWFLSRGQGHVR-------------ADTSSAAPNGVDLNAFLRANRASAAQEAADKA-LKALGLFA------------------------TNESSE-FCPAANCRRKLKPGCPLGICRVCCTRARKLL--------------------------------AKLHVDTTD--TVDARERV-KARA------ALEGMLPSTSQDVSTRIE--DLVRVYEQHFSVEDEVCRVHRIKTKAPTASEAKP-----------------------------------------DSQEAPVPQQEHSEQA----YTTRARVLLVGIGADEQLGGYGRHKTAY 621
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: F0W7Q3_9STRA (Asparagine synthetase domaincontaining protein putat n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7Q3_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.050e-30 Identity = 95/243 (39.09%), Postives = 115/243 (47.33%), Query Frame = 1
Query: 1336 VGSPARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKG-WLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQ 2061
+ S RV +LFSGGLDSVVLAAL VP EPI+L+NVCFD P G SPDRLA+ +A ELRTLFP WRL+ +N YE+V+ + R+M+PCDT MDFNI AA YF +RG G W + +P +P+ RSE TR L D + V CPV GC R K GC F VC CC + Q
Sbjct: 297 ISSKVRVAILFSGGLDSVVLAALTQYH---------VPDFEPIELLNVCFD-PIGFQSPDRLAARIATQELRTLFPTREWRLIEINILYEEVLDHQQRIHRLMKPCDTHMDFNIGAALYFLARGIGQWNALNEVEPALGAHSPTSTRSES--------------------------------------------TRSVCLFPDYKSDSVK------CPVTGCGRKWKTGCLFTVCRVCCFRIQ 479
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A0A7S4D4W9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4W9_HETAK) HSP 1 Score: 135 bits (339), Expect = 4.660e-30 Identity = 89/242 (36.78%), Postives = 120/242 (49.59%), Query Frame = 1
Query: 1354 VGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLE--RLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLD 2073
VGVLFSGGLD VLAAL A +P GEP+DLINVCF++ SPDR AS+ ++ EL+++FP WRL+CV+ Y + + + +MQPC+T MDFNI AAF+FASR +G++Y Q E + + +LE P + H+ E+ GK K K E C V C++ +K GCAF C CCLK Q +D
Sbjct: 2 VGVLFSGGLDCTVLAALADGA---------LPAGEPVDLINVCFEA---GASPDRAASITSLKELQSIFPSRPWRLICVDVPYSEAIEHQDHIKGLMQPCNTHMDFNIGAAFWFASRAQGYIYSVSSQ------------EEAEKHLQIRDLKNLE--GRPLLRFGENNEHL--PENHGKR-------------------KHTKTFEAGNSCSVERCKKKIKQGCAFQTCRSCCLKLQQQID 196
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A0A662WWX7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWX7_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.130e-29 Identity = 136/451 (30.16%), Postives = 182/451 (40.35%), Query Frame = 1
Query: 1342 SPARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQPPQLPLTPSDPRSEGPTLVPLSTQLDLETPTGPASDTERTDIHIHGVESQGKLNGDKKETRKSVLESDRRGGKVNKNLERLCPVGGCRRLLKPGCAFDVCSRCCLKAQGLLDAAVSAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTDESTSERRQRLYKARALAEALRALEVHLATHFVELSTPFQAGELASLLERDIESSRRRVRAERSQHLCLLALESRPARGGNAAAIAERLSTKWCPAHKKLRSRGAQGDDCSHATSAWESAEAGAEQKPRGRSAAQATYTSKARVLLVGIGADEFMGGYSRHRNVYRRG 2694
S ARV V FSGGLDSVVLAAL +P EP+DL+ VCFD +G SPDR A+ +A EL LFP WRLV ++ S ++ RE +V +M PC+T MDFNI AAF+F SRG+G + P+P Q + E TL L+ L TP TDI + LN + E+ K+ LCPV C R K GC DVC CC K Q +D+ +S D+ R+ + +A+ L +++ E H+ +EL L S + D + RV + Q +S++ CP P RS Y ++ARV+ VGIGADE + GY RHR G
Sbjct: 287 SKARVAVFFSGGLDSVVLAALAH---------FHLPDAEPVDLLTVCFDESSGFASPDRQAAELACTELCELFPTREWRLVRIDVSRLELQREQREVQALMSPCETHMDFNIGAAFWFLSRGQGTI----PKPSQAGKS-----GETTTLKQLNAFL---TPGHADLRALETDISM--------LN---------LFEA--------KDESVLCPVYRCGRKRKRGCVLDVCRSCCFKIQRTIDSLLS-----------------------------HQLGAQDQDADPRQVQGLRAKLLTMGVQS-ETHI-DRLLEL--------LKSTVSDDFSTLTCRVHRSKQQP----------------------MSSESCP------------------------------PPPSPRSVESTVYQTQARVVFVGIGADEQLAGYGRHRTALVNG 600
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: UPI001600BBBD (asparagine synthetase domain-containing protein 1-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001600BBBD) HSP 1 Score: 135 bits (340), Expect = 4.900e-29 Identity = 160/618 (25.89%), Postives = 252/618 (40.78%), Query Frame = 1
Query: 22 LAAVLHLRGKHLHPQPAEDSNGNVLLWNGEVFDGLEVGPSESDTGKVLQALSGTRSHEEVVETLARISGPFSFVFWCLSRRELYYGRDAVGRRSLVARRPRTPQEPLIVMSCLPRRPVLAGGCSSNPAAMSAPAGAHGIAETGSPQPSIGVPFCGIDDGAKGCWEEVSASGVYSLSLGLSLPGGRSPGGEWNAPSLKLHAWPASCVIGEGDGGSTTDSSTG-----DGHPAGVSDGINPGERGDGASQIPSLSPXXXXXXXXXXXXXTSLTTSGSRGCTTVGLVDEGQSIQPVCRDCMGPPTVEGNRQGPEDWWRGERGGKTPPREASAGCNEDEILGKSSRGMAERGRMSPAAVGLLGRLRDSIDRRVRSVPRP----EACSWVEGMHISGAGDTCLAAESNVVPGRSQRGEGTEARDATLAGASGPDGGGRIQSDGQWC------IAEKC---------NVGSPARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCF-----------------------DSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSD-VWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSP 1731
L +VLH+RG+ + QP++D GN+LLWNGE+FDG++V ++DT + Q L+ + E +++ I GP++F++W ++L++GRD GRRSL+ R P + + S + R P+P G W+E+ A G++ +S+ + G +A S+K + W + D G+T SS D H D I + G + +P + L++ R GL + S + R GP D GK + A+ D+I+ + ++ AV L+ L +++ RRV +VPR EA S V+ H+ + + RG+G +L GAS I + C +A K N RV +LFSGG+DS+V+AAL DR VP EPIDL+NV F D P PDR+ + + EL + P W V VN + +++ + S V ++ P T +D +I A +FA+RG+G L P
Sbjct: 59 LGSVLHMRGE-ITQQPSQDHCGNILLWNGEIFDGIKVEEDQNDTCVLQQLLAASHGEEGLLQLFQSIKGPWAFIYWQACSKQLWFGRDYFGRRSLLWRLPDGETDVFALSSVIAR-----------------------------PEPQDGQ------------WQEIPAKGIFCISVESWVAG--------SALSIKWYPW-------QHDNGTTYPSSPELFADEDCHLHTSLD-IKKMDSGPSSPVLP-----FNRKLPDHEHQLSDLSSEIDRTSAKNGLQLQASSSREA-------------RAGP-DMCASNVVGKNTEKLAAMPDILDQIVDE---------KLKTLAVQLIAVLGEAVKRRVFNVPRGSESYEAKSTVQKQHVEQLDSLEILQDRAEQLSDDARGDGL-----SLGGASAAPSATAIPAVKIGCPELFSEVAMKTAAMQGSTEKNCSEKCRVAILFSGGVDSMVIAALA-------DRF--VPSDEPIDLLNVAFQQKGKQHQPGKKKGSKNQREVVYDDP--FQVPDRITGLQGLEELVRINPSRHWNFVEVNVTLDELREKRSQHVSHLLYPLQTVLDDSIGCAIWFAARGRGRLANCP 574
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Match: A8I728_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I728_CHLRE) HSP 1 Score: 135 bits (339), Expect = 5.060e-29 Identity = 166/603 (27.53%), Postives = 227/603 (37.65%), Query Frame = 1
Query: 10 VLHLLAAVLHLRGKHLHPQPAEDSNGNVLLWNGEVFDGLEVGPSESDTGKVLQALSGTRSHEEVVETLARISGPFSFVFWCLSRRELYYGRDAVGRRSLVARRPRTPQEPLIVMSCLPRRPVLAGGCSSNPAAMSAPAGAHGIAETGSPQPSIGVPFC--------------GIDDG-----AKGCWEEVSASGVYSLSLGLSLPGGRSPGGEWNAPSLKLHAWPASCVIGEGDGGSTTDSSTGDGHPAGVSDGINPGERGDGASQIPSLSPXXXXXXXXXXXXXTSLTTSGSRGCTTVGLVDEGQSIQPVCRDCMGPPTVEGNRQGPEDWWRGERGGKTPPREASAGCNEDEILGKSSRGMAERGRMSPAAVGLLGRLRDSIDRRVRSVPRPEACSWVEGMHISGAGDTCLAAESNVVPGRSQRGEGTEARDATLAGASGPDGGGR------IQSDGQWCIAEKCNVG-SPARVGVLFSGGLDSVVLAALLAEAGGREDRGAPVPRGEPIDLINVCFDSPTGHTSPDRLASMVAVGELRTLFPGHAWRLVCVNASYEDVVREGSDVWRVMQPCDTTMDFNIAAAFYFASRGKGWLYQSPPQP 1740
VL L A +L LRG+H P+ G+VL +NGE+F GL+V P +D ++L+ L+ + + V E L I GP++ +FW +R+ L++GRD +GRRSL+ P EP ++MS G S A + AHG G +DG + G W E+ G+YS+ LGLS+ GG GG +A + G+S P++S G+ + V GNR W+ C + + PAA ACS E + DT L AE+ V G + EA T A G G I S NV P V +LFSGG+DSV+LAAL A +P PIDL NVCFD G SPDR A+ A+ EL PG WRL+ V+A+ EDV R + +++P T MD NI AA + A+ G+G L PP P
Sbjct: 53 VLRLTATLLQLRGRHPCVSPSISEQGHVLCFNGEIFGGLDVPPGTNDGARLLRELAA--AGDAVPEVLGPIRGPWALLFWDPNRQRLWFGRDVLGRRSLLVHWP-DAAEPRLLMSSASEL----GTASVGLGAANGSQRAHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQEDGDEPSGSDGFWTELPP-GLYSIDLGLSMGGG-GVGGHGSAEA--------------------------------------------GSSGGPAVS---------------------------------GREEETV------NSAATGNR------WQ---------------CIHTKFI-------------LPAA----------------------ACSSAESAYCGAGADTDLGAEAAVAGGA----DALEAAAVTAGEAHGAQGAAAAAHRPDIASHVDQLAVGLLNVMLPPPPVMILFSGGVDSVLLAALAHRA---------LPLDFPIDLCNVCFD---GGKSPDRGAARCALRELAQACPGRPWRLLEVDATLEDVDRHKMRILSLLRPAHTVMDLNIGAALWLAASGQGNLRLPPPPP 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17744.4664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17744.4664.1 >prot_H-elongata_contig17744.4664.1 ID=prot_H-elongata_contig17744.4664.1|Name=mRNA_H-elongata_contig17744.4664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=898bp TGEVLHLLAAVLHLRGKHLHPQPAEDSNGNVLLWNGEVFDGLEVGPSESDback to top mRNA from alignment at H-elongata_contig17744:2009..7200+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17744.4664.1 ID=mRNA_H-elongata_contig17744.4664.1|Name=mRNA_H-elongata_contig17744.4664.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5192bp|location=Sequence derived from alignment at H-elongata_contig17744:2009..7200+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17744:2009..7200+ >mRNA_H-elongata_contig17744.4664.1 ID=mRNA_H-elongata_contig17744.4664.1|Name=mRNA_H-elongata_contig17744.4664.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5388bp|location=Sequence derived from alignment at H-elongata_contig17744:2009..7200+ (Himanthalia elongata Himel1 dioecious)back to top |