mRNA_H-elongata_contig177263.4654.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A8J2WTR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTR4_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.470e-12 Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 28 RDRLQVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
+DR PCYNP G+Y+VK+F G WR+V+IDD +P++A + + S E+WPF+L+K
Sbjct: 226 QDRSGRPCYNPGGKYVVKVFFCGSWRRVQIDDRVPINARGQATIVFSRERRELWPFILAK 285
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A397ER62_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ER62_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.890e-12 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 40 QVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
++P NP G+YLVKLF G+WRK+E+DD +P+D V+ +S P EIWP LL+K
Sbjct: 149 RIPTVNPGGKYLVKLFVMGKWRKIEVDDRMPLDDQGKVVVLSSSQPSEIWPTLLAK 204
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: W4GWQ1_9STRA (Calpain catalytic domain-containing protein n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWQ1_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.750e-12 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 40 QVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
++P NP G+YLVKLF G+WRKVE+DD +P+D V+ +S P EIWP LL+K
Sbjct: 345 RIPTVNPGGKYLVKLFVMGKWRKVEVDDRMPLDDQGKVVVLSSSQPSEIWPTLLAK 400
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: D8LMH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH7_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 3.420e-12 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1
Query: 40 QVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDAT 144
+VPCYNP GRYL+KLFAAGRWR+VE+DD IP+DAT
Sbjct: 341 EVPCYNPCGRYLIKLFAAGRWRRVEVDDSIPLDAT 375
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A482RSF0_9ARCH (Calpain catalytic domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSF0_9ARCH) HSP 1 Score: 69.3 bits (168), Expect = 3.640e-12 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 40 QVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
Q P YNP+G+Y VKLF AG+WRKV +DD +PV++ +A S + +E+WP LLSK
Sbjct: 203 QKPVYNPAGKYAVKLFLAGKWRKVYVDDSLPVNSKGQLAVAHSVDTLELWPILLSK 258
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A1V9ZIS5_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIS5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 5.130e-12 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 16 PQPLRDRLQVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
PQ + ++P NP G+YLVKLF G+WR+VE+DD +P+D V+ +S P EIWP LL+K
Sbjct: 330 PQTVVGGRRLPVCNPGGKYLVKLFVLGKWRRVEVDDRLPLDKASRVVILSSTLPSEIWPSLLAK 393
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: T0QRC4_SAPDV (Calpain catalytic domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QRC4_SAPDV) HSP 1 Score: 68.9 bits (167), Expect = 5.130e-12 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 16 PQPLRDRLQVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
PQ + +VP NP G+YLVKL+ G+WR+VE+DD +P+D ++ +S P EIWP LL+K
Sbjct: 329 PQSIVGGKKVPVANPGGKYLVKLYVLGKWRRVEVDDRLPLDKNGKVIVLSSTLPTEIWPSLLAK 392
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: F4P4B4_BATDJ (Calpain catalytic domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P4B4_BATDJ) HSP 1 Score: 68.6 bits (166), Expect = 7.030e-12 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 43 VPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
+P YNPSG+Y+VKLF G WRK+ +DD IP+DA+ ++ +S EIWP L+ K
Sbjct: 347 IPMYNPSGKYIVKLFWLGAWRKITVDDRIPIDASGKPLMISSPATTEIWPLLICK 401
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A5D6XS70_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS70_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 9.590e-12 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 28 RDRLQVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
+D L P YN G+Y VKLF GRWR+V++DD +PVDA V AS EIWP LL+K
Sbjct: 378 QDALGTPVYNAGGKYAVKLFVLGRWRRVDVDDRLPVDADDNVVCLASSMRSEIWPSLLAK 437
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Match: A0A7S2C2Q4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2Q4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.370e-11 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 46 PCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLSVLAASENPVEIWPFLLSK 207
P YNPSG+Y+VKL+ AG WR + IDD +PVDA V+A S EIWP LL+K
Sbjct: 28 PSYNPSGKYVVKLWVAGAWRAITIDDRMPVDANGYLVIANSTTSREIWPSLLAK 81 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177263.4654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig177263.4654.1 >prot_H-elongata_contig177263.4654.1 ID=prot_H-elongata_contig177263.4654.1|Name=mRNA_H-elongata_contig177263.4654.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp MLPSTPQPLRDRLQVPCYNPSGRYLVKLFAAGRWRKVEIDDDIPVDATRLback to top mRNA from alignment at H-elongata_contig177263:208..889+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig177263.4654.1 ID=mRNA_H-elongata_contig177263.4654.1|Name=mRNA_H-elongata_contig177263.4654.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=682bp|location=Sequence derived from alignment at H-elongata_contig177263:208..889+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig177263:208..889+ >mRNA_H-elongata_contig177263.4654.1 ID=mRNA_H-elongata_contig177263.4654.1|Name=mRNA_H-elongata_contig177263.4654.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=414bp|location=Sequence derived from alignment at H-elongata_contig177263:208..889+ (Himanthalia elongata Himel1 dioecious)back to top |