mRNA_H-elongata_contig1772.4649.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1772.4649.1
Unique NamemRNA_H-elongata_contig1772.4649.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI)

HSP 1 Score: 812 bits (2098), Expect = 6.200e-270
Identity = 460/726 (63.36%), Postives = 528/726 (72.73%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMP---AATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMR------------------RKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAGVMQRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGR-GSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLRQGLILFSILPYVRTPSRYTSVENHIEMSVAALRGTP 2118
            RRF AN+IYTNVADVLVSINPY  IPGLYDIPMP   AA    P L ++                V+GPS+G RVAER+AALMR F E       +  +    G+R++  D     K++L ALKS+LGKPHVYGVADRAF+YM+ET+GREV+GR+R+RNQSILITGESG+GKTEASKHVMRFL TASRALAG+      + G         G  +                  R   +  TA  A +HMED+LL+SNTVLEAFGNAKTVRNDNSSRFGKYIKL YD D  L+GA+TEHFLLEKSRLVHL++ ERSYHILYQ       V K+L    K    L  GA+ F LL QGN L AS+ VDD EEF AVDKALSSL+F+  +K D+WRL+AAILHSGEVS FED+ G + CR+ + G     R  ++S   LAALWGV++   E GVM+RTVT G +SASV LNAAQAK+NLLALLKHMYRQLFAWINWKIN VF+ P    G  G+G   TFIGILDIFGFEIMATNSFEQLCIN+ANEVLQRQFNHHIFVLEQ    EEYG EGLDV SIPFRDNQ II+LIAKRPAGLMPILEDQALTGR+AAS+ +SFTDKNL++LFHQQHHR+APHPCYRKPRFDGPEFV+MHYAG+VTY ATGFLEKNNDTLQEDLR LLLSS IPFLRQ LIL     + +     T+ E+H   +      TP
Sbjct:  151 RRFRANSIYTNVADVLVSINPYTDIPGLYDIPMPVVKAAPGVLPGLNVS----------------VRGPSAGGRVAERSAALMREFKEGQD---DRHRNKRGNGKRAKEPDA----KSKLTALKSMLGKPHVYGVADRAFKYMSETKGREVDGRVRRRNQSILITGESGAGKTEASKHVMRFLITASRALAGTAPAPPRAQGYAVAGTPVAGTPKAYXXXXXXTGGRSAPGFWRSPAVATTAAGAAKHMEDVLLRSNTVLEAFGNAKTVRNDNSSRFGKYIKLQYDHDFRLVGARTEHFLLEKSRLVHLEESERSYHILYQ-------VAKALPMADKEAFHLQGGAECFSLLTQGNRLVASDDVDDHEEFHAVDKALSSLDFTANDKTDMWRLLAAILHSGEVS-FEDVSGKEQCRISKVG-----RCTSISPANLAALWGVDEEVFEEGVMRRTVTAGGTSASVALNAAQAKENLLALLKHMYRQLFAWINWKINVVFDAPKKAVGEAGAGAKRTFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHIFVLEQ----EEYGEEGLDVGSIPFRDNQKIIDLIAKRPAGLMPILEDQALTGRKAASITSSFTDKNLLDLFHQQHHRKAPHPCYRKPRFDGPEFVIMHYAGNVTYTATGFLEKNNDTLQEDLRGLLLSSRIPFLRQ-LILGENGVFNKAQGTSTADEDHANDNDPITSNTP 835          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 1.190e-155
Identity = 323/700 (46.14%), Postives = 407/700 (58.14%), Query Frame = 1
Query:    1 MCRRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTK---ARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAG-------VMQRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFN--VPGGIQGRGSGFG------------------HTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLR 2010
            + RRF  + IYTN+ADVLVS+NPYK IP LY+IP+         L + D++                                 + E+ G                E + +   +    AR  A+K  L KPHV+ VADRAF+YM E      +G+ R  NQS++ITGESG+GKTEASK+VMR+L TA++ LAG     LSS G  D        M ++IE V             L++SNTVLEAFGNAKT+RNDNSSRFGKYIKL YD    L+GA+TEHFLLEKSRLV +D  ER YHI YQ          +L + +   L L    K F+ +  G C    + VDD  EF+A   AL++L F+  E   +WRL+AAILH G +  F DL        V  G V  + +  + +GEL +L  +E++   +G       V +  VT   S   + LN++QAKDNL  L+KH+Y  LFAW+ +KIN      V  G +      G                   +FIGILDIFGFEIMATNSFEQLCIN+ANEVLQRQFNHH+FVLEQ    +EY AEGLDV SIPFRDNQ II+LIAK+P GLMPILEDQ LTGR+A +L  + TDK L++L+HQ HHR APHP Y KPRF+  +FV+ H+AG V Y   GFLEKNND+LQ DLR LL  S+ P +R
Sbjct:  114 LLRRFRQDKIYTNMADVLVSVNPYKKIPLLYEIPL---------LQMQDDSEDE------------------------------YEESDG----------------EDDTMVPSSSPLDARPEAMKRRLSKPHVHSVADRAFRYMTEPGQEYEHGKARCLNQSVIITGESGAGKTEASKYVMRYLITAAQVLAG-----LSSEGPVDA-------MAKRIEAV-------------LMESNTVLEAFGNAKTLRNDNSSRFGKYIKLQYDATFRLVGARTEHFLLEKSRLVRVDQAERGYHIFYQM------CSGALPQDVTAALHLADPTK-FRCIAMGGCTALGDEVDDASEFRASQGALATLGFTAAETAAVWRLLAAILHMGNID-FTDL-------QVGAGAVGGEDQTAMVSGELISLGALEELLGLSGGALAKRVVRRAMVTARGSMHEIPLNSSQAKDNLDGLVKHVYGALFAWVVFKINRCHREQVIEGTKEAAEEDGDSKAXXXXXXRAVSASAARSFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHVFVLEQ----QEYTAEGLDVTSIPFRDNQGIIDLIAKKPLGLMPILEDQGLTGRKAHALN-NLTDKKLLDLYHQAHHRNAPHPNYEKPRFENDQFVLRHFAGSVVYDIAGFLEKNNDSLQGDLRILLSESTDPLIR 713          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: D7G6I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 7.690e-149
Identity = 329/736 (44.70%), Postives = 426/736 (57.88%), Query Frame = 1
Query:    1 MCRRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSG-RGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQ---ARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDRE------EFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDL--PGTDHCRM-VQTGDVDRKRKLTLSAGE------LAALWGVEKVKLEAGVMQRTVTV-GDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVF--NVPGGIQGRGS----GFGH------TFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLRQGLILFSILPYVRTPSRYTSVENHIEMSVAALRG 2112
            + RRF  + IYT+VADVL+SINPYK+IP LY++P+           + DE                                  F E+ G R AP+       GR   ++D      AR  AL   LG+PHV+ VADRAF+YM        +G+ R  NQSI+I+GESG+GKTEASKHVMR+L TAS         +L++G  +D A           E      +  + +E  LL+S+T+LEAFGNAKT+RNDNSSRFGKYIKL+YD D  L+GA T+HFLLEKSRLV +D GER YHI YQ     DE K    SL           A A+ F +++QG+C+  S+ VDDR+      EF   + A+ +L F   +K  ++R++AA+LH G V RFE+   P     +  +   D         S+GE       AAL G+++  L   VM R +   G S   + L A ++ DNL AL KH Y +LF WI   IN     +V G    +G+    G G       +FIGILDIFGFEIMATNSFEQLCIN+ANEVLQRQFNHHIFVLEQ    EEY AEGLDVA+IPF++NQ II+LI K+P GLM ILEDQ LTGR+A ++     D+++++L+HQ+HHRR PHP Y KPR     F + H+AG+VTY   GFLEKNND+LQ+DLRALLL S   F+R+   L  I P V    ++ + +N       A RG
Sbjct:  141 LLRRFRKDAIYTSVADVLISINPYKNIPLLYEVPLHQ---------MQDEPEDE------------------------------FEESDGEREAPREGR----GRNGRAKD------ARPKALSDKLGQPHVFSVADRAFRYMKSPGAEYTHGKRRGMNQSIIISGESGAGKTEASKHVMRYLITAS---------QLANGVSQDAAGH---------ESSDGVEAMAKRIEATLLRSSTLLEAFGNAKTLRNDNSSRFGKYIKLLYDRDSRLMGASTDHFLLEKSRLVKVDSGERGYHIFYQMLAGLDEAKAEALSL-----------APAEEFHMISQGDCVAISDEVDDRQARHVNTEFVQTEDAMETLGFEAEDKAAVFRVLAALLHLGNV-RFEETESPAQGGAKAKICRADSSLSSSNDSSSGEGAGLAKAAALLGLDEDILTRKVMWRAIMAPGKSLHEIALTARESSDNLSALSKHTYGKLFTWIVAFINRCHQQHVRGVTLDKGAAELAGIGDDEDKRSSFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHIFVLEQ----EEYKAEGLDVAAIPFKNNQDIIDLICKKPLGLMIILEDQVLTGRKAHAMN-KLDDRSVLDLYHQEHHRRNPHPNYEKPRMQCDLFTLKHFAGNVTYDVAGFLEKNNDSLQDDLRALLLDSEDDFVRE---LADITPTVPDGQQHLTPQNSPARVGVAFRG 789          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 2.020e-121
Identity = 288/689 (41.80%), Postives = 379/689 (55.01%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGR-IRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAGVMQRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHT-----FIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLRQGLILFSILPYVRTP 2055
            RRF  + IYT  +DVL+SINPYK IP LYD+               D AT+          G+  P+S                        + S+H       + + +A+   A  AAL     +PHVY VA RAF++M E     + G+ +  +NQSI+I+GESG+GKTEASK+VMR+L T + AL   +S    + G    A    G+M                +E  LL+SNTVLEAFGNAKT+RNDNSSRFGKYIKL YD    LIGA T+HFLLEKSRLVH+D  ER+YHI Y+       + K L+      L+L    + + +L QG C    E VDD EEF+ V +AL +L  S+ E   +WRL+A +LH G +    D    D   +VQ           +S  E+A L GV   KL  GV +RT     SS ++ LN  Q+++N+ A++K++Y + F WI  KIN+  +         S    +     FIGILDIFGFEIM  NSFEQLCINYANEVLQ+QFN H+FVLEQ    +EY AE LD + I FRDNQ +I+LIAK+P GL+ +LE+Q L GR+A        +  L+  +H  H  +    CY KPRF G EF++ H+AG VTY    F+EKNND+L +DL  L   S   F +    LF+  P   TP
Sbjct:  113 RRFRNDKIYTTCSDVLISINPYKKIPLLYDL---------------DTATA----------GLLDPTSS---------------------ISRESNH-------DGDSLAQNEGA--AALPPSERRPHVYSVAARAFRFMTEPNEALLLGKNVALKNQSIIISGESGAGKTEASKYVMRYLITVANALQRQKSSRPKALGAEKPAGD--GDM----------------IEKCLLRSNTVLEAFGNAKTLRNDNSSRFGKYIKLQYDAKRNLIGAWTDHFLLEKSRLVHVDPDERNYHIFYE-------MLKGLAPATLAALKLTDRPEDYTILAQGGCCSL-EDVDDAEEFRQVAEALVTLGVSEEECASLWRLLAVLLHLGNLEFGGDNADDD---LVQISSPH------VSLSEIAELLGVTPDKLVQGVTRRTTHTRGSSLTIPLNPEQSRNNVQAVIKYVYGEAFHWILRKINSCHSSMASDSSTRSPAASSEGVASFIGILDIFGFEIMTRNSFEQLCINYANEVLQQQFNMHVFVLEQ----QEYVAEELDWSVISFRDNQPVIDLIAKKPLGLLIMLEEQGLLGRKA-------NNDALLTSYHNTHLNKVE--CYAKPRFQGDEFIIKHFAGSVTYSTASFIEKNNDSLHDDLLDLWRLSENAFFQN---LFTDKPVPGTP 695          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 2.400e-118
Identity = 248/556 (44.60%), Postives = 333/556 (59.89%), Query Frame = 1
Query:  370 SILGKPHVYGVADRAFQYMAETQGREVNGRI---RKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFE-DLPGTDHCRMVQT---GDVDRKRKLTLSAGELAALWGVEKVKLEAGVMQRTVTVGDSS-ASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLRQ 2013
            S+L  PHVY VAD+A ++M       ++G +   RKR+QSI+ITGESG+GKTEA+K+VM++L  AS+A+  +E+      G                            ME  LL+S  VLEAFGNAKTVRNDNSSRFGKYIKL Y  D  L GA+T  FLLEKSRLVH +  ER+YH+ YQ     K VP  L + + V     A A  F++L +G     S+ VDD EEF  +  ALS+L  +  E+E +WRL+AA+LH G +  +E D  G D          G   R     L+  ++A++ G+   +L + + ++    G  S   + LN  QA+DN   L+KH+Y Q+F W+  KIN      GG     +     F+GILDIFGFEIM  NSFEQLCIN+ANEVLQ+QFN H+FVLEQ    EEY  EGLD   I F+DNQ +I+L++K+P GL+  LE+Q L GR+A        +K L++L+H  H  ++   CY KPRFD  EF+V+H+AG+V Y   GFLEKNND+L ++L  LL ++  PFLR+
Sbjct:  296 SVLDHPHVYAVADKAHRFMTNPTAGRLSGGVAGARKRDQSIIITGESGAGKTEAAKYVMKYLIAASKAVT-AEAENGDPAGXXXXXXXXXXXXXXXXXXXXXXXDTASDMERRLLESTVVLEAFGNAKTVRNDNSSRFGKYIKLQYGADWKLGGARTLPFLLEKSRLVHQEHNERNYHVFYQL---CKGVPDELRQSLSV-----ANAPEFEMLRKGGVFMQSDEVDDAEEFHCLASALSTLGVTSEEQEGLWRLLAALLHLGNIIFWETDGDGGDXXXXXXXXXGGSGLRLESPLLALEDVASMAGLPADRLVSSMRKKVAMTGRGSFLEIPLNPTQARDNRNGLVKHVYGQVFNWLVGKINEAHRSGGGADMADT---VAFVGILDIFGFEIMVRNSFEQLCINFANEVLQQQFNSHVFVLEQ----EEYEKEGLDWTMIEFQDNQPVIDLVSKKPRGLLIQLEEQGLLGRRA-------NNKALLQLYHNTHLTKSA--CYSKPRFDSTEFIVLHFAGEVVYDIEGFLEKNNDSLHDNLLDLLDTTVDPFLRR 826          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: A0A7S2S1B0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1B0_9STRA)

HSP 1 Score: 352 bits (903), Expect = 7.960e-107
Identity = 261/717 (36.40%), Postives = 358/717 (49.93%), Query Frame = 1
Query:   10 RFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTAS---------------RALAGSES----------------------------------------VELSSGGVRDTA-RGTVGEMRRKIEIV-------PTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVS-RFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAGV----MQRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDT 1956
            RF  + IYTNV  VL+S+NPYK IP LY +                    TS   + A       ++G+ VA   A   +G                      ++ D   G              PHVY VA+ A + MA +    V G I+  NQS++I+GESG+GKTEASKHVMRFL   S               R ++G  S                                        +  + G +R +A   T    +R+  ++       P  TS    +E  L++SN +LEAFGNAKTVRNDNSSRFGKYIKL Y+E   ++ A T HFLLEKSRLV L + ER+YH+ YQ       +P +       EL L    K F+L+ QG C+  S+ VDD  +F  +D++L     +  E++ IW L+AA+LH G V     ++ G +H ++V   +V            +A L G+E+ +L+       M  TV    ++  V LN  QA +++ AL+K +Y +LF+W+  KIN          G       +FIGILDIFGFEIM  NSFEQ+CIN+ANEVLQ+QFN HIFVLEQ    E Y +EGLD + I FRDNQ++I+LI K+P GL+ I E+         S + +  +  L++ +H  H +      Y KPRF  P FVV H+AGDVTY   GF+EKN D+
Sbjct:   84 RFKKDKIYTNVGGVLISVNPYKFIPNLYTL-------------------KTSGGQAAA-------ATGAAVASPTAVASQG----------------------DASDAVVGYG------------PHVYSVAEGALEAMAPS----VTGSIK--NQSVVISGESGAGKTEASKHVMRFLINQSMKKDSHAAPNLTQLVREVSGGNSDRGSLVIHRSSLGPLVPCSETLTPPRPRTSRLTTLCPRVFLSAAGGDLRGSAVSATSSANKRRGSLIAAGATVDPVGTSTSTDIESKLMQSNVILEAFGNAKTVRNDNSSRFGKYIKLQYNEQGRMMQANTMHFLLEKSRLVSLANKERNYHVFYQLCKGGMELPYA------DELYLQDPTK-FRLIAQGKCVTISDEVDDAADFALLDQSLQECGLTVMEEDAIWELLAALLHLGNVGIETTNIKGAEHSKVVSASEVP--------VALIAELLGLEEDELQKACTYHEMHNTVHGAATTIHVPLNKEQATNSIEALIKFIYSELFSWLVAKINQA-------HGSSRKTFPSFIGILDIFGFEIMKHNSFEQICINFANEVLQQQFNQHIFVLEQ----EIYASEGLDWSQISFRDNQALIDLIGKKPKGLLIICEEHV-----KLSFKRAPDNSALLQTYHNTHSKNE---FYAKPRFKDPAFVVKHFAGDVTYQVAGFIEKNRDS 700          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: A0A067C8A1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8A1_SAPPC)

HSP 1 Score: 351 bits (901), Expect = 2.370e-100
Identity = 240/676 (35.50%), Postives = 350/676 (51.78%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMVQTGDVDRKRKLT-----LSAGELAALWGVEKVKLEAGVM-QRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAV---FNVPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFL 2007
            RR+ A+ IYT   D+L+S+NPYK IP LYD+                                                  GF E                        A  T+A        + KPH++ +A++A++ M   +  E N       QSI+++GESG+GKTEASKH+M++L  AS+         L+ GG    A                  S  E +E+ +L SN VLE+FGNAKT RNDNSSRFGKYI+++Y+ D  + G   +HFLLEK+R+V  +  ER+YH+ YQ           ++ +  +EL+    A  +  L  GNCL+  +GVDD  +F+ +  +++ L F+   +++I++++A IL  G           + C+   +        L+     +   ++A L+ V   +LE  +  Q TVT   S   +KL+  QA+    AL K++Y ++F +I  ++NA+      PG          H FIGILDIFGFEIM TNSFEQLCIN+ANE+LQ+QFN H+FVLEQ    E Y +EG+ V+ I F+DNQ  ++LI K PAG+ P+L++Q +  R+        TD+ L+ ++HQ H  + PH  Y KPRF+  +FV+ HYAGDVTY   GF+ KN D L EDL  LL +S +P L
Sbjct:  126 RRYLADAIYTFTTDILISVNPYKSIPLLYDV-------------------------------------------------TGFME------------------------ATKTQADCE-----IKKPHLFTIAEKAYRDMRNARCGETN------PQSIVVSGESGAGKTEASKHIMKYLAVASK---------LAEGGKTSKAD----------------ASLHEKIEECVLLSNHVLESFGNAKTSRNDNSSRFGKYIQILYNGDGRMNGVAIKHFLLEKTRIVAPETNERNYHVFYQMLAGL-----DVNERAALELQ---DAAHYDFLTYGNCLEI-DGVDDASDFRVLRASMTQLGFTPSTQQEIFQVLAGILKLGNARFTLRSDDREACQFATSASYGLSSLLSCCCIDVPVAKIAGLFRVAADELEDKMTTQTTVTGRGSILRIKLSCDQAEVAKQALCKYLYGEIFNYIISRLNAMCGEHTKPGK---------HPFIGILDIFGFEIMPTNSFEQLCINFANEMLQQQFNRHVFVLEQ----ERYASEGISVSVIEFKDNQECLDLIQKSPAGIFPLLDEQIMLKRKT-------TDRQLLNIYHQTHLDKHPH--YAKPRFESDDFVIKHYAGDVTYSVHGFVSKNTDNLHEDLVELLRTSQLPVL 661          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: A0A024UE78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE78_9STRA)

HSP 1 Score: 350 bits (897), Expect = 7.410e-100
Identity = 237/667 (35.53%), Postives = 345/667 (51.72%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEH--MEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAGVM-QRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSI 1998
            RR+  ++IYT   D+L+S+NPYK IP LYDI                                                  GF  +S                              A L   L  PH++ +A++A++ M     R +        QSI+++GESG+GKTEASKH+M++L  ASR                D  +G V          P A     H  +E+ +L SN VLE+FGNAKT RNDNSSRFGKYI+++YD +  + G   +HFLLEK+R+V  +  ER+YH+ YQ       +   +  + + +L L   A+ ++ L  GNC++  +GVDD  +F+ +  +++ L F+   + +I++++AAIL  G  S        D C+      V+           +A+L GV+  +LE  +  Q TVT   S   +KL   QA+    A  K++Y ++F ++  ++N+  +              +FIGILDIFGFE+M  NSFEQLCIN+ANEVLQ+QFN HIFVLEQ    E Y AEG+ V+ I F+DNQ  ++LI K P+G+MP+L++Q +  R+        TD+ L+ ++HQ H  + PH  Y KPRF+  +FV+ HYAGDV YC  GF+ KNND L EDL  LL +SS+
Sbjct:  137 RRYVNDSIYTFTTDILISVNPYKSIPMLYDI-------------------------------------------------AGFMASS-----------------------------KAKLDCELKTPHLFSIAEKAYRDM-----RAIKRDGATTAQSIVVSGESGAGKTEASKHIMKYLAVASRQA--------------DDTKGAVH---------PPAGHVTLHEKIEECVLLSNYVLESFGNAKTSRNDNSSRFGKYIQILYDREGRMCGVAIKHFLLEKTRIVLPETNERNYHVFYQ-------MLAGMEPREQTDLELTT-AEHYEYLTTGNCIEI-DGVDDAADFRVLRASMTKLGFTPATQTEIFQVLAAILKLGNASFTCQQNDRDACQFAPDVPVET----------IASLLGVKATELEEKMTTQTTVTGRGSILHMKLTCEQAQHAKHAFCKYIYGEVFNYLIGRMNSTASEAKA---------QSFIGILDIFGFEVMPANSFEQLCINFANEVLQQQFNKHIFVLEQ----ERYAAEGISVSVIEFQDNQECLDLIQKPPSGIMPLLDEQIMLKRKT-------TDRQLLSIYHQTHLEKHPH--YAKPRFESDDFVIKHYAGDVVYCINGFIGKNNDNLHEDLMELLRASSL 656          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: W4GRK0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRK0_9STRA)

HSP 1 Score: 347 bits (889), Expect = 8.630e-99
Identity = 242/670 (36.12%), Postives = 345/670 (51.49%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLP-GTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAGVM-QRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDLRALLLSSSIPFLR 2010
            RR+  + IYT   D+L+SINPYK IP LYDI                                                  GF                               A  A L   L  PH++ +A++A++ M         G+ R   QSI+++GESG+GKTEASKH+M++L  ASR        + SS GV   A                  S  E +E+ +L SN VLE+FGNAKT RNDNSSRFGKYI+++YD+D  + G   +HFLLEK+R+V  +  ER+YH+ YQ       +   L      EL LVA  + ++ L  GNC+   +GVDD  +F  +  A+  L F+   + ++++++AAIL  G  S     P   + C+      +++          +A L GV+   LE  +  Q TVT   S   +KL   QA++   A  K +Y ++F ++  ++N+       ++ +      +FIGILDIFGFE+M  NSFEQLCIN+ANE+LQ+QFN HIFVLEQ    E Y AEG+ V+ I F+DNQ  ++LI K P+G+MP+L++Q +  R+        TD+ L+ ++HQ H  +  H  Y KPRF+  +FV+ HYAGDV YC  GF+ KNND L EDL  LL +SS+  +R
Sbjct:  136 RRYLIDAIYTFTTDILISINPYKSIPMLYDI-------------------------------------------------AGF-----------------------------MAASKAKLDCELKSPHLFSIAEKAYRDMRL-------GKQRDTAQSIVVSGESGAGKTEASKHIMKYLAVASR------QADESSKGVGHAA----------------TMSLHEKIEECVLLSNFVLESFGNAKTSRNDNSSRFGKYIQILYDQDGRMCGVSIKHFLLEKTRIVLPETNERNYHVFYQ-------MLAGLDALELAELELVAPDE-YEYLTSGNCIGI-DGVDDAADFCGLRTAMDKLGFTSATQRELFQVLAAILKLGNASFVPVHPQDREACQFAPEVPLEK----------IAQLLGVQAADLEQKMTTQTTVTGRGSILHMKLTCDQAQNAKHAFCKFIYGEMFNYLIGRMNSTS--AEFVKSK------SFIGILDIFGFEVMPVNSFEQLCINFANEMLQQQFNKHIFVLEQ----ERYAAEGIAVSVIEFQDNQECLDLIQKPPSGIMPLLDEQIMLKRKT-------TDRQLLTIYHQTHLEK--HANYAKPRFESDDFVIKHYAGDVMYCINGFIGKNNDNLHEDLMDLLRASSLQLVR 658          
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Match: A0A662Y8F0_9STRA (Myosin motor domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8F0_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.660e-98
Identity = 242/678 (35.69%), Postives = 329/678 (48.53%), Query Frame = 1
Query:    7 RRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDEATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHPHWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREVNGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSGGVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTVRNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHILYQARDETKRVPKSLSRKMKVE--LRLVAGAKAFKLLNQGNCLDASEGVDDREEFKAVDKALSSLEFSKGE-KEDIWRLIAAILHSGEV-----SRFEDLPGTDHCRMVQTGDVDRKRKLTLSAGELAALWGVEKVKLEAG-VMQRTVTVGDSSASVKLNAAQAKDNLLALLKHMYRQLFAWINWKINAVFN--------------VPGGIQGRGSGFGHTFIGILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAEGLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDKNLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNNDTLQEDL 1971
            +RF  + IYT  AD+L+SINPYK IP LYD+                                     G     + AA   G   NS   AP                                  PH++ +A++A+  M                QSI+I+GESG+GKTEASK++M++L TAS+  AG+ S   +S GV                         E +E+ ++ SN +LE+FGNAKT RNDNSSRFGKYI++ Y+ +  + G    HFLLEK+RLV  +  ER+YHI YQ       +    S  +  E  L L +    + LL +G+C++  +GVDD  EF+ + + L  L       +  ++ L+AAILH G V     S  E   G D      T  V  +    +    +A L GVE  +     V Q T+T   S   +KL   QAK+ + A  K++Y +LF  +  +INA                 V GG  G  S     FIGILDIFGFE+M  NS EQLCIN+ NE LQ+QFN H+FVLEQ    E Y  EG+ V+ + F+DNQ  ++LI K P GL+P+LE+Q L  R+        TDK L+ ++H  H  +  H  Y KPRF+  EF++ HYAGDVTY    F+ KN D L EDL
Sbjct:  138 QRFERDQIYTFTADILLSINPYKSIPLLYDVV------------------------------------GFMTRRQDAAAASGESPNSDSSAP----------------------------------PHLFSIAEKAYTGMKGVVPGSGT------PQSIVISGESGAGKTEASKYIMKYLATASKHAAGNSSKTAASTGVH------------------------EQIEECVVLSNLILESFGNAKTSRNDNSSRFGKYIQIHYNSEGRMAGVSIRHFLLEKTRLVRPEANERNYHIFYQMLAGLDSLTSEASDPVDAERPLLLQSDVWNYTLLTRGDCVEV-DGVDDATEFQQLRRCLEQLGMDNSSFQRPMFELLAAILHLGNVQFDSPSAQEAENGPDLGEDAPTRVVFPESDAGVDLEHVAMLLGVEAAEFATKMVTQTTITGRGSILEIKLTPEQAKNAMDAFCKYLYGELFHHVILRINACAKQQTASSQQSGPKPRVHGG-AGASSSTAPPFIGILDIFGFEVMQRNSLEQLCINFTNETLQQQFNKHVFVLEQ----ERYAREGIAVSPVEFQDNQRCLDLIQKPPLGLLPLLEEQMLLKRKT-------TDKQLLTIYHGNHLDK--HASYAKPRFECDEFIIRHYAGDVTYDIHDFIAKNTDNLHEDL 700          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1772.4649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6I1_ECTSI6.200e-27063.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZQ73_9STRA1.190e-15546.14P-loop containing nucleoside triphosphate hydrolas... [more]
D7G6I0_ECTSI7.690e-14944.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TRG2_9STRA2.020e-12141.80Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=... [more]
D7G3L5_ECTSI2.400e-11844.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S1B0_9STRA7.960e-10736.40Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A067C8A1_SAPPC2.370e-10035.50Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024UE78_9STRA7.410e-10035.53Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GRK0_9STRA8.630e-9936.12Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A662Y8F0_9STRA1.660e-9835.69Myosin motor domain-containing protein (Fragment) ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1772contigH-elongata_contig1772:6084..14073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score819.3
Seed ortholog evalue1.6e-234
Seed eggNOG ortholog2880.D7G6I1
Preferred namemyoG
KEGG koko:K10352,ko:K10357,ko:K10359,ko:K10361
KEGG Pathwayko04530,map04530
GOsGO:0006935,GO:0006996,GO:0007010,GO:0007015,GO:0007163,GO:0008104,GO:0008150,GO:0008154,GO:0009605,GO:0009987,GO:0016043,GO:0022607,GO:0030010,GO:0030029,GO:0030036,GO:0030041,GO:0030587,GO:0032502,GO:0033036,GO:0034613,GO:0034622,GO:0040011,GO:0042221,GO:0042330,GO:0043327,GO:0043933,GO:0044085,GO:0048856,GO:0050896,GO:0051179,GO:0051258,GO:0051641,GO:0051703,GO:0051704,GO:0065003,GO:0070727,GO:0071840,GO:0072657,GO:0090702,GO:0097435,GO:0099120
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759,KOG4229@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons15
Model size2388
Cds size2388
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930024.909305-CDS-H-elongata_contig1772:6083..62111622930024.909305-CDS-H-elongata_contig1772:6083..6211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6084..6211 -
1691679251.0944564-CDS-H-elongata_contig1772:6083..62111691679251.0944564-CDS-H-elongata_contig1772:6083..6211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6084..6211 -
1622930024.922432-CDS-H-elongata_contig1772:6401..66481622930024.922432-CDS-H-elongata_contig1772:6401..6648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6402..6648 -
1691679251.1036248-CDS-H-elongata_contig1772:6401..66481691679251.1036248-CDS-H-elongata_contig1772:6401..6648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6402..6648 -
1622930024.9498882-CDS-H-elongata_contig1772:6860..69621622930024.9498882-CDS-H-elongata_contig1772:6860..6962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6861..6962 -
1691679251.111161-CDS-H-elongata_contig1772:6860..69621691679251.111161-CDS-H-elongata_contig1772:6860..6962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 6861..6962 -
1622930024.96666-CDS-H-elongata_contig1772:7508..76701622930024.96666-CDS-H-elongata_contig1772:7508..7670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 7509..7670 -
1691679251.1189332-CDS-H-elongata_contig1772:7508..76701691679251.1189332-CDS-H-elongata_contig1772:7508..7670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 7509..7670 -
1622930024.9791498-CDS-H-elongata_contig1772:8238..83551622930024.9791498-CDS-H-elongata_contig1772:8238..8355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 8239..8355 -
1691679251.129242-CDS-H-elongata_contig1772:8238..83551691679251.129242-CDS-H-elongata_contig1772:8238..8355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 8239..8355 -
1622930024.9970036-CDS-H-elongata_contig1772:8751..88671622930024.9970036-CDS-H-elongata_contig1772:8751..8867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 8752..8867 -
1691679251.1367195-CDS-H-elongata_contig1772:8751..88671691679251.1367195-CDS-H-elongata_contig1772:8751..8867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 8752..8867 -
1622930025.018212-CDS-H-elongata_contig1772:9204..93611622930025.018212-CDS-H-elongata_contig1772:9204..9361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 9205..9361 -
1691679251.1440384-CDS-H-elongata_contig1772:9204..93611691679251.1440384-CDS-H-elongata_contig1772:9204..9361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 9205..9361 -
1622930025.0373225-CDS-H-elongata_contig1772:9616..98181622930025.0373225-CDS-H-elongata_contig1772:9616..9818Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 9617..9818 -
1691679251.1514568-CDS-H-elongata_contig1772:9616..98181691679251.1514568-CDS-H-elongata_contig1772:9616..9818Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 9617..9818 -
1622930025.071566-CDS-H-elongata_contig1772:10439..105671622930025.071566-CDS-H-elongata_contig1772:10439..10567Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 10440..10567 -
1691679251.1589744-CDS-H-elongata_contig1772:10439..105671691679251.1589744-CDS-H-elongata_contig1772:10439..10567Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 10440..10567 -
1622930025.0878527-CDS-H-elongata_contig1772:11486..115881622930025.0878527-CDS-H-elongata_contig1772:11486..11588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 11487..11588 -
1691679251.1673934-CDS-H-elongata_contig1772:11486..115881691679251.1673934-CDS-H-elongata_contig1772:11486..11588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 11487..11588 -
1622930025.1089597-CDS-H-elongata_contig1772:11809..119611622930025.1089597-CDS-H-elongata_contig1772:11809..11961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 11810..11961 -
1691679251.1786013-CDS-H-elongata_contig1772:11809..119611691679251.1786013-CDS-H-elongata_contig1772:11809..11961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 11810..11961 -
1622930025.1245184-CDS-H-elongata_contig1772:12343..124571622930025.1245184-CDS-H-elongata_contig1772:12343..12457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 12344..12457 -
1691679251.1860507-CDS-H-elongata_contig1772:12343..124571691679251.1860507-CDS-H-elongata_contig1772:12343..12457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 12344..12457 -
1622930025.139523-CDS-H-elongata_contig1772:12977..132191622930025.139523-CDS-H-elongata_contig1772:12977..13219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 12978..13219 -
1691679251.1932302-CDS-H-elongata_contig1772:12977..132191691679251.1932302-CDS-H-elongata_contig1772:12977..13219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 12978..13219 -
1622930025.1563947-CDS-H-elongata_contig1772:13591..136861622930025.1563947-CDS-H-elongata_contig1772:13591..13686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 13592..13686 -
1691679251.200423-CDS-H-elongata_contig1772:13591..136861691679251.200423-CDS-H-elongata_contig1772:13591..13686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 13592..13686 -
1622930025.1702323-CDS-H-elongata_contig1772:13749..140731622930025.1702323-CDS-H-elongata_contig1772:13749..14073Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 13750..14073 -
1691679251.219161-CDS-H-elongata_contig1772:13749..140731691679251.219161-CDS-H-elongata_contig1772:13749..14073Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1772 13750..14073 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1772.4649.1prot_H-elongata_contig1772.4649.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1772 6084..14073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1772.4649.1

>prot_H-elongata_contig1772.4649.1 ID=prot_H-elongata_contig1772.4649.1|Name=mRNA_H-elongata_contig1772.4649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=796bp
MCRRFHANTIYTNVADVLVSINPYKHIPGLYDIPMPAATPPKPSLALTDE
ATSTSSASSLAGRGVQGPSSGSRVAERAAALMRGFHENSGRGAPKSSSHP
HWGRRSESEDVARGTKARLAALKSILGKPHVYGVADRAFQYMAETQGREV
NGRIRKRNQSILITGESGSGKTEASKHVMRFLTTASRALAGSESVELSSG
GVRDTARGTVGEMRRKIEIVPTATSAVEHMEDILLKSNTVLEAFGNAKTV
RNDNSSRFGKYIKLMYDEDCCLIGAKTEHFLLEKSRLVHLDDGERSYHIL
YQARDETKRVPKSLSRKMKVELRLVAGAKAFKLLNQGNCLDASEGVDDRE
EFKAVDKALSSLEFSKGEKEDIWRLIAAILHSGEVSRFEDLPGTDHCRMV
QTGDVDRKRKLTLSAGELAALWGVEKVKLEAGVMQRTVTVGDSSASVKLN
AAQAKDNLLALLKHMYRQLFAWINWKINAVFNVPGGIQGRGSGFGHTFIG
ILDIFGFEIMATNSFEQLCINYANEVLQRQFNHHIFVLEQARFNEEYGAE
GLDVASIPFRDNQSIINLIAKRPAGLMPILEDQALTGRQAASLRASFTDK
NLIELFHQQHHRRAPHPCYRKPRFDGPEFVVMHYAGDVTYCATGFLEKNN
DTLQEDLRALLLSSSIPFLRQGLILFSILPYVRTPSRYTSVENHIEMSVA
ALRGTPQMLQRWWSTRRTRADSSEKPQRGCYISHTVIRCELSPTRSWLDD
GGGANGGSCSGASAVETSAKAQSYPLARSGGKLKMAVKTKMAARTT
back to top

mRNA from alignment at H-elongata_contig1772:6084..14073-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1772.4649.1 ID=mRNA_H-elongata_contig1772.4649.1|Name=mRNA_H-elongata_contig1772.4649.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7990bp|location=Sequence derived from alignment at H-elongata_contig1772:6084..14073- (Himanthalia elongata Himel1 dioecious)
ATGTGCAGGCGATTCCACGCCAACACCATTTACACCAACGTGGCCGACGT GCTGGTATCCATCAACCCGTACAAGCATATCCCGGGTCTTTACGACATCC CTATGCCCGCCGCAACTCCACCGAAGCCATCATTGGCTCTCACTGATGAG GCGACATCAACGTCATCGGCCTCATCGCTGGCGGGGCGCGGAGTGCAGGG CCCGTCGTCTGGTAGTCGAGTCGCCGAGAGGGCGGCCGCCCTCATGCGCG GGTTTCACGAGAACAGCGGCAGGGGAGCGCCCAAGAGCTCCTCGCACCCT CACTGGGGGCGCAGGAGCGAAAGTGTCAGACCCGATGATGAGAAGGGACC GGTACCGTCAAATGGGCACAGCCAGAGTAAAGTTAAGGAAGACGTGGCCA GGGGGACGAAGGCTCGACTGGCAGCACTGAAGAGTATCCTCGGGAAGCCG CACGTATACGGCGTGGCGGACAGGGCTTTCCAGTGAGAGATTTCGCGCGC ATTGTTTCGTAAAAAAGGAATCGTAAAATAGGTTGCGGCGAGAGAGAGAA AGAGAGCGAAAAAAAAAATGTGAGGATAACGCGCGTATCTTGGGAAGAAG CAGAGCACCACACCATGCTCGTCGATCGATTGGCCAAAAACAGAAATGAG CTGCTGGGACTGACTGGAGTCATGGGTCGTGCAAAAAGCTCGGCAATAAA GTAATATAAACTGTTTATGCTCCAAGCGGCTCGCTGAACCCTAATCCGAC CGAAGTTGTTATTCTAGCGTGGTTGCAAGTTTCAAATTCGCCTTGTAACT TTCGCAACACGCCATGGTCATACTATTTTTGTGCCGCACTCGCGGAATAT CCAGGTACATGGCTGAGACGCAAGGTAGGGAAGTCAACGGTCGCATCCGG AAGAGAAACCAGTCCATCCTTATCACTGGGGAGTCAGGATCAGGAAAAAC AGAAGCTTCGAAACATGTCATGCGCTTCCTCACAACCGCCAGTCGGGCGC TGGCAGGGTCAGAGAGTGTGGAGCTTTCTTCGGGAGGCGTTCGTGATACT GCCCGTGGAACTGTAGGTGAGATGCGAAGGAAAATCGAGATTGTGCGTCT AGAGGAGCATGCTGTTCAGGTATGATAGGAATTGTATGTAATATCGGTTA CGAATCTGGCGGGAGCTCGGGTCCATCTCGGGTGGAAATTGAAGCAGTGG AAGAGAATTGCAGAATACGCTTATTTGAGACTGCGGCCCAATCAAAGCAG TAGGAGTGTTGCCGCAAGTGCCTCGGCATTTTTTTTGCGGCTTCTTATTG GTCCATGGCTTTCGCAAGCTAGGCCGTTCCGATAGAAAATAATGTGGAGG CGAATGATCCTGTCTGGGAGCTAGGGCCTCTTACACAACTGCATGGGTTG TTCTGATATTTTTTTCAAGCCTACGCGCAGGGAATGGGAGCGAAGCAAAC ACCTTGGTGCCTTGCTCAACCTCTTCGTCAAAGCATTACAGCACCCCTAG CCCACCCTCGTTTGCACTATTTGCCCCCGTCCTGTCTTCCCCTTGAGTTT TTCTTATTTTTATTTTCCCCCATTTCTCGCTACCTCTTGTTCCTCTACTT CGGGTAGACGACACAGCAACGGCAACCTCAGCGGTAGAGCACATGGAAGA TATCCTCTTGAAAAGTAACACAGTTTTGGAGGCGTTCGGCAACGCGAAGA CCGTGCGGAACGACAACTCCAGCCGCTTCGGTAATTGTCAAGCTGTCCCC CTTATCCCCCAGTCTAATTTTTCTTTTTTGGTGTCTAAACCCGGTTTCCT CCAAGGACAGCCAAACATGAAACGTGAGGTTCAAATATGTTTTGTTTGCC CAAATAGGTTGTAGTGAAAGTGCTTTCGCCCAGCATTGCATAGCGAAACT ATCTCGAAAGTGGAGGTGGTGGGTAGAGGAGTGGGTAGGCGAGTGGACAC ACCTACGTTTGATACACTCCTTTTTGTCCGGATTGTCGAACTGTTTGCCA ACATTTGTGCCTACCACAAGAACCCTGCGAGAATGACTCTATTGAGTTTA TCTAATCAGCAACATACGCATGGAAAGTCTTTCCTGACATGTTTCTCACC CGCGTTCCGAAGGTAAGTACATCAAGTTGATGTACGATGAAGATTGCTGT CTCATTGGAGCGAAGACTGAACACTTCCTCCTTGAGAAGTCGAGACTCGT GCACCTAGACGACGGGGAGCGGAGTTATCACATCCTATATCAGGCGAGAG ACGAGACGAAGCGGGTTAGCCACGGAGACATCAATATATGGCATCCTCAG AAAGAGAAGGAAATATATCGTCATATAATCACAGTTCATCCAAATCATCT ATGGTTCGCGTACGCATCTAGGCAAGTTCCAAATACCCACACCTCTGCTA TATATGGCAGCCCTGCATCTTCGGCTAAACTATCGGCGTATTCAATCTCT TATCAATCTGCGCCCTCTCATACGCCATCTCTCAGGTGCCTAAGTCGTTG TCCAGGAAGATGAAGGTGGAGCTGAGACTCGTTGCCGGTGCGAAGGCCTT CAAGCTGCTGAATCAGGGCAACTGCCTTGATGCATCGGTGCGGGAAACTC AAAGAATCTGCACTAGAAAAGTGAAGACATCTATGCCAGAATATTCCGAT AATATTGCATAGGGGAGGCTTCCTTGGCGCAAGTTATATGGCCGGCACGC GTTTTGGTTCAAGCTCGCTGCTACCGCGAATTTCCTACCACGGCATCCGA TATATATATTTATGGGAAAATGGTGTCTGAATAGCACACGAAGTTAGCGT TCTCTTATATTTCTGCAAACCGTCATTTCCACTCTACCCATAGTGGGTGT GGAAAAAGAGAGGCATAAAATAATTGGTCCATGAGATTACCTCAATAGGC TTCACCCGCTACTCAAGCTACCTTGAGGACCATTGGCTTAGTACCGGTGG GCTCTCGGTAGTAAACGCTATCAGTACGCAATTGCGTGGCCTGATGAAAT CGGGATTGGCCCGATGGCGGTTGACGGTAAAGATGGACGCCATCGCGAAA AACGGGAGGATCGAGAGGATCCCGGGAGTAAGCACCAGATTCGGCCTGGG TTGAGAAAATTAGCAGGCTGACACGGGAAGGGACTGCCGAACCCGTCTCG CGAGACCAAATTCATTAGGCGCGAACGGGGGCAGGGATAATTATTTTCCC TGTTCAGCTGACCACGAGCAGAAGGCAACCAAATCCAGTTGATCTCCTGC CGAAAGTGTGACCATATATACATACTCTGCTAAATCTGATGACTATGCAT ACATACATATTTTTAGAAGCACAATACAGCAAACCAATTGTTCGAAGCCG ACCAATCAAGTACATCCATATATTCATCTCCGATTCCTTTACTTGCATGT TTTCTTTATTAAACTTAAAAAAACGTCCCATAACTGTGGAAAGTGCTTCC CACCTGCCTCTACTAGACCTTTGAGTTTATTGTATTTAATGGTTGGCGAT TTCCAGGAAGGTGTGGACGACCGCGAGGAGTTCAAGGCAGTAGATAAGGC GTTATCGTCATTGGAGTTCTCGAAGGGAGAAAAGGAGGACATATGGAGGC TCATCGCGGCAATCTTGCACAGCGGCGAAGTCAGGTAAATACGGATCTAA CCCTCTTTCAGTCCGGCAAACGCCATGAAAGCCACGGACACACTCCCCTA AACGAGCGAGCATACCATTGTCAGGCGTCATCCCATGATTTCATGTTACT GTGCGTACTACTGTAATGTACTTGCTCAACACGAAGAGCGGCAAGTAGCG GTAATTTCGGTGCAAATACTCGTTTCGTACCCTGGCACCGCCTTGAGCCC ACGGACCCGGCCATTTCACGACAAGCGTCAGGCAGAGGGCGGCGGTGGCA AACATCGACCAACCAACTGACCGTCCGACACATGGACTCACCTCAAATGT ACCCAAAGGGGATGGATCTCGTTCACCCTCCCTCTTAACAAAGCGTTATT CTTGCGACGAGTGTCCCGAGCAAGTGATGTGATGCAAGAGTGAGATTGGC TTTCGGAGCCATAATGGTATTTGCTTGTTATGAGGAGAAGAGAGGGGGGC GTGTTCATGTTTTGTATGCCCTAGCTGCTATACGGTTGACCACTCAGTCT CAGGAAGACGGGGAGGGTTCTCACCTTAACTAAACAAGACAGGGATTGAA TCTCCTGATAACATTCCCCTCATCTCCTCGGTTCCTAACGCACACGTATC ATGAGTAGATTCGAGGACTTGCCTGGAACGGACCACTGCCGGATGGTACA AACCGGTGACGTGGACCGGAAGCGAAAGCTGACCCTGTCTGCTGGCGAGC TTGCCGCTCTTTGGGGAGTTGAGAAAGTTAAGCTCGAGGCGGGGGTGATG CAGAGAACCGTCACTGTCGGAGACTCAAGTGCTTCCGTCAAGCTCAACGC CGCACAGGTTGTTTATGCGTGCAGGTATATGTATGTGTCTGTTTATTTTG TCTCTCCCCAAGGGCGCAAACAAGCTTCACTCTTCGATGCGCCAGCTTAC AGGAAACGGGGCCAATCAAGCCAATTTCGATGCTGATGTGTTTCAAGGGG GTTAAATCATTTTGGCGTACGTATTTTCAAGTAGTTTTTCCGGGGAATTA AGGGCGTTTCCTCGACGCTCGTATGATCGCCGTCGCCTCTTGTCACTCCG GCGTATTGTCAGGCCAAGGACAACCTTCTAGCGCTGCTGAAGCATATGTA CAGACAGCTTTTCGCGTGGATCAACTGGAAGATCAACGCAGTCTTCAACG TACCCGGGGGGATTCAAGGCCGGGGGAGCGGGTTTGGCCATACGTTCATC GGCATCCTCGATATTTTCGGTGAATCAATATTTGAAAAATAAGTCCTTCG ACATGTGAACCACGCGTAATTAATACACAAATAGGAATAAGGAATGAAGA TATTATGGTGAAGTTAGGTGTAGCAAAAAATGATTTAATAGAGCGCGTGT GCGTTCCTTGGTGTTGCGCGCCTTTCACCCCAAAAGACGCGCCGCGGTCC GATATGCGCGTTGTTGCCTCGCTAAACGCCGCCAGACGGTTGATGGCGTG GGATAGTCGACGCCCAATTGTATCCGACACATTTGGGTCTCACCGCTTGT CTTCTCAAGGAGATGTAAGTTCTCTCGTTTCTCCATCGGTGCTCTGTCGT TAAAAGGGTTCGAAATCATGGCGACCAACAGCTTCGAGCAACTGTGCATC AATTACGCCAACGAGGTCTTGCAGCGGCAGTTCAACCACCATATCTTCGT GCTCGAGCAGGCAAGATTTAATGTGAAGGGATAGGAAACAAGGCTGCTGA ATGCACCACATACCTGGTTTCATATTTTACCGTAGTTGGGTTGATTTCAA CGTATCAAGCGAATTTATTGTAGAGAGCCTTTACACAATAGCAGGCGAAA CAAAACTGGGGGCTTGGTCTTAGGAGCTTGGGCTTGTTGGTAGAGAACTG TCATCTCATACAAGTATGACTCTATTTGAAGTATAAACATCAACATTCGA CATTCATTCGGTTGCGAGGGGTCGTCCAATCCATCCTACATTTATTTAAA AAAACCTTGAACTAATTCCAACTCTCCGAATATCCACACCTTCTTAGCAC CATGGGAGGTGTAGTCCAGGGGACCAACTACGTTTAAAGTATCTATCGTT TTATATTTTCTCCTGCAGGAGGAGTACGGTGCCGAAGGGCTTGACGTGGC GTCCATTCCCTTCAGGGACAACCAAAGCATAATCAATCTCATAGCCAAGC GGCCAGCGGGGCTCATGCCAATCCTCGAGGATCAGGTACGCTTTCGTTGA GCACCCGCGAAGAAATGGAATATTGTAATGTAGTCATAAGATAGCCTCAT AAGACTATATTCTGTCGACCTGTGGTGGTACATCTCGTTACCTTAAGCCG CTGTAGGTGTAATTTGTAGCAGAATTTTTCAGGATTTTGCCCACTTTTTT CGCTTGAGCCGAGACTTCGTTCGGGACTCGACTTGGTAATTTACCTATTG TACATTTAAACCTTCATTACCAAATAATGGCATAACAAATAACTTCACCG ATGCTTTTTTCCCATTTTATTCGTAAGAATGCTTTTCGATCCTGATAATA TTACCATACCTAAATCATTTAATATATTTGGCAGGTGGTGACCAGACTAC CTTTTTCCACAAAGTCCCTCTGGGCACAACCAAACCGATTTCCTCCGCAC TCGATTACGCTCCGCGTGGTCGAATAAAAAGGGCGTTAAAATGCAACCCG ACGCAAACCGCTTCGTCCACCTCGGGTAAGATCGGCGTTACGCGTCTGGT GATACACTATTGCTTCTACCTCTCTTGCCCCCCTTTTGGCGCCACGCGGT CAGGCCCTGACCGGCAGGCAGGCGGCTTCCCTGAGGGCGTCCTTCACAGA CAAGAACCTTATCGAACTCTTCCACCAGCAGCACCACCGGAGGGCCCCGC ACCCATGCTATCGCAAGCCCCGCTTCGATGGGCCGGAGTTCGTCGTCATG CACTACGCCGGAGACGTGAGCAATTATTACAACATCTCTTCCTTCCTTAT GAATATCGGTTTGGTCAAGCTAACCTATCCGTGATAGTGTTTGCCGATAT CTCTCTACATTGCCGCAGAGTAGATGACGGTGCACAACAGACCCTGGGGT AATATAGATGCCCCTTAACCCGACTTTCTAAGGTACTCGGCAGTTCAGAC ACCACCGATGTCCCACGCGTCGTTCTGTATTCGGGAAGATATTATACCCG ATGGTGTACTTTACAATACTCGGCAATCTATGCGTACAGGTTTGCTGCGT TCAAGCCAACGTTTGGAAGTCCATTACCTCCCCGTGCAGTGCGATGGACT GCTCTTGTGTACCCTATGTCTGTGCCCAAACAATTCGCGGATCGACAGGA TAACCCATGAAACGTTTCTCCCCTAGCAACAGCGCACCTTATTCTTCTGT TTTCTTGAAGTATGTCGTACTTTTCGTATTACTTGCTTTGGTGCATCGCA TGCTCGTGAGCATGATATAATTCCCTCCATCGAAAGCATCGTATTATTTG CATATCGCAAGGTGACCTACTGCGCTACTGGCTTCCTGGAGAAGAACAAC GATACCCTCCAGGAAGATCTCCGTGCTCTGCTCCTCTCCAGCAGTATCCC TTTCCTCCGACAGGTGACAAGCAGGTCAAATAAATAATATATCATGGAGT TGGAAATTTCGATATCCCCTTATTCTTAACACTACGGTGCGCACAGATGC TACAAGCTACCCGAAGCTAAGATATTTAAGAGATTACTACGAGATATTAT TATTTGTGATATTTTTGGCTGAGTTTATCCGAAAGCGAGGCAATCGAACG AGAAAACCAATCCCGGCAAGGGAAGGGCCTGATACTATTTTCCATCCTGC CATACGTGCGTACGCCGTCACGGTACACCAGTGTGGAAAATCATATTGAA ATGAGTGTAGCTGCATTGAGGGGGACACCGCAAATGCTGCAGCGCTGGTG GAGTACGAGAAGAACAAGAGCAGACAGCAGTGAAAAACCCCAGCGAGGGT GTTACATAAGTCACACAGTAATAAGATGCGAATTATCTCCTACAAGAAGT TGGTTAGATGATGGCGGGGGGGGTGAGAAGGAGCGCGCGGTGATTATTCC GCGTATTTTTTTTGCATATCCTCCTATCGCCACCGCCGCTCTCCTGCCAG CTCATCCTTGACGAGGAAAACGGCACCTTCGAGCTGGGCGCACTAGACTC CCGGAATGGATTTCCCTGCGATCGTCCTCCTCCGAAAGACATCCGTACCA AGCAGCTCGAAGCCAACGGTGGCAGCTGCAGTGGTGCTTCAGCTGTGGAG ACGTCTGCCAAAGCACAATCATATCCCCTAGCGCGGAGCGGCGGGAAGCT GAAGATGGCGGTGAAGACGAAAATGGCTGCAAGGACGACG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig1772:6084..14073-

>mRNA_H-elongata_contig1772.4649.1 ID=mRNA_H-elongata_contig1772.4649.1|Name=mRNA_H-elongata_contig1772.4649.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4776bp|location=Sequence derived from alignment at H-elongata_contig1772:6084..14073- (Himanthalia elongata Himel1 dioecious)
ATGTGCAGGCGATTCCACGCCAACACCATTTACACCAACGTGGCCGACGT
GCTGGTATCCATCAACCCGTACAAGCATATCCCGGGTCTTTACGACATCC
CTATGCCCGCCGCAACTCCACCGAAGCCATCATTGGCTCTCACTGATGAG
GCGACATCAACGTCATCGGCCTCATCGCTGGCGGGGCGCGGAGTGCAGGG
CCCGTCGTCTGGTAGTCGAGTCGCCGAGAGGGCGGCCGCCCTCATGCGCG
GGTTTCACGAGAACAGCGGCAGGGGAGCGCCCAAGAGCTCCTCGCACCCT
CACTGGGGGCGCAGGAGCGAAAGTATGTGCAGGCGATTCCACGCCAACAC
CATTTACACCAACGTGGCCGACGTGCTGGTATCCATCAACCCGTACAAGC
ATATCCCGGGTCTTTACGACATCCCTATGCCCGCCGCAACTCCACCGAAG
CCATCATTGGCTCTCACTGATGAGGCGACATCAACGTCATCGGCCTCATC
GCTGGCGGGGCGCGGAGTGCAGGGCCCGTCGTCTGGTAGTCGAGTCGCCG
AGAGGGCGGCCGCCCTCATGCGCGGGTTTCACGAGAACAGCGGCAGGGGA
GCGCCCAAGAGCTCCTCGCACCCTCACTGGGGGCGCAGGAGCGAAAGTGA
AGACGTGGCCAGGGGGACGAAGGCTCGACTGGCAGCACTGAAGAGTATCC
TCGGGAAGCCGCACGTATACGGCGTGGCGGACAGGGCTTTCCAGAAGACG
TGGCCAGGGGGACGAAGGCTCGACTGGCAGCACTGAAGAGTATCCTCGGG
AAGCCGCACGTATACGGCGTGGCGGACAGGGCTTTCCAGTACATGGCTGA
GACGCAAGGTAGGGAAGTCAACGGTCGCATCCGGAAGAGAAACCAGTCCA
TCCTTATCACTGGGGAGTCAGGATCAGGAAAAACAGAAGCTTCGAAACAT
GTCATGCGCTTCCTCACAACCGCCAGTCGGGCGCTGGCAGGGTCAGAGAG
TGTGGAGCTTTCTTCGGGAGGCGTTCGTGATACTGCCCGTGGAACTGTAG
GTGAGATGCGAAGGAAAATCGAGATTGTGCGTACATGGCTGAGACGCAAG
GTAGGGAAGTCAACGGTCGCATCCGGAAGAGAAACCAGTCCATCCTTATC
ACTGGGGAGTCAGGATCAGGAAAAACAGAAGCTTCGAAACATGTCATGCG
CTTCCTCACAACCGCCAGTCGGGCGCTGGCAGGGTCAGAGAGTGTGGAGC
TTTCTTCGGGAGGCGTTCGTGATACTGCCCGTGGAACTGTAGGTGAGATG
CGAAGGAAAATCGAGATTGTGCCAACGGCAACCTCAGCGGTAGAGCACAT
GGAAGATATCCTCTTGAAAAGTAACACAGTTTTGGAGGCGTTCGGCAACG
CGAAGACCGTGCGGAACGACAACTCCAGCCGCTTCGCAACGGCAACCTCA
GCGGTAGAGCACATGGAAGATATCCTCTTGAAAAGTAACACAGTTTTGGA
GGCGTTCGGCAACGCGAAGACCGTGCGGAACGACAACTCCAGCCGCTTCG
GTAAGTACATCAAGTTGATGTACGATGAAGATTGCTGTCTCATTGGAGCG
AAGACTGAACACTTCCTCCTTGAGAAGTCGAGACTCGTGCACCTAGACGA
CGGGGAGCGGAGTTATCACATCCTATATCAGGCGAGAGACGAGACGAAGC
GGGTAAGTACATCAAGTTGATGTACGATGAAGATTGCTGTCTCATTGGAG
CGAAGACTGAACACTTCCTCCTTGAGAAGTCGAGACTCGTGCACCTAGAC
GACGGGGAGCGGAGTTATCACATCCTATATCAGGCGAGAGACGAGACGAA
GCGGGTGCCTAAGTCGTTGTCCAGGAAGATGAAGGTGGAGCTGAGACTCG
TTGCCGGTGCGAAGGCCTTCAAGCTGCTGAATCAGGGCAACTGCCTTGAT
GCATCGGTGCCTAAGTCGTTGTCCAGGAAGATGAAGGTGGAGCTGAGACT
CGTTGCCGGTGCGAAGGCCTTCAAGCTGCTGAATCAGGGCAACTGCCTTG
ATGCATCGGAAGGTGTGGACGACCGCGAGGAGTTCAAGGCAGTAGATAAG
GCGTTATCGTCATTGGAGTTCTCGAAGGGAGAAAAGGAGGACATATGGAG
GCTCATCGCGGCAATCTTGCACAGCGGCGAAGTCAGGAAGGTGTGGACGA
CCGCGAGGAGTTCAAGGCAGTAGATAAGGCGTTATCGTCATTGGAGTTCT
CGAAGGGAGAAAAGGAGGACATATGGAGGCTCATCGCGGCAATCTTGCAC
AGCGGCGAAGTCAGTAGATTCGAGGACTTGCCTGGAACGGACCACTGCCG
GATGGTACAAACCGGTGACGTGGACCGGAAGCGAAAGCTGACCCTGTCTG
CTGGCGAGCTTGCCGCTCTTTGGGGAGTTGAGAAAGTTAAGCTCGAGGCG
GGGGTGATGCAGAGAACCGTCACTGTCGGAGACTCAAGTGCTTCCGTCAA
GCTCAACGCCGCACAGTAGATTCGAGGACTTGCCTGGAACGGACCACTGC
CGGATGGTACAAACCGGTGACGTGGACCGGAAGCGAAAGCTGACCCTGTC
TGCTGGCGAGCTTGCCGCTCTTTGGGGAGTTGAGAAAGTTAAGCTCGAGG
CGGGGGTGATGCAGAGAACCGTCACTGTCGGAGACTCAAGTGCTTCCGTC
AAGCTCAACGCCGCACAGGCCAAGGACAACCTTCTAGCGCTGCTGAAGCA
TATGTACAGACAGCTTTTCGCGTGGATCAACTGGAAGATCAACGCAGTCT
TCAACGTACCCGGGGGGATTCAAGGCCGGGGGAGCGGGTTTGGCCATACG
TTCATCGGCATCCTCGATATTTTCGGCCAAGGACAACCTTCTAGCGCTGC
TGAAGCATATGTACAGACAGCTTTTCGCGTGGATCAACTGGAAGATCAAC
GCAGTCTTCAACGTACCCGGGGGGATTCAAGGCCGGGGGAGCGGGTTTGG
CCATACGTTCATCGGCATCCTCGATATTTTCGGGTTCGAAATCATGGCGA
CCAACAGCTTCGAGCAACTGTGCATCAATTACGCCAACGAGGTCTTGCAG
CGGCAGTTCAACCACCATATCTTCGTGCTCGAGCAGGCAAGATTTAATGG
TTCGAAATCATGGCGACCAACAGCTTCGAGCAACTGTGCATCAATTACGC
CAACGAGGTCTTGCAGCGGCAGTTCAACCACCATATCTTCGTGCTCGAGC
AGGCAAGATTTAATGAGGAGTACGGTGCCGAAGGGCTTGACGTGGCGTCC
ATTCCCTTCAGGGACAACCAAAGCATAATCAATCTCATAGCCAAGCGGCC
AGCGGGGCTCATGCCAATCCTCGAGGATCAGGAGGAGTACGGTGCCGAAG
GGCTTGACGTGGCGTCCATTCCCTTCAGGGACAACCAAAGCATAATCAAT
CTCATAGCCAAGCGGCCAGCGGGGCTCATGCCAATCCTCGAGGATCAGGC
CCTGACCGGCAGGCAGGCGGCTTCCCTGAGGGCGTCCTTCACAGACAAGA
ACCTTATCGAACTCTTCCACCAGCAGCACCACCGGAGGGCCCCGCACCCA
TGCTATCGCAAGCCCCGCTTCGATGGGCCGGAGTTCGTCGTCATGCACTA
CGCCGGAGACGCCCTGACCGGCAGGCAGGCGGCTTCCCTGAGGGCGTCCT
TCACAGACAAGAACCTTATCGAACTCTTCCACCAGCAGCACCACCGGAGG
GCCCCGCACCCATGCTATCGCAAGCCCCGCTTCGATGGGCCGGAGTTCGT
CGTCATGCACTACGCCGGAGACGTGACCTACTGCGCTACTGGCTTCCTGG
AGAAGAACAACGATACCCTCCAGGAAGATCTCCGTGCTCTGCTCCTCTCC
AGCAGTATCCCTTTCCTCCGACAGGTGACCTACTGCGCTACTGGCTTCCT
GGAGAAGAACAACGATACCCTCCAGGAAGATCTCCGTGCTCTGCTCCTCT
CCAGCAGTATCCCTTTCCTCCGACAGGGCCTGATACTATTTTCCATCCTG
CCATACGTGCGTACGCCGTCACGGTACACCAGTGTGGAAAATCATATTGA
AATGAGTGTAGCTGCATTGAGGGGGACACCGCAAATGCTGCAGCGCTGGT
GGAGTACGAGAAGAACAAGAGCAGACAGCAGTGAAAAACCCCAGCGAGGG
TGTTACATAAGTCACACAGTAATAAGATGCGAATTATCTCCTACAAGAAG
TTGGTTAGATGATGGCGGGGGGGGGCCTGATACTATTTTCCATCCTGCCA
TACGTGCGTACGCCGTCACGGTACACCAGTGTGGAAAATCATATTGAAAT
GAGTGTAGCTGCATTGAGGGGGACACCGCAAATGCTGCAGCGCTGGTGGA
GTACGAGAAGAACAAGAGCAGACAGCAGTGAAAAACCCCAGCGAGGGTGT
TACATAAGTCACACAGTAATAAGATGCGAATTATCTCCTACAAGAAGTTG
GTTAGATGATGGCGGGGGGGCCAACGGTGGCAGCTGCAGTGGTGCTTCAG
CTGTGGAGACGTCTGCCAAAGCACAATCATATCCCCTAGCGCGGAGCGGC
GGGAAGCTGAAGATGGCGGTGAAGACGAAAATGGCTGCAAGGACGACGCC
AACGGTGGCAGCTGCAGTGGTGCTTCAGCTGTGGAGACGTCTGCCAAAGC
ACAATCATATCCCCTAGCGCGGAGCGGCGGGAAGCTGAAGATGGCGGTGA
AGACGAAAATGGCTGCAAGGACGACG
back to top