mRNA_H-elongata_contig175588.4577.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: UPI00092ED33F (uncharacterized protein LOC109339874 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092ED33F) HSP 1 Score: 60.8 bits (146), Expect = 4.290e-9 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDKD 222
P WW +YG G P+L ++AIR S+ +S+G ERNWS++ + + R+ ++ LV+VR NLRLQ ++
Sbjct: 260 PDQWWESYG-CGAPNLQQLAIRILSQTYSSSGCERNWSVFEHIHSNKRNRLEHQKLNDLVYVRYNLRLQQRN 330
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: A0A6A5M7K7_LUPAL (Phosphopyruvate hydratase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5M7K7_LUPAL) HSP 1 Score: 60.8 bits (146), Expect = 4.410e-9 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 IFPADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDK 219
+ P WW TYG P+L K+A+R S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 674 VMPDQWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 745
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: UPI00092EBF14 (uncharacterized protein LOC109333050 n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092EBF14) HSP 1 Score: 60.1 bits (144), Expect = 6.440e-9 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDKD 222
P WW +YG G P+L ++AIR S+ +++G ERNWS++ + + R+ ++ LV+VR NLRLQ ++
Sbjct: 119 PDQWWESYG-CGAPNLQQLAIRILSQTCSASGCERNWSVFEHIHSNKRNRLEHQKLNDLVYVRYNLRLQQRN 189
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: A0A6A5MXA4_LUPAL (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MXA4_LUPAL) HSP 1 Score: 57.8 bits (138), Expect = 1.570e-8 Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 13 DWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDK 219
WW TYG P+L K+A+R S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 4 QWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 71
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: A0A2K3K1Y4_TRIPR (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K1Y4_TRIPR) HSP 1 Score: 56.6 bits (135), Expect = 1.910e-8 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 13 DWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDKD 222
WW YG P+L K+AIR S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ+++
Sbjct: 2 QWWEMYGTEA-PNLKKLAIRILSQTCSASGCERNWSVFEHIHSKKRNRLEHQKLNDLVFVRYNLRLQNRN 70
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: A0A6A5N2L1_LUPAL (BED-type domain-containing protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5N2L1_LUPAL) HSP 1 Score: 58.9 bits (141), Expect = 2.090e-8 Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 IFPADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDK 219
+ P WW TY + P+L K+A+R S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 433 VMPDQWWETY-RCCTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLENQKLNDLVFVRYNLRLQQR 504
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: UPI00092F4EA0 (uncharacterized protein LOC109333975 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F4EA0) HSP 1 Score: 58.2 bits (139), Expect = 3.790e-8 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 13 DWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDKD 222
WW TYG P+L K+A+R S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ ++
Sbjct: 248 QWWETYG-CRAPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQRN 316
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: UPI000E701CD2 (uncharacterized protein LOC113288024 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E701CD2) HSP 1 Score: 57.4 bits (137), Expect = 7.200e-8 Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDK 219
PA WW +YG P+L +VA+R S ++ G ERNWS + V R R+ +R LV+V+ NLRL ++
Sbjct: 282 PALWWNSYG-YSAPELQRVAVRVLSSTCSATGCERNWSEFEQVHTKRRNRLSQQRLNALVYVKYNLRLNER 351
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: A0A2Z6NFM0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NFM0_TRISU) HSP 1 Score: 57.4 bits (137), Expect = 7.290e-8 Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 IFPADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDKD 222
+ P WW YG P+L K+AI S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ+++
Sbjct: 508 VLPDQWWEMYGTEA-PNLKKLAIWILSQTCSASGCERNWSVFEHIQSKKRNRLEHQKLNDLVFVRYNLRLQNRN 580
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Match: UPI00092F8957 (uncharacterized protein LOC109329267 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F8957) HSP 1 Score: 55.8 bits (133), Expect = 2.500e-7 Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 13 DWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHARMGPERARKLVFVRANLRLQDK 219
WW TYG P+L ++ +R S+ +++G ERNWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 263 QWWETYG-CRTPNLQRLTVRVLSQTCSASGCERNWSVFEHIHSNKRNRLEHQKLNDLVFVRYNLRLQQR 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175588.4577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig175588.4577.1 >prot_H-elongata_contig175588.4577.1 ID=prot_H-elongata_contig175588.4577.1|Name=mRNA_H-elongata_contig175588.4577.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp IFPADWWVTYGKIGLPDLAKVAIRRTSKVSASAGLERNWSLYGDVMGGRHback to top mRNA from alignment at H-elongata_contig175588:1015..1236+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig175588.4577.1 ID=mRNA_H-elongata_contig175588.4577.1|Name=mRNA_H-elongata_contig175588.4577.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=222bp|location=Sequence derived from alignment at H-elongata_contig175588:1015..1236+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig175588:1015..1236+ >mRNA_H-elongata_contig175588.4577.1 ID=mRNA_H-elongata_contig175588.4577.1|Name=mRNA_H-elongata_contig175588.4577.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig175588:1015..1236+ (Himanthalia elongata Himel1 dioecious)back to top |