mRNA_H-elongata_contig17531.4569.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: D7FVC7_ECTSI (CTR-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC7_ECTSI) HSP 1 Score: 322 bits (826), Expect = 1.130e-108 Identity = 152/202 (75.25%), Postives = 172/202 (85.15%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEIESLTLEL 606
L+ SQL HPNIV YGA M+PPNLF+VMELCQRSLFDLLH+CRR IG R R+ M LDVSR+++YLHSR+PPIIHRDLKSLNLLLAG EGPVKLCDFGLVRT+VTAAGT AYM+P+LL +PFNKSVDVYAFG+LLWEIFSREIPF G+E +DIRE V SGGRP V RG CP +I+ LMCRCWS NP +RP GEIE + EL
Sbjct: 80 LVLSQLSHPNIVRFYGASMIPPNLFFVMELCQRSLFDLLHHCRRTIGVRRRIGMALDVSRAMEYLHSRNPPIIHRDLKSLNLLLAGTEGPVKLCDFGLVRTTVTAAGTVAYMSPQLLLGQPFNKSVDVYAFGVLLWEIFSREIPFNGFEVADIREAVVSGGRPTVPRGDCPREISSLMCRCWSENPQQRPAFGEIEEILQEL 281
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A835YIR4_9STRA (CTR-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR4_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.970e-75 Identity = 113/199 (56.78%), Postives = 147/199 (73.87%), Query Frame = 1
Query: 10 SQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEIESLTLEL 606
+QLRHPNIV + G PP+LF++MELC+ S+++ LH RR G +E + + LD +++YLHS+SPP++HRDLKS NLL+ G +G KLCDFGLV TS T AGTP YMAPELLQ RPF KSVDVYAFGILLWE+FS+++PF+G E D++EVV +G RP V RG P I +M +CW+ P+ERPT G+ + EL
Sbjct: 59 AQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLI-GADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQEL 256
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A7S2UTB3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTB3_9STRA) HSP 1 Score: 223 bits (569), Expect = 2.190e-70 Identity = 109/194 (56.19%), Postives = 137/194 (70.62%), Query Frame = 1
Query: 4 LRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEI 585
LR Q HPNIV GACM PPNLF+VMELC SLFDLLHN R +++V M ++V+ ++ +LH+R P IIHRDLKSLNLL+ G++G +KLCDFGLVRT T AGTP YMAPELL RPF++ VDVYA+G+LL E+F+ EIPF+G + +I +V G RP V CP I ++M CW +P RP EI
Sbjct: 31 LRQQ--HPNIVRFLGACMTPPNLFFVMELCDGSLFDLLHNHRFQYSEKQKVKMAMEVANAMNFLHTREPAIIHRDLKSLNLLM-GQDGQLKLCDFGLVRTKNTTAGTPCYMAPELLNNRPFSRKVDVYAYGVLLSELFTGEIPFRGCDPQEIISLVSRGQRPSVPTYDCPHPIRKMMQDCWHRDPGRRPEFSEI 221
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A7S2WD89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD89_9STRA) HSP 1 Score: 219 bits (559), Expect = 9.820e-68 Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEI 585
L+ SQL HPN+V GA M PPNL +VMELC +SL+D+LH R T E V + LDV+ +++YLHS P IIHRDLKS NLL+ + G VKLCDFGLVRT VT AGTPAYMAPELL + FNKSVDVY+FG+LL EIFS+EIPF Y+ DIR V G RP++ PP I ++ CW +P +RP G +
Sbjct: 112 LVMSQLDHPNVVSFLGASMSPPNLCFVMELCDQSLYDMLHVQRLQFTTYECVQIALDVAMAMEYLHSLQPCIIHRDLKSHNLLV--QRGVVKLCDFGLVRTRVTQAGTPAYMAPELLAGQAFNKSVDVYSFGVLLCEIFSQEIPFSSYDLDDIRRCVARGDRPRIPTIDTPPRIRDMISDCWQQDPSDRPIFGRL 304
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A1V9ZDZ5_9STRA (Serine/threonine protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDZ5_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.530e-66 Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEI 585
L+ S+L+HP++V+ GACM PNL +VMELC SLFD LH +G E V M V+ +++YLH++SP IIHRDLKS N+LL G VKLCDFGLV T T AGTPAYM PELL RPF+K+VDVY FG+LLWE+FSR++PF+GY+ DI+ V +G RP + CP L+ +CW P RP+ +
Sbjct: 61 LVMSKLKHPHVVNFIGACMEAPNLCFVMELCTMSLFDRLHRTNDALGVSELVDMATGVADAMRYLHAQSPAIIHRDLKSQNVLL-DHRGVVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMFGVLLWELFSRDVPFRGYDVDDIQRKVLAGDRPAIPTLDCPQKCQELIRQCWDNEPSRRPSFAAV 254
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A067CQ82_SAPPC (TKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ82_SAPPC) HSP 1 Score: 213 bits (542), Expect = 7.180e-66 Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEIESLTLEL 606
L+ S+L+HP+IVH GACM PNL +VMELC SLFD LH + E V M V+ ++ YLH++SP IIHRDLKS N+LL G VKLCDFGLV T T AGTPAYM PELL RPF+K+VDVY +G+LLWE+F+R++PF+GY+ DI+ V +G RP++ CP L+ CW +P RP+ I + E+
Sbjct: 61 LVMSKLQHPHIVHFIGACMEAPNLCFVMELCNMSLFDRLHRTNLALSVTELVEMATGVADAMMYLHAQSPAIIHRDLKSQNVLL-DMHGVVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMYGVLLWELFARDVPFRGYDVDDIQRKVLAGDRPQIPTLDCPQKCKELIRMCWDHDPARRPSFKTIHATLREI 261
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A6G0SI16_9STRA (Protein kinase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SI16_9STRA) HSP 1 Score: 213 bits (542), Expect = 7.850e-66 Identity = 105/195 (53.85%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEI 585
L+ S+LRHPN+V L GAC+ PPNL VMELC SL LLH + ++ + D++ +++LHSR P +IHRDLKS N+LL + G KLCDFGLV T T+AGTP+YM PELL +PF+KSVDV+ FGILLWEIFSR+IPF+GY+ASDI+ V +G R +V CP + LM +CW P RPT E+
Sbjct: 66 LVMSKLRHPNVVTLIGACLEPPNLCMVMELCDYSLHHLLHGTNTYLSPQQLTRIAGDIANGMRFLHSRKPAVIHRDLKSANVLLDAK-GVAKLCDFGLVHTKFTSAGTPSYMPPELLSGQPFSKSVDVFMFGILLWEIFSRDIPFRGYDASDIKRRVLAGERFRVPTVDCPHECQDLMRQCWDGEPSCRPTFEEV 259
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: G4ZW68_PHYSP (Protein kinase domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4ZW68_PHYSP) HSP 1 Score: 213 bits (541), Expect = 1.050e-65 Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEI 585
L+ S LRHPN+V L GAC+ PPNL VMELC SL LLH + ++ + DV+ +++LHSR P +IHRDLKS N+LL + G KLCDFGLVRT T AGTP+YM PELL +PF+KSVDV+ FGILLWEIFSR+IPF+GY+ SDI+ V G R +V CP + LM +CW P RPT E+
Sbjct: 64 LVMSILRHPNVVTLIGACLEPPNLCMVMELCDYSLHHLLHGTNTYLSPQQLTRIAGDVANGMRFLHSRKPAVIHRDLKSANVLLDAK-GVAKLCDFGLVRTKFTTAGTPSYMPPELLSGQPFSKSVDVFMFGILLWEIFSRDIPFRGYDVSDIKWRVLGGERFRVPTVDCPRECQELMKQCWDGEPSSRPTFEEV 257
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A8K1C3C7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C7_PYTOL) HSP 1 Score: 212 bits (540), Expect = 1.400e-65 Identity = 103/198 (52.02%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEIESL 594
L+ SQLRHPNIV L GAC+ PP + VMELC+ SL LH + + DV+ +++LHS SP +IHRDLKS N+LL ++G KLCDFGLVRT T AGTP+YM PELL +PF+K+VDVY FG+LLWEIF+R+IPF+G++ +DIR V +G R ++ CP + +LM RCW P RPT EI +
Sbjct: 61 LVMSQLRHPNIVSLIGACVEPPTMCMVMELCETSLHHALHVDNTFFSVQHSTRIAADVASVMRFLHSLSPAVIHRDLKSPNVLL-DKKGTAKLCDFGLVRTKTTTAGTPSYMPPELLSGKPFSKAVDVYMFGVLLWEIFARDIPFRGFDVADIRRKVLAGERFRIPTIDCPEECQKLMKRCWDAEPSRRPTFEEIHDI 257
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Match: A0A1W0A757_9STRA (Serine/threonine protein kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A757_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.160e-65 Identity = 101/202 (50.00%), Postives = 139/202 (68.81%), Query Frame = 1
Query: 1 LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTRERVAMVLDVSRSLKYLHSRSPPIIHRDLKSLNLLLAGEEGPVKLCDFGLVRTSVTAAGTPAYMAPELLQERPFNKSVDVYAFGILLWEIFSREIPFKGYEASDIREVVGSGGRPKVSRGFCPPDIARLMCRCWSPNPLERPTSGEIESLTLEL 606
L+ S+L HP++V GACM PNL +VMELC+ SLF+ LH I E VA+ V+ +++YLH+++P IIHRDLKS N+LL ++G VKLCDFGLV T T AGTPAYM PELL RPF+K+VD+Y +G+LLWEIF+R++PF+GY+ DI+ V +G RP + CP L+ +CW +P RP+ I + L++
Sbjct: 62 LVMSKLHHPHVVEFIGACMEAPNLCFVMELCRMSLFERLHRTNEQISLNELVAIATGVASAMQYLHAQTPVIIHRDLKSQNVLL-DKKGIVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDIYMYGVLLWEIFARDVPFRGYDVDDIQRKVLAGHRPTIPTIDCPAKCQELIRQCWDQDPSGRPSFKSIHASLLQI 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17531.4569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17531.4569.1 >prot_H-elongata_contig17531.4569.1 ID=prot_H-elongata_contig17531.4569.1|Name=mRNA_H-elongata_contig17531.4569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp LLRSQLRHPNIVHLYGACMVPPNLFYVMELCQRSLFDLLHNCRRDIGTREback to top mRNA from alignment at H-elongata_contig17531:1426..3243+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17531.4569.1 ID=mRNA_H-elongata_contig17531.4569.1|Name=mRNA_H-elongata_contig17531.4569.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1818bp|location=Sequence derived from alignment at H-elongata_contig17531:1426..3243+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17531:1426..3243+ >mRNA_H-elongata_contig17531.4569.1 ID=mRNA_H-elongata_contig17531.4569.1|Name=mRNA_H-elongata_contig17531.4569.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig17531:1426..3243+ (Himanthalia elongata Himel1 dioecious)back to top |