mRNA_H-elongata_contig17505.4558.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 542 bits (1396), Expect = 3.630e-178 Identity = 345/698 (49.43%), Postives = 396/698 (56.73%), Query Frame = 1
Query: 1 PLALAMSELYGDMWSSE------VGDDPRAESAESVLRALVKGNRWFAGHGQHDAHEALRSVLDLLHEELRRPVLGRFEPGYAALTAAIAA-----------------------------SSTQHPRTVTGSVNGDAQT--YPQPSPDNLDVSPCTPEAEGAWSENGDGNRGKEERSARRAVSEDRTSGAQRDVYWQSVAAETFQGMLLSRITCRACGRHSDQPDRFYDLSLPLLPAGAPATKTRAKPRSPPPNVAGNTALGAATAGCGD-----------------GSSASPMVESPGPEWEPTPXXXXXEERRGSGMAGTEGGDGESATGDRVAEWGAWRRNKGGWCMASGQRQQELDDXXXXXGREKGRGSAGAT-----SAAYVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAES---QSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPN---------SASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRKRQNSSGPQATRGSSLSTVTSTLTVTNAPTV----------SLLAAAGIGPAVEEARNVRSEIEFMAREMSKAAG--HRTP 1845
PLA AMS+LY +MWS E RAE+ V+RALVKGNRWFAG+GQHDAHEALRS+LDLLHEELRRPV FEPG+AALTAA+A S HP + DA T +P P TP A+G WS +G G+ G ERS R S D + AQRDVYWQS AAETFQG+LL RITCR CGRHSD PDRFYDLS+PLL A A + G +P VESP EWEP+ ++ G A + G GDR ++WG WRR +GGWC A+ DD RE + Y GL S+ VWLG SV+LEDC+ AFFS ERLRGANQYHCD CG KKEADK SLLHAPE+L+LHVKRFRRGY WSHKV+NRVVFPLHDLDVS WL++HA ES Q RA T SGGDAHRKSS+RR +A SPS S +PVLYDLVGLV+HTGGLEHGHYT YTRDDGS WYHFNDT T +VS+D V+SASPYIL+YRRKR +SS T+ S+ AP V SLLA+ GIGPA EEAR+VRS ++ MAREM+KAAG HR P
Sbjct: 112 PLAFAMSKLYSEMWSDEGXXXXXXXXXXRAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXXXXXSLLDDPSQNHHPSAQASAAATDAGTDKNKRPKQGGKATPPATP-ADGVWSASG-GDGGGNERSTERVASGDGAT-AQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEMTPTVESPRAEWEPS-----DDQHHGKAYAADQAPGG----GDRSSDWGGWRRTRGGWCSAT------RDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGT---SGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPS---SPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGA-------APAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPP 778
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 3.890e-174 Identity = 353/733 (48.16%), Postives = 406/733 (55.39%), Query Frame = 1
Query: 1 PLALAMSELYGDMWSSE------VGDDPRAESAESVLRALVKGNRWFAGHGQHDAHEALRSVLDLLHEELRRPVLGRFEPGYAALTAAIAA-------------------------------SSTQHPRTVTGSVNGDAQT--YPQPSPDNLDVSPCTPEAEGAWSENGDGNRGKEERSARRAVSEDRTSGAQRDVYWQSVAAETFQGMLLSRITCRACGRHSDQPDRFYDLSLPLLPAGAPATKTRAK--------------------PRSPPPNVAGNTALGAATAGCGDGSSASPMVESPGPEWEPTPXXXXXEERRGSG-----MAGTEGG-------------------DGESAT---GDRVAEWGAWRRNKGGWCMASGQRQQELDDXXXXXGREKGRGSAGATSAA--YVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEAD--KRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAES---QSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPN-------------SASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRKRQNSSGPQATRGSSLSTVTSTLTVTNAPTV----------SLLAAAGIGPAVEEARNVRSEIEFMAREMSKAAG--HRTP 1845
PLA AMS+LY +MWS E A + V+RALVKGNRWFAG+GQHDAHEALRS+LDLLHEELRRPV FEPG+AALTAA+A S HP + DA T + +P P TP A+G WS +G G ERS R S D + AQRDVYWQS AAETFQG+LL RITCR CGRHSD PDRFYDLS+PLL A A + A + +P +ESP EWEP+ E+R G G G GG DGES GDR ++WG WRR +GGWC A+ DD +GR S A Y GL S+ VWLG SV+LEDC+ AFFS ERLRGANQYHCD CG KKEA K SLLHAPE+L+LHVKRFRRGYFWSHKV+NRVVFPLHDLDVS WL++HA ES Q RAP T SGGDAHRKSS+RRG DG +A SPS S +PVLYDLVGLV+HTGGLEHGHYT YTRDDGS W+HFNDT T +VS++ V+SASPYIL+YRRKR +SS T+ S+ AP V SLLA+ GIGPA EEAR+VRS ++ MAREM+KAAG HR P
Sbjct: 71 PLAFAMSKLYSEMWSDEGXXXXXXXXXXXAATPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXTGPATASLLDGPSQNHHPSAQASAATTDAGTDKHKRPKQGGKATPPATP-ADGVWSASGGDGGGNNERSTERVASGD-GAAAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSVSATAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMTPTMESPRAEWEPS---DVSEKRTGLGGRSVTTLGLGGGAADEGXXXXXXXXXXXXGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRD-----DDDGPHDRDHEGRASXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGT---SGGDAHRKSSVRRGCAS----PDGXXXXXXXXXXXXXXXXXXSVAAAFSPS---SPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGA-------APAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPP 776
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A7S2RQP1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RQP1_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.230e-26 Identity = 79/253 (31.23%), Postives = 127/253 (50.20%), Query Frame = 1
Query: 910 ELDDXXXXXGREKGRGSAGATSAAYVRGLFFSVRVWLGINS--VSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYF-WSHKVYNR---VVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVT--PNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRKR 1644
+ DD + + GS+G+ + G+F +++ +G+ S +SL +C+Q FF+ E+L+G QY+C+ C SK++A+K S H PEVL L++KRF R WS Y V +PL +LD+S + + Q A + G G DG VN T S SS ++ LYDL +V+H+GG+ GHY Y ++ + WY ++D + + V S Y+L YR+++
Sbjct: 357 DADDLDRSGSQREHGGSSGS-----LWGVFKNIKTMIGLESQVLSLRECLQGFFAPEQLQGDEQYYCEKCKSKQDAEKSHSFAHLPEVLCLNLKRFNRNLGGWSLNSYKNMTSVTYPLRNLDLSDFFYDKYGSQQEEASLLG-------------------GAFNVDGLTVNNTHAQESTSSSPESREDDRTLYDLFAVVRHSGGINGGHYIAYCKNPINLKWYEYDDDICSVIPENKVQSDDAYLLFYRKQK 585
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A1V9XU25_9ACAR (Ubiquitinyl hydrolase 1 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XU25_9ACAR) HSP 1 Score: 123 bits (309), Expect = 2.510e-25 Identity = 70/203 (34.48%), Postives = 93/203 (45.81%), Query Frame = 1
Query: 1030 SVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRR 1638
SVSL DC+ AFFSA+ L+G N Y C C + K LL PEVL +H+KRFR +S K+ +RV FPL LD++P+ HA R VT LYDLV ++ H G GHYT Y +++ E WY F+DT+ +V VVA+ Y+L YR+
Sbjct: 582 SVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGIKYSKLLELPEVLCIHLKRFRHELLFSTKISSRVSFPLEGLDMAPFTHPHA-----RDEVT-------------------------------------------------LYDLVAVICHHGTASSGHYTSYAKNEYDEQWYEFDDTYVSKVDPSVVATCEAYVLFYRK 730
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A6G0UIR6_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UIR6_9BILA) HSP 1 Score: 122 bits (306), Expect = 4.390e-25 Identity = 134/553 (24.23%), Postives = 208/553 (37.61%), Query Frame = 1
Query: 1 PLALAMSELYGDMWSSEVGDDPRAESAESVLRALVKGNRW--FAGHGQHDAHEALRSVLDLLHEELRRPVLGRFEPGYAALTAAIAASSTQHPRTVTGSVNGDAQTYPQPSPDNL--DVSPCTPEAEGAWSENGDGNRGKEERSARRAVSEDRTSGAQRDV-YWQSVAAETFQGMLLSRITCRACGRHSDQPDRFYDLSLPLLPAGAPATKTRAKPRSPPPNVAGNTALGAATAGCGDGSSASPMVESPGPEWEPTPXXXXXEERRGSGMAGTEGGDGESATGDRVAEWGAWRRNKGGWCMASGQRQQELDDXXXXXGREKGRGSAGATSAAYVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTG-GLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRK 1641
P++ A EL +WS+ R + L + +R F G Q DA E +R LD+LH+ELR P +F + + + SS+Q +N + + + L D P+A S + + ER+ R+ SE T + DV + +S+ + F G L+S + C C S+ + F D+SL + P V + L + + SS+S ES E + E ++ M +A A W + W + S ++ + + + N +SLEDC+ AFFSA+ L G + Y C+ C + K+ L PE+L +H+KRFR ++ KV RV FPL+DLD+ P++ E P YDLV V H G G E GHY + R+D WY F+D+F + V S Y+L Y++K
Sbjct: 97 PVSDAFQELLMKIWSNH---QVRGNAIGPTLFSYRIKDRCAQFRGFTQQDAQEFIRCFLDILHQELRHPASIKFGSREVGNSLSSSCSSSQD------ELNLGENDHFETADSGLSSDAGDSKPDAPKKVSTSSPKPQSSPERA--RSPSESTTKSKKGDVQHSRSIITDVFDGELVSTVKCMTCHHLSNTRETFQDISLSI------------------PTVEQISLLREGSTIELESSSSSSEAESTVDESTGSVDMPSPESKKKQIMT--------TANQFSYAYWLIFFAKS--WLIDS-----------------------------WLNHIINAYKFMFSSN-ISLEDCLYAFFSADHLHGEDMYSCEKCSKLRNGVKQCRLTKLPEILCIHLKRFRHELLYNSKVGTRVTFPLYDLDMKPFVMHSVLEQAD------------------------------------------------PEEFSTEYDLVAFVSHRGAGAEFGHYVAFCRNDVDGNWYEFDDSFVSPIPEADVMSREAYVLFYQKK 532
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A2P6NT20_9EUKA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NT20_9EUKA) HSP 1 Score: 121 bits (304), Expect = 6.190e-25 Identity = 74/219 (33.79%), Postives = 114/219 (52.05%), Query Frame = 1
Query: 991 GLFFSVRVWLGINSVSLE--DCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRK 1641
G F ++ +LG+ +LE DC+ AF + E L G+NQY+C+ C +K + +K +L PE+L +HVKRFR ++S K+ + V FPL +L + + Q R G +A R+ +R+ + + GG+ V + + P SS YDL+ L+ HTGGL GHY Y + G E W ++D+ S V + YIL YRR+
Sbjct: 350 GFFSTITGFLGLTRRTLELRDCLHAFCAREYLYGSNQYNCEHCKAKTDGEKMFKILKLPEILCIHVKRFRYDSYFSSKLSDHVRFPLRNLSMETFCCSE----QERK-------GFEAFREEEIRKETAKK---AEKGGIEVDQSQVKIVREDPRSSGFTYDLIALINHTGGLGGGHYVSYCK--GEEEWNLYDDSRVSSASESQVENTEGYILFYRRQ 552
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A4U5NEF0_STECR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5NEF0_STECR) HSP 1 Score: 120 bits (300), Expect = 1.810e-24 Identity = 120/549 (21.86%), Postives = 200/549 (36.43%), Query Frame = 1
Query: 1 PLALAMSELYGDMWSSEVGDDPRAESAESVLRALVKGN-RWFAGHGQHDAHEALRSVLDLLHEELRRPVLGRFEPGYAALTAAIAASSTQHPRTVTGSVNGDAQTYPQPSPDNLDVSPCTPEAEGAWSENGDGNRGKEERSARRAVSEDRTSGAQRDVYWQSVAAETFQGMLLSRITCRACGRHSDQPDRFYDLSLPLLPAGAPATKTRAKPRSPPPNVAGNTALGAATAGCGDGSSASPMVESPGPEWEPTPXXXXXEERRGSGMAGTEGGDGESATGDRVAEWGAWRRNKGGWCMASGQRQQELDDXXXXXGREKGRGSAGATSAAYVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGG-LEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRRK 1641
P+A+++SEL MWS D+ + +VL ++ F G+ Q D+ E +R LDLLH EL+RP+ + E ++ AS + V + + + ++D E + S+N +SA SE G + + + S+ + F G L S + C +C S ++F DLSL + P +E +R+ E ++ W ++ G L + + ++G+F V +++SL+DC+++FFS + LRG + Y C+ C + K + PE+L +H+KRFR Y +S KV V FP+ DLD+S +L E+ S P YDL V H GG ++GHY Y R++ WY F+D+ R+ V + Y+L Y+++
Sbjct: 86 PVAISLSELIRAMWS----DEHKHFVGPNVLLTKIRTQCPQFRGYNQQDSQEFIRCFLDLLHNELKRPIYYKCEQDSVESRSSSEASEDSNMEEVFETADSGCSS-------DMD--------ETSQSDN---------KSAAEGGSE--PQGMPKVLSFTSLVEDVFNGELESSVKCLSCQTVSRTTEKFQDLSLSI-----------------------------------------PSIEDL----------------------------------ERLQESSTKENSEVPWDISMGSMVSMLT----------------WLAISPIQGMFSYVYNNFFSSAISLDDCLKSFFSPDHLRGDDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYVYSTKVSTSVTFPICDLDLSEFLCENVDLSSDLTPTE--------------------------------------------------YDLCAFVTHRGGGSDYGHYLAYCRNETDNNWYEFDDSTVTRIDAAEVLNKQAYVLFYQKR 463
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D) HSP 1 Score: 119 bits (299), Expect = 2.150e-24 Identity = 68/229 (29.69%), Postives = 102/229 (44.54%), Query Frame = 1
Query: 952 RGSAGATSAAYVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRR 1638
+ S AT+ ++ ++ +R WL +VSL C+ AFFSA+ L+G N Y C+ CG + K ++H PEVL++H+KRFR Y +S K+ V FPLH LD++P+L + S V YDL ++ H G GHYT Y ++ + WY F+D + VS + VA Y L Y++
Sbjct: 221 KASCDATTDGWLWWMWVWLRSWLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCT------------------------------------------------------SEVVTYDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 395
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: UPI001C70FF2F (ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 n=15 Tax=Penaeus TaxID=133894 RepID=UPI001C70FF2F) HSP 1 Score: 119 bits (299), Expect = 3.570e-24 Identity = 68/229 (29.69%), Postives = 102/229 (44.54%), Query Frame = 1
Query: 952 RGSAGATSAAYVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRR 1638
+ S AT+ ++ ++ +R WL +VSL C+ AFFSA+ L+G N Y C+ CG + K ++H PEVL++H+KRFR Y +S K+ V FPLH LD++P+L + S V YDL ++ H G GHYT Y ++ + WY F+D + VS + VA Y L Y++
Sbjct: 510 KASCDATTDGWLWWMWVWLRSWLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCT------------------------------------------------------SEVVTYDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 684
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Match: A0A7R9PPV7_TIMGE (Hypothetical protein n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9PPV7_TIMGE) HSP 1 Score: 114 bits (286), Expect = 3.760e-24 Identity = 68/219 (31.05%), Postives = 96/219 (43.84%), Query Frame = 1
Query: 982 YVRGLFFSVRVWLGINSVSLEDCMQAFFSAERLRGANQYHCDDCGSKKEADKRMSLLHAPEVLVLHVKRFRRGYFWSHKVYNRVVFPLHDLDVSPWLAEHAAESQSRAPVTGVGSGGDAHRKSSLRRGSYLGGSGTDGGGVNVTPNSASSPSDAPSSSPVLYDLVGLVQHTGGLEHGHYTCYTRDDGSEAWYHFNDTFTDRVSRDVVASASPYILIYRR 1638
+V L+ +R W +VSL DC+ AFFSA+ L+G N Y C+ C + K +L PEVL +H+KRFR +S K+ N V FPL LD+ P+L + VT YDLV ++ H G GHYTCY+ + SE W+ F+D + +VS + V + Y+L Y R
Sbjct: 163 WVTWLWEWIRSWFWGPTVSLHDCLAAFFSADELKGDNMYSCEKCNKLRNGVKYSKVLELPEVLCIHLKRFRHELMFSSKINNYVSFPLEGLDMRPYLHKDCVSQ-----VTS-------------------------------------------------YDLVSVICHHGTAGGGHYTCYSLNCISEQWFEFDDQYVTQVSPETVQNCEAYVLFYNR 327 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17505.4558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17505.4558.1 >prot_H-elongata_contig17505.4558.1 ID=prot_H-elongata_contig17505.4558.1|Name=mRNA_H-elongata_contig17505.4558.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=674bp MSELYGDMWSSEVGDDPRAESAESVLRALVKGNRWFAGHGQHDAHEALRSback to top mRNA from alignment at H-elongata_contig17505:2..5541- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17505.4558.1 ID=mRNA_H-elongata_contig17505.4558.1|Name=mRNA_H-elongata_contig17505.4558.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5540bp|location=Sequence derived from alignment at H-elongata_contig17505:2..5541- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17505:2..5541- >mRNA_H-elongata_contig17505.4558.1 ID=mRNA_H-elongata_contig17505.4558.1|Name=mRNA_H-elongata_contig17505.4558.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4044bp|location=Sequence derived from alignment at H-elongata_contig17505:2..5541- (Himanthalia elongata Himel1 dioecious)back to top |