mRNA_H-elongata_contig17439.4533.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: D8LBU6_ECTSI (Similarity to cobalamin synthesis protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU6_ECTSI) HSP 1 Score: 491 bits (1265), Expect = 1.470e-159 Identity = 333/647 (51.47%), Postives = 381/647 (58.89%), Query Frame = 2
Query: 197 MCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIR-------------RNSIARRATLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVG------------------------NESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARP-------------------HGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGE-LIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVSEWPTGAIRRSRLVFIGDLSPGIQEALRAGVHSCVASPRSRQPXXXXXXXXXXXXXXXXA-----FAARLGSVKFGGGHDDLFV 1951
MCIFCERA+ASLDDP AGL + V GW D + R S TL+QKR AE CEEL+RR RLPVTVITGFLGAGKTTFVNHLLS RHGR+LAVIENEFGEVA+DDALLG+GGVER E+ QVI+MPNGCMCCRVRGDLV+ALKRLI+++S S G DA T + D + + A AG + A + A +LDGIILECSGLDELAP+LQ A + V E E +LV SQLALSDRVLLNKSDLI+P +G AL AVK FPG++V RCERG+VD+D VLGV+SFSLDKALEMD+HFA++LAD+ + N H H H HDR+ AQSVG+E+ GPIDWTKF SWLK FLEKEGE LIWRLKGVLWT+ G AA TW WGAGRRTV+QGLYGHFESEVS+WP GA R SR+VFIGDLSP +QEALRAGV SCVA R+R PXXXXXXXXXXXXXXXX FA+RLG+VKFGGG +DLF+
Sbjct: 1 MCIFCERARASLDDPLAGL-------DGVGGWDADSSTXXXXXXXSSRFNRGPRGSREATLTLRQKREAERCEELKRRARLPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLIVSASERASL------------GDGDAPQQTQQEADKSXXXXXXXXXXXXXXXXXXXXXXXXEAAVARDTATAGGVEAAPAPAVAGAQLDGIILECSGLDELAPVLQG-----------------------------------------------NGDAKSSTPVEEGAEXXXXXXXXXXXXXXXXTLVKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGAAVTRCERGKVDVDLVLGVESFSLDKALEMDKHFADILADK----KKNSDKHDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGRDHRHAHDRLGAQSVGVEVAEGPIDWTKFTSWLKGFLEKEGEELIWRLKGVLWTTAAN-GSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLSPRVQEALRAGVRSCVAVRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGAVKFGGGGNDLFL 576
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A835ZKA2_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA2_9STRA) HSP 1 Score: 229 bits (583), Expect = 4.550e-61 Identity = 184/555 (33.15%), Postives = 242/555 (43.60%), Query Frame = 2
Query: 197 MCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIRRNSIARRATLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAG--------------------VRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLK-TFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVSEWPTGAIRRSRLVFIGDLSPGIQEALR 1798
MC FCERAK+ LDDP+ A ++ A ++ AE C LR R R PVTVI GFLG+GKTT +NH+L HG RLAV+ENE G VAVDD LL + +V++MPNGC+CCR RGDL +AL+RL V + LDGII+E SG E+AP+LQTFFAD FVQ ++LD+VVC+CD+PRL + L+ PQ Q + +SA VG A ++ ++ QLAL+D VLLNK+DL+ P+ AL A++ ++V C RG VD+ +L +FSL +A+ D F LA G V ++ G E G +D + W +WR+KGVLW G G A RR VLQG+ GH E E +WP G RRSR+V IG LS ++ LR
Sbjct: 1 MCQFCERAKSQLDDPYGASQSAP--------------------LSAAARME----AERCSALRSR-RTPVTVICGFLGSGKTTLLNHVLRAPHGLRLAVLENEVGAVAVDDELLSDA--REAALGPEVVLMPNGCLCCRTRGDLRDALRRL------------------------------------VERQQXXXXXXXXXXXXXXXXXXXXXXLLDGIIMELSGASEVAPVLQTFFADDFVQGALQLDSVVCVCDAPRLAQQLLPPQQQ------------------------RGDELSAEVGAAA--AAAHAITAEQLALADTVLLNKADLVDPDTLAALRASLSASMAAAAVTECVRGAVDVRRLLNTGAFSLSRAVAADDAF---LAGGSYGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGLRTAGAEHSRGAVDTARVVDWAHGVXXXXXAARVWRIKGVLWGDGAGGRGALA--------RRVVLQGVGGHVEVEEGDWPPGRPRRSRIVLIGPLSDELEAELR 455
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A812YTS9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YTS9_9DINO) HSP 1 Score: 206 bits (524), Expect = 1.230e-54 Identity = 177/552 (32.07%), Postives = 253/552 (45.83%), Query Frame = 2
Query: 197 MCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIRRNSIARRATLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLL-STRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFE-SEVSEWPTGAIRRSRLVFIGDLSP-GIQEALRAGVHSCVASPRSRQP 1843
MCIFCE+AK+ LD T QKR E C +L+ R R+ T++TGFLGAGKTTF+N +L S HGRR+AV++NEFG+V +DD L+ + + + IVMPNGC+CCRVRGDLV+AL+RL ADA T L A +S + KLD +++ECSGL E+ P+ QTFF+DPFVQ +LD+VVC+CD AA+F+ + V E A + A L+ QLA+SD LLNK DL+ + + + +++ P V C G+V++ VL V+SFSLD A+ +D HF AD HGD S+G+E+ A I+ + + WL++ +E+ G+ + RLKGVL G V+QG+ GH + S+ S+ SRLV IG +S G+++ L+ G + A+ + P
Sbjct: 1 MCIFCEKAKSELDGNL--------------------------------TAAQKREIESCVDLQER-RIRATILTGFLGAGKTTFLNFVLKSLGHGRRIAVVQNEFGKVPIDDQLM-----LLEKSAAETIVMPNGCLCCRVRGDLVDALRRL------------------------ADAPET---------------------LAAEASGGQ---KLDSLLIECSGLSEVLPVAQTFFSDPFVQASFKLDSVVCVCD-----------------------------AASFDQLEGGV------ASEGAAGADVAQLLREQLAISDVCLLNKCDLVDSAQRDQVSSRIREVNPAVRVVPCRHGKVNLAQVLQVNSFSLDGAISLDAHFLTSDAD--------------HGDXXXXXXXXXXXXXXXXXXXSAMSSLGLEI-AEAIERSALEDWLRSVVERLGQDLIRLKGVLRQH--------------GEASCLVVQGVGGHIDVSDASDLQPAT---SRLVIIGRVSDWGLRKELQDGFLALGAASAKQGP 399
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A812KQM6_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KQM6_9DINO) HSP 1 Score: 196 bits (499), Expect = 6.630e-49 Identity = 157/474 (33.12%), Postives = 221/474 (46.62%), Query Frame = 2
Query: 194 AMCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIRRNSIARRATLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLL-STRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRA--QSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVL 1606
AMCIFCE+AK LD T QKR E C +L+ R R+ T++TGFLGAGKTTF+N +L S HGRR+AV++NEFG+V +DD L+ + + + IVMPNGC+CCRVRGDLV+AL+RL ADA T L A +S + KLD +++ECSGL E+ P+ QTFF+DPFVQ +LD+VVC+CD AA+F+ + V E + + A L+ QLA+SD LLNK DL+ + + + +++ P V C G+V++ VL V+SFSLD A+ +D HF AD HGD + S+G+E+ A I+ + + WL++ +E+ G+ + RLKGVL
Sbjct: 325 AMCIFCEKAKGELDGNL--------------------------------TAAQKREIESCVDLQER-RIRATILTGFLGAGKTTFLNFVLKSLGHGRRIAVVQNEFGKVPIDDQLM-----LLEQSAAETIVMPNGCLCCRVRGDLVDALRRL------------------------ADAPET---------------------LAAEASGGQ---KLDSLLIECSGLSEVLPVAQTFFSDPFVQASFKLDSVVCVCD-----------------------------AASFDQLEGGV------ASEGSAGADVAQLLREQLAISDVCLLNKCDLVDSAQRDQVSSRIREVNPAVRVVPCRHGKVNLAQVLQVNSFSLDGAISLDAHFLTSDAD--------------HGDXXXXXXXXXXXXXXXXXXXXXSAMSSLGLEI-AEAIERSALEDWLRSVVERLGQDLIRLKGVL 662
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A7S4S2X6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2X6_9DINO) HSP 1 Score: 186 bits (472), Expect = 7.050e-49 Identity = 139/390 (35.64%), Postives = 183/390 (46.92%), Query Frame = 2
Query: 194 AMCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIRRNSIARRATLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLL-STRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAE 1360
AMCIFCERA N +A T QKR E CE LR R R+ T++TGFLGAGKTTF+N +L S HG+++ V++NEFG V+VDD L+ VE++ +V+VMPNGC+CCRVRGDLVEAL+RL G A AGA A + LDG+++ECSGL E+ P+ QTFFADP+VQ +LD V+C+CD+ G E +E VG S L+ QLA+SD LLNK DL+ + + V+ P V C G+V++ VL ++SFSL+ AL +D HF E
Sbjct: 22 AMCIFCERAA--------------------------------NDLAEGLTPSQKRQIEQCERLRER-RVRATILTGFLGAGKTTFLNFVLKSLGHGQKIGVVQNEFGIVSVDDQLML---VEKSEA--EVVVMPNGCLCCRVRGDLVEALRRLAQRRLPGADA--------------------------------------AGA---------AEVPLDGLLIECSGLSEVLPVAQTFFADPYVQASYQLDGVLCVCDA---------------------------------GNFEALEGNGKDVGTAGPEVSR--LLREQLAISDVCLLNKCDLVDSTQRDKIGTRVRAVNPAIKVVPCRHGKVNLGQVLKINSFSLESALSLDAHFLE 291
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A7S4LD08_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LD08_9EUGL) HSP 1 Score: 190 bits (482), Expect = 3.420e-48 Identity = 145/485 (29.90%), Postives = 223/485 (45.98%), Query Frame = 2
Query: 392 TRLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVS-EWPTGAIRRSRLVFIG-DLSPGIQEALRAGVHSCVASPRSRQ 1840
TR+PVTV+TGFLG+GKTT +NH+L+ HG++LA+IENEFGEV +DDALL + + ++I M NGC+CC VR DL++ LK+++ +AG +KLDGI++E +G+ + AP+ QTFF D V+ + RLD ++ + D+ + + L +P E A+N S + Q+A +DR+LLNK+DL+T E+ +EA +K + + RC + +V ++ VL + F L + LEMD F + + +H H V + +PH +V M L WL+ L +G I+R+KGVL S G+ + V QG++ F+ E EW R S+LVFIG DL EA++AG +C+ SP +++
Sbjct: 15 TRVPVTVLTGFLGSGKTTLLNHILTANHGKKLAIIENEFGEVGIDDALLAKN--TKVQADEEIIEMMNGCICCTVREDLIKVLKKMMKRMNAG------------------------------------------------------KLKLDGIVIETTGMADPAPVAQTFFVDEDVRGFARLDGIITMVDAKHIEQHL-----------DAEKP------------------------EGAENES-----VEQVAFADRILLNKTDLVTEEDLVRVEARLKSMNKFAPIVRCSKSQVSVENVLNIKGFDLKRTLEMDPEFLD-----------TDGEH-----VHDQTVTSLSILQPH--------NVHMSL---------LNEWLRDLLSTKGNDIYRMKGVLSIS--------------GSKEKFVFQGVHMIFDGEFEGEWGEDETRESKLVFIGKDLD---HEAIKAGFAACLDSPENQE 353
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A7S2L6U8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2L6U8_9DINO) HSP 1 Score: 188 bits (478), Expect = 6.610e-48 Identity = 152/495 (30.71%), Postives = 226/495 (45.66%), Query Frame = 2
Query: 341 TLQQKRAAEHCEELRRRTRLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVSE-WPTGAIRRSRLVFIG-DLSPGIQEALRAGVHSCV 1819
T++Q+ A E + ++ ++PVTVITGFLG+GKTT +N +L HG+R+AVIENEFGEV +DDALL G T E+ +I M NGC+CC VRGDL+ LKR++ SS + +D +++E +GL + AP+ QTFFAD FVQ+ + LD ++ + D+ L+ L E K E GV +A + Q+A +DR+LLNK+DL+ E +E ++ + +RRC EV +D++LG+ +FSLDK LEMD F + ++ADH+ HD R SVG+ + G +D K W+ L+++G I+R KGVL V G + V Q ++ F + W G + +L FIG +L+ +E L +G CV
Sbjct: 128 TVKQQSAEEAAKGPKKLEKIPVTVITGFLGSGKTTLMNRILKENHGKRIAVIENEFGEVGIDDALL-EAGPMTTEEN--IIEMNNGCICCTVRGDLIAGLKRMVKNSS------------------------------------------------------KTGKPIDAVLIETTGLADPAPVAQTFFADDFVQQKMALDGILTVADAKHLVAHL-------------DEEKPE------------------GVENEA---------VEQVAFADRILLNKTDLVDEAELDEVEKRIRRINEAAQIRRCRYSEVPMDFILGIQAFSLDKILEMDDAFLQ-----------DDADHQ--------------------HDD-RVSSVGIHIQ-GQVDQNKLNDWIGWLLKEKGVDIYRTKGVL--------------AVQGMKEKFVFQAVHMAFSGAPQKAWADGEEKVCKLTFIGKNLN---REELESGFKKCV 475
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A7S4G0K8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G0K8_9EUGL) HSP 1 Score: 189 bits (480), Expect = 7.540e-48 Identity = 145/485 (29.90%), Postives = 222/485 (45.77%), Query Frame = 2
Query: 392 TRLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVS-EWPTGAIRRSRLVFIG-DLSPGIQEALRAGVHSCVASPRSRQ 1840
TR+PVTV+TGFLG+GKTT +NH+L+ HG++LA+IENEFGEV +DDALL + + ++I M NGC+CC VR DL++ LK+++ +AG +KLDGI++E +G+ + AP+ QTFF D V+ + RLD ++ + D+ + + L +P E A+N S + Q+A +DR+LLNK+DL+T E+ +EA +K + + RC + +V ++ VL + F L + LEMD F + + +H H V + +PH +V M L WL+ L +G I+R+KGVL S G+ + V QG++ F+ E EW R S+LVFIG DL EA++AG +C+ SP + +
Sbjct: 15 TRVPVTVLTGFLGSGKTTLLNHILTANHGKKLAIIENEFGEVGIDDALLAKN--TKVQADEEIIEMMNGCICCTVREDLIKVLKKMMKRMNAG------------------------------------------------------KLKLDGIVIETTGMADPAPVAQTFFVDEDVRGFARLDGIITMVDAKHIEQHL-----------DAEKP------------------------EGAENES-----VEQVAFADRILLNKTDLVTEEDLVRVEARLKSMNKFAPIVRCSKSQVSVENVLNIKGFDLKRTLEMDPEFLD-----------TDGEH-----VHDQTVTSLSILQPH--------NVHMSL---------LNEWLRDLLSTKGNDIYRMKGVLSIS--------------GSKEKFVFQGVHMIFDGEFEGEWGEDETRESKLVFIGKDLD---HEAIKAGFAACLDSPENAE 353
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A2E1GIA7_9EURY (Cobalamin biosynthesis protein CobW n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2E1GIA7_9EURY) HSP 1 Score: 180 bits (457), Expect = 1.140e-46 Identity = 144/476 (30.25%), Postives = 212/476 (44.54%), Query Frame = 2
Query: 395 RLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPEEGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHFESEVSE-WPTGAIRRSRLVFIGDLSPGIQEALRAGVHSCV 1819
R+PVTV+TGFLGAGKTT +NH+L+ +HG+R+AVIENEFGEV +DDA++ + ++ M NGC+CC VRGDL+ L L+ R + D I++E +GL + AP+ QTFF D + +RLDA+V + D+ LL P + PP V +E QLA +DR++LNK DL+ E A+E+ +++ P + + R ++G++++D +L V +FSLD+ LE D F + A+ H HD + SVG+ELD G +D + WL L +G I+R KG+L S+ GW R V QG++ + + + W G RR+RLVFIG + +L AG SCV
Sbjct: 5 RVPVTVLTGFLGAGKTTLLNHILTEQHGKRIAVIENEFGEVGIDDAIVLDA-------EEEIFEMNNGCICCTVRGDLIRILGNLM----------------------------------------------------------RRKDRFDQILIETTGLADPAPVAQTFFVDDEMAAQLRLDAIVTVVDAKFLL-----PHLDEEKPPGVENEAVE-----------------------------------QLAFADRIVLNKIDLVDDSELDAVESRIREVNPLAPIVRTQQGKIELDAILEVGAFSLDRVLEDDPEFLDPDAE-------------------------------HQHD-LTVTSVGIELD-GDLDLDRLNDWLSDLLRTKGTDIFRSKGIL--SIAGWE------------ERYVFQGVHMLLDGQPNGVWGAGE-RRNRLVFIGRNLD--RASLEAGFKSCV 325
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Match: A0A7S2C7T9_9DINO (Hypothetical protein n=3 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C7T9_9DINO) HSP 1 Score: 183 bits (464), Expect = 6.280e-46 Identity = 143/479 (29.85%), Postives = 216/479 (45.09%), Query Frame = 2
Query: 395 RLPVTVITGFLGAGKTTFVNHLLSTRHGRRLAVIENEFGEVAVDDALLGNGGVERTRESHQVIVMPNGCMCCRVRGDLVEALKRLILTSSAGCSAPPPSEAAGVPSSGGADAMATTFEAKDVGNESSDQPQAEAGALGATSSDQRASIKLDGIILECSGLDELAPILQTFFADPFVQEYVRLDAVVCLCDSPRLLRMLVVPQSQPQPPPSVSEPKIEDCAATFNGVREEVETVSAGVGEKADNSSTASLVMSQLALSDRVLLNKSDLITPE-EGHALEAAVKDRFPGSSVRRCERGEVDIDYVLGVDSFSLDKALEMDQHFAEMLADRPAGVRINEADHRDHGDQHHHGVEEGAFARPHGHDRVRAQSVGMELDAGPIDWTKFKSWLKTFLEKEGELIWRLKGVLWTSVTGWGGHAAGTWVWGAGRRTVLQGLYGHF-ESEVSEWPTGAIRRSRLVFIG-DLSPGIQEALRAGVHSCVA 1822
++ VTV+TGFLG+GKTT +NH+L HG+R+AVIENEFGEV +DDAL+ G + + ++ M NGC+CC VRGDL+ LK+L+ S +++ LDGI++E +GL + AP+ QTFFAD +VQ++ RLD ++ L D+ +++ L + P V +E Q+A +DR+LLNK DL+ E E +E ++ G ++R +VD+D+V+G+ FSLDK + MD F E D H H HD R SVG+++ AG + K W+ L ++G ++R KGVL V G ++ V Q ++ F S+ W G RR ++VFIG +L+ +E L +G C+A
Sbjct: 157 KVAVTVLTGFLGSGKTTLLNHILEKNHGKRIAVIENEFGEVGIDDALVKGGAMA---DEENIVEMNNGCICCTVRGDLISGLKKLMKNS------------------------------------------------------KKSGKPLDGIMIETTGLADPAPVAQTFFADDYVQQHYRLDGILTLVDAKHIVQHL-----DDEKPEGVENEAVE-----------------------------------QVAFADRILLNKCDLVDSEKELEEVEQRIRAINAGVPIKRTTNSDVDMDFVMGIRGFSLDKIIAMDDAFLE--------------------DSH-----------DHQHDE-RVSSVGIDI-AGEVVQQKLNEWIGWLLREKGVDLFRSKGVL--------------AVKGMKQKFVFQAIHMLFANSQEGAWAEGEERRCKMVFIGKNLN---REELTSGFQKCLA 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17439.4533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17439.4533.1 >prot_H-elongata_contig17439.4533.1 ID=prot_H-elongata_contig17439.4533.1|Name=mRNA_H-elongata_contig17439.4533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=586bp MCIFCERAKASLDDPFAGLHIADETVEPVTGWRHDKAMIRRNSIARRATLback to top mRNA from alignment at H-elongata_contig17439:229..5810- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17439.4533.1 ID=mRNA_H-elongata_contig17439.4533.1|Name=mRNA_H-elongata_contig17439.4533.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5582bp|location=Sequence derived from alignment at H-elongata_contig17439:229..5810- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17439:229..5810- >mRNA_H-elongata_contig17439.4533.1 ID=mRNA_H-elongata_contig17439.4533.1|Name=mRNA_H-elongata_contig17439.4533.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3516bp|location=Sequence derived from alignment at H-elongata_contig17439:229..5810- (Himanthalia elongata Himel1 dioecious)back to top |