mRNA_H-elongata_contig17409.4524.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17409.4524.1
Unique NamemRNA_H-elongata_contig17409.4524.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: D7FX35_ECTSI (SKIP_SNW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX35_ECTSI)

HSP 1 Score: 587 bits (1513), Expect = 4.540e-205
Identity = 361/441 (81.86%), Postives = 378/441 (85.71%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQTRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXX------RVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR---GTERM 1299
            VKHDAIVKQGTNRDKIVY+QLSNIKE+RGD EKLQAPTADEEALTAERTRQAFEKLIGAKVTSATP SIG+QTRKEAEFIKYTPNP+APGYN+NAKQRVVRMVAAQVDPM+PPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLA+RAR+ERAG+        X                       XXXX        GDAR+G   XXXXXXXXXXXXX      RVAAEQRERLRAER      + R++NM+G MKKQKLDKE+DRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVY+PKTDDGDAWGDADQQ+    GTER 
Sbjct:  112 VKHDAIVKQGTNRDKIVYSQLSNIKEKRGDVEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPGSIGDQTRKEAEFIKYTPNPNAPGYNNNAKQRVVRMVAAQVDPMEPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLASRARLERAGIARGGAQDDX----------------------XXXXXGAPRPSGAGDARYGXXXXXXXXXXXXXXXXXMGDEERVAAEQRERLRAERKKDRERDLRIDNMRGGMKKQKLDKEKDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYKPKTDDGDAWGDADQQMSQLTGTERF 530          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A835ZBA7_9STRA (SKIP/SNW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA7_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 6.150e-148
Identity = 261/430 (60.70%), Postives = 299/430 (69.53%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ--TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKG-GGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR 1284
            VKHDAIVKQGTNRDK+V TQL+N+KE+ GD +KL  PT DEE  TAERTR A EK++G KVTSATPA +  Q    KEAEF++YTPNP+APG+N  AKQRV+RMV  Q DP++PPKHKHKKVPR P DDPVPVLHSPPRKVTV DQ AWKIPPC+SNWKNARGYTIPLDKRLAADGRGL E TVS NFATLSESLYIAERKAREETRLR +M K +A++EK+ KE +LR+LAARARMERAG+                                            G    G        XXXXXXXXRVAA+QRERLRAER      E R+E+MKGN KK K+  ER+RDISEKIALG  KG GGG GG  LYD+RLFNQSAGM                  +RGE   +YRP+  DGDA+GDA++Q++
Sbjct:  102 VKHDAIVKQGTNRDKLVQTQLNNVKEKAGDTDKLAVPTEDEEIATAERTRLALEKIVGVKVTSATPAGMISQQLATKEAEFVRYTPNPNAPGFNPAAKQRVIRMVEVQQDPLEPPKHKHKKVPRGPPDDPVPVLHSPPRKVTVADQAAWKIPPCISNWKNARGYTIPLDKRLAADGRGLVEATVSHNFATLSESLYIAERKAREETRLRADMTKALALKEKEAKEGELRELAARARMERAGISAPLAAAA------------------------------------GGGVQGEEGGVQGGXXXXXXXXRVAAQQRERLRAERKKDRERELRLESMKGNFKKGKV--ERERDISEKIALGQLKGTGGGAGGEGLYDSRLFNQSAGMSSGFGDESDYNLYSKPMLDRGEGAGIYRPRKSDGDAFGDAEEQMK 493          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A4D9DEX5_9STRA (SKIP_SNW domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEX5_9STRA)

HSP 1 Score: 345 bits (885), Expect = 2.010e-109
Identity = 209/428 (48.83%), Postives = 272/428 (63.55%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT-RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFG-----------GNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDG 1251
            V  DAIVKQGTNR+KIV+++LS+++    D   L  PT +EEA  A +T+ A E LIG K+ +A P  + +    +E  +++YTPNP+APGYN+NAKQRV+ +V AQVDPM+P KHKHKKVPR P +DPVPVLHSPPRKV+V+DQ+AWKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T++P FA L ++LYIAE KARE+   R ++ +++   E++QKE +LR+LAAR+RM RAG+                               VXXXXXXXXXX  G A  G           G               RVAA QR++LR ER      + R +NM+G M+K KLD++ +RDISEKIALGMH G     G ++YD+RLFNQ  G++                 ++G   S+YRP+ D G
Sbjct:   98 VNFDAIVKQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPVEVGGRREGEE------------------SVXXXXXXXXXXHYGRAWGGAGGVRERVEDVGEERGAEVGRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGAGSSIYRPRGDVG 507          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A812VBR9_SYMMI (Bx42 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VBR9_SYMMI)

HSP 1 Score: 332 bits (851), Expect = 8.720e-107
Identity = 219/399 (54.89%), Postives = 268/399 (67.17%), Query Frame = 1
Query:  103 LQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT--RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAE----RXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
            +Q P+ +EE  TA+ TR+A E L+  K+  A P+SI       +E ++I+YTPNP+APGYN+ AKQRV+RMV AQVDPM+PPKHK KKVPR     PVPVLHSPPR +TV+DQQ WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE T++  FA+ SESLYIAERKA E+ R+R ++ K++AMREK+ +E +LR+LA++ARMERAG+   XXXXXXXXXXXXXXX            +              D   G  R XXXXXXXXXX   V     E +  E    R      E R+ENMKG M+K K+D++ +RD+SEKIALGMH+G G   G  +YDARLFNQS GMD                 +R EA SVYRPK DD + +GD D Q+
Sbjct:    1 MQLPSTEEEEETADATRRALESLLDGKIKKAKPSSIASTPVDEEEPKYIRYTPNPNAPGYNAAAKQRVIRMVEAQVDPMEPPKHKIKKVPRGGGSPPVPVLHSPPRSLTVKDQQMWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEVTINNKFASFSESLYIAERKAAEDLRVRNQIRKKMAMREKEDREKELRELASKARMERAGVLGGXXXXXXXXXXXXXXXQRTRPDSDREDEDAGESI---------DGAVGSRRTXXXXXXXXXXTTSVEMSA-EIVTGEGEGGRRKEREREIRLENMKGTMRKNKIDRDMNRDVSEKIALGMHRGSGQLSGEAMYDARLFNQSGGMDSGFGGEDEYNTYSKPLFDRAEAASVYRPKRDDSEMYGDVDSQM 389          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S0STW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STW4_9STRA)

HSP 1 Score: 327 bits (837), Expect = 6.770e-105
Identity = 184/408 (45.10%), Postives = 246/408 (60.29%), Query Frame = 1
Query:   58 TQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQTRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
            T ++++KE+ G+ + L+ PT DE    AE+T+ A E ++  K+ S+ P  I      E  +I+YT NP+APG N  ++QRV++MV AQ+DPM+PPKHK KKVPR PA++PVPVLHSPPRK+TV DQQAWKIPPC+SNWKN++G+ IPLDKRLAADGRGLQE T++  FATLSE+LY+AERKA E+ R+R  + K++A++EK+ KE +LRD+A +AR+ERAG+                              E                                   R    +RE +R ER      E R+ENMKG ++K KL ++  RDISEKIALG+HKG G   G  L+D+RLFNQSAG+                  +R EA S+YRPK  D D +GD D Q+
Sbjct:   10 TTINDLKEKSGNIDSLKLPTDDEALKVAEKTKLALEAILHGKILSSKPLDITRSEDAEPTYIRYTSNPNAPGANGVSQQRVIKMVEAQIDPMEPPKHKIKKVPRGPAEEPVPVLHSPPRKLTVADQQAWKIPPCISNWKNSKGFIIPLDKRLAADGRGLQEVTINNKFATLSEALYVAERKASEDLRIRNTIRKKMAVQEKEDKEKELRDMATKARLERAGVLQGVTNPNNNDSYNKDLESGSDSDEEIPHNETEYE-------------------------------RAQRLERESIRVERRKERERELRLENMKGKLQKSKLGRDEGRDISEKIALGLHKGTGKLTGEALFDSRLFNQSAGLSSGFGPDDEYNTFTKPLFDRAEASSIYRPKKSDTDMYGDVDTQM 386          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: F0Y2K4_AURAN (SKIP_SNW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2K4_AURAN)

HSP 1 Score: 317 bits (813), Expect = 1.250e-99
Identity = 205/435 (47.13%), Postives = 263/435 (60.46%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVP----VLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAA--EQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
            VK+DAIVKQG N+ +IV T L ++KE+ G  + L  P+A+ EA  A+RT+ A   ++  K+ SA P  + E     R++A F++YTPNPSAPGY+++A QR+V++V  QVDPM PPKHKH K+PR P   PV     VLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ +FATL+E+LYIAER AR++ R R ++    A+REK+ +EA LRDLAA AR ERA L               XXXXXXXXXX                    D   GG                VAA   +RE++R ER      + R++N KG+MK+         D+SEK+ALG+ KG     G   +D RLFNQS+GMD                 +R +A ++YRP+  D   +GD D Q+
Sbjct:  103 VKYDAIVKQGENKGRIVQTSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQKATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPSPPVXXXXXVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAEALYIAERSARDDVRARAQIRNSNALREKEAQEARLRDLAASARDERAKLADRRGGAAAPRPRDDXXXXXXXXXX--------------------DELLGGGADEDPA---------VAAGRAEREQVRVERKRDRERQMRLDNAKGDMKRSXXXXXXXXDVSEKVALGLLKGTAKLAGEAQFDKRLFNQSSGMDSGFGDDGDYNVYSKPLLDREDATAIYRPREADAGKYGDGDAQL 508          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S3K114_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K114_9STRA)

HSP 1 Score: 317 bits (811), Expect = 2.790e-99
Identity = 202/428 (47.20%), Postives = 277/428 (64.72%), Query Frame = 1
Query:    7 KHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT--RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR 1284
            ++D++V+QG+NRDK VY  LS+IK  +G    L  PT  EE  TAE+TR A   ++ +K+ S+ P  + E     +++ F++YTPNP+APGY+++ KQR+V++V AQVDPM+PPK+KH KVPR P   PVP+LHSPPRK+T +DQ+AWKIPPC+SNWKNARGYTIPLDKRLAADGRGLQE+TV+ NFATL+E+LYIAER AREE R R ++ +  A++EK+ +EA LR+LA  AR +R+         XXXXXXXXXXXXXXXXXXXX                                       + A  +RE  R  R      + R++N KG+ K+ +L++ER+RD+SEK+ALG+ +G G   G   +D RLFNQ++G+D                 +R +A ++YRP+  +   +GDAD Q+R
Sbjct:   99 RYDSLVRQGSNRDKKVYASLSDIKSSQGSD--LALPTVQEEEKTAEKTRAALGAILTSKINSSKPTHVPEACDGNQKSSFVRYTPNPNAPGYSNDTKQRIVKLVQAQVDPMEPPKYKHTKVPRGPPSPPVPILHSPPRKLTAEDQEAWKIPPCISNWKNARGYTIPLDKRLAADGRGLQEHTVNDNFATLAEALYIAERSAREEVRARAQIRQTNALKEKEAQEARLRELAIAARQDRSQAAQLAATAXXXXXXXXXXXXXXXXXXXXA--------------------------------------QRARVEREEARITRKRERERQMRLDNAKGDTKRSRLERERERDVSEKVALGLLRGNGKLQGETQFDKRLFNQTSGLDQGLTQDDEYNIYTKPLMDRQDAAAIYRPRNTES-KYGDADAQLR 485          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A8J2S435_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S435_9STRA)

HSP 1 Score: 312 bits (799), Expect = 7.330e-98
Identity = 198/421 (47.03%), Postives = 249/421 (59.14%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERR-GDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRP-KTDDG 1251
            V++DAIVKQG N+++IV T L + K R  GD E L+ PT +E   TA+RT+QA   ++  KV S+ P  I EQ    +++A F++YTPNP+APGY + A QR+V++V  QVDPM+PPKHKH KVPR P   P PVLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ NFATL+E+LYIAER AR+E R R E+ +  A+R+K+ +EA LRDLAA+AR ER  L                                            G  R  G                    +R       XXXXXX  R++N KG+MK+ +L      D+SEK+ALG+ KG     G   +D RLFNQS+GMD                 +R +A ++YRP K DDG
Sbjct:   95 VRYDAIVKQGANKNRIVQTSLKDTKGRAVGDDEGLELPTEEEVQETAQRTQQALSVILDGKVNSSKPTHIPEQCDPNQQKATFVRYTPNPNAPGYTATAAQRIVKLVDQQVDPMEPPKHKHTKVPRGPPSPPAPVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNNFATLAEALYIAERSARDEVRARAEVRQANALRDKEAQEARLRDLAAQAREERNNLQASR----------------------------------------GAPRNDGAAAFFDGDSELLEEEDAGRRERXXXXXXXXXXXXXXMRLDNAKGDMKRSRLXXXXXXDVSEKVALGLLKGSAKLTGEAQFDKRLFNQSSGMDQGFGADDDYNVYSKPLLDREDAAAIYRPRKQDDG 475          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S3ZXS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXS4_9STRA)

HSP 1 Score: 312 bits (799), Expect = 7.540e-98
Identity = 198/421 (47.03%), Postives = 249/421 (59.14%), Query Frame = 1
Query:    4 VKHDAIVKQGTNRDKIVYTQLSNIKERR-GDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRP-KTDDG 1251
            V++DAIVKQG N+++IV T L + K R  GD E L+ PT +E   TA+RT+QA   ++  KV S+ P  I EQ    +++A F++YTPNP+APGY + A QR+V++V  QVDPM+PPKHKH KVPR P   P PVLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ NFATL+E+LYIAER AR+E R R E+ +  A+R+K+ +EA LRDLAA+AR ER  L                                            G  R  G                    +R       XXXXXX  R++N KG+MK+ +L      D+SEK+ALG+ KG     G   +D RLFNQS+GMD                 +R +A ++YRP K DDG
Sbjct:  152 VRYDAIVKQGANKNRIVQTSLKDTKGRAVGDDEGLELPTEEEVQETAQRTQQALSVILDGKVNSSKPTHIPEQCDPNQQKATFVRYTPNPNAPGYTATAAQRIVKLVDQQVDPMEPPKHKHTKVPRGPPSPPAPVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNNFATLAEALYIAERSARDEVRARAEVRQANALRDKEAQEARLRDLAAQAREERNNLQASR----------------------------------------GAPRNDGAAAFFDGDSELLEEEDAGRRERXXXXXXXXXXXXXXMRLDNAKGDMKRSRLXXXXXXDVSEKVALGLLKGSAKLTGEAQFDKRLFNQSSGMDQGFGADDDYNVYSKPLLDREDAAAIYRPRKQDDG 532          
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A1E7ETX5_9STRA (SKIP_SNW-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX5_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.870e-93
Identity = 200/391 (51.15%), Postives = 255/391 (65.22%), Query Frame = 1
Query:    1 QVKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATP---ASIGEQTRKEAE----FIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMD 1152
            ++ +DAIVK GTN DK VY++  +++     AE +  PT  EE  TA RT+ AF+KL+  K+    P   A +   T K  E    FIKYTP P APGYN  A QRV++MV AQVDPM PPKHKHKKVPR PADDPVP+LH+PP+K++ +++ +W +P C+SNWKN RGYTIPLDKRLAADGRGL+E+T++ NFATLSESLY+AER+AR+E RLR ++ K++ ++EKD++E +LR+LA +AR+ER+G+                                                 GG  XXXXXXXXXXX   VAA+QRER+    XXXXXX  R EN    +KK+KL+KERD  +SEKIALG+H G    GGA   D RLFNQSAGMD
Sbjct:   77 EISYDAIVKGGTNSDKKVYSRYEDLRGGEAKAEDIALPTEGEETETANRTQLAFQKLLNNKMALNKPSGSAMVNADTSKNIEEKTQFIKYTPRPDAPGYNPAAAQRVIQMVPAQVDPMMPPKHKHKKVPRGPADDPVPILHAPPQKLSKEERDSWNVPACISNWKNTRGYTIPLDKRLAADGRGLREHTINSNFATLSESLYVAERQARQEVRLRSQVQKKLTIQEKDRREIELRELANQARLERSGV-------------------------------------------------GGXXXXXXXXXXXXX---VAAKQRERMXXXXXXXXXXXLRQENNM-ELKKRKLEKERD--VSEKIALGVHTG---TGGAGEVDNRLFNQSAGMD 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX35_ECTSI4.540e-20581.86SKIP_SNW domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBA7_9STRA6.150e-14860.70SKIP/SNW domain-containing protein n=1 Tax=Tribone... [more]
A0A4D9DEX5_9STRA2.010e-10948.83SKIP_SNW domain-containing protein n=3 Tax=Monodop... [more]
A0A812VBR9_SYMMI8.720e-10754.89Bx42 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S0STW4_9STRA6.770e-10545.10Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
F0Y2K4_AURAN1.250e-9947.13SKIP_SNW domain-containing protein n=1 Tax=Aureoco... [more]
A0A7S3K114_9STRA2.790e-9947.20Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2S435_9STRA7.330e-9847.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZXS4_9STRA7.540e-9847.03Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A1E7ETX5_9STRA1.870e-9351.15SKIP_SNW-domain-containing protein n=1 Tax=Fragila... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17409contigH-elongata_contig17409:829..6903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score593.2
Seed ortholog evalue9.8e-167
Seed eggNOG ortholog2880.D7FX35
Preferred nameSNW1
KEGG koko:K06063
KEGG Pathwayko03040,ko04330,ko05169,ko05203,map03040,map04330,map05169,map05203
KEGG ModuleM00355
GOsGO:0000003,GO:0000122,GO:0000350,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000785,GO:0000974,GO:0001101,GO:0001700,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003714,GO:0003723,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006970,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0007276,GO:0007281,GO:0007399,GO:0007444,GO:0007517,GO:0007519,GO:0007610,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0008593,GO:0008630,GO:0009058,GO:0009059,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010228,GO:0010467,GO:0010468,GO:0010555,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010720,GO:0012501,GO:0014706,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016604,GO:0016607,GO:0017015,GO:0018130,GO:0018991,GO:0019098,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030511,GO:0030522,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033120,GO:0033554,GO:0033993,GO:0034399,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035214,GO:0035257,GO:0035258,GO:0035295,GO:0035556,GO:0035821,GO:0035914,GO:0036002,GO:0040011,GO:0040025,GO:0042221,GO:0042303,GO:0042752,GO:0042771,GO:0042809,GO:0042974,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0043902,GO:0043903,GO:0043921,GO:0043923,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045747,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046332,GO:0046483,GO:0046782,GO:0047484,GO:0048024,GO:0048026,GO:0048384,GO:0048385,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050434,GO:0050681,GO:0050684,GO:0050685,GO:0050767,GO:0050769,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051427,GO:0051569,GO:0051571,GO:0051702,GO:0051704,GO:0051716,GO:0051817,GO:0051851,GO:0051960,GO:0051962,GO:0052312,GO:0052472,GO:0060065,GO:0060255,GO:0060284,GO:0060429,GO:0060537,GO:0060538,GO:0061061,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0070562,GO:0070564,GO:0070887,GO:0071007,GO:0071013,GO:0071014,GO:0071141,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071704,GO:0071826,GO:0071840,GO:0072331,GO:0072332,GO:0080090,GO:0080134,GO:0090092,GO:0090100,GO:0090287,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097659,GO:0140110,GO:1901000,GO:1901002,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902584,GO:1902679,GO:1902680,GO:1903311,GO:1903313,GO:1903506,GO:1903507,GO:1903508,GO:1903844,GO:1903846,GO:1905269,GO:1990904,GO:2000026,GO:2000028,GO:2000070,GO:2000112,GO:2000113,GO:2000241,GO:2001141,GO:2001252
EggNOG free text desc.generation of catalytic spliceosome for second transesterification step
EggNOG OGsKOG2441@1,KOG2441@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons8
Model size1299
Cds size1299
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17409.4524.1prot_H-elongata_contig17409.4524.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17409 829..6903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930010.74509-CDS-H-elongata_contig17409:828..10151622930010.74509-CDS-H-elongata_contig17409:828..1015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 829..1015 -
1691679244.947492-CDS-H-elongata_contig17409:828..10151691679244.947492-CDS-H-elongata_contig17409:828..1015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 829..1015 -
1622930010.761635-CDS-H-elongata_contig17409:1659..17751622930010.761635-CDS-H-elongata_contig17409:1659..1775Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 1660..1775 -
1691679244.9658134-CDS-H-elongata_contig17409:1659..17751691679244.9658134-CDS-H-elongata_contig17409:1659..1775Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 1660..1775 -
1622930010.7767546-CDS-H-elongata_contig17409:2375..26431622930010.7767546-CDS-H-elongata_contig17409:2375..2643Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 2376..2643 -
1691679244.9762924-CDS-H-elongata_contig17409:2375..26431691679244.9762924-CDS-H-elongata_contig17409:2375..2643Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 2376..2643 -
1622930010.7937865-CDS-H-elongata_contig17409:3114..33151622930010.7937865-CDS-H-elongata_contig17409:3114..3315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 3115..3315 -
1691679244.9932551-CDS-H-elongata_contig17409:3114..33151691679244.9932551-CDS-H-elongata_contig17409:3114..3315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 3115..3315 -
1622930010.814053-CDS-H-elongata_contig17409:3885..39951622930010.814053-CDS-H-elongata_contig17409:3885..3995Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 3886..3995 -
1691679245.0038247-CDS-H-elongata_contig17409:3885..39951691679245.0038247-CDS-H-elongata_contig17409:3885..3995Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 3886..3995 -
1622930010.8258858-CDS-H-elongata_contig17409:5002..50981622930010.8258858-CDS-H-elongata_contig17409:5002..5098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 5003..5098 -
1691679245.0231583-CDS-H-elongata_contig17409:5002..50981691679245.0231583-CDS-H-elongata_contig17409:5002..5098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 5003..5098 -
1622930010.8402927-CDS-H-elongata_contig17409:5905..60581622930010.8402927-CDS-H-elongata_contig17409:5905..6058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 5906..6058 -
1691679245.0382679-CDS-H-elongata_contig17409:5905..60581691679245.0382679-CDS-H-elongata_contig17409:5905..6058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 5906..6058 -
1622930010.8569548-CDS-H-elongata_contig17409:6735..69031622930010.8569548-CDS-H-elongata_contig17409:6735..6903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 6736..6903 -
1691679245.0484433-CDS-H-elongata_contig17409:6735..69031691679245.0484433-CDS-H-elongata_contig17409:6735..6903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17409 6736..6903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17409.4524.1

>prot_H-elongata_contig17409.4524.1 ID=prot_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=433bp
QVKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERT
RQAFEKLIGAKVTSATPASIGEQTRKEAEFIKYTPNPSAPGYNSNAKQRV
VRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKI
PPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERK
AREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLGRGAGQQDE
DSDDEGAPRRARSQSAGPRRGEVSGRGQGHGHGEGGDARFGGNRGGGGGS
SALGEEERVAAEQRERLRAERKRDREREFRMENMKGNMKKQKLDKERDRD
ISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDSGFGAEDGYGVYSKPM
FNRGEAQSVYRPKTDDGDAWGDADQQVRGTERM
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mRNA from alignment at H-elongata_contig17409:829..6903-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17409.4524.1 ID=mRNA_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6075bp|location=Sequence derived from alignment at H-elongata_contig17409:829..6903- (Himanthalia elongata Himel1 dioecious)
CAGGTGAAGCACGACGCGATCGTGAAGCAAGGAACCAACCGAGATAAGAT TGTGTACACCCAGCTTTCCAACATCAAAGAGAGGAGAGGGGACGCGGAAA AGCTCCAGGCCCCCACGGCGGATGAGGAGGCGTTGACGGCGGAGCGTACC AGACAAGCTTTTGAAAAGGTGTGCAGGTGGTGTCGTATTGGCGTAGCTCC AGTCTATAGCTCTATAGGTCATTCGCCGGGTAGGTCATTAATGAGATTTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTT GAGGTGTTCGCGTTGCTTGCAGCATTGAGAGTGGTCATAGTCTACGTATT TCCTGGTGTCCTCGGTGGTCATAGTCTACCACCATAGGCGATATAGTCTA AATACACTGAATCAATTATTTTTCTAGATTTAGTTTACAGCTACGGCTAT ATACTAGTTATAATATAAGTATATATTAGCTGTAGTATAGCTTTCGTGTT TTGAAGGTCCTGAGCTTGCATATTTGAAAGGCCTAGGTATGACGACGGTG AACGTGTGGTCTTGGCGGGCTAAACAGCTTCGGTTTGGGTTTCCCCCCCC CACCTTACACCTACACCCATCATAGTCTAAAGCCTTGTTTCCGCCAAAGT GGTGAGAAGGGAAGGCGTGATCCTGTGAGCACGAGTGAGCAAGCCTGCCT TGGTTCTTAACAATGACGCTATTAAGCTGCCCACGCAGCAGTTACGCACA ATCCCCTCGCCCCCGCTGTGTAAACGCCCTCGGGGTTGCTTTACCGCTTC TCCCTGCTTCGCCGCTAACGCTCACACGCATGCACGCACTCGCAGCTCAT AGGCGCCAAGGTCACCTCGGCGACGCCGGCCTCAATCGGAGAACAGACGC GAAAGGAAGCCGAGTTCATCAAGTACACCCCGAACCCGAGCGCACCCGGC TACAACAGCAACGCAAAACAGAGGGTCGTGCGCATGGTCGCGGCGCAGGT ATGTTTCTGCGATCGTCGGCCGCGGTGCATGGGGGTCTCCAAGACGGGGT AAAGTAAAGACAGGAAAGAGGATAAAAGTTGTCCCGGGTGAACTCTCCTG CTCCTTCTCCTTCTCCTTTTGGTGTTGGTGTGCCGTAAACCTTGAAGTTT TGGTGGTGATTGTGCGTGGGATGCTGTAGCCCGGCACTTACCGTGATGAT ATGTGTTCAAAATGGTGGCCGGATTGTTGAGTTGACGAGGCGAAGATGTT TTATCTATCGTAATGAGATGCGGTGTTTGTGTGTGTGTATTTATTAAATT GCACATAACCGCGCAATCCGGCCCTGTCATGCTAGTCGTTCTAGGCTACT CTCGCATTGATCCTCCTCCCAATGGGGGATCAAACATATTTGCTACCTGG TACAAAACACCTCTATTAATGATCAGACGTGTCAAAGGAGACATACTATC GCTACATTTCGTATCTGTGTGTGTGCGTGTGTGTGTATTTGTTAAATTGC TCATAACCGCGCAATCCGGCTCTGTCATACTAGTCATTCTATAAAAGTCT ATTGCATGTAACATAACCCACCCGGGGGCTACTCTTTGTCGAGACAGATG TTATCTGGGGAGCTCCATTCAGCACGCATTCAGAAAATATTTCGTGCATT TTTTCCCTCTTAAATAATACGCTACGACTGCCTCTGACCTATGCCTGCCC CCCACCTCCCACCTTTTGCACGCCTCCGTTCCAAGCATGCAAACCCTTGA TTCTCGTTATTTGTAAACCAACCTACACTGCGTTCACCCTGCGGACATCT TACAGGTGGACCCCATGGATCCGCCGAAGCACAAGCACAAGAAAGTCCCG AGGGCTCCGGCGGACGACCCCGTGCCCGTGCTTCACTCTCCTCCCCGAAA GGTGCGCCGACGACTTTTAACTCTCCGGTCCGCTTTAAAAAAAGAAACAA AAATAAAAATCAGAAATAAATAACAAACGTAATGTGCATATTTTCGGCAG CGTGTAGGGTCTCCCGGTCCAGTTCCTGCTGAATAAAAATCGAAAGAAAA GTAAAAACAAAATACAGCGCGCATGTAATGTTCCTTAACACCACGTAACA CCGTCGATCGCTATTGGTATTGATATTGATCTTGGTCTTGTTTAGCACAT GAACCTTGCGCGCTGTTTTTTTTTAATATTTTGTTTTCGTAGCGTGTTTT ATTTATTTCTTACTGAAAGCCGTTTCTGCGCAAACGTGTCGCCCCTGTCA GTCTAACTATGATGTGTGTATGGGGGGAGGCGGGGGGAGGTAAGGATCAA CCGGATTTGGTTGCCTTTTTTCTGCTCGTGGTCACCTGAGGGGAGATTAT TTGCAAACCGGCGTGGTGCCCCCCCCTTACGTGTCTTGCCGGTTTGTGCG GTTTAATGCAAATTATTGATAAAAAGGGAAAGTGAATATCGACGTTTTGG GGGAATGCAAGAGGCCTTTGCCCCTCTTGCGGGGGTGTAGTGTAATCTTA CTCTTGTCGTTATTGATGATAGTATAGTGACATGATATCTCGAGAGCCGT TGCCGCGGAGGAATCGTGAATCGTGTCGACCGTTTTGTTTGTTTTAAAGA GGGGGGAAAGTGTTGCGAGCGGCCCAAGGGTCCCGTCTCTCCGTACAGTC CATTGTTTTTTTATTGTTTTTTTTTGCACTGTGCAAAGGACGAACACGAA ACAAGAAACACGTGCATGCGGGAGCGTAAAACGCTTTGGTCCCCATGCTT TGAAAAAAAAGAAATGCATGTAGCTCTCGTTCGAGTGTGGTAAAGGTGAC TTGCCCCTCCCTGCTGCCCTTTGTCGTCACGCGTGAGCCGAATGGACCAC TTTTGATGAAACGTTCGATGGATGGATTGTCGGGGGGGGGATGGATGCCC TACTACAGGTGACCGTGCAGGACCAGCAGGCTTGGAAAATCCCGCCCTGC GTATCCAATTGGAAAAACGCTCGCGGCTATACCATCCCGCTCGACAAGCG TCTCGCCGCAGACGGAAGGTGACTGGGGCCCGCGATGCTGCGCGCGGCTC TTTTGTGATAACTCGAGTGTCGTTTTTCATCGCTGTGGAGTTATTTTTGT TACAAGGTAGTTTTCGGGAGGCGTGTTCGATTTTTCGTGAGGAGGAAGTG GATGGGGGTTAAAATATGTGTAGCGAACGTTGGTGTTTTTTCTTAAAGAC TGGTGGGGAGGCGTTTTCCGTGGTTAGATCATGGCCGTTAATTGTCATTT CAATGACTTCAAAACCATGACGAGACAAATGTATTTTGTCGTTGTTGTGT CGAAAGCTTTTCACCGAGCGTTTGCGGCTACCTCTATTGATCTGGGGGTT ACGGCGTTACGTGTTACGGGAATACGGGGTTAGGGGATGAGGGGGTTGCC GACAGTTACCCGTCGCGGTGAGGCGCCCCCGTGTAAAACTTCGTGAGCGC GAAACATTTGACCCGCGTTTCGGGATGGAATCGTGTATACTTACTCTGAA AAAGAGTAGCTTAGCTTCCGCTACTTTCCAACCCTCCGCCCCTTTACCCC ACCCTCAAAAACGCCTCTGTACTATATTCCCTCCTCAGAGGCCTACAGGA GAACACCGTAAGCCCAAACTTCGCCACGCTGTCGGAGTCACTGTACATCG CCGAGAGAAAGGCTAGGGAGGAGACACGCCTGCGCGGTGAGATGCTGAAG CAGGTGGCTATGCGGGAAAAAGACCAGAAGGAGGCCGACCTGCGCGATCT TGCGGCGAGGGCGCGTATGGAGCGTGCGGGCTTGGGTCGGTAAGACTTGA ATCCGTCTATTATTTGACCCGATGCTCGATCGGAGTGGTGGGGGTTGGGG GGGGGGTAAGGGTAACATAAAATAGGGTTTGGTTCACGTAAAGAGGGATG TGTTTGTCAGGGTGTGATATTTTGTAGTTCCTCTAACCAGTAGGGTGGGG TAGAGTTCTCCAGTTCCAACGCTGTTTCTTTTAGTTCGTCCCGCTTGTCT CAAGTCCAAACCCTCGGGTATTACTCTCTTTATTTTACTATCCGGTGTAG TACTTGATAACGCCTCACTGCTGTTTCCGGGGCACGTCCATTTGAAATAC CTTTCATGTTCCCTATCAAATAGCTTCCAGTCGTAGTTTGAAGGGAATTG TCTTTCGGCTCTCTCCCGTATCGCAATGCTGCTTCCAAAACACACTGCTG ACGTGTGTTTGTTGGGTGTGTGTTTTGTGTCCGTCTCTTTTCTTTTTCCC GAACTAATAGTGGTGCCGGTCAACAAGACGAAGATTCGGACGACGAGGGC GCGCCGCGACGGGCAAGATCACAGTCGGCCGGGCCTAGAAGGGGTGAAGT TAGCGGTCGCGGTCAAGGTCACGGTCACGGTGAAGGAGGCGACGCTAGGT TCGGTGGAAATCGTGGAGGAGGCGGGGGCAGTAGTGCGTTGGGCGAGGAG GAGAGAGTGGCGGCGGAACAGCGTGAGCGCTTGCGGGCGGAGCGGAAGAG AGACCGGGAGAGGGAGTTCCGCATGGAGGTGAAGCGTTTTTCCCCCTCGA AGAAGGGGAGGGTAAAAAAGTACGCGTTCGGTAATTATAGGATTTAAAAT ATCACCACCACGACGATGACTTTACCGCTCGATTCGAATATTGTAATGTA TTGGTATTATTGTGTGTGTGGACTTCTGTTCGTATGGACTTGTTGGCGTT TTTAGGGCGGGAGAGAGGCTAGGCTTGCCTTCGCGGCGTAGCCTTTATGA TTTTGTAGTCGAAGACGGTATGTGTCGCGTAACCACCTATCTACCCACCG TCGGTTGCAAATTGTATTTTCTCCTCTCTGTTCGTTGTGGCTTCGATTTC GTTTCGTTTTGTTTTTGTTTTGTTTTTTGCTTCGCTTCATTTTGTTTCGT TTTGTTTCGTTTCGTCGATTTTGTGTTCTTTTCGCGTCTTTTGTTTCGTG TCGTTTTACTTCTCTAAGGCATATTAATATTAGCTCATTCAAACCCTCAC ATCGTTTCTTGGTTTCGTTTTTATTAAAAATAACCTTGAACTCATTAGAA TATTCTTTCAAGCATCTGAACTCACCTGGAAACTCTCCGAACATGTTTCG TTTCGTCTCGTTTGCAAACGGTTACCAGAACATGAAGGGGAATATGAAGA AGCAGAAGCTAGACAAAGAAAGAGACCGAGACATCTCGGAGAAGATCGCT CTGGGGATGCACAAGGGAGGAGGAGGCAAGGGAGGCGCAGACCTGTGAGA CGCTGCCGCCGCGTTGTTTTTCCCGTCCCGCCCTCAAACCATACTACTGA TAAAAAGTAGACAAAGAAACATGCGCGCCCTCCCGCCCCGCTGACCGACA GTCTCTAGGTGGCTTATCCCCGCGCGGTTCTTGTCTCTCTTTTCTTTCTT TCTCTTCGTTTTACAGTATATTAACCCCTGTGTAACCTTGATCTGTTTTT TACACATTAAATCCAATACAAAAATTGAAATCCAGTTCGTTAAAGGCTTG GTCGTGGCTTCATTTTGTTGTCGAAAAAAAACTCTATAGTAGGAACTCCC TGCTCTAAGCCTGTACCGTACCCCATTCACTCGTTGTACCGGTAACACGG TCAAGGTCAGTAAGGGGGAGAGAGTTGTGAGGGCAAGCCTTGATTCAGGG TAACGGTGTCTAGAGCCTATTTACTCTTACAGTGGGAGAGTGACGTCATA AAAATGTGTCACAACTCGGGCTAATAGGAGACACGACTACTACTAGTACT ACTCACTGGTTGTATCAGATACATCACTATTAATATTATACGTTGATCCG TATACCGGGTATGCGTATATTGACACACACACATGCATCCGCTTTTTATC GAAGTTAATATTATCTATATCTATGTATGATGTCATAGGTACGACGCCCG TCTGTTCAATCAATCGGCGGGAATGGATTCCGGTTTCGGTGCGGAGGATG GCTACGGCGTGTACTCCAAGCCCATGTTCAACCGTGGGGAAGCGCAGTCC GTTTACCGCCCCAAGACGGACGATGGCGACGCGTGGGGGGACGCCGACCA GCAGGTGAGGGGTACTGAAAGAATG
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Coding sequence (CDS) from alignment at H-elongata_contig17409:829..6903-

>mRNA_H-elongata_contig17409.4524.1 ID=mRNA_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2598bp|location=Sequence derived from alignment at H-elongata_contig17409:829..6903- (Himanthalia elongata Himel1 dioecious)
CAGGTGAAGCACGACGCGATCGTGAAGCAAGGAACCAACCGAGATAAGAT
TGTGTACACCCAGCTTTCCAACATCAAAGAGAGGAGAGGGGACGCGGAAA
AGCTCCAGGCCCCCACGGCGGATGAGGAGGCGTTGACGGCGGAGCGTACC
AGACAAGCTTTTGAAAAGCAGGTGAAGCACGACGCGATCGTGAAGCAAGG
AACCAACCGAGATAAGATTGTGTACACCCAGCTTTCCAACATCAAAGAGA
GGAGAGGGGACGCGGAAAAGCTCCAGGCCCCCACGGCGGATGAGGAGGCG
TTGACGGCGGAGCGTACCAGACAAGCTTTTGAAAAGCTCATAGGCGCCAA
GGTCACCTCGGCGACGCCGGCCTCAATCGGAGAACAGACGCGAAAGGAAG
CCGAGTTCATCAAGTACACCCCGAACCCGAGCGCACCCGGCTACAACAGC
AACGCAAAACAGAGGGTCGTGCGCATGGTCGCGGCGCAGCTCATAGGCGC
CAAGGTCACCTCGGCGACGCCGGCCTCAATCGGAGAACAGACGCGAAAGG
AAGCCGAGTTCATCAAGTACACCCCGAACCCGAGCGCACCCGGCTACAAC
AGCAACGCAAAACAGAGGGTCGTGCGCATGGTCGCGGCGCAGGTGGACCC
CATGGATCCGCCGAAGCACAAGCACAAGAAAGTCCCGAGGGCTCCGGCGG
ACGACCCCGTGCCCGTGCTTCACTCTCCTCCCCGAAAGGTGGACCCCATG
GATCCGCCGAAGCACAAGCACAAGAAAGTCCCGAGGGCTCCGGCGGACGA
CCCCGTGCCCGTGCTTCACTCTCCTCCCCGAAAGGTGACCGTGCAGGACC
AGCAGGCTTGGAAAATCCCGCCCTGCGTATCCAATTGGAAAAACGCTCGC
GGCTATACCATCCCGCTCGACAAGCGTCTCGCCGCAGACGGAAGGTGACC
GTGCAGGACCAGCAGGCTTGGAAAATCCCGCCCTGCGTATCCAATTGGAA
AAACGCTCGCGGCTATACCATCCCGCTCGACAAGCGTCTCGCCGCAGACG
GAAGAGGCCTACAGGAGAACACCGTAAGCCCAAACTTCGCCACGCTGTCG
GAGTCACTGTACATCGCCGAGAGAAAGGCTAGGGAGGAGACACGCCTGCG
CGGTGAGATGCTGAAGCAGGTGGCTATGCGGGAAAAAGACCAGAAGGAGG
CCGACCTGCGCGATCTTGCGGCGAGGGCGCGTATGGAGCGTGCGGGCTTG
GGTCGAGGCCTACAGGAGAACACCGTAAGCCCAAACTTCGCCACGCTGTC
GGAGTCACTGTACATCGCCGAGAGAAAGGCTAGGGAGGAGACACGCCTGC
GCGGTGAGATGCTGAAGCAGGTGGCTATGCGGGAAAAAGACCAGAAGGAG
GCCGACCTGCGCGATCTTGCGGCGAGGGCGCGTATGGAGCGTGCGGGCTT
GGGTCGTGGTGCCGGTCAACAAGACGAAGATTCGGACGACGAGGGCGCGC
CGCGACGGGCAAGATCACAGTCGGCCGGGCCTAGAAGGGGTGAAGTTAGC
GGTCGCGGTCAAGGTCACGGTCACGGTGAAGGAGGCGACGCTAGGTTCGG
TGGAAATCGTGGAGGAGGCGGGGGCAGTAGTGCGTTGGGCGAGGAGGAGA
GAGTGGCGGCGGAACAGCGTGAGCGCTTGCGGGCGGAGCGGAAGAGAGAC
CGGGAGAGGGAGTTCCGCATGGAGTGGTGCCGGTCAACAAGACGAAGATT
CGGACGACGAGGGCGCGCCGCGACGGGCAAGATCACAGTCGGCCGGGCCT
AGAAGGGGTGAAGTTAGCGGTCGCGGTCAAGGTCACGGTCACGGTGAAGG
AGGCGACGCTAGGTTCGGTGGAAATCGTGGAGGAGGCGGGGGCAGTAGTG
CGTTGGGCGAGGAGGAGAGAGTGGCGGCGGAACAGCGTGAGCGCTTGCGG
GCGGAGCGGAAGAGAGACCGGGAGAGGGAGTTCCGCATGGAGAACATGAA
GGGGAATATGAAGAAGCAGAAGCTAGACAAAGAAAGAGACCGAGACATCT
CGGAGAAGATCGCTCTGGGGATGCACAAGGGAGGAGGAGGCAAGGGAGGC
GCAGACCTAACATGAAGGGGAATATGAAGAAGCAGAAGCTAGACAAAGAA
AGAGACCGAGACATCTCGGAGAAGATCGCTCTGGGGATGCACAAGGGAGG
AGGAGGCAAGGGAGGCGCAGACCTGTACGACGCCCGTCTGTTCAATCAAT
CGGCGGGAATGGATTCCGGTTTCGGTGCGGAGGATGGCTACGGCGTGTAC
TCCAAGCCCATGTTCAACCGTGGGGAAGCGCAGTCCGTTTACCGCCCCAA
GACGGACGATGGCGACGCGTGGGGGGACGCCGACCAGCAGGTGAGGGGTA
CTGAAAGAATGGTACGACGCCCGTCTGTTCAATCAATCGGCGGGAATGGA
TTCCGGTTTCGGTGCGGAGGATGGCTACGGCGTGTACTCCAAGCCCATGT
TCAACCGTGGGGAAGCGCAGTCCGTTTACCGCCCCAAGACGGACGATGGC
GACGCGTGGGGGGACGCCGACCAGCAGGTGAGGGGTACTGAAAGAATG
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