mRNA_H-elongata_contig17357.4505.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17357.4505.1
Unique NamemRNA_H-elongata_contig17357.4505.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7G774_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G774_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 7.040e-129
Identity = 185/269 (68.77%), Postives = 213/269 (79.18%), Query Frame = 1
Query:    7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDP----IPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
            ML+G T +LG+GYWR+VRLATY GQ VA+KTL+  Q+ET RN ERHRWEAVALD V +HPNIVH+LGLC+CDM+TEYFP YMD LLM   +       +   E+IRMAL AARG+QALHE+P GPVVHADLQPRQLLLDE+GVVK+NDLNRCRFM RD+ G PCPF I+KGNGVWRSPEE+AGE  TEKLDIYS+G IFW+M GR+ PF+RDD  +YK  VL G RP + PSWH  FVQLF DMW  DP ERP A EVV RLE M  +L
Sbjct:    1 MLEGKTEFLGKGYWREVRLATYQGQDVAIKTLRDDQEETDRNKERHRWEAVALDLVSDHPNIVHLLGLCECDMITEYFPYYMDVLLMGDDSSSEELVELSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDENGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKPPFKRDD--KYKARVLRGERPKVDPSWHPEFVQLFTDMWKRDPRERPNAREVVLRLEMMYAQL 267          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 1.340e-127
Identity = 186/271 (68.63%), Postives = 213/271 (78.60%), Query Frame = 1
Query:    1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDP----IPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
            ++ML+G T +LG+GYWR+VRLATY GQ VA+K L+  Q+ET RN ERHRWEAVALD V +HPNIVH+LGLCDCDM+TEYFP YMD LLM   +       +   E+IRMAL AARG+QALHE+P GPVVHADLQPRQLLLD++GVVK+NDLNRCRFM RD+ G PCPF I+KGNGVWRSPEE+AGE  TEKLDIYS+G IFW+M GR+ PF RDD   YK  VL G RP + PSWH  FVQLF DMW  DP ERPTA EVV RLE M  EL
Sbjct:  125 EEMLEGKTAFLGKGYWREVRLATYQGQDVAIKMLREDQEETDRNRERHRWEAVALDMVSDHPNIVHLLGLCDCDMITEYFPYYMDVLLMGDDSSSEELVELSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDDNGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKPPFVRDDD--YKGKVLRGERPKVNPSWHPEFVQLFTDMWKRDPRERPTAREVVLRLEAMYAEL 393          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.180e-73
Identity = 125/265 (47.17%), Postives = 170/265 (64.15%), Query Frame = 1
Query:    1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLK--MTQDETRRNMER-HRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGN-GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
            ++M++G    +G G  RDV L    G+ + VK L+    Q  TR  +ER HRWEA A+DAV+ HPN+V +LG+C    V+EYFP+ +DDL++   A  PIP   V+ MALDAARGLQALHE P G ++H D++P+QL++D+ G +K+NDLN C F   DA+GN CP+  +    G WRSPE  AGE   EKLDIYS+ M+F+SM     P+    +      ++ G+ P   PSWH GF+ + +DMW  DP  RP+A  VVQRLE
Sbjct:  244 EEMMEGKKTLIGNGNIRDVYLVERGGRNLVVKYLREDFEQRATRTRVERIHRWEAAAIDAVRGHPNVVDMLGICGPSSVSEYFPVRLDDLVLKAGA-QPIPILTVVSMALDAARGLQALHEAPGGTIIHFDMKPQQLMVDDQGRLKINDLNMCSFPDTDADGNTCPYESSASRVGPWRSPENIAGEKLNEKLDIYSLAMVFYSMLALHPPYLNVPNATGN--IMEGIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 505          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LI06_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI06_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 2.470e-67
Identity = 119/263 (45.25%), Postives = 172/263 (65.40%), Query Frame = 1
Query:    7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQD--ETRRNMER-HRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINK-GNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
            ML    + +G    RDV L  + G+++ VK L+   +   +RR +++ HR EA ALD V+ HPNIV ++GLC+   V+E+ P  +DDL++   A  P+P   V+ MALDAARGLQALHE P G +VH+D++P+QL+LDE G VK+NDL+ CRF   D EGN CP+      +G +RSPE  AGEP +EK+D+YS+ M F++M   + P++ +   R +  +LAG+ P +  SW + FV++  DMW  DP  RP+A  VV+RLE
Sbjct:    1 MLADEKKLIGNRKIRDVYLVEWGGRKLVVKALREDFELKASRRRVDKIHRREAAALDEVRGHPNIVDMVGLCESSSVSEFVPGSLDDLVLKDGA-KPLPIALVVSMALDAARGLQALHEAPGGAIVHSDIKPQQLMLDEYGRVKINDLSMCRFPPADVEGNTCPYPARACKSGPFRSPENIAGEPLSEKIDVYSLAMTFYTMLALKPPYKGEPGARAR--ILAGIPPSVNLSWDRDFVEILGDMWQRDPKARPSARRVVERLE 260          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7G7W7_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W7_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.940e-61
Identity = 119/273 (43.59%), Postives = 165/273 (60.44%), Query Frame = 1
Query:    1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDET--RRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG--RDAEGNPCPFRINKGN--GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
            Q+ML G T  +G G  RDV L  Y G++VA+KTL+   D    R ++E+H+ E + LDA++ H NIV +LGLCD  +VTEY+       +  G  +  +PD  V+ MALDAARGLQALHE      +H DL+P+QLL+D+DG V LND N    M   +  +G  CP +  K N    W SPE +AGEP T   DIYS+ MIF+S+     P+E +     + +   G RP + PSWH+GF+++ QDMW   P +RP+A  VV RL+ +  E+
Sbjct:   21 QNMLAGNTTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDSRSQRVHLEKHKREILTLDAMRGHRNIVGMLGLCDTMVVTEYYTTSFLRAIFRGRME--LPDLAVVSMALDAARGLQALHETAGS--IHVDLKPQQLLIDDDGRVMLNDFNSAHIMSISQAGDGTACPAQSTKRNLPTPWPSPENYAGEPLTPASDIYSLAMIFFSLMAASLPYEGNPELLARAMSRQG-RPEIDPSWHKGFMKVVQDMWHQTPQKRPSAKRVVVRLQLLQAEI 288          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LHZ9_ECTSI (Serine/threonine-protein kinase pkn5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ9_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 9.970e-61
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1
Query:  172 VKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGN-GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFE--RDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
            V+ HPN+V ++G+C    V+EYF + +DDL++   A  P+P   V+ MALDAARGLQALHE P G +VH D++P+QL++D+ G +K+NDLN C F   DA+GN CP+       G WRSPE  AGE   EKLDIYS+ M+F+SM     P++  R+     KD    G+ P   PSWH GF+ + +DMW  DP  RP+A  VVQRLE
Sbjct:    5 VRGHPNVVDLVGICGPSSVSEYFAVRLDDLVLKAGA-QPLPILTVVSMALDAARGLQALHEAPGGAIVHFDMKPQQLMVDDQGRLKINDLNMCSFTDADADGNTCPYESTASRVGPWRSPENIAGENLNEKLDIYSLAMVFYSMLALHPPYQGVRNASGNIKD----GIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 206          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7FNX1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX1_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 3.270e-57
Identity = 112/272 (41.18%), Postives = 163/272 (59.93%), Query Frame = 1
Query:    7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRR---NMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDA--EGNPCPFRINKGNGV--WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
            ML G    +G G  R V +  Y G+ V VKTL+   +E RR   ++E HR E++ L+A++ HPN+V +LG C+  +VTEY P      +      + +    V+ +ALD A+G+QALHE+     +H D++P+QLL+D+ G  K+ND N    M  DA  +G  CP    +   +  WR+PE  AG+P TEK+DIY+MGMI++S+     PF   D + + +   A  RP + PSWH+GFV++ QDMW  DP ERP A +VVQRL+ +  EL
Sbjct:  100 MLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHV-EELRRLKAHLEMHRVESLTLEALRGHPNVVGMLGFCNTTVVTEYHPDNFLHTIFRKK--EKLSLRRVVSLALDVAQGMQALHEI--AGAIHLDMKPQQLLIDDAGRGKVNDFNSVHLMSADASADGKHCPILTGRPARLVPWRAPENIAGKPVTEKVDIYAMGMIYYSLVSGGLPFP--DVETFDEARAAHERPEIDPSWHKGFVEIIQDMWHEDPDERPFARQVVQRLQALQDEL 364          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5K7R0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R0_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.690e-56
Identity = 115/273 (42.12%), Postives = 161/273 (58.97%), Query Frame = 1
Query:    1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNME--RHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG--RDAEGNPCPFRINKGN--GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
            Q ML G    +G G  RDV L  Y G++VA+KTL+   D   + +   +H+ E + LDA++ H NIV +LG CD  +VTEY+       +  G  +  +PD  V+ MALDAARGLQALHE+     +H DL+P+QLL+D+DG V LND N    M   +  +G  CP +  K N    W SPE +AGEP T   DIYS+ MIF+S+     P+E +  +  + +   G RP + PSWH+GF+++ QDMW   P  RP+A  VV RL+ +  E+
Sbjct:  163 QRMLAGNKTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDGRSKKVHLMKHKREILTLDAMRGHRNIVGMLGFCDTMVVTEYYTTSFLRAIFRGRIE--LPDLAVVSMALDAARGLQALHEIASS--IHVDLKPQQLLMDDDGRVMLNDFNSALLMSVSQAGDGTACPAQSAKRNLPTPWPSPENYAGEPLTPANDIYSLAMIFYSLMAGSLPYEGNPERLARAMSSQG-RPEIDPSWHKGFMKVVQDMWNQTPQRRPSAERVVVRLQLVQAEI 430          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 5.460e-56
Identity = 106/257 (41.25%), Postives = 154/257 (59.92%), Query Frame = 1
Query:   31 LGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRN---MERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGV----WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRL 780
            L  G  RDV L  Y GQ + VKTL+   DE R+    +  H+ E + +DA+K HPNIV +LG+C   +VT++F       +    A  P+P  +V+ +AL AA+GLQALHE+  G  +H D++P+QLL+D+DG   +ND N  + MGR    +     ++ G       WR PE +AG+P TEK DIYSMGMIF+S+   + P+  D  +  +  V  G +P + PSWH+GF+++ + MW  DP  RP+A +VV RL
Sbjct:    9 LASGLVRDVYLVEYEGQALVVKTLRNV-DELRKQKLYLTMHKREVLTMDALKGHPNIVEMLGVCGTTVVTKFFKEDFKGSIRRRGA--PMPIRQVVSLALGAAKGLQALHEIVGG--IHFDMKPQQLLIDDDGTAVINDFNALKLMGRSPGPDEAFCAVHGGTPAQLITWRPPENYAGKPLTEKADIYSMGMIFYSVIAGRNPY--DTPEALQTAVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRL 258          
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7FYC9_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC9_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 8.990e-56
Identity = 115/267 (43.07%), Postives = 156/267 (58.43%), Query Frame = 1
Query:    7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRW-----EAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG-RDAEGNPCPFRINKGNGV--WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
            ML+G    +G G  RDV L  Y GQ V VK+L+   D    N+E+HR      E + LDA++ + NIV +LG+C   +VTEYFP  +  +     + + +  + V+ M+LDAARGLQALHEV     VH DL+P QLL+D++  V +ND N    MG    +G  CP R  K N +  W SPE +AG+P TE  DIYSM M+F+S+     PF   +            RP + PSWH+G+VQ+ QDMW  DPM RP+A ++V RLE
Sbjct:  111 MLEGKKTLVGSGSVRDVFLVEYEGQTVVVKSLRRKDDP---NVEKHRLVMHKLEVLTLDALRGNRNIVGMLGVCGTTVVTEYFPTNV--VYYAFQSRERLSIHAVVSMSLDAARGLQALHEVG---CVHVDLKPMQLLVDDNRRVMVNDFNSVHVMGISPTDGAFCPVRAKKRNRLEAWPSPENYAGQPLTETSDIYSMAMVFYSLLSGTPPFGGPEGLAEAFATRTQPRPLVDPSWHRGYVQIVQDMWNEDPMRRPSARQIVARLE 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G774_ECTSI7.040e-12968.77Similar to TAK1 (TGF-beta-activated kinase) n=1 Ta... [more]
A0A6H5JFK2_9PHAE1.340e-12768.63Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5J7B7_9PHAE2.180e-7347.17Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LI06_ECTSI2.470e-6745.25Similar to TAK1 (TGF-beta-activated kinase) n=1 Ta... [more]
D7G7W7_ECTSI1.940e-6143.59Similar to TAK1 (TGF-beta-activated kinase) n=1 Ta... [more]
D8LHZ9_ECTSI9.970e-6148.79Serine/threonine-protein kinase pkn5 n=1 Tax=Ectoc... [more]
D7FNX1_ECTSI3.270e-5741.18Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A6H5K7R0_9PHAE1.690e-5642.12Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LN73_ECTSI5.460e-5641.25Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpu... [more]
D7FYC9_ECTSI8.990e-5643.07Similar to TAK1 (TGF-beta-activated kinase) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17357contigH-elongata_contig17357:3319..5579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.8
Seed ortholog evalue1.3e-50
Seed eggNOG ortholog2880.D7FNX1
KEGG koko:K04427
KEGG Pathwayko04010,ko04013,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.25
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionsimilar to TAK1 (TGF-beta-activated kinase)
Ec32 orthologEc-01_010790.1
Exons4
Model size1595
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17357.4505.1prot_H-elongata_contig17357.4505.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17357 4053..5573 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.9532444-UTR-H-elongata_contig17357:3318..40521622930008.9532444-UTR-H-elongata_contig17357:3318..4052Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17357 3319..4052 -
1691679244.091271-UTR-H-elongata_contig17357:3318..40521691679244.091271-UTR-H-elongata_contig17357:3318..4052Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17357 3319..4052 -
1622930009.0106864-UTR-H-elongata_contig17357:5573..55791622930009.0106864-UTR-H-elongata_contig17357:5573..5579Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17357 5574..5579 -
1691679244.137001-UTR-H-elongata_contig17357:5573..55791691679244.137001-UTR-H-elongata_contig17357:5573..5579Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17357 5574..5579 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.9691966-CDS-H-elongata_contig17357:4052..42021622930008.9691966-CDS-H-elongata_contig17357:4052..4202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4053..4202 -
1691679244.101345-CDS-H-elongata_contig17357:4052..42021691679244.101345-CDS-H-elongata_contig17357:4052..4202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4053..4202 -
1622930008.97909-CDS-H-elongata_contig17357:4356..45211622930008.97909-CDS-H-elongata_contig17357:4356..4521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4357..4521 -
1691679244.108637-CDS-H-elongata_contig17357:4356..45211691679244.108637-CDS-H-elongata_contig17357:4356..4521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4357..4521 -
1622930008.990701-CDS-H-elongata_contig17357:4751..51261622930008.990701-CDS-H-elongata_contig17357:4751..5126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4752..5126 -
1691679244.116203-CDS-H-elongata_contig17357:4751..51261691679244.116203-CDS-H-elongata_contig17357:4751..5126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 4752..5126 -
1622930009.0012484-CDS-H-elongata_contig17357:5408..55731622930009.0012484-CDS-H-elongata_contig17357:5408..5573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 5409..5573 -
1691679244.1277535-CDS-H-elongata_contig17357:5408..55731691679244.1277535-CDS-H-elongata_contig17357:5408..5573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17357 5409..5573 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17357.4505.1

>prot_H-elongata_contig17357.4505.1 ID=prot_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEA
VALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEV
IRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRF
MGRDAEGNPCPFRINKGNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFG
RQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPT
AAEVVQRLEEMLTELEGTQRTRQRRAAVSDSCSS*
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mRNA from alignment at H-elongata_contig17357:3319..5579-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17357.4505.1 ID=mRNA_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2261bp|location=Sequence derived from alignment at H-elongata_contig17357:3319..5579- (Himanthalia elongata Himel1 dioecious)
CAGGATATGCTAGATGGCCCCACGAGGTACTTGGGTCAGGGTTACTGGAG AGACGTTCGCCTGGCCACCTATAACGGCCAGCAAGTTGCTGTGAAAACCC TCAAGATGACGCAAGATGAGACCCGGCGGAACATGGAACGGCATCGGTGG GAGGCGGTGGCGCTTGATGCGGTGAGAATTGACATCGAAATGCCTTAGTC ATTAGGAGACCCTCCTGTGTTATTTGGATGTATGGTATGAAGGATAATGT GGACGATGACGTTGACGTCTGCGAGGAGGTTTCGTAGTCTGGCAAGATTT AGCAACACAGAACTATGATTAGCTACTCACACCGCGCTTTACAGACGTAT GTCGGTTTTGTTTCAGGTGTTGACGGCAATATAGAGCTCGCTCGGTAAAC CACAACGACGGCGTTGTGCCCCTCTCGCCGTGCGACTGCGCTGCGTTCCA TAGGTGAAGAATCATCCCAACATCGTCCACATCCTCGGCCTCTGCGACTG CGACATGGTGACGGAGTACTTCCCCATCTACATGGACGATTTGCTGATGA ACGGTCCCGCCGACGACCCGATTCCCGACAACGAGGTCATTCGGATGGCG CTCGACGCTGCCCGTGGCCTGCAAGCGTTGCACGAAGTGCCCGAAGGTCC CGTCGTGCACGCCGACTTGCAGCCGCGGCAGCTCTTACTGGACGAGGACG GGGTGGTCAAGCTGAATGATCTCAACCGTTGCCGGTTTATGGGCCGGGAC GCGGAGGGGAACCCTTGCCCCTTTAGGATCAACAAGGGGAACGGCGTGTG GAGGTCTCCTGAAGAGTTCGCAGGGGAGGTGAGGCCCCGAAAAACGAAAT GATGTAGTGATGTCACCCTGGCAAGCGCCGATAGCCAATCGACGACAAGC TTGTCGAAGCTATTAATACTACCAAGGCCTGCTGTAAGTTGTGCGGTATG TGCAATGCAAACGGTGCGCGGCAGAGGGCGGCGAATGGATGCTGCTAACC TCCGGCATGCTTTCAATCTACTCTGCGGACTGTCCCACCCGATGTCTTTC GACGGCAGCCTCAGACGGAGAAGCTCGACATCTACAGCATGGGTATGATA TTCTGGTCCATGTTCGGGAGACAGGCACCCTTCGAGCGGGATGATCACCA GCGTTACAAGGATTTGGTGTTAGCCGGGGTTCGTCCTTTCCTCAAGCCTT CCTGGCACCAGGGTTTCGTTCAGGTGGGGGACGATTTGGTAGATGACTTT GATGCTGTAAGCAAGAGTATTAAGCGAACGGTGGCATCGATCGGTCCTTG CAACAACCTTTACCCACAAAAGCGATAAAACCTATCACCGTTGTTGAACC CGTCCTCCACCGTCCACCGTCGCGAAGCTCTTCCAAGACATGTGGGCGGG GGATCCCATGGAGAGACCGACTGCTGCTGAGGTTGTTCAGCGCTTGGAGG AAATGCTGACAGAATTGGAGGGGACACAACGAACTCGACAACGAAGGGCA GCCGTCAGCGACAGCTGTTCCTCTTAAGACGATAACTGAGAAAAAATGCA GCGTAGCCAGCTACCGTAGGTCGGAATTTGCGTGAATATACGGAAACTCA AAATTTACGGTAATTACGATCACGTCTATTTAAGGCAGACACAGCACGTT GAATGAATGCCCTTTAAGCATTGTTGGGCACCATTATACAGCACGGGGAA TCTGCTCGACCAAATTCGAGTCAAAACTCCACAACGCGCACCGACGCCGG GCGCCGTTTTGCACGTGCTATGTTTTATGTGTTGCTTGTATCGAGAGGTA CATATGTGTGGATGGGAGTGTATCGTTTTTTTAGTTTAAGGGTGGAGTGG CGATTAGTTGAAGTTGGCGTGTGGCTGCTCCTCTTTCCCAGCGACGATAC ACTTGATTCCGTAGGTTTCCGTAAGCTCGTCGATATGTGTGTATTCGTGT ATGCAAAGGTTGTTTCATTGTCTAGGTAGCTGCTATACGGCTGCGTTACG TGGAGTCCATATGCGCGTGTCATTACGATACGCTGCGCCGAGCCCACCTC AGCTTCCTGACTCGCTGCATCGGATGGCGAAATAATAATCGCACTTGACT ACTCGATCTAATAACTAGATACCCTCATTAACACGGGAAGTGAGAAAATC GAGGCGATTACGCGCAGGAGGCGGATTCTGTTCGCGGGATTCGTGGCGCA CATGGAGGATACGAAACTGCCAAAGTTCGTTATCCCCAAAGAACTCATGA GGAGCACGGGC
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Coding sequence (CDS) from alignment at H-elongata_contig17357:3319..5579-

>mRNA_H-elongata_contig17357.4505.1 ID=mRNA_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig17357:3319..5579- (Himanthalia elongata Himel1 dioecious)
ATGCTAGATGGCCCCACGAGGTACTTGGGTCAGGGTTACTGGAGAGACGT
TCGCCTGGCCACCTATAACGGCCAGCAAGTTGCTGTGAAAACCCTCAAGA
TGACGCAAGATGAGACCCGGCGGAACATGGAACGGCATCGGTGGGAGGCG
GTGGCGCTTGATGCGATGCTAGATGGCCCCACGAGGTACTTGGGTCAGGG
TTACTGGAGAGACGTTCGCCTGGCCACCTATAACGGCCAGCAAGTTGCTG
TGAAAACCCTCAAGATGACGCAAGATGAGACCCGGCGGAACATGGAACGG
CATCGGTGGGAGGCGGTGGCGCTTGATGCGGTGAAGAATCATCCCAACAT
CGTCCACATCCTCGGCCTCTGCGACTGCGACATGGTGACGGAGTACTTCC
CCATCTACATGGACGATTTGCTGATGAACGGTCCCGCCGACGACCCGATT
CCCGACAACGAGGTCATTCGGATGGCGCTCGACGCTGCCCGTGGCCTGCA
AGCGTTGCACGAAGTGCCCGAAGGTCCCGTCGTGCACGCCGACTTGCAGC
CGCGGCAGCTCTTACTGGACGAGGACGGGGTGGTCAAGCTGAATGATCTC
AACCGTTGCCGGTTTATGGGCCGGGACGCGGAGGGGAACCCTTGCCCCTT
TAGGATCAACAAGGGGAACGGCGTGTGGAGGTCTCCTGAAGAGTTCGCAG
GGGAGGTGAAGAATCATCCCAACATCGTCCACATCCTCGGCCTCTGCGAC
TGCGACATGGTGACGGAGTACTTCCCCATCTACATGGACGATTTGCTGAT
GAACGGTCCCGCCGACGACCCGATTCCCGACAACGAGGTCATTCGGATGG
CGCTCGACGCTGCCCGTGGCCTGCAAGCGTTGCACGAAGTGCCCGAAGGT
CCCGTCGTGCACGCCGACTTGCAGCCGCGGCAGCTCTTACTGGACGAGGA
CGGGGTGGTCAAGCTGAATGATCTCAACCGTTGCCGGTTTATGGGCCGGG
ACGCGGAGGGGAACCCTTGCCCCTTTAGGATCAACAAGGGGAACGGCGTG
TGGAGGTCTCCTGAAGAGTTCGCAGGGGAGCCTCAGACGGAGAAGCTCGA
CATCTACAGCATGGGTATGATATTCTGGTCCATGTTCGGGAGACAGGCAC
CCTTCGAGCGGGATGATCACCAGCGTTACAAGGATTTGGTGTTAGCCGGG
GTTCGTCCTTTCCTCAAGCCTTCCTGGCACCAGGGTTTCGTTCAGCCTCA
GACGGAGAAGCTCGACATCTACAGCATGGGTATGATATTCTGGTCCATGT
TCGGGAGACAGGCACCCTTCGAGCGGGATGATCACCAGCGTTACAAGGAT
TTGGTGTTAGCCGGGGTTCGTCCTTTCCTCAAGCCTTCCTGGCACCAGGG
TTTCGTTCAGCTCTTCCAAGACATGTGGGCGGGGGATCCCATGGAGAGAC
CGACTGCTGCTGAGGTTGTTCAGCGCTTGGAGGAAATGCTGACAGAATTG
GAGGGGACACAACGAACTCGACAACGAAGGGCAGCCGTCAGCGACAGCTG
TTCCTCTTAACTCTTCCAAGACATGTGGGCGGGGGATCCCATGGAGAGAC
CGACTGCTGCTGAGGTTGTTCAGCGCTTGGAGGAAATGCTGACAGAATTG
GAGGGGACACAACGAACTCGACAACGAAGGGCAGCCGTCAGCGACAGCTG
TTCCTCTTAA
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